Pregenerated sensors for LDLRAD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048058Ensembl transcript IDs: ENSMUST00000058790.12, ENSMUST00000111222.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGTCTGGCCAGGCCTGACCCTCACTCTAACCCTAACCCTGACTTaGTGCACTGTCCTGGGGGTTGTGTGTGTAGTACAGGGACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: DVWPGLTLTLTLTLT*CTVLGVVCVVQGPE Trigger: CTCAGGTCCCTGTACTACACACACAACCCCCAGGACAGTGCACCAAGTCAGGGTTAGGGTTAGAGTGAGGGTCAGGCCTGGCCAGACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR GCA 90 bp | GTCTGGCCAGGCCTGACCCTCACTCTAACCCTAACCCTGACTTGGTaGACTGTCCTGGGGGTTGTGTGTGTAGTACAGGGACCTGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: VWPGLTLTLTLTLTW*TVLGVVCVVQGPEN Trigger: ATTCTCAGGTCCCTGTACTACACACACAACCCCCAGGACAGTGCACCAAGTCAGGGTTAGGGTTAGAGTGAGGGTCAGGCCTGGCCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CCA 90 bp | CCTGGTTGGTGGGGGTGCGTGGTGGTGGCATGCACTAGGACTGGCTaGGCATCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: PGWWGCVVVACTRTG*ASRRRKGNPNKQWM Trigger: CATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CCA 90 bp | GAAGCGGGGACCCATCAAAGGAAGGGAAGAGCGACTCTGACTCACTaGGATGAGATGTGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: EAGTHQRKGRATLTH*DEMCSQKSSVCHPG Trigger: ACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCACATCTCATCCCAGTGAGTCAGAGTCGCTCTTCCCTTCCTTTGATGGGTCCCCGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR GCA 90 bp | GTTTACCCATTATTGCCTGGTTGGTGGGGGTGCGTGGTGGTGGCATaGACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATCCA | + |
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Preference number: 1 (lower is better) Translates to: VYPLLPGWWGCVVVA*TRTGWASRRRKGNP Trigger: TGGATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR GCA 90 bp | TCCCTAGTTAGTATGGTTTACCCATTATTGCCTGGTTGGTGGGGGTaGGTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SLVSMVYPLLPGWWG*VVVACTRTGWASRR Trigger: CCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAACCATACTAACTAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | GGGGACCCATCAAAGGAAGGGAAGAGCGACTCTGACTCACTGGGATaGGATGTGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: GDPSKEGKSDSDSLG*DVQPEKLCLPPRFF Trigger: AAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCACATCTCATCCCAGTGAGTCAGAGTCGCTCTTCCCTTCCTTTGATGGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | TCAAGGACGTTGCTGAGGCTCTGCCCTTCTAGAAAGATCTCAGAATaGGGACTCTTGGGCAAGTCTGTAAGGCCAGGGTGGAGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SRTLLRLCPSRKISE*GLLGKSVRPGWRFL Trigger: CAGAAACCTCCACCCTGGCCTTACAGACTTGCCCAAGAGTCCTCATTCTGAGATCTTTCTAGAAGGGCAGAGCCTCAGCAACGTCCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | CTAGGAACTCATGCCAGGGGCTTCCTACTTATTCAAGGACGTTGCTaGGGCTCTGCCCTTCTAGAAAGATCTCAGAATGAGGACTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LGTHARGFLLIQGRC*GSALLERSQNEDSW Trigger: CCAAGAGTCCTCATTCTGAGATCTTTCTAGAAGGGCAGAGCCTCAGCAACGTCCTTGAATAAGTAGGAAGCCCCTGGCATGAGTTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | CCAGTCATAAGACTACTGGAATGGACCAACAATCGCACAGTCATCTaGAGTAGGAGTCTGTTAATCACAGGCCCTGAAGGAACAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: PVIRLLEWTNNRTVI*SRSLLITGPEGTVT Trigger: AGTCACTGTTCCTTCAGGGCCTGTGATTAACAGACTCCTACTTCAGATGACTGTGCGATTGTTGGTCCATTCCAGTAGTCTTATGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CCA 90 bp | CAAGGAAGTTGCATGGATGAACATGCCAGACTGGGTCTGTTTTCCTaGGGCAAACGGTTAGATCAGAATTTTGACCGGCTTAATTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QGSCMDEHARLGLFS*GKRLDQNFDRLNLG Trigger: ACCCAAATTAAGCCGGTCAAAATTCTGATCTAACCGTTTGCCCCAGGAAAACAGACCCAGTCTGGCATGTTCATCCATGCAACTTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | ATCGAACAGGTTATTGAAACTTTTGTTAGCAGTGGAAAAATGCTTTaGATGGGTGGCAGCTGCCTGAGGTGGCACCATCTGGTTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: IEQVIETFVSSGKML*MGGSCLRWHHLVPV Trigger: AACTGGAACCAGATGGTGCCACCTCAGGCAGCTGCCACCCATTCAAAGCATTTTTCCACTGCTAACAAAAGTTTCAATAACCTGTTCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CCA 90 bp | CCCAGTGTAGATGCTCAGCGTGTATGTGAGTCTGAGGTGACATTATaGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PSVDAQRVCESEVTL*DGMGKAAFLFASFF Trigger: AAAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACCTCAGACTCACATACACGCTGAGCATCTACACTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR TCA 90 bp | ATTTCAACTGGAGACATCCTCAAAAGGAGCTCAAAGAGTGTCCCATaGGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCC | + |
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Preference number: 1 (lower is better) Translates to: ISTGDILKRSSKSVP*AQSDRIQQVGEDLP Trigger: GGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGACACTCTTTGAGCTCCTTTTGAGGATGTCTCCAGTTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CCA 90 bp | TTTGTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTaGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: FVRILQTKSPNVSIS*QLSRDSGLMSSDLL Trigger: CAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGGGTGGGGGTGCGTGGTaGTGGCATGCACTAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRGGGAW*WHALGL Trigger: CAGTCCTAGTGCATGCCACCACCACGCACCCCCACC...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTGGGTGGCAGCTGCCTaGGGTGGCACCATCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHWVAAA*GGTIWF Trigger: GAACCAGATGGTGCCACCTCAGGCAGCTGCCACCCA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTTATTGCCTGGTTGGTaGGGGTGCGTGGTGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHLLPGW*GCVVVA Trigger: TGCCACCACCACGCACCCCCACCAACCAGGCAATAA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCAGCCCTGAAGGAACAGTaGCTGTGCAGAGAAAGACGG | + |
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Preference number: 2 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAALKEQ*LCRERR Trigger: CCGTCTTTCTCTGCACAGTCACTGTTCCTTCAGGGC...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATTCTGAGGTGACATTATaGGATGGGATGGGAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VVVACTRTGWASRRRKGNSEVTL*DGMGKA Trigger: TGCCTTTCCCATCCCATCCCATAATGTCACCTCAGA...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATTCCAAAGAACATCCCTaGAATCTGGAGGAGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: VVVACTRTGWASRRRKGNSKEHP*NLEEKV Trigger: TACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGA...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATTGTAGTACAGGGACCTaGGAATTCTCATGGATGGTA | + |
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Preference number: 2 (lower is better) Translates to: VVVACTRTGWASRRRKGNCSTGT*EFSWMV Trigger: TACCATCCATGAGAATTCTCAGGTCCCTGTACTACA...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGATGAACATGCCAGACTaGGTCTGTTTTCCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRMNMPD*VCFPGA Trigger: TGCCCCAGGAAAACAGACCCAGTCTGGCATGTTCAT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATCAGGGTGGAGGTTTCTaGGTCTTTCATAAAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: VVVACTRTGWASRRRKGNQGGGF*VFHKTK Trigger: TTTGGTTTTATGAAAGACTCAGAAACCTCCACCCTG...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGTCTCTCAGGAGAAACTaGCAGATGTCTGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLSLRRN*QMSGQA Trigger: GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGA...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGACAAACAGTGGATGGTaGACTTGTCTCTGCGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRTNSGW*TCLCVS Trigger: AGACACGCAGAGACAAGTCCACCATCCACTGTTTGT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGATCAAGGAAGTTGCATaGATGAACATGCCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRIKEVA*MNMPDW Trigger: CCAGTCTGGCATGTTCATCCATGCAACTTCCTTGAT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTGCCCTGAAGGAACAGTaGCTGTGCAGAGAAAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GDIMGWDGKGSISFCIFLALKEQ*LCRERR Trigger: CCGTCTTTCTCTGCACAGTCACTGTTCCTTCAGGGC...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGAACATCCCTGAAATCTaGAGGAGAAGGTATAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRNIPEI*RRRYSE Trigger: CTCACTATACCTTCTCCTCCAGATTTCAGGGATGTT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGAATCGCACAGTCATCTaGAGTAGGAGTCTGTTAATC | + |
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Preference number: 2 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVNRTVI*SRSLLI Trigger: GATTAACAGACTCCTACTTCAGATGACTGTGCGATT...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCACAGGGTGGAGGTTTCTaGGTCTTTCATAAAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAQGGGF*VFHKTK Trigger: TTTGGTTTTATGAAAGACTCAGAAACCTCCACCCTG...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTATCTGTTGCCCACTTCTCTCAGGAGAAACTGCCAGATGTCTGGCCAGGCCTCTCATGGATGGTATTaGATGTGGTTCTCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: IYLLPTSLRRNCQMSGQASHGWY*MWFSCK Trigger: CTTACATGAGAACCACATTCAATACCATCCATGAGA...GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGAAGTGGGCAACAGATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCAATCCTGTTAACTAAGTaGCTGGAGGAGTGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: MCDMALEPCQRLFTYMASILLTK*LEECQV Trigger: GACCTGGCACTCCTCCAGCCACTTAGTTAACAGGAT...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGTCCAAAGAACATCCCTaGAATCTGGAGGAGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLSKEHP*NLEEKV Trigger: TACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGA...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTATCCTGTTAACTAAGTaGCTGGAGGAGTGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GDIMGWDGKGSISFCIFLILLTK*LEECQV Trigger: GACCTGGCACTCCTCCAGCCACTTAGTTAACAGGAT...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGATGTCCAAATGCACATaGACAATAGGCTCCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLMSKCT*TIGSQV Trigger: CACTTGGGAGCCTATTGTCCATGTGCATTTGGACAT...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CAA 90 bp | AGAGTTTGGAGAGTTGAAAGCTGTTGCTCATGCCAGAGATTTTCTTaGGCCTCTGCTGGAGTAAGATCGATGCATAGGAGAGTACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: RVWRVESCCSCQRFS*ASAGVRSMHRRVQN Trigger: GTTTTGTACTCTCCTATGCATCGATCTTACTCCAGCAGAGGCCAAAGAAAATCTCTGGCATGAGCAACAGCTTTCAACTCTCCAAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTTGGTCTGATGTCTTCTaGCCTCCTGAATGTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: GDIMGWDGKGSISFCIFLWSDVF*PPECVT Trigger: TGTCACACATTCAGGAGGTCAGAAGACATCAGACCA...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTTCTTTGGACCTCACTaGAAGAGAAATAAGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHFFGPH*KRNKKS Trigger: GCTTTTCTTATTTCTCTTTCAGTGAGGTCCAAAGAA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGATGGCCCTAGAACCCTaGCAAAGACTATTTACATAC | + |
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Preference number: 2 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLMALEP*QRLFTY Trigger: GTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCAT...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGAACCAAACTAGAGTTTaGAGAGTTGAAAGCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLNQTRV*RVESCC Trigger: GCAACAGCTTTCAACTCTCCAAACTCTAGTTTGGTT...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTATCAAGGAAGTTGCATaGATGAACATGCCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: GDIMGWDGKGSISFCIFLIKEVA*MNMPDW Trigger: CCAGTCTGGCATGTTCATCCATGCAACTTCCTTGAT...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTTGGTCTGATGTCTTCTaGCCTCCTGAATGTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: VRILQTKSPNVSISWQLSWSDVF*PPECVT Trigger: TGTCACACATTCAGGAGGTCAGAAGACATCAGACCA...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACATAAGACTACTGGAATaGACCAACAATCGCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NVSISWQLSRDSGLMSSDIRLLE*TNNRTV Trigger: GACTGTGCGATTGTTGGTCCATTCCAGTAGTCTTAT...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAAATCCAATGGGAAATCTTGACTCCAAGATTTATCTGTTGCCCACTTCTCTGTAGTACAGGGACCTaGGAATTCTCATGGATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NKIQWEILTPRFICCPLLCSTGT*EFSWMV Trigger: TACCATCCATGAGAATTCTCAGGTCCCTGTACTACA...GAGAAGTGGGCAACAGATAAATCTTGGAGTCAAGATTTCCCATTGGATTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAAAATCCAATGGGAAATCTTGACTCCAAGATTTATCTGTTGCCCACTTCTCGTCCTTATGTCCAAATaGACATGGACAATAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: NKIQWEILTPRFICCPLLVLMSK*TWTIGS Trigger: GGAGCCTATTGTCCATGTGCATTTGGACATAAGGAC...GAGAAGTGGGCAACAGATAAATCTTGGAGTCAAGATTTCCCATTGGATTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTAACATCCCTGAAATCTaGAGGAGAAGGTATAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VRILQTKSPNVSISWQLSNIPEI*RRRYSE Trigger: CTCACTATACCTTCTCCTCCAGATTTCAGGGATGTT...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTAATGTATCTATAAGTTaGCAGCTCAGTAGAGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: GDIMGWDGKGSISFCIFLNVSIS*QLSRDS Trigger: AGAGTCTCTACTGAGCTGCCAACTTATAGATACATT...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATAACCCTAACCCTGACTaGGTGCACTGTCCTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VVVACTRTGWASRRRKGNNPNPD*VHCPGG Trigger: ACCCCCAGGACAGTGCACCAAGTCAGGGTTAGGGTT...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR GCA 72 bp | AGTATGGTTTACCCATTATTGCCTGGTTGGTGGGGGTaGGTGGTGGTGGCATGCACTAGGACTGGCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SMVYPLLPGWWG*VVVACTRTGWA Trigger: TGCCCAGCCAGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAACCATACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | TGGGGGTGCGTGGTGGTGGCATGCACTAGGACTGGCTaGGCATCAAGGAGGAGGAAAGGTAATCCAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: WGCVVVACTRTG*ASRRRKGNPNK Trigger: TTTGTTTGGATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCACGCACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | AAGCGGGGACCCATCAAAGGAAGGGAAGAGCGACTCTaGCTCACTGGGATGAGATGTGCAGCCAGAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRGPIKGREERL*LTGMRCAARKA Trigger: AGCTTTTCTGGCTGCACATCTCATCCCAGTGAGTCAGAGTCGCTCTTCCCTTCCTTTGATGGGTCCCCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | CTAGTTAGTATGGTTTACCCATTATTGCCTGGTTGGTaGGGGTGCGTGGTGGTGGCATGCACTAGGACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVSMVYPLLPGW*GCVVVACTRTG Trigger: GCCAGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAACCATACTAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | TTGCTGAGGCTCTGCCCTTCTAGAAAGATCTCAGAATaGGGACTCTTGGGCAAGTCTGTAAGGCCAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLRLCPSRKISE*GLLGKSVRPGW Trigger: CCACCCTGGCCTTACAGACTTGCCCAAGAGTCCTCATTCTGAGATCTTTCTAGAAGGGCAGAGCCTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | TCCCTAGTTAGTATGGTTTACCCATTATTGCCTGGTTaGTGGGGGTGCGTGGTGGTGGCATGCACTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SLVSMVYPLLPG*WGCVVVACTRT Trigger: AGTCCTAGTGCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAACCATACTAACTAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACCTATGGCAGGTCATCTaGGAAGGGGACAATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHLWQVI*EGDNPE Trigger: TTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAG...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | CATGCCAGGGGCTTCCTACTTATTCAAGGACGTTGCTaGGGCTCTGCCCTTCTAGAAAGATCTCAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: HARGFLLIQGRC*GSALLERSQNE Trigger: CTCATTCTGAGATCTTTCTAGAAGGGCAGAGCCTCAGCAACGTCCTTGAATAAGTAGGAAGCCCCTGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTGCCAGAGATTTTCTTaGGCCTCTGCTGGAGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHCQRFS*ASAGVR Trigger: TCTTACTCCAGCAGAGGCCAAAGAAAATCTCTGGCA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGCAGGTTCTTTCTTCATaGGGTTACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRQVLSS*GYTHTH Trigger: GTGTGTGTGTGTGTAACCCAATGAAGAAAGAACCTG...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | GACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGTaGCATGGCCCTAGAACCCTGCCAAAGACTATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: DSGLMSSDLLNV*HGPRTLPKTIY Trigger: GTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACATTCAGGAGGTCAGAAGACATCAGACCAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | CACTGTCCTGGGGGTTGTGTGTGTAGTACAGGGACCTaGGAATTCTCATGGATGGTATTGAATGTGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HCPGGCVCSTGT*EFSWMVLNVVL Trigger: GAGAACCACATTCAATACCATCCATGAGAATTCTCAGGTCCCTGTACTACACACACAACCCCCAGGACAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR GCA 72 bp | ACTCTGGTAACCTACACATTAGCAGCTAGGAACTCATaGCAGGGGCTTCCTACTTATTCAAGGACGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLVTYTLAARNS*QGLPTYSRTLL Trigger: CAGCAACGTCCTTGAATAAGTAGGAAGCCCCTGGCATGAGTTCCTAGCTGCTAATGTGTAGGTTACCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | TGCAGAGAAAGACGGCAATGCATCCTGTTAACTAAGTaGCTGGAGGAGTGCCAGGTCATTCCAAAGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: CRERRQCILLTK*LEECQVIPKNI Trigger: GATGTTCTTTGGAATGACCTGGCACTCCTCCAGCCACTTAGTTAACAGGATGCATTGCCGTCTTTCTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGTCCTTATGTCCAAATGCACATGGACAATAGGCTCCCAAGTGTTCATAGACTATGGCAGGTCATCTaGGAAGGGGACAATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TCPYVQMHMDNRLPSVHRLWQVI*EGDNPE Trigger: TTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAG...TCTATGAACACTTGGGAGCCTATTGTCCATGTGCATTTGGACATAAGGACACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | AGACTACTGGAATGGACCAACAATCGCACAGTCATCTaGAGTAGGAGTCTGTTAATCACAGGCCCTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLLEWTNNRTVI*SRSLLITGPEG Trigger: TCCTTCAGGGCCTGTGATTAACAGACTCCTACTTCAGATGACTGTGCGATTGTTGGTCCATTCCAGTAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | ATAGAACTTAGGAGCCTATCAAGGAAGTTGCATGGATaGACATGCCAGACTGGGTCTGTTTTCCTGGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IELRSLSRKLHG*TCQTGSVFLGQ Trigger: TTGCCCCAGGAAAACAGACCCAGTCTGGCATGTTCATCCATGCAACTTCCTTGATAGGCTCCTAAGTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | GTTATTGAAACTTTTGTTAGCAGTGGAAAAATGCTTTaGATGGGTGGCAGCTGCCTGAGGTGGCACCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: VIETFVSSGKML*MGGSCLRWHHL Trigger: CAGATGGTGCCACCTCAGGCAGCTGCCACCCATTCAAAGCATTTTTCCACTGCTAACAAAAGTTTCAATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | GAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTaGAGGAGAAGGTATAGTGAGCACCCCAAAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ECQVIPKNIPEI*RRRYSEHPKIS Trigger: TGAAATTTTGGGGTGCTCACTATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTTCCTGCAGTCTACTTaGGATTTGGTTAAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHFLQST*DLVKKE Trigger: TTCCTTTTTAACCAAATCCAAAGTAGACTGCAGGAA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | CCCCAAGTGGCTAGTTACCTTTCCTGCAGTCTACTTTaGATTTGGTTAAAAAGGAAGTCAGTACAACATCAC | + |
|
Preference number: 3 (lower is better) Translates to: PQVASYLSCSLL*IWLKRKSVQHH Trigger: GTGATGTTGTACTGACTTCCTTTTTAACCAAATCCAAAGTAGACTGCAGGAAAGGTAACTAGCCACTTGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | ATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTaGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILQTKSPNVSIS*QLSRDSGLMSS Trigger: AGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CCA 72 bp | GTTAGAGAAAAACGTGTCCTTATGTCCAAATGCACATaGACAATAGGCTCCCAAGTGTTCATAGAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VREKRVLMSKCT*TIGSQVFIELR Trigger: CCTAAGTTCTATGAACACTTGGGAGCCTATTGTCCATGTGCATTTGGACATAAGGACACGTTTTTCTCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR TCA 72 bp | GTAGTACAGGGACCTGAGAATTCTCATGGATGGTATTaGATGTGGTTCTCATGTAAGTTAGAGAAAAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: VVQGPENSHGWY*MWFSCKLEKNV Trigger: CACGTTTTTCTCTAACTTACATGAGAACCACATTCAATACCATCCATGAGAATTCTCAGGTCCCTGTACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATGTGACGTTGCAGTGGTaGGGGTGGTCCAGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVVACTRTGWASRRRKGNVTLQW*GWSRTT Trigger: GGTGGTCCTGGACCACCCTCACCACTGCAACGTCAC...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATAGAGCCAGGCTGCTCTaGGTTGTGGCTGCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVACTRTGWASRRRKGNRARLL*VVAAGF Trigger: GAAGCCAGCAGCCACAACCCAGAGCAGCCTGGCTCT...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACGGCTCTCCGCAGTGCTaGTCAGCAGCAGGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHGSPQC*SAAGTA Trigger: CGCTGTGCCTGCTGCTGAGCAGCACTGCGGAGAGCC...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCACCACACTCAGGAGGCTaGTGGCTGCCTGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAPHSGG*WLPGSW Trigger: CCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGTGTGG...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGGTGACGTTGCAGTGGTaGGGGTGGTCCAGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVVTLQW*GWSRTT Trigger: GGTGGTCCTGGACCACCCTCACCACTGCAACGTCAC...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAAGGCTCTCCGCAGTGCTaGTCAGCAGCAGGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQEGSPQC*SAAGTA Trigger: CGCTGTGCCTGCTGCTGAGCAGCACTGCGGAGAGCC...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGATGATGCAGGACCAGTaGGAGCAGGGCCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRMMQDQ*EQGHHQ Trigger: CTGGTGGTGGCCCTGCTCGCACTGGTCCTGCATCAT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCACAGGAGGCTGCTGGCTaGCTGGGAGCTGGCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAQEAAG*LGAGTV Trigger: TACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCTG...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTGGAGGAGAAGGTATCCACACTCAGGAGGCTaGTGGCTGCCTGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EECQVIPKNIPEIWRRRYPHSGG*WLPGSW Trigger: CCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGTGTGG...ATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | ATTTATCTGTTGCCCACTTCTCTCAGGAGAAACTGCCAGATGTCTGGCCAGGCCAGAGCCAGGCTGCTCTaGGTTGTGGCTGCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYLLPTSLRRNCQMSGQARARLL*VVAAGF Trigger: GAAGCCAGCAGCCACAACCCAGAGCAGCCTGGCTCT...GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGAAGTGGGCAACAGATAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATTGTTGCACTCGTTGGTaGAGTTGTTCCCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVVACTRTGWASRRRKGNCCTRW*SCSQGA Trigger: TGCTCCCTGGGAACAACTTCACCAACGAGTGCAACA...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTGCCAGGCGCCCGGGATaGACCGCCCGTTGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GDIMGWDGKGSISFCIFLARRPG*TARCCT Trigger: TGTGCAGCAACGGGCGGTGCATCCCGGGCGCCTGGC...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
||
| CDS-3UTR GCA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACGGCAGCCCGTCACACTaGCAGGCGCCCGGGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVSISWQLSRDSGLMSSDGSPSH*QAPGMH Trigger: GTGCATCCCGGGCGCCTGGCAGTGTGACGGGCTGCC...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
||
| CDS-3UTR GCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAATGCACAGGCCGTTCCTaGAGTGGTAGCGAGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQECTGRS*SGSEPW Trigger: CCACGGCTCGCTACCACTGCAGGAACGGCCTGTGCA...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTGGAGGAGAAGGTATGAGAGCAGCACAGGATaGTGCAGCCGGTGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EECQVIPKNIPEIWRRRYESSTG*CSRCTG Trigger: CCCTGTGCACCGGCTGCAGCATCCTGTGCTGCTCTC...ATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTGGAGGAGAAGGTATTTCCCAGGGAGCAGCTaGCTCTCCGCAGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EECQVIPKNIPEIWRRRYFPGSS*LSAVLL Trigger: GAGCAGCACTGCGGAGAGCCAGCTGCTCCCTGGGAA...ATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATTACCATGCAGGTCTTTaGTCCAGCAGGGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVACTRTGWASRRRKGNYHAGL*SSRASE Trigger: TTCAGAGGCCCTGCTGGACCAAAGACCTGCATGGTA...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGGCTGGCTCTCCGCAGTaGTGCTCAGCAGCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLAGSPQ*CSAAGT Trigger: TGTGCCTGCTGCTGAGCAGCACTGCGGAGAGCCAGC...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGAGTTCTCCTCGTCGCTaGCGTCGGGACAGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVSSPRR*RRDSPQ Trigger: TTGAGGACTGTCCCGACGGCAGCGACGAGGAGAACT...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | ATTTATCTGTTGCCCACTTCTCTCAGGAGAAACTGCCAGATGTCTGGCCAGGCCGAGGTCACAAACACCTaGCCGCTGCCTGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYLLPTSLRRNCQMSGQAEVTNT*PLPGSR Trigger: TCTAGAACCAGGCAGCGGGCAGGTGTTTGTGACCTC...GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGAAGTGGGCAACAGATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAAATGATGCAGGACCAGTaGGAGCAGGGCCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQEMMQDQ*EQGHHQ Trigger: CTGGTGGTGGCCCTGCTCGCACTGGTCCTGCATCAT...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAATCTGGAGAGCCAGGCTaGTCTGGGTTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQESGEPG*SGLWLL Trigger: CAGCAGCCACAACCCAGAGCAGCCTGGCTCTCCAGA...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAATGGCTGCCTGGGAGCTaGCACTGTAGGCACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQEWLPGS*HCRHFL Trigger: CAGGAAGTGCCTACAGTGCCAGCTCCCAGGCAGCCA...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTGGAGGAGAAGGTATTGGCTGCCTGGGAGCTaGCACTGTAGGCACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EECQVIPKNIPEIWRRRYWLPGS*HCRHFL Trigger: CAGGAAGTGCCTACAGTGCCAGCTCCCAGGCAGCCA...ATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAACTGGGTTGTGGCTGCTaGCTTCCACACTCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQELGCGC*LPHSGG Trigger: GCCTCCTGAGTGTGGAAGCCAGCAGCCACAACCCAG...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CAA 72 bp | CCAGTTTTGTCCCTAGTTAGTATGGTTTACCCATTATaGCCTGGTTGGTGGGGGTGCGTGGTGGTGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLSLVSMVYPL*PGWWGCVVVAC Trigger: GCATGCCACCACCACGCACCCCCACCAACCAGGCAATAATGGGTAAACCATACTAACTAGGGACAAAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGGAGGTCACAAACACCTaGCCGCTGCCTGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVEVTNT*PLPGSR Trigger: TCTAGAACCAGGCAGCGGGCAGGTGTTTGTGACCTC...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCAAGCAGCACAGGATGCTaGAGCCGGTGCACAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASSSTGC*SRCTGR Trigger: CCTCCCTGTGCACCGGCTGCAGCATCCTGTGCTGCT...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCATTCCCAGGGAGCAGCTaGCTCTCCGCAGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASFPGSS*LSAVLL Trigger: GAGCAGCACTGCGGAGAGCCAGCTGCTCCCTGGGAA...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | TTATCCTTAGCTATGGCAGGTCATCTTGGAAGGGGACAATCCAGAAGGCAGGAATACAGTGGATGCCACTaGCGCAGGGGAAGAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAMAGHLGRGQSRRQEYSGCH*RRGRRS Trigger: CGACCTTCTTCCCCTGCGCCAGTGGCATCCACTGTA...TTCCTGCCTTCTGGATTGTCCCCTTCCAAGATGACCTGCCATAGCTAAGGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGGGCTGCTCTGGGTTGTaGCTGCTGGCTTCCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLGCSGL*LLASTL Trigger: GAGTGTGGAAGCCAGCAGCCACAACCCAGAGCAGCC...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | ATTTATCTGTTGCCCACTTCTCTCAGGAGAAACTGCCAGATGTCTGGCCAGGCCTCTGACCATCGCAGATaGAGCTCTTGTCGATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYLLPTSLRRNCQMSGQASDHRR*SSCRCT Trigger: TGTGCATCGACAAGAGCTTCATCTGCGATGGTCAGA...GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGAAGTGGGCAACAGATAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | TCCCATGAGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCCATATGCTGGCTCTCCGCAGTaGTGCTCAGCAGCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHEHSLIEFNKLERIYPYAGSPQ*CSAAGT Trigger: TGTGCCTGCTGCTGAGCAGCACTGCGGAGAGCCAGC...ATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCACTGGGTTGTGGCTGCTaGCTTCCACACTCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASLGCGC*LPHSGG Trigger: GCCTCCTGAGTGTGGAAGCCAGCAGCCACAACCCAG...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCATGGGCACAGAGTCTCTaGGCTCAGCAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASWAQSL*AQQSPL Trigger: CAGAGGGCTCTGCTGAGCCCAGAGACTCTGTGCCCA...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGGAGAGTTGAAAGCTGTTGCTCATGCCAGAGATTTTCTTTGGCCTCTGCTGCCCGTTGCTGCACATaGAGTTACCTGGGATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWRVESCCSCQRFSLASAARCCT*SYLGCC Trigger: GCAACATCCCAGGTAACTTCATGTGCAGCAACGGGC...AGCAGAGGCCAAAGAAAATCTCTGGCATGAGCAACAGCTTTCAACTCTCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACTCTGACCATCGCAGATaGAGCTCTTGTCGATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHSDHRR*SSCRCT Trigger: TGTGCATCGACAAGAGCTTCATCTGCGATGGTCAGA...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR TCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGGGTCGGGCCACATTTTaGTTTTGCTTTGGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVGRATF*FCFGWD Trigger: ATCCCAGCCAAAGCAAAATCAAAATGTGGCCCGACC...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTTCTGGAGAGCCAGGCTaGTCTGGGTTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDIMGWDGKGSISFCIFLSGEPG*SGLWLL Trigger: CAGCAGCCACAACCCAGAGCAGCCTGGCTCTCCAGA...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTAGTGGTAGCGAGCCGTaGAGCAAAGCAGGGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDIMGWDGKGSISFCIFLSGSEP*SKAGGS Trigger: CGAACCCCCTGCTTTGCTCCACGGCTCGCTACCACT...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | TCCCATGAGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCCATATAGTGGTAGCGAGCCGTaGAGCAAAGCAGGGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SHEHSLIEFNKLERIYPYSGSEP*SKAGGS Trigger: CGAACCCCCTGCTTTGCTCCACGGCTCGCTACCACT...ATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CCA 90 bp | TCCCATGAGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCCATATGGCTGCTCTGGGTTGTaGCTGCTGGCTTCCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: SHEHSLIEFNKLERIYPYGCSGL*LLASTL Trigger: GAGTGTGGAAGCCAGCAGCCACAACCCAGAGCAGCC...ATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACTGGGCACAGAGTCTCTaGGCTCAGCAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVSISWQLSRDSGLMSSDWAQSL*AQQSPL Trigger: CAGAGGGCTCTGCTGAGCCCAGAGACTCTGTGCCCA...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| 3UTR CAA 72 bp | GGCAGCTGCCTGAGGTGGCACCATCTGGTTCCAGTTTaGTCCCTAGTTAGTATGGTTTACCCATTATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSCLRWHHLVPV*SLVSMVYPLLP Trigger: AGGCAATAATGGGTAAACCATACTAACTAGGGACAAAACTGGAACCAGATGGTGCCACCTCAGGCAGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGGAGAGTTGAAAGCTGTTGCTCATGCCAGAGATTTTCTTTGGCCTCTGCTAGACTCGGTGTCAGATaGATAGGGTGGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWRVESCCSCQRFSLASARLGVR*IGWWRK Trigger: CTTCCTCCACCACCCTATTCATCTGACACCGAGTCT...AGCAGAGGCCAAAGAAAATCTCTGGCATGAGCAACAGCTTTCAACTCTCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACATTATGGGATGGGATGGGAAAGGCAGCATTTCTTTTTGCATCTTTCTTAGTTCTCCTCGTCGCTaGCGTCGGGACAGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDIMGWDGKGSISFCIFLSSPRR*RRDSPQ Trigger: TTGAGGACTGTCCCGACGGCAGCGACGAGGAGAACT...AAGAAAGATGCAAAAAGAAATGCTGCCTTTCCCATCCCATCCCATAATGTCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTTGCACAGGCCGTTCCTaGAGTGGTAGCGAGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRILQTKSPNVSISWQLSCTGRS*SGSEPW Trigger: CCACGGCTCGCTACCACTGCAGGAACGGCCTGTGCA...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTAGCAGCACAGGATGCTaGAGCCGGTGCACAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRILQTKSPNVSISWQLSSSTGC*SRCTGR Trigger: CCTCCCTGTGCACCGGCTGCAGCATCCTGTGCTGCT...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTGAGAGCAGCACAGGATaGTGCAGCCGGTGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRILQTKSPNVSISWQLSESSTG*CSRCTG Trigger: CCCTGTGCACCGGCTGCAGCATCCTGTGCTGCTCTC...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR GCA 90 bp | AACAAAATCCAATGGGAAATCTTGACTCCAAGATTTATCTGTTGCCCACTTCTCCAGGAGGCTGCTGGCTaGCTGGGAGCTGGCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKIQWEILTPRFICCPLLQEAAG*LGAGTV Trigger: TACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCTG...GAGAAGTGGGCAACAGATAAATCTTGGAGTCAAGATTTCCCATTGGATTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACCTCCTGAATGTGGCACATGAAGTTACCTaGGATGTTGCACTCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWQLSRDSGLMSSDLLNVAHEVT*DVALVG Trigger: ACCAACGAGTGCAACATCCCAGGTAACTTCATGTGC...CACATTCAGGAGGTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
||
| CDS-3UTR TCA 90 bp | ACGTGTCCTTATGTCCAAATGCACATGGACAATAGGCTCCCAAGTGTTCATAGAAGACTCGGTGTCAGATaGATAGGGTGGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCPYVQMHMDNRLPSVHRRLGVR*IGWWRK Trigger: CTTCCTCCACCACCCTATTCATCTGACACCGAGTCT...TCTATGAACACTTGGGAGCCTATTGTCCATGTGCATTTGGACATAAGGACACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCATACCATGCAGGTCTTTaGTCCAGCAGGGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASYHAGL*SSRASE Trigger: TTCAGAGGCCCTGCTGGACCAAAGACCTGCATGGTA...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CAA 72 bp | AGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATaGGGTTACACACACACACACACACACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: RKALSATQVLSS*GYTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCAATTTTGATTTTGCTTTaGCTGGGATGTTGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAILILL*LGCCTR Trigger: ACGAGTGCAACATCCCAGCCAAAGCAAAATCAAAAT...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
||
| 3UTR CAA 72 bp | GTGTCCCATGAGCACAGTCTGATAGAATTCAACAAGTaGGAGAGGATCTACCCATATGGACTTTGGAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSHEHSLIEFNK*ERIYPYGLWNR Trigger: GCGATTCCAAAGTCCATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| 3UTR CAA 72 bp | AGAGTTGAAAGCTGTTGCTCATGCCAGAGATTTTCTTaGGCCTCTGCTGGAGTAAGATCGATGCATAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVESCCSCQRFS*ASAGVRSMHRR Trigger: TCTCCTATGCATCGATCTTACTCCAGCAGAGGCCAAAGAAAATCTCTGGCATGAGCAACAGCTTTCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | AACAAAATCCAATGGGAAATCTTGACTCCAAGATTTATCTGTTGCCCACTTCTCTGTTGCACTCGTTGGTaGAGTTGTTCCCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKIQWEILTPRFICCPLLCCTRW*SCSQGA Trigger: TGCTCCCTGGGAACAACTTCACCAACGAGTGCAACA...GAGAAGTGGGCAACAGATAAATCTTGGAGTCAAGATTTCCCATTGGATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGACATGGCCCTAGAACCCTGCCAAAGACTATTTACATACATGGCTTCATGGGTAGCCACATACTaGACACCATTATTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: MCDMALEPCQRLFTYMASWVATY*TPLLTL Trigger: CAATGTCAATAATGGTGTTCAGTATGTGGCTACCCA...TGAAGCCATGTATGTAAATAGTCTTTGGCAGGGTTCTAGGGCCATGTCACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR TCA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACTGGGTAGCCACATACTaGACACCATTATTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: NVSISWQLSRDSGLMSSDWVATY*TPLLTL Trigger: CAATGTCAATAATGGTGTTCAGTATGTGGCTACCCA...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS-3UTR CCA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACATTTTGATTTTGCTTTaGGGCATTCCTTCTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVSISWQLSRDSGLMSSDILILL*GIPSRH Trigger: GTGACGAGAAGGAATGCCCCAAAGCAAAATCAAAAT...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS CCA 90 bp | CTGGGCTCAGCAGAGCCCTCTGGAGAGCCAGGCTGCTCTGGGTTGTaGCTGCTGGCTTCCACACTCAGGAGGCTGCTGGCTGCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSAEPSGEPGCSGL*LLASTLRRLLAAWE Trigger: CTCCCAGGCAGCCAGCAGCCTCCTGAGTGTGGAAGCCAGCAGCCACAACCCAGAGCAGCCTGGCTCTCCAGAGGGCTCTGCTGAGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 90 bp | GGCTGCTGGCTTCCACACTCAGGAGGCTGCTGGCTGCCTGGGAGCTaGCACTGTAGGCACTTCCTGACCGGGAGCGGTAAGGAGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCWLPHSGGCWLPGS*HCRHFLTGSGKEAG Trigger: ACCTGCCTCCTTACCGCTCCCGGTCAGGAAGTGCCTACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGTGTGGAAGCCAGCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS TCA 90 bp | TGCCGTCGGGACAGTCCTCAAATCCATTGCAGCGGAAGCGGCCGATaGTACAGTGGATGCCACTGGCGCAGGGGAAGAAGGTCGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRRDSPQIHCSGSGR*YSGCHWRRGRRSGH Trigger: GTGGCCCGACCTTCTTCCCCTGCGCCAGTGGCATCCACTGTATCATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTGTCCCGACGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 90 bp | AGCTCTTGTCGATGCACAGGCCGTTCCTGCAGTGGTAGCGAGCCGTaGAGCAAAGCAGGGGGTTCGCTGTGCAGTTCTCCTCGTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCRCTGRSCSGSEP*SKAGGSLCSSPRRC Trigger: GCAGCGACGAGGAGAACTGCACAGCGAACCCCCTGCTTTGCTCCACGGCTCGCTACCACTGCAGGAACGGCCTGTGCATCGACAAGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS GCA 90 bp | TCCTTCTCGTCACTCTTGTCGAAGCAGTCAGGCAGCCCGTCACACTaGCAGGCGCCCGGGATGCACCGCCCGTTGCTGCACATGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFSSLLSKQSGSPSH*QAPGMHRPLLHMKL Trigger: TAACTTCATGTGCAGCAACGGGCGGTGCATCCCGGGCGCCTGGCAGTGTGACGGGCTGCCTGACTGCTTCGACAAGAGTGACGAGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS CCA 90 bp | CCAGGCGCCCGGGATGCACCGCCCGTTGCTGCACATGAAGTTACCTaGGATGTTGCACTCGTTGGTGAAGTTGTTCCCAGGGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGARDAPPVAAHEVT*DVALVGEVVPREQL Trigger: CAGCTGCTCCCTGGGAACAACTTCACCAACGAGTGCAACATCCCAGGTAACTTCATGTGCAGCAACGGGCGGTGCATCCCGGGCGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS TCA 90 bp | GAGAGAGCAGCACAGGATGCTGCAGCCGGTGCACAGGGAGGGTCATaGGGTTGTTTCGCTTTCGCTGATGATGCAGGACCAGTGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERAAQDAAAGAQGGS*GCFAFADDAGPVRA Trigger: TGCTCGCACTGGTCCTGCATCATCAGCGAAAGCGAAACAACCTCATGACCCTCCCTGTGCACCGGCTGCAGCATCCTGTGCTGCTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS GCA 90 bp | GAGGGTCATGAGGTTGTTTCGCTTTCGCTGATGATGCAGGACCAGTaGGAGCAGGGCCACCACCAGCACGAAGATGACAGAGCTGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: EGHEVVSLSLMMQDQ*EQGHHQHEDDRAAD Trigger: ATCGGCAGCTCTGTCATCTTCGTGCTGGTGGTGGCCCTGCTCGCACTGGTCCTGCATCATCAGCGAAAGCGAAACAACCTCATGACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 90 bp | GGACAGTCCTCAAATCCATTGCAGCGGAAGCGGCCGATGATACAGTaGATGCCACTGGCGCAGGGGAAGAAGGTCGGGCCACATTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQSSNPLQRKRPMIQ*MPLAQGKKVGPHFD Trigger: ATCAAAATGTGGCCCGACCTTCTTCCCCTGCGCCAGTGGCATCCACTGTATCATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATCAGTCCTCAAATCCATaGCAGCGGAAGCGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VVVACTRTGWASRRRKGNQSSNP*QRKRPM Trigger: CATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTG...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS TCA 90 bp | TGGAGGAAGGTCGTACCATGCAGGTCTTTGGTCCAGCAGGGCCTCTaGATAGGAGGGTGGAGAGCCTACTTCCGAGGCATTTTGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WRKVVPCRSLVQQGL*IGGWRAYFRGILFS Trigger: GCTGAACAAAATGCCTCGGAAGTAGGCTCTCCACCCTCCTATTCAGAGGCCCTGCTGGACCAAAGACCTGCATGGTACGACCTTCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS TCA 90 bp | GCGGTAAGGAGGCAGGTCAGCTTGGTTCAGAGACTCGGTGTCAGATaGATAGGGTGGTGGAGGAAGGTCGTACCATGCAGGTCTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVRRQVSLVQRLGVR*IGWWRKVVPCRSLV Trigger: GACCAAAGACCTGCATGGTACGACCTTCCTCCACCACCCTATTCATCTGACACCGAGTCTCTGAACCAAGCTGACCTGCCTCCTTACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS GCA 90 bp | GGTAGTACACAAGCTGGTTCTCCGAGGTCACAAACACCTGCCCGCTaGCTGGTTCTAGAGAACTCTCGCAGCTCTCCTCGTCACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSTQAGSPRSQTPAR*LVLENSRSSPRHCC Trigger: ACAACAGTGACGAGGAGAGCTGCGAGAGTTCTCTAGAACCAGGCAGCGGGCAGGTGTTTGTGACCTCGGAGAACCAGCTTGTGTACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATGGGATGTTGCACTCGTaGGTGAAGTTGTTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVVACTRTGWASRRRKGNGMLHS*VKLFPG Trigger: CCCTGGGAACAACTTCACCAACGAGTGCAACATCCC...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | AAAAGGATGATGGGGCCAAGGCAGGAGCAGACTCTGGTAACCTACACATTAGCACCAGGCTGCTCTGGGTaGTGGCTGCTGGCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KRMMGPRQEQTLVTYTLAPGCSG*WLLAST Trigger: TGTGGAAGCCAGCAGCCACAACCCAGAGCAGCCTGG...TGCTAATGTGTAGGTTACCAGAGTCTGCTCCTGCCTTGGCCCCATCATCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACCACTCGTTGGTGAAGTaGTTCCCAGGGAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHHSLVK*FPGSSW Trigger: CCAGCTGCTCCCTGGGAACAACTTCACCAACGAGTG...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCCAGAAAAGCTCTGTCTGCCACCCAGGTTCTTTCTTCATTGGGTTACACGGGATGCACCGCCCGTaGCTGCACATGAAGTTACCT | + |
|
Preference number: 5 (lower is better) Translates to: CSQKSSVCHPGSFFIGLHGMHRP*LHMKLP Trigger: AGGTAACTTCATGTGCAGCAACGGGCGGTGCATCCC...GTGTAACCCAATGAAGAAAGAACCTGGGTGGCAGACAGAGCTTTTCTGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS-3UTR CAA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGTCCTTCTCGTCACTCTaGTCGAAGCAGTCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRSFSSL*SKQSGS Trigger: GCTGCCTGACTGCTTCGACAAGAGTGACGAGAAGGA...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS-3UTR CAA 90 bp | ATTTATCTGTTGCCCACTTCTCTCAGGAGAAACTGCCAGATGTCTGGCCAGGCCTCGCAGATGAAGCTCTaGTCGATGCACAGGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYLLPTSLRRNCQMSGQASQMKL*SMHRPF Trigger: GAACGGCCTGTGCATCGACAAGAGCTTCATCTGCGA...GGCCTGGCCAGACATCTGGCAGTTTCTCCTGAGAGAAGTGGGCAACAGATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTTTGGAGAGTTGAAAGCTGTTGCTCATGCCAGAGATTTTCTTTGGCCTCTGCTCCAGGCTGCTCTGGGTaGTGGCTGCTGGCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VWRVESCCSCQRFSLASAPGCSG*WLLAST Trigger: TGTGGAAGCCAGCAGCCACAACCCAGAGCAGCCTGG...AGCAGAGGCCAAAGAAAATCTCTGGCATGAGCAACAGCTTTCAACTCTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGAGGAGGAAAGGTAATCCAAACAAACAGTGGATGGTGGACTTGTCTCTGCACTCGTTGGTGAAGTaGTTCCCAGGGAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRKGNPNKQWMVDLSLHSLVK*FPGSSW Trigger: CCAGCTGCTCCCTGGGAACAACTTCACCAACGAGTG...CAGAGACAAGTCCACCATCCACTGTTTGTTTGGATTACCTTTCCTCCTCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTGGTGGTGGCATGCACTAGGACTGGCTGGGCATCAAGGAGGAGGAAAGGTAATGGCCACATTTTGATTTaGCTTTGGGGCATTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVVACTRTGWASRRRKGNGHILI*LWGIPS Trigger: AGAAGGAATGCCCCAAAGCAAAATCAAAATGTGGCC...ATTACCTTTCCTCCTCCTTGATGCCCAGCCAGTCCTAGTGCATGCCACCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS-3UTR CAA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGAGGTCGGGCCACATTTaGATTTTGCTTTGGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRRSGHI*ILLWGI Trigger: AATGCCCCAAAGCAAAATCAAAATGTGGCCCGACCT...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS-3UTR CAA 90 bp | ACGTGTCCTTATGTCCAAATGCACATGGACAATAGGCTCCCAAGTGTTCATAGACAGTCCTCAAATCCATaGCAGCGGAAGCGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TCPYVQMHMDNRLPSVHRQSSNP*QRKRPM Trigger: CATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTG...TCTATGAACACTTGGGAGCCTATTGTCCATGTGCATTTGGACATAAGGACACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGTGCCAGGTCATTCCAAAGAACATCCCTGAAATCTGGAGGAGAAGGTATGCTTTGGCTGGGATGTaGCACTCGTTGGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EECQVIPKNIPEIWRRRYALAGM*HSLVKL Trigger: CAACTTCACCAACGAGTGCAACATCCCAGCCAAAGC...ATACCTTCTCCTCCAGATTTCAGGGATGTTCTTTGGAATGACCTGGCACTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | CCTCCAGACAACTTTCAGAGCACCAAAAAGAAGCGGGGACCCATCAAAGGAAGGCTCGTCACTGTTGTCTaGACAGTTATTCTGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: PPDNFQSTKKKRGPIKGRLVTVV*TVILTI Trigger: GATGGTCAGAATAACTGTCAAGACAACAGTGACGAG...CCTTCCTTTGATGGGTCCCCGCTTCTTTTTGGTGCTCTGAAAGTTGTCTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | AATGTATCTATAAGTTGGCAGCTCAGTAGAGACTCTGGTCTGATGTCTTCTGACGGGATGTTGCACTCGTaGGTGAAGTTGTTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NVSISWQLSRDSGLMSSDGMLHS*VKLFPG Trigger: CCCTGGGAACAACTTCACCAACGAGTGCAACATCCC...GTCAGAAGACATCAGACCAGAGTCTCTACTGAGCTGCCAACTTATAGATACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | TCCCATGAGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCCATATTCGCAGATGAAGCTCTaGTCGATGCACAGGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHEHSLIEFNKLERIYPYSQMKL*SMHRPF Trigger: GAACGGCCTGTGCATCGACAAGAGCTTCATCTGCGA...ATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | TCCCATGAGCACAGTCTGATAGAATTCAACAAGTTGGAGAGGATCTACCCATATCTCGTCACTGTTGTCTaGACAGTTATTCTGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SHEHSLIEFNKLERIYPYLVTVV*TVILTI Trigger: GATGGTCAGAATAACTGTCAAGACAACAGTGACGAG...ATATGGGTAGATCCTCTCCAACTTGTTGAATTCTATCAGACTGTGCTCATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTAGGTCGGGCCACATTTaGATTTTGCTTTGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRILQTKSPNVSISWQLSRSGHI*ILLWLG Trigger: TCCCAGCCAAAGCAAAATCAAAATGTGGCCCGACCT...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
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| CDS-3UTR CAA 90 bp | GTAAGAATCCTCCAAACTAAGTCTCCAAATGTATCTATAAGTTGGCAGCTCAGTAAGTTACCTGGGATGTaGCACTCGTTGGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRILQTKSPNVSISWQLSKLPGM*HSLVKL Trigger: CAACTTCACCAACGAGTGCAACATCCCAGGTAACTT...ACTGAGCTGCCAACTTATAGATACATTTGGAGACTTAGTTTGGAGGATTCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS GCA 72 bp | TCACTCTTGTCGAAGCAGTCAGGCAGCCCGTCACACTaGCAGGCGCCCGGGATGCACCGCCCGTTGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSKQSGSPSH*QAPGMHRPLLH Trigger: GTGCAGCAACGGGCGGTGCATCCCGGGCGCCTGGCAGTGTGACGGGCTGCCTGACTGCTTCGACAAGAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS GCA 72 bp | TGGTCCAGGACCACCAGGCGAGAGAGCAGCACAGGATaGTGCAGCCGGTGCACAGGGAGGGTCATGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSRTTRRESSTG*CSRCTGRVMRL Trigger: CAACCTCATGACCCTCCCTGTGCACCGGCTGCAGCATCCTGTGCTGCTCTCTCGCCTGGTGGTCCTGGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 72 bp | CTTCCACACTCAGGAGGCTGCTGGCTGCCTGGGAGCTaGCACTGTAGGCACTTCCTGACCGGGAGCGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPHSGGCWLPGS*HCRHFLTGSGK Trigger: CTTACCGCTCCCGGTCAGGAAGTGCCTACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGTGTGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CAA 90 bp | TCAGGCAGCCCGTCACACTGCCAGGCGCCCGGGATGCACCGCCCGTaGCTGCACATGAAGTTACCTGGGATGTTGCACTCGTTGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSPSHCQAPGMHRP*LHMKLPGMLHSLVK Trigger: CTTCACCAACGAGTGCAACATCCCAGGTAACTTCATGTGCAGCAACGGGCGGTGCATCCCGGGCGCCTGGCAGTGTGACGGGCTGCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS CCA 72 bp | CGATGCACAGGCCGTTCCTGCAGTGGTAGCGAGCCGTaGAGCAAAGCAGGGGGTTCGCTGTGCAGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCTGRSCSGSEP*SKAGGSLCSSP Trigger: AGGAGAACTGCACAGCGAACCCCCTGCTTTGCTCCACGGCTCGCTACCACTGCAGGAACGGCCTGTGCATCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS GCA 72 bp | TCCAGGACCACCAGGCGAGAGAGCAGCACAGGATGCTaGAGCCGGTGCACAGGGAGGGTCATGAGGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRTTRRESSTGC*SRCTGRVMRLF Trigger: AAACAACCTCATGACCCTCCCTGTGCACCGGCTGCAGCATCCTGTGCTGCTCTCTCGCCTGGTGGTCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 72 bp | ATACTTCTTCGGTGCCCTGACTGGGCACAGAGTCTCTaGGCTCAGCAGAGCCCTCTGGAGAGCCAGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ILLRCPDWAQSL*AQQSPLESQAA Trigger: AGCAGCCTGGCTCTCCAGAGGGCTCTGCTGAGCCCAGAGACTCTGTGCCCAGTCAGGGCACCGAAGAAGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CAA 90 bp | CCCGGGATGCACCGCCCGTTGCTGCACATGAAGTTACCTGGGATGTaGCACTCGTTGGTGAAGTTGTTCCCAGGGAGCAGCTGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGMHRPLLHMKLPGM*HSLVKLFPGSSWLS Trigger: GGAGAGCCAGCTGCTCCCTGGGAACAACTTCACCAACGAGTGCAACATCCCAGGTAACTTCATGTGCAGCAACGGGCGGTGCATCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
||
| CDS GCA 72 bp | AAAGCAGGGGGTTCGCTGTGCAGTTCTCCTCGTCGCTaGCGTCGGGACAGTCCTCAAATCCATTGCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: KAGGSLCSSPRR*RRDSPQIHCSG Trigger: TCCGCTGCAATGGATTTGAGGACTGTCCCGACGGCAGCGACGAGGAGAACTGCACAGCGAACCCCCTGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS CCA 72 bp | TCAAATCCATTGCAGCGGAAGCGGCCGATGATACAGTaGATGCCACTGGCGCAGGGGAAGAAGGTCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SNPLQRKRPMIQ*MPLAQGKKVGP Trigger: TGGCCCGACCTTCTTCCCCTGCGCCAGTGGCATCCACTGTATCATCGGCCGCTTCCGCTGCAATGGATTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS CAA 72 bp | TCCTCGTCGCTGCCGTCGGGACAGTCCTCAAATCCATaGCAGCGGAAGCGGCCGATGATACAGTGGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPSGQSSNP*QRKRPMIQWMP Trigger: TGGCATCCACTGTATCATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTGTCCCGACGGCAGCGACGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS TCA 72 bp | GACAGTCCTCAAATCCATTGCAGCGGAAGCGGCCGATaGTACAGTGGATGCCACTGGCGCAGGGGAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSPQIHCSGSGR*YSGCHWRRGRR Trigger: CCTTCTTCCCCTGCGCCAGTGGCATCCACTGTATCATCGGCCGCTTCCGCTGCAATGGATTTGAGGACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS TCA 72 bp | GCACAGGATGCTGCAGCCGGTGCACAGGGAGGGTCATaGGGTTGTTTCGCTTTCGCTGATGATGCAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: AQDAAAGAQGGS*GCFAFADDAGP Trigger: TGGTCCTGCATCATCAGCGAAAGCGAAACAACCTCATGACCCTCCCTGTGCACCGGCTGCAGCATCCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
||
| CDS GCA 72 bp | CAAGCTGGTTCTCCGAGGTCACAAACACCTGCCCGCTaGCTGGTTCTAGAGAACTCTCGCAGCTCTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QAGSPRSQTPAR*LVLENSRSSPR Trigger: ACGAGGAGAGCTGCGAGAGTTCTCTAGAACCAGGCAGCGGGCAGGTGTTTGTGACCTCGGAGAACCAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS GCA 72 bp | GAGGTTGTTTCGCTTTCGCTGATGATGCAGGACCAGTaGGAGCAGGGCCACCACCAGCACGAAGATGACAGA | + |
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Preference number: 6 (lower is better) Translates to: EVVSLSLMMQDQ*EQGHHQHEDDR Trigger: TCTGTCATCTTCGTGCTGGTGGTGGCCCTGCTCGCACTGGTCCTGCATCATCAGCGAAAGCGAAACAACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CCA 72 bp | CGGGATGCACCGCCCGTTGCTGCACATGAAGTTACCTaGGATGTTGCACTCGTTGGTGAAGTTGTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RDAPPVAAHEVT*DVALVGEVVPR Trigger: CCTGGGAACAACTTCACCAACGAGTGCAACATCCCAGGTAACTTCATGTGCAGCAACGGGCGGTGCATCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS CAA 72 bp | CACCGCCCGTTGCTGCACATGAAGTTACCTGGGATGTaGCACTCGTTGGTGAAGTTGTTCCCAGGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HRPLLHMKLPGM*HSLVKLFPGSS Trigger: GCTGCTCCCTGGGAACAACTTCACCAACGAGTGCAACATCCCAGGTAACTTCATGTGCAGCAACGGGCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058790.12 |
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| CDS TCA 72 bp | AGGCAGGTCAGCTTGGTTCAGAGACTCGGTGTCAGATaGATAGGGTGGTGGAGGAAGGTCGTACCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RQVSLVQRLGVR*IGWWRKVVPCR Trigger: CCTGCATGGTACGACCTTCCTCCACCACCCTATTCATCTGACACCGAGTCTCTGAACCAAGCTGACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058790.12 ENSMUST00000111222.2 |
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| CDS CAA 72 bp | TGCCACTGGCGCAGGGGAAGAAGGTCGGGCCACATTTaGATTTTGCTTTGGCTGGGATGTTGCACTCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CHWRRGRRSGHI*ILLWLGCCTRW Trigger: CCAACGAGTGCAACATCCCAGCCAAAGCAAAATCAAAATGTGGCCCGACCTTCTTCCCCTGCGCCAGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
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| CDS TCA 72 bp | TTGATTTTGCTTTGGCTGGGATGTTGCACTCGTTGGTaGAGTTGTTCCCAGGGAGCAGCTGGCTCTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LILLWLGCCTRW*SCSQGAAGSPQ Trigger: CTGCGGAGAGCCAGCTGCTCCCTGGGAACAACTTCACCAACGAGTGCAACATCCCAGCCAAAGCAAAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111222.2 |
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