Pregenerated sensors for LDLRAD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024544Ensembl transcript IDs: ENSMUST00000063775.5
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATGGAAGTTTaGATCGTGTTTCCATCTTGTTTGCATGCAATTCCCGTGAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LPQGEHCLWSNWMEV*IVFPSCLHAIPVKG Trigger: TCCTTTCACGGGAATTGCATGCAAACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CCA 90 bp | AATTCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTaGTTTTACTTGGCTGTACCAGTAAAGCTGGACAACACTGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: NSRERKQKRRPCLHI*FYLAVPVKLDNTVA Trigger: TGCCACAGTGTTGTCCAGCTTTACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR GCA 90 bp | GTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTTGCATaGAATTCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTTGCAC | + |
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Preference number: 1 (lower is better) Translates to: VKLDGSLNRVSILFA*NSRERKQKRRPCLH Trigger: GTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCAAACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR TCA 90 bp | TGGAAGTTTGAATCGTGTTTCCATCTTGTTTGCATGCAATTCCCGTaGAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: WKFESCFHLVCMQFP*KEAETKTVFAHLVL Trigger: TAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCAAACAAGATGGAAACACGATTCAAACTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGGCTGTACCAGTACAACACTGTGGCAGTaGGGCCAGCGGGCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EAETKTVFAHLVLLGCTSTTLWQ*GQRASL Trigger: GAGAGAGGCCCGCTGGCCCCACTGCCACAGTGTTGT...ACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CAA 90 bp | GAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTaGGCTGTACCAGTAAAGCTGGACAACACTGTGGCAGTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: ERKQKRRPCLHIWFY*AVPVKLDNTVAVGP Trigger: TGGCCCCACTGCCACAGTGTTGTCCAGCTTTACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR GCA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTGGGCCTCTCTCTCCCTaGCGCGGTTTCTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NTVCGQTGWKFESCFHLVGPLSP*RGFSLL Trigger: AAGGAGAGAGAAACCGCGGCAGGGAGAGAGAGGCCC...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR TCA 90 bp | ACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCAAATTCTTGCAACACGGTTTCTCTCTCCTTaGAAAGTGCACTCTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TSPNTSVVHGFWLQILATRFLSP*KVHSRG Trigger: CCCTCTAGAGTGCACTTTTCAAGGAGAGAGAAACCG...TGTTGCAAGAATTTGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTTCCATCTTGTTTGCATaGAATTCCCGTGAAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASLFTNLSKYLSSTRLLASILFA*NSRERK Trigger: CTTCCTTTCACGGGAATTGCATGCAAACAAGATGGA...AGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CAA 90 bp | TTTGCATGCAATTCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTaGCACATTTGGTTTTACTTGGCTGTACCAGTAAAGCTGGACAAC | + |
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Preference number: 2 (lower is better) Translates to: FACNSRERKQKRRPC*HIWFYLAVPVKLDN Trigger: GTTGTCCAGCTTTACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR TCA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATTGCATGCAATTCCCGTaGAAGGAAGCAGAAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: QIPFLYDSVDTQECFLGHCMQFP*KEAETK Trigger: CTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCA...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CAA 90 bp | TACATTAACTTGGTAAACACCAGGGTACATTGCCAAATACCTTTCTaGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: YINLVNTRVHCQIPF*YDSVDTQECFLGHG Trigger: ACCATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTGGCAATGTACCCTGGTGTTTACCAAGTTAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CCA 90 bp | CACGGTTCCCTCATCCATATGTTAAACATTGAGATAGTGCAACTCTTAAAACATGGTGAACACTGTCTGTaGTCAAACTGGATGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: HGSLIHMLNIEIVQLLKHGEHCL*SNWMEV Trigger: AACTTCCATCCAGTTTGACCACAGACAGTGTTCACC...ATGTTTTAAGAGTTGCACTATCTCAATGTTTAACATATGGATGAGGGAACCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR TCA 72 bp | ACTGCTGACCCTGCTGGGAAAAAGACTAGCTGTGCGTaGCACTCCGTACACAGTGTAAGCATCTCTTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: TADPAGKKTSCA*HSVHSVSISFH Trigger: GTGAAAAGAGATGCTTACACTGTGTACGGAGTGTCACGCACAGCTAGTCTTTTTCCCAGCAGGGTCAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CCA 72 bp | TGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATaGAAGTTTGAATCGTGTTTCCATCTTGTTTGCATG | + |
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Preference number: 3 (lower is better) Translates to: CPKVNTVCGQTG*KFESCFHLVCM Trigger: CATGCAAACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CAA 90 bp | ACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCAAATTCTTGCAACAAATCGTGTTTCCATCTaGTTTGCATGCAATTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: TSPNTSVVHGFWLQILATNRVSI*FACNSR Trigger: ACGGGAATTGCATGCAAACAAGATGGAAACACGATT...TGTTGCAAGAATTTGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR TCA 72 bp | GAATCGTGTTTCCATCTTGTTTGCATGCAATTCCCGTaGAAGGAAGCAGAAACGAAGACCGTGTTTGCACAT | + |
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Preference number: 3 (lower is better) Translates to: ESCFHLVCMQFP*KEAETKTVFAH Trigger: ATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCAAACAAGATGGAAACACGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR TCA 72 bp | GGTGAACACTGTCTGTGGTCAAACTGGATGGAAGTTTaGATCGTGTTTCCATCTTGTTTGCATGCAATTCCC | + |
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Preference number: 3 (lower is better) Translates to: GEHCLWSNWMEV*IVFPSCLHAIP Trigger: GGGAATTGCATGCAAACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR TCA 72 bp | AAACACCAGGGTACATTGCCAAATACCTTTCTTGTATaGCTCTGTGGACACTCAAGAGTGTTTCCTTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: KHQGTLPNTFLV*LCGHSRVFPWA Trigger: TGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTGGCAATGTACCCTGGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR GCA 72 bp | GATGGAAGTTTGAATCGTGTTTCCATCTTGTTTGCATaGAATTCCCGTGAAAGGAAGCAGAAACGAAGACCG | + |
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Preference number: 3 (lower is better) Translates to: DGSLNRVSILFA*NSRERKQKRRP Trigger: CGGTCTTCGTTTCTGCTTCCTTTCACGGGAATTGCATGCAAACAAGATGGAAACACGATTCAAACTTCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CCA 72 bp | GAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTaGTTTTACTTGGCTGTACCAGTAAAGCTGGACAAC | + |
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Preference number: 3 (lower is better) Translates to: ERKQKRRPCLHI*FYLAVPVKLDN Trigger: GTTGTCCAGCTTTACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CAA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATAAACGAAGACCGTGTTaGCACATTTGGTTTTACTTG | + |
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Preference number: 3 (lower is better) Translates to: QIPFLYDSVDTQECFLGHKRRPC*HIWFYL Trigger: CAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTT...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CAA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATATAAGTTTCACACCTTaGGAGAAAAAGCAAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: QIPFLYDSVDTQECFLGHISFTP*EKKQTG Trigger: GCCAGTTTGCTTTTTCTCCAAAGGTGTGAAACTTAT...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CAA 90 bp | AAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATGATCCGCAGTCTCCTTTaGGAATCAAATATGTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: KYLSCMTLWTLKSVSLGMIRSLL*ESNMSK Trigger: TTTTGACATATTTGATTCCAAAAGGAGACTGCGGAT...CATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR-3UTR CAA 90 bp | CACGGTTCCCTCATCCATATGTTAAACATTGAGATAGTGCAACTCTTAAAACATTCCAACTTTAAAACCTaGGCACACCAAACAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: HGSLIHMLNIEIVQLLKHSNFKT*AHQTGV Trigger: AACTCCTGTTTGGTGTGCCAAGGTTTTAAAGTTGGA...ATGTTTTAAGAGTTGCACTATCTCAATGTTTAACATATGGATGAGGGAACCGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | TCCATCCACCCCCTGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATGGAAGTTCGGCTGAAACTGTaGTCTGCTGCCCCTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SIHPLPQGEHCLWSNWMEVRLKL*SAAPVC Trigger: ACACACAGGGGCAGCAGACCACAGTTTCAGCCGAAC...TTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCAGGGGGTGGATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR TCA 90 bp | TCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCAGGCACACATGATCTCTaGAGCCCCTGGGCGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SLFTNLSKYLSSTRLLAAGTHDL*SPWALH Trigger: GTGCAGCGCCCAGGGGCTTCAGAGATCATGTGTGCC...TGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTTGCATGATGCCCGGCGGTGGGTaGTCGGTCACCAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VCGQTGWKFESCFHLVCMMPGGG*SVTRRQ Trigger: CTGCCTCCTGGTGACCGAGCACCCACCGCCGGGCAT...CATGCAAACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGGCTGTACCAGTGAAGATGCCCGGCGGTaGGTGCTCGGTCACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EAETKTVFAHLVLLGCTSEDARR*VLGHQE Trigger: CTCCTGGTGACCGAGCACCCACCGCCGGGCATCTTC...ACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | TCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGCCGTCCTCCTGTCTCTaGCTCTGGTTGGGGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SRERKQKRRPCLHIWFYLPSSCL*LWLGRL Trigger: CAACCGCCCCAACCAGAGCCAGAGACAGGAGGACGG...CAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | GCATCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCTGAAACTGTGGTCTaGTGCCCCTGTGTGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: ASLFTNLSKYLSSTRLLAAETVV*CPCVCC Trigger: GCAACACACACAGGGGCAGCAGACCACAGTTTCAGC...AGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | TCCATCCACCCCCTGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATGGAACTGGAAACGACTGAATaGATCCCTCTGGATGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SIHPLPQGEHCLWSNWMELETTE*IPLDER Trigger: TCTTTCATCCAGAGGGATCCATTCAGTCGTTTCCAG...TTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCAGGGGGTGGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTGAAGCCCCTGGGCGCTaGACGGAGCTATCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: NTVCGQTGWKFESCFHLVEAPGR*TELSEG Trigger: GCCTTCTGATAGCTCCGTGCAGCGCCCAGGGGCTTC...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATCGGTTGAGTTCCATCTaGTGCTCTGGGTCCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QIPFLYDSVDTQECFLGHRLSSI*CSGSRS Trigger: GCTCCGGGACCCAGAGCAGCAGATGGAACTCAACCG...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | CGTGAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGGCTTCCTGTCTCTGGCTCTaGTTGGGGCGGTTGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: RERKQKRRPCLHIWFYLASCLWL*LGRLMK Trigger: CTTCATCAACCGCCCCAACCAGAGCCAGAGACAGGA...AGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATCAAAAACGGTTCGATTaGGCGGGGCCCTCACGGACT | + |
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Preference number: 4 (lower is better) Translates to: QIPFLYDSVDTQECFLGHQKRFD*AGPSRT Trigger: AGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTG...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | AAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATGGAAGAACGAGGTGCCTaGGTAGTGGCCCATCACCTC | + |
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Preference number: 4 (lower is better) Translates to: KYLSCMTLWTLKSVSLGMEERGA*VVAHHL Trigger: GAGGTGATGGGCCACTACCCAGGCACCTCGTTCTTC...CATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR TCA 90 bp | TCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCATACTATTGTGCCCTCTaGGTTGTTCGGCTGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SLFTNLSKYLSSTRLLAAYYCAL*VVRLKL Trigger: CAGTTTCAGCCGAACAACTCAGAGGGCACAATAGTA...TGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | AATTCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACGATGGAAGAACGAGGTaGCTGGGTAGTGGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: NSRERKQKRRPCLHIWFYDGRTR*LGSGPS Trigger: TGATGGGCCACTACCCAGGCACCTCGTTCTTCCATC...GTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR TCA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTTCACGGACTCTCGGTTaGGTTCCATCTGCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NTVCGQTGWKFESCFHLVSRTLG*VPSAAL Trigger: CAGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGA...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR GCA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTTTGAGTTCCATCTGCTaGTCTGGGTCCCGGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NTVCGQTGWKFESCFHLVLSSIC*SGSRSC Trigger: ACAGCTCCGGGACCCAGAGCAGCAGATGGAACTCAA...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGGCTGTACCAGTCCACAGTCGTTCTGTTaGTTACAGACCAGAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: EAETKTVFAHLVLLGCTSPQSFC*LQTREP Trigger: TGGTTCTCTGGTCTGTAACCAACAGAACGACTGTGG...ACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR TCA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTTCCTGTCTTTGCCCTTaGTGGGTACTATTGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NTVCGQTGWKFESCFHLVSCLCP*WVLLCP Trigger: AGGGCACAATAGTACCCATCAAGGGCAAAGACAGGA...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| 3UTR CAA 72 bp | AATTCCCGTGAAAGGAAGCAGAAACGAAGACCGTGTTaGCACATTTGGTTTTACTTGGCTGTACCAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: NSRERKQKRRPC*HIWFYLAVPVK Trigger: CTTTACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTCCTTTCACGGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CCA 90 bp | GAAGGCCACAGGGATCCTTCCGGCTGCAGCCCGTCCTCCTGTCTCTaGCTCTGGTTGGGGCGGTTGATGAAGGAGCGTGTGGAGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: EGHRDPSGCSPSSCL*LWLGRLMKERVETL Trigger: CAAAGTCTCCACACGCTCCTTCATCAACCGCCCCAACCAGAGCCAGAGACAGGAGGACGGGCTGCAGCCGGAAGGATCCCTGTGGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS TCA 90 bp | TGTCAAAAACGGTTCGATTGGGCGGGGCCCTCACGGACTCTCGGTTaGGTTCCATCTGCTGCTCTGGGTCCCGGAGCTGTAGCGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CQKRFDWAGPSRTLG*VPSAALGPGAVACR Trigger: CCTGCACGCTACAGCTCCGGGACCCAGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 90 bp | ATCTGCGCGAATTCCAGCTCGGAGTTGAAGATGCCCGGCGGTGGGTaGTCGGTCACCAGGAGGCAGTTCTCTTCGTCACTGTTGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: ICANSSSELKMPGGG*SVTRRQFSSSLLSP Trigger: TGGGGACAACAGTGACGAAGAGAACTGCCTCCTGGTGACCGAGCACCCACCGCCGGGCATCTTCAACTCCGAGCTGGAATTCGCGCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | TCCATCCACCCCCTGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATGGAATCAAAAACGGTTCGATaGGGCGGGGCCCTCACGGAC | + |
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Preference number: 5 (lower is better) Translates to: SIHPLPQGEHCLWSNWMESKTVR*GGALTD Trigger: GTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGA...TTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCAGGGGGTGGATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | GCATCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTTGCCCGAGTGGCTGCTaGGTGGGCATGGTCCCCCGT | + |
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Preference number: 5 (lower is better) Translates to: ASLFTNLSKYLSSTRLLACPSGC*VGMVPR Trigger: ACGGGGGACCATGCCCACCAAGCAGCCACTCGGGCA...AGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 90 bp | GTACTATTGTGCCCTCTGAGTTGTTCGGCTGAAACTGTGGTCTGCTaGCCCTGTGTGTGTTGCTGTGCTGGTGATGGAAGAACGAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLLCPLSCSAETVVC*PCVCCCAGDGRTRC Trigger: GCACCTCGTTCTTCCATCACCAGCACAGCAACACACACAGGGGCAGCAGACCACAGTTTCAGCCGAACAACTCAGAGGGCACAATAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 90 bp | TGGGTACTATTGTGCCCTCTGAGTTGTTCGGCTGAAACTGTGGTCTaGTGCCCCTGTGTGTGTTGCTGTGCTGGTGATGGAAGAACGAGG | + |
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Preference number: 5 (lower is better) Translates to: WVLLCPLSCSAETVV*CPCVCCCAGDGRTR Trigger: CCTCGTTCTTCCATCACCAGCACAGCAACACACACAGGGGCAGCAGACCACAGTTTCAGCCGAACAACTCAGAGGGCACAATAGTACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CCA 90 bp | GTAGGTGGGCTGGAAACGACTGAATGGATCCCTCTGGATGAAAGATaGGGTAGTAAACCTATCCCTGCCCCGTGGGGCACACATGATCTC | + |
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Preference number: 5 (lower is better) Translates to: VGGLETTEWIPLDER*GSKPIPAPWGTHDL Trigger: GAGATCATGTGTGCCCCACGGGGCAGGGATAGGTTTACTACCCCATCTTTCATCCAGAGGGATCCATTCAGTCGTTTCCAGCCCACCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | TCCATCCACCCCCTGCCCCAAGGTGAACACTGTCTGTGGTCAAACTGGATGGAACTGGTGCAGGTGAATTaGCACTCTGTGAACGCATTT | + |
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Preference number: 5 (lower is better) Translates to: SIHPLPQGEHCLWSNWMELVQVN*HSVNAF Trigger: AAATGCGTTCACAGAGTGCAAATTCACCTGCACCAG...TTCCATCCAGTTTGACCACAGACAGTGTTCACCTTGGGGCAGGGGGTGGATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | ACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCAAATTCTTGCAACATGTCTCTGGCTCTGGTaGGGGCGGTTGATGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSPNTSVVHGFWLQILATCLWLW*GRLMKE Trigger: CTCCTTCATCAACCGCCCCAACCAGAGCCAGAGACA...TGTTGCAAGAATTTGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTCACCAACCTCTCCAAATACCTCAGTAGTACACGGCTTCTGGCTGCACCCACAGTCGTTCTGTaGGTTACAGACCAGAGAACC | + |
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Preference number: 5 (lower is better) Translates to: SLFTNLSKYLSSTRLLAAPTVVL*VTDQRT Trigger: GGTTCTCTGGTCTGTAACCAACAGAACGACTGTGGG...TGCAGCCAGAAGCCGTGTACTACTGAGGTATTTGGAGAGGTTGGTGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | AACACTGTCTGTGGTCAAACTGGATGGAAGTTTGAATCGTGTTTCCATCTTGTTCTCACGGACTCTCGGTaGAGTTCCATCTGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: NTVCGQTGWKFESCFHLVLTDSR*SSICCS Trigger: AGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGAG...AACAAGATGGAAACACGATTCAAACTTCCATCCAGTTTGACCACAGACAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | GAAGCAGAAACGAAGACCGTGTTTGCACATTTGGTTTTACTTGGCTGTACCAGTTTCCTGTCTTTGCCCTaGATGGGTACTATTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: EAETKTVFAHLVLLGCTSFLSLP*MGTIVP Trigger: GGGCACAATAGTACCCATCAAGGGCAAAGACAGGAA...ACTGGTACAGCCAAGTAAAACCAAATGTGCAAACACGGTCTTCGTTTCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS-3UTR CAA 90 bp | CAAATACCTTTCTTGTATGACTCTGTGGACACTCAAGAGTGTTTCCTTGGGCATCCCGGCTTCCTGTCTTaGCCCTTGATGGGTACTATT | + |
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Preference number: 5 (lower is better) Translates to: QIPFLYDSVDTQECFLGHPGFLS*PLMGTI Trigger: AATAGTACCCATCAAGGGCAAAGACAGGAAGCCGGG...ATGCCCAAGGAAACACTCTTGAGTGTCCACAGAGTCATACAAGAAAGGTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | GGCGGGGCCCTCACGGACTCTCGGTTGAGTTCCATCTaGTGCTCTGGGTCCCGGAGCTGTAGCGTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGALTDSRLSSI*CSGSRSCSVQG Trigger: ACCCTGCACGCTACAGCTCCGGGACCCAGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | GGGGCCCTCACGGACTCTCGGTTGAGTTCCATCTGCTaGTCTGGGTCCCGGAGCTGTAGCGTGCAGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GALTDSRLSSIC*SGSRSCSVQGP Trigger: AGGACCCTGCACGCTACAGCTCCGGGACCCAGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CCA 72 bp | CCTTCCGGCTGCAGCCCGTCCTCCTGTCTCTGGCTCTaGTTGGGGCGGTTGATGAAGGAGCGTGTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: PSGCSPSSCLWL*LGRLMKERVET Trigger: AGTCTCCACACGCTCCTTCATCAACCGCCCCAACCAGAGCCAGAGACAGGAGGACGGGCTGCAGCCGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 90 bp | CTGTCAAAAACGGTTCGATTGGGCGGGGCCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGCTCTGGGTCCCGGAGCTGTAGCGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSKTVRLGGALTDSR*SSICCSGSRSCSVQ Trigger: CTGCACGCTACAGCTCCGGGACCCAGAGCAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | AATTCCAGCTCGGAGTTGAAGATGCCCGGCGGTGGGTaGTCGGTCACCAGGAGGCAGTTCTCTTCGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: NSSSELKMPGGG*SVTRRQFSSSL Trigger: CAGTGACGAAGAGAACTGCCTCCTGGTGACCGAGCACCCACCGCCGGGCATCTTCAACTCCGAGCTGGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 90 bp | ACCACCACAACAATGATAAGGATCTGCGCGAATTCCAGCTCGGAGTaGAAGATGCCCGGCGGTGGGTGCTCGGTCACCAGGAGGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: TTTTMIRICANSSSE*KMPGGGCSVTRRQF Trigger: GAACTGCCTCCTGGTGACCGAGCACCCACCGCCGGGCATCTTCAACTCCGAGCTGGAATTCGCGCAGATCCTTATCATTGTTGTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 72 bp | ACAATGATAAGGATCTGCGCGAATTCCAGCTCGGAGTaGAAGATGCCCGGCGGTGGGTGCTCGGTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TMIRICANSSSE*KMPGGGCSVTR Trigger: CCTGGTGACCGAGCACCCACCGCCGGGCATCTTCAACTCCGAGCTGGAATTCGCGCAGATCCTTATCATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | TGCCCTCTGAGTTGTTCGGCTGAAACTGTGGTCTGCTaGCCCTGTGTGTGTTGCTGTGCTGGTGATGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CPLSCSAETVVC*PCVCCCAGDGR Trigger: TCTTCCATCACCAGCACAGCAACACACACAGGGGCAGCAGACCACAGTTTCAGCCGAACAACTCAGAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | TTGTGCCCTCTGAGTTGTTCGGCTGAAACTGTGGTCTaGTGCCCCTGTGTGTGTTGCTGTGCTGGTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: LCPLSCSAETVV*CPCVCCCAGDG Trigger: TCCATCACCAGCACAGCAACACACACAGGGGCAGCAGACCACAGTTTCAGCCGAACAACTCAGAGGGCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS GCA 72 bp | ACCATCACCGTCACCACCACAACAATGATAAGGATCTaGGCGAATTCCAGCTCGGAGTTGAAGATGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: TITVTTTTMIRI*ANSSSELKMPG Trigger: GCCGGGCATCTTCAACTCCGAGCTGGAATTCGCGCAGATCCTTATCATTGTTGTGGTGGTGACGGTGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CCA 72 bp | CTGGAAACGACTGAATGGATCCCTCTGGATGAAAGATaGGGTAGTAAACCTATCCCTGCCCCGTGGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LETTEWIPLDER*GSKPIPAPWGT Trigger: TGTGCCCCACGGGGCAGGGATAGGTTTACTACCCCATCTTTCATCCAGAGGGATCCATTCAGTCGTTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 72 bp | GAAATGTCTATCAAGTCACTGTCAAAAACGGTTCGATaGGGCGGGGCCCTCACGGACTCTCGGTTGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: EMSIKSLSKTVR*GGALTDSRLSS Trigger: GGAACTCAACCGAGAGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGACAGTGACTTGATAGACATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 90 bp | TTGTACATAGAAATGTCTATCAAGTCACTGTCAAAAACGGTTCGATaGGGCGGGGCCCTCACGGACTCTCGGTTGAGTTCCATCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYIEMSIKSLSKTVR*GGALTDSRLSSICC Trigger: GCAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGACAGTGACTTGATAGACATTTCTATGTACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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| CDS CAA 72 bp | ATGCCCGAGTGGCTGCTTGGTGGGCATGGTCCCCCGTaGTACATAGAAATGTCTATCAAGTCACTGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MPEWLLGGHGPP*YIEMSIKSLSK Trigger: TTTTGACAGTGACTTGATAGACATTTCTATGTACAACGGGGGACCATGCCCACCAAGCAGCCACTCGGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063775.5 |
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