Pregenerated sensors for LDLR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032193Ensembl transcript IDs: ENSMUST00000034713.9, ENSMUST00000213114.2
Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTaGAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGACAGGGG | + |
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Preference number: 1 (lower is better) Translates to: HVGAQHRTGKVRREK*KPHSETRGLGTGQG Trigger: CCCCTGTCCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR TCA 90 bp | GCAGCTGAGCTTGGCCCCCAGCCCAGCTTTGCTCTTATCTTGCTTTaGGCAACACAGAGCCCAGGGAGGTGGCAGGACCAGTGCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: AAELGPQPSFALILL*ATQSPGRWQDQCWM Trigger: CATCCAGCACTGGTCCTGCCACCTCCCTGGGCTCTGTGTTGCTCAAAGCAAGATAAGAGCAAAGCTGGGCTGGGGGCCAAGCTCAGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR GCA 90 bp | AGGTTAGGGACTGGCTATGGTACCCAGGACCCGGTCAGTAGTACCTaGTGTCTCATGTCCAGCAGGCTTCTCTCTGCCTGGGTGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RLGTGYGTQDPVSST*CLMSSRLLSAWVGL Trigger: GAGACCCACCCAGGCAGAGAGAAGCCTGCTGGACATGAGACAGCAGGTACTACTGACCGGGTCCTGGGTACCATAGCCAGTCCCTAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CCA 90 bp | TCAAGATCCAGCAAGATCAGTACCGAATGTCACGAGTCACTTTCCTaGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SRSSKISTECHESLS*LLMGAAESGRKALG Trigger: TCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAGGAAAGTGACTCGTGACATTCGGTACTGATCTTGCTGGATCTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR TCA 90 bp | TCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTaGGTAGTGGACAGGTGGATCTACCCAGGAATCCAAGTAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SLQVSQWAGQCALVS*VVDRWIYPGIQVRP Trigger: TGGCCTTACTTGGATTCCTGGGTAGATCCACCTGTCCACTACTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR GCA 90 bp | CACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTaGCCTTGTGTCTTGAGTAGTGGACAGGTGGATCTACCCAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: HITELFTSVPVGWAV*PCVLSSGQVDLPRN Trigger: ATTCCTGGGTAGATCCACCTGTCCACTACTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CCA 90 bp | GTCAGTAGTACCTGCTGTCTCATGTCCAGCAGGCTTCTCTCTGCCTaGGTGGGTCTCTTCCTCCTCCGTGTTAGTGTTGAAAAGAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: VSSTCCLMSSRLLSA*VGLFLLRVSVEKSR Trigger: TCTACTCTTTTCAACACTAACACGGAGGAGGAAGAGACCCACCCAGGCAGAGAGAAGCCTGCTGGACATGAGACAGCAGGTACTACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CCA 90 bp | GTAGTACCTGCTGTCTCATGTCCAGCAGGCTTCTCTCTGCCTGGGTaGGTCTCTTCCTCCTCCGTGTTAGTGTTGAAAAGAGTAGAATTC | + |
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Preference number: 1 (lower is better) Translates to: VVPAVSCPAGFSLPG*VSSSSVLVLKRVEF Trigger: GAATTCTACTCTTTTCAACACTAACACGGAGGAGGAAGAGACCCACCCAGGCAGAGAGAAGCCTGCTGGACATGAGACAGCAGGTACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR TCA 90 bp | TTCAAAGCAGTTCCCACCCACTCAAAGCAACGCACAGGACAGGCCTaGGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: FKAVPTHSKQRTGQA*DQPIQIIFVYRASQ Trigger: CTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGCGTTGCTTTGAGTGGGTGGGAACTGCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR GCA 90 bp | GTCTCTGTGAGAGAGGATGACGTTACCAGAGGAGCTAAACAACTCTaGTGTGCAGAGCCAGAAACCACCAAACAAACAAACAAACAAACA | + |
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Preference number: 1 (lower is better) Translates to: VSVREDDVTRGAKQL*CAEPETTKQTNKQT Trigger: TGTTTGTTTGTTTGTTTGTTTGGTGGTTTCTGGCTCTGCACAGCAGAGTTGTTTAGCTCCTCTGGTAACGTCATCCTCTCTCACAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CCA 90 bp | TCCTCCTCCGTGTTAGTGTTGAAAAGAGTAGAATTCAGAAGCTTCTaGGACAGCCTATTTGGCTTCCAAGGAAATGAAGATGGGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSVLVLKRVEFRSF*DSLFGFQGNEDGRK Trigger: TTTTCTCCCATCTTCATTTCCTTGGAAGCCAAATAGGCTGTCCCAGAAGCTTCTGAATTCTACTCTTTTCAACACTAACACGGAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR TCA 90 bp | AATTTAATCCATCACAGTATGATATTTTCAGCCTATAAAAACATCTaGACAAGGGTTTCAAAGCAGTTCCCACCCACTCAAAGCAACGCA | + |
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Preference number: 1 (lower is better) Translates to: NLIHHSMIFSAYKNI*TRVSKQFPPTQSNA Trigger: TGCGTTGCTTTGAGTGGGTGGGAACTGCTTTGAAACCCTTGTTCAGATGTTTTTATAGGCTGAAAATATCATACTGTGATGGATTAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGGGGCAGACAGGCAGCTaGGCTTGGCCCCCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SAQREVQASLGDSGAGHRGQTGS*AWPPAQ Trigger: CTGGGCTGGGGGCCAAGCTCAGCTGCCTGTCTGCCC...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGTGGCAGGACCAGTGCTaGATGGGGAGGTCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SAQREVQASLGDSGAGHRWQDQC*MGRSGE Trigger: CTCTCCAGACCTCCCCATCCAGCACTGGTCCTGCCA...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGAGGACCAGTGCTGGATaGGGAGGTCTGGAGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SAQREVQASLGDSGAGHRRTSAG*GGLERV Trigger: CACTCTCTCCAGACCTCCCCATCCAGCACTGGTCCT...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGCCTGAGGTTAGGGACTaGCTATGGTACCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SAQREVQASLGDSGAGHRPEVRD*LWYPGP Trigger: GGGTCCTGGGTACCATAGCCAGTCCCTAACCTCAGG...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGACAGGACAGGGGTCCTaGCGGCCACCCCTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RALYKCPSGLGSVPLCLETGQGS*RPPLSS Trigger: GCTGCTCAGGGGTGGCCGGCAGGACCCCTGTCCTGT...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGGCGGGTATCCATCACTaGCAGCTGCCGGCCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: APGSVQPRSTNVDHVGAQAGIHH*QLPASR Trigger: TCTTGAGGCCGGCAGCTGCCAGTGATGGATACCCGC...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGAGGTGGCAGGACCAGTaGTGGATGGGGAGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ARCHRHITELFTSVPVGWRWQDQ*WMGRSG Trigger: TCCAGACCTCCCCATCCAGCACTGGTCCTGCCACCT...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGAGGCTTCTCTCTGCCTaGGTGGGTCTCTTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: APGSVQPRSTNVDHVGAQRLLSA*VGLFLL Trigger: GAGGAGGAAGAGACCCACCCAGGCAGAGAGAAGCCT...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTAGGCTTCTCTCTGCCTaGGTGGGTCTCTTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HVGAQHRTGKVRREKCKPRLLSA*VGLFLL Trigger: GAGGAGGAAGAGACCCACCCAGGCAGAGAGAAGCCT...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGAGGTGGCAGGACCAGTaGTGGATGGGGAGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RALYKCPSGLGSVPLCLERWQDQ*WMGRSG Trigger: TCCAGACCTCCCCATCCAGCACTGGTCCTGCCACCT...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGCCGGTCAGTAGTACCTaGTGTCTCATGTCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: APGSVQPRSTNVDHVGAQPVSST*CLMSSR Trigger: CCTGCTGGACATGAGACAGCAGGTACTACTGACCGG...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGACAGGACAGGGGTCCTaGCGGCCACCCCTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGTGQGS*RPPLSS Trigger: GCTGCTCAGGGGTGGCCGGCAGGACCCCTGTCCTGT...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCCACGAGTCACTTTCCTaGCTTCTGATGGGGGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: QVPSAHYRALYKCPSGLGHESLS*LLMGAA Trigger: TGCCGCCCCCATCAGAAGCCAGGAAAGTGACTCGTG...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAGGGCAGACAGGCAGCTaGGCTTGGCCCCCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRGQTGS*AWPPAQ Trigger: CTGGGCTGGGGGCCAAGCTCAGCTGCCTGTCTGCCC...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGGAAGGCTCTGGGATaGAGGTCAATGCAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: VPSTEREKCAERSASLTRRKALG*RSMQEV Trigger: GACTTCCTGCATTGACCTTCATCCCAGAGCCTTCCT...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR TCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGAGGAAGGCTCTGGGATaGAGGTCAATGCAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: APGSVQPRSTNVDHVGAQRKALG*RSMQEV Trigger: GACTTCCTGCATTGACCTTCATCCCAGAGCCTTCCT...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGTTCTCTCTGCCTGGGTaGGTCTCTTCCTCCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: RALYKCPSGLGSVPLCLEFSLPG*VSSSSV Trigger: CACGGAGGAGGAAGAGACCCACCCAGGCAGAGAGAA...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCGTTTTGGCAAAGGCATaGGCGGGTATCCATCACTGG | + |
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Preference number: 2 (lower is better) Translates to: QVPSAHYRALYKCPSGLGVLAKA*AGIHHW Trigger: CCAGTGATGGATACCCGCTCATGCCTTTGCCAAAAC...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGCCGGTCAGTAGTACCTaGTGTCTCATGTCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RALYKCPSGLGSVPLCLEPVSST*CLMSSR Trigger: CCTGCTGGACATGAGACAGCAGGTACTACTGACCGG...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGTGGACCTCAGACATGTaGCCACCTCTTCCTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: ARCHRHITELFTSVPVGWWTSDM*PPLPLE Trigger: CTCAAGAGGAAGAGGTGGGCACATGTCTGAGGTCCA...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGCAGAGCCCAGGGAGGTaGCAGGACCAGTGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGQSPGR*QDQCWM Trigger: CATCCAGCACTGGTCCTGCCACCTCCCTGGGCTCTG...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCGAATTCAGAAGCTTCTaGGACAGCCTATTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LASDGGGRVRQEGSGMKVEFRSF*DSLFGF Trigger: GAAGCCAAATAGGCTGTCCCAGAAGCTTCTGAATTC...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGCAGGCAGGAAGGCTCTaGGATGAAGGTCAATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RALYKCPSGLGSVPLCLEQAGRL*DEGQCR Trigger: CCTGCATTGACCTTCATCCCAGAGCCTTCCTGCCTG...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CAA 90 bp | CTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTaGAGTAGTGGACAGGTGGATCTACCCAGGAATCCAAGTAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LFTSVPVGWAVCPCV*SSGQVDLPRNPSKA Trigger: GGCCTTACTTGGATTCCTGGGTAGATCCACCTGTCCACTACTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTGGATGGGGAGGTCTaGAGAGAGTGTCTTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HYRALYKCPSGLGSVPLCLDGEV*RECLFC Trigger: GCAGAAAAGACACTCTCTCCAGACCTCCCCATCCAG...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CAA 90 bp | AGCAGGCCAGGACTCCTGAGCAAGGCAACCAGTTGTCTCAGGCACTaGATAAATATTAAGGGAGAATGGCGACTTGGGCTTGTCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SRPGLLSKATSCLRH*INIKGEWRLGLVPP Trigger: TGGAGGGACAAGCCCAAGTCGCCATTCTCCCTTAATATTTATCAAGTGCCTGAGACAACTGGTTGCCTTGCTCAGGAGTCCTGGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTAGAGAGTGTCTTTTCTaGCTAAGCTTGGCAATGGAT | + |
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Preference number: 2 (lower is better) Translates to: HVGAQHRTGKVRREKCKPRECLF*LSLAMD Trigger: ATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCT...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCGAATTCAGAAGCTTCTaGGACAGCCTATTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: QVPSAHYRALYKCPSGLGEFRSF*DSLFGF Trigger: GAAGCCAAATAGGCTGTCCCAGAAGCTTCTGAATTC...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAATATTAAGGGAGAATaGCGACTTGGGCTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QVPSAHYRALYKCPSGLGNIKGE*RLGLVP Trigger: AGGGACAAGCCCAAGTCGCCATTCTCCCTTAATATT...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CAA 90 bp | GGCTTCTCTCTGCCTGGGTGGGTCTCTTCCTCCTCCGTGTTAGTGTaGAAAAGAGTAGAATTCAGAAGCTTCTGGGACAGCCTATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GFSLPGWVSSSSVLV*KRVEFRSFWDSLFG Trigger: GCCAAATAGGCTGTCCCAGAAGCTTCTGAATTCTACTCTTTTCAACACTAACACGGAGGAGGAAGAGACCCACCCAGGCAGAGAGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGAGAGAGTGTCTTTTCTaGCTAAGCTTGGCAATGGAT | + |
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Preference number: 2 (lower is better) Translates to: ARCHRHITELFTSVPVGWRECLF*LSLAMD Trigger: ATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCT...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAGGACCAGTGCTGGATaGGGAGGTCTGGAGAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRRTSAG*GGLERV Trigger: CACTCTCTCCAGACCTCCCCATCCAGCACTGGTCCT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCACGAGTCACTTTCCTaGCTTCTGATGGGGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AQDRPEISPFKSSLYTEHHESLS*LLMGAA Trigger: TGCCGCCCCCATCAGAAGCCAGGAAAGTGACTCGTG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CAA 90 bp | TCACTATGTAGGCTTGGACCTCAGACATGTGCCCACCTCTTCCTCTaGAGCATAGGATTAAAGCCAAGTGCCACCACACCTGAGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: SLCRLGPQTCAHLFL*SIGLKPSATTPEKP Trigger: TGGTTTCTCAGGTGTGGTGGCACTTGGCTTTAATCCTATGCTCAAGAGGAAGAGGTGGGCACATGTCTGAGGTCCAAGCCTACATAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAGTGCGCAGAGAGAAGTaGAAGCCTCACTCGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRVRREK*KPHSET Trigger: AGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCAC...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAGTGGGCTGGGCAGTGTaGCCTTGTGTCTTGAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRVGWAV*PCVLSS Trigger: ACTACTCAAGACACAAGGGCACACTGCCCAGCCCAC...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATGCTCTTATCTTGCTTTaGGCAACACAGAGCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AQDRPEISPFKSSLYTEHALILL*ATQSPG Trigger: CCCTGGGCTCTGTGTTGCTCAAAGCAAGATAAGAGC...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCTGGCAGGACCAGTGCTaGATGGGGAGGTCTGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NKQTNKQTNRLTKHQTEAWQDQC*MGRSGE Trigger: CTCTCCAGACCTCCCCATCCAGCACTGGTCCTGCCA...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCGCGGGTATCCATCACTaGCAGCTGCCGGCCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NKQTNKQTNRLTKHQTEAAGIHH*QLPASR Trigger: TCTTGAGGCCGGCAGCTGCCAGTGATGGATACCCGC...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGATGGATGCTTGGAGCCTaGCAATTATCTTCTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRWMLGA*QLSSVV Trigger: GACCACAGAAGATAATTGCCAGGCTCCAAGCATCCA...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCCAGCAGGCTTCTCTCTaGCTGGGTGGGTCTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NKQTNKQTNRLTKHQTEAQQASL*LGGSLP Trigger: AGGAAGAGACCCACCCAGGCAGAGAGAAGCCTGCTG...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCTGTGGACCACGTGGGTaGCCAGCACAGAACGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NKQTNKQTNRLTKHQTEACGPRG*PAQNGK Trigger: TTTCCCGTTCTGTGCTGGGCACCCACGTGGTCCACA...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAGAAGAAGGCAATGGATaGTTGGAGCCTGGCAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPREEGNG*LEPGNY Trigger: ATAATTGCCAGGCTCCAAGCATCCATTGCCTTCTTC...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATGAAATTGCAGAGAGGTaGAGCAATCAGGGTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AQDRPEISPFKSSLYTEHEIAER*SNQGLQ Trigger: TTGCAAACCCTGATTGCTGCACCTCTCTGCAATTTC...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAATATTAAGGGAGAATaGCGACTTGGGCTTGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DRPEISPFKSSLYTEHPRNIKGE*RLGLVP Trigger: AGGGACAAGCCCAAGTCGCCATTCTCCCTTAATATT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGGACAGGCAGCTGAGCTaGGCCCCCAGCCCAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: APGSVQPRSTNVDHVGAQDRQLS*APSPAL Trigger: CAAAGCTGGGCTGGGGGCCAAGCTCAGCTGCCTGTC...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR GCA 72 bp | GCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTaGAAGCCTCACTCGGAGACTCGGGGGCTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: AQHRTGKVRREK*KPHSETRGLGT Trigger: TGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | GCAACACAGAGCCCAGGGAGGTGGCAGGACCAGTGCTaGATGGGGAGGTCTGGAGAGAGTGTCTTTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ATQSPGRWQDQC*MGRSGESVFSA Trigger: GGCAGAAAAGACACTCTCTCCAGACCTCCCCATCCAGCACTGGTCCTGCCACCTCCCTGGGCTCTGTGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR TCA 72 bp | CTTGGCCCCCAGCCCAGCTTTGCTCTTATCTTGCTTTaGGCAACACAGAGCCCAGGGAGGTGGCAGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGPQPSFALILL*ATQSPGRWQDQ Trigger: CTGGTCCTGCCACCTCCCTGGGCTCTGTGTTGCTCAAAGCAAGATAAGAGCAAAGCTGGGCTGGGGGCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR TCA 72 bp | ATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATaGAGGTCAATGCAGGAAGTCCTGAGGTTAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: MGAAESGRKALG*RSMQEVLRLGT Trigger: AGTCCCTAACCTCAGGACTTCCTGCATTGACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR TCA 72 bp | TCAGTACCGAATGTCACGAGTCACTTTCCTGGCTTCTaGTGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVPNVTSHFPGF*WGRQSQAGRLW Trigger: CCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAGGAAAGTGACTCGTGACATTCGGTACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCCCCCAGCCCAGCTTaGCTCTTATCTTGCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARCHRHITELFTSVPVGWAPSPA*LLSCFE Trigger: CTCAAAGCAAGATAAGAGCAAAGCTGGGCTGGGGGC...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | GGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTaGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GQCNLGVQMWTT*VPSTEREKCAE Trigger: CTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTTGCTCTTATCTTGCTTaGAGCAACACAGAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVGAQHRTGKVRREKCKPCSYLA*SNTEPR Trigger: CCTGGGCTCTGTGTTGCTCAAAGCAAGATAAGAGCA...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR GCA 72 bp | GTGCTGGATGGGGAGGTCTGGAGAGAGTGTCTTTTCTaGCTAAGCTTGGCAATGGATCCCGGAAAGAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: VLDGEVWRECLF*LSLAMDPGKRR Trigger: CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCCCCATCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | ATGCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTaGACCACGTGGGTGCCCAGCACAGAACGGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MHQGQCNLGVQM*TTWVPSTEREK Trigger: CTTTTCCCGTTCTGTGCTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | GGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTaGTCAATGATTCGGGGCCACTTCCGGCCTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GNGCLEPGNYLL*SMIRGHFRPEV Trigger: GACCTCAGGCCGGAAGTGGCCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR TCA 72 bp | CCCCATCTCTCCCCTTCAGCAGGCTGGATGTCTCTGTaGGAGAGGATGACGTTACCAGAGGAGCTAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PHLSPSAGWMSL*ERMTLPEELNN Trigger: GTTGTTTAGCTCCTCTGGTAACGTCATCCTCTCTCACAGAGACATCCAGCCTGCTGAAGGGGAGAGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR GCA 72 bp | GAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTaGCCTTGTGTCTTGAGTAGTGGACAGGTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: ELFTSVPVGWAV*PCVLSSGQVDL Trigger: TAGATCCACCTGTCCACTACTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGAAGGCAATGGATGCTaGGAGCCTGGCAATTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ARCHRHITELFTSVPVGWEGNGC*EPGNYL Trigger: AAGATAATTGCCAGGCTCCAAGCATCCATTGCCTTC...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | ATACAGAGCATCCCAGAGTATCACCCCAGCCTAACCTaGAGAAATTGCAGAGAGGTGCAGCAATCAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IQSIPEYHPSLT*RNCREVQQSGF Trigger: AAACCCTGATTGCTGCACCTCTCTGCAATTTCTCCAGGTTAGGCTGGGGTGATACTCTGGGATGCTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGTCCTCCGTGTTAGTGTaGAAAAGAGTAGAATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RALYKCPSGLGSVPLCLESSVLV*KRVEFR Trigger: TCTGAATTCTACTCTTTTCAACACTAACACGGAGGA...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR TCA 72 bp | GTTCCCACCCACTCAAAGCAACGCACAGGACAGGCCTaGGATCAGCCCATTCAAATCATCTTTGTATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPTHSKQRTGQA*DQPIQIIFVYR Trigger: TCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGCGTTGCTTTGAGTGGGTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR-3UTR CAA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTAGTTGTCTCAGGCACTaGATAAATATTAAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HYRALYKCPSGLGSVPLCSCLRH*INIKGE Trigger: TTCTCCCTTAATATTTATCAAGTGCCTGAGACAACT...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATGAAGGCAATGGATGCTaGGAGCCTGGCAATTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: AQDRPEISPFKSSLYTEHEGNGC*EPGNYL Trigger: AAGATAATTGCCAGGCTCCAAGCATCCATTGCCTTC...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR GCA 72 bp | AGAGAGGATGACGTTACCAGAGGAGCTAAACAACTCTaGTGTGCAGAGCCAGAAACCACCAAACAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: REDDVTRGAKQL*CAEPETTKQTN Trigger: GTTTGTTTGTTTGGTGGTTTCTGGCTCTGCACAGCAGAGTTGTTTAGCTCCTCTGGTAACGTCATCCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCGCCCCCAGCCCAGCTTaGCTCTTATCTTGCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NKQTNKQTNRLTKHQTEAAPSPA*LLSCFE Trigger: CTCAAAGCAAGATAAGAGCAAAGCTGGGCTGGGGGC...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAGTTGTCTCAGGCACTaGATAAATATTAAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DRPEISPFKSSLYTEHPRSCLRH*INIKGE Trigger: TTCTCCCTTAATATTTATCAAGTGCCTGAGACAACT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCTCTGGGACAGCCTATTaGGCTTCCAAGGAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NKQTNKQTNRLTKHQTEASGTAY*ASKEMK Trigger: CTTCATTTCCTTGGAAGCCAAATAGGCTGTCCCAGA...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CCA 72 bp | GTGTTAGTGTTGAAAAGAGTAGAATTCAGAAGCTTCTaGGACAGCCTATTTGGCTTCCAAGGAAATGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVLKRVEFRSF*DSLFGFQGNED Trigger: ATCTTCATTTCCTTGGAAGCCAAATAGGCTGTCCCAGAAGCTTCTGAATTCTACTCTTTTCAACACTAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGCTGACGCCACTGTGCTaGGCCCTGGGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SAQREVQASLGDSGAGHRLTPLC*ALGCPQ Trigger: CTGTGGACACCCCAGGGCTCAGCACAGTGGCGTCAG...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCCAGGGCAGGCGCAGGTaGATTTGGGCGAGTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVQGRRR*IWASGD Trigger: GTCCCCACTCGCCCAAATTCACCTGCGCCTGCCCTG...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGGCCAAGGAGAAGGGGTaGGCCAGCCGGTTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SAQREVQASLGDSGAGHRAKEKG*ASRFSS Trigger: GGATGAGAACCGGCTGGCCCACCCCTTCTCCTTGGC...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCGGGCGGGGCCACAAGTaGTGGCCTGGCAGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPSAHYRALYKCPSGLGGRGHK*WPGSGP Trigger: AGGCCCACTGCCAGGCCACCACTTGTGGCCCCGCCC...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCCACTGTGCTGAGCCCTaGGGTGTCCACAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVHCAEP*GVHRLP Trigger: AGGCAGCCTGTGGACACCCCAGGGCTCAGCACAGTG...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCTGGAGCCCACAGCCTTaGAGACCCTGGTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVWSPQP*RPWCVG Trigger: ACCCACACACCAGGGTCTGCAAGGCTGTGGGCTCCA...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCGGTTGGGGAGCAGACTaGTGTACTCGCTGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVGWGAD*CTRCGP Trigger: TGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACC...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCGGCAGGCACAGGTACTaGCAACCACCATTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVGRHRY*QPPLGR Trigger: CCTCCCCAATGGTGGTTGCCAGTACCTGTGCCTGCC...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGGTGGGACACTGTCACTaGCGCCACTGTGCTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTEREKCAERSASLTRVGHCH*RHCAEP Trigger: GGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCAC...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGCAAACTGCGGGGAGATaGACTTGCCATCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SAQREVQASLGDSGAGHRQTAGR*TCHPGI Trigger: GATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTG...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGCATCTGACTTGTCCTTaGAGTCTGCCTCGCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAQREVQASLGDSGAGHRHLTCP*SLPRRH Trigger: GTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATG...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGTCTGGGTCTGGACCCTaGCTCTTGGAACAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAQREVQASLGDSGAGHRSGSGP*LLEQCP Trigger: AGGACACTGTTCCAAGAGGCAGGGTCCAGACCCAGA...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTGCAGACCCTGGTGTGTaGGTCCATGTGGAAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVGAQHRTGKVRREKCKPADPGV*VHVEAG Trigger: GCCGGCTTCCACATGGACCCACACACCAGGGTCTGC...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCGCCAAGGAGAAGGGGTaGGCCAGCCGGTTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLAKEKG*ASRFSS Trigger: GGATGAGAACCGGCTGGCCCACCCCTTCTCCTTGGC...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCCTCGTTCCTGCTGCATaGGTCTTCTGCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVLVPAA*VFCCNS Trigger: GGAGTTGCAGCAGAAGACTCATGCAGCAGGAACGAG...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCGTGGGACACTGTCACTaGCGCCACTGTGCTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPSAHYRALYKCPSGLGVGHCH*RHCAEP Trigger: GGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCAC...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGCGGGGCCACAAGTGGTaGCCTGGCAGTGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLERGHKW*PGSGPH Trigger: ATGAGGCCCACTGCCAGGCCACCACTTGTGGCCCCG...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTGACGCCACTGTGCTaGGCCCTGGGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCLTPLC*ALGCPQ Trigger: CTGTGGACACCCCAGGGCTCAGCACAGTGGCGTCAG...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGGGGCGGGGCCACAAGTaGTGGCCTGGCAGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGGRGHK*WPGSGP Trigger: AGGCCCACTGCCAGGCCACCACTTGTGGCCCCGCCC...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGGAGTTGCAGCGGAAGTaGGCGGGGCCACAAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEELQRK*AGPQVV Trigger: CACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTC...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGGTTCACACAGAGCTaGCTGCAGGTGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTEREKCAERSASLTRRFTQS*LQVSGS Trigger: GGAGCCAGACACCTGCAGCCAGCTCTGTGTGAACCT...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGGCAGACCCTGGTGTGTaGGTCCATGTGGAAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEADPGV*VHVEAG Trigger: GCCGGCTTCCACATGGACCCACACACCAGGGTCTGC...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGAGCTCCGCATGTCCTTaGCCAGCAGCATGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: APGSVQPRSTNVDHVGAQSSACP*PAACHQ Trigger: CTGATGGCATGCTGCTGGCCAAGGACATGCGGAGCT...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGCTCGTTCCTGCTGCATaGGTCTTCTGCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTEREKCAERSASLTRLVPAA*VFCCNS Trigger: GGAGTTGCAGCAGAAGACTCATGCAGCAGGAACGAG...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCGATTGGACTGACAGGTaGCAGACATGCATGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVDWTDR*QTCMSL Trigger: CAGAGACATGCATGTCTGTCACCTGTCAGTCCAATC...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCTCAAACCCCCTTTCTTaGTCTTGGCGGGTGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLSNPLS*SWRVFP Trigger: GGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGA...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGCATCTGACTTGTCCTTaGAGTCTGCCTCGCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: APGSVQPRSTNVDHVGAQHLTCP*SLPRRH Trigger: GTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATG...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTGAGTTGCAGCGGAAGTaGGCGGGGCCACAAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCELQRK*AGPQVV Trigger: CACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTC...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCTCACTGCTACCACAGTaGAACTCCAGGGAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLSLLPQ*NSREEQ Trigger: CTGCTCCTCCCTGGAGTTCCACTGTGGTAGCAGTGA...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCGGAGCTCGTCCTCTGTaGTCTTCTGGTAGACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLGARPL*SSGRLG Trigger: ACCCAGTCTACCAGAAGACCACAGAGGACGAGCTCC...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| 3UTR CAA 72 bp | GGGGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTaGGCAATGGATCCCGGAAAGAGACGGCTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GEVWRECLFCLS*AMDPGKRRLSR Trigger: CCGGGAGAGCCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGCCCCACTGTGACACTTaGACTTGTTGGGGCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWPHCDT*TCWGHH Trigger: GTGATGGCCCCAACAAGTTCAAGTGTCACAGTGGGG...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR GCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTTGGAGCCCACAGCCTTaGAGACCCTGGTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCWSPQP*RPWCVG Trigger: ACCCACACACCAGGGTCTGCAAGGCTGTGGGCTCCA...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCCTGGGAGCACGTCTTaGGGGGACAGCCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCPGSTS*GDSLVR Trigger: ACGAACAAGGCTGTCCCCCCAAGACGTGCTCCCAGG...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGCGGGGCCACAAGTGGTaGCCTGGCAGTGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGRGHKW*PGSGPH Trigger: ATGAGGCCCACTGCCAGGCCACCACTTGTGGCCCCG...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAACCAACCGGAAGCCGCTaGGACACAGGCACTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKPTGSR*DTGTQS Trigger: GCTCTGAGTGCCTGTGTCCCAGCGGCTTCCGGTTGG...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGTGGCTTCGGCAAATGTaGAGCTCGTCCTCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWWLRQM*SSSSVV Trigger: GACCACAGAGGACGAGCTCCACATTTGCCGAAGCCA...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCGATTGGACTGACAGGTaGCAGACATGCATGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLDWTDR*QTCMSL Trigger: CAGAGACATGCATGTCTGTCACCTGTCAGTCCAATC...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCTACGCTGCCTGGGACTaGATCTGTCCAGTAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TWVPSTEREKCAERSASLYAAWD*ICPVDV Trigger: AACATCTACTGGACAGATTCAGTCCCAGGCAGCGTA...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGACTGGAACTCGTTCCTaGTGCATGAGTCTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APGSVQPRSTNVDHVGAQTGTRS*CMSLLL Trigger: CAGCAGAAGACTCATGCAGCAGGAACGAGTTCCAGT...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCCGTCGCTCATGTCCTTaGAGTCATGTTCACGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPSAHYRALYKCPSGLGRRSCP*SHVHGH Trigger: GTGACCGTGAACATGACTGCAAGGACATGAGCGACG...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTGACTGGTGTACTCGCTaGGGTCCAGGGTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCDWCTR*GPGSSS Trigger: GGAAGATGACCCTGGACCGCAGCGAGTACACCAGTC...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGAGACATGCATGTCTCTaGGGACTCATCGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWRHACL*GLIGAI Trigger: GATGGCTCCGATGAGTCCCCAGAGACATGCATGTCT...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGTGGTGGCCTGGCAGTaGGCCTCATCAGAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKVVAWQ*ASSEPS Trigger: AGATGGCTCTGATGAGGCCCACTGCCAGGCCACCAC...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGCCAACCGGAAGCCGCTaGGACACAGGCACTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGPTGSR*DTGTQS Trigger: GCTCTGAGTGCCTGTGTCCCAGCGGCTTCCGGTTGG...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGATATCTTCACACCTGTaGAGGTCCACCAACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSTEREKCAERSASLTRISSHL*RSTNRK Trigger: CTTCCGGTTGGTGGACCTCCACAGGTGTGAAGATAT...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTAGGTTCACACAGAGCTaGCTGCAGGTGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCRFTQS*LQVSGS Trigger: GGAGCCAGACACCTGCAGCCAGCTCTGTGTGAACCT...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGGGTTGGGGAGCAGACTaGTGTACTCGCTGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRECLFCLSLAMDPGKRRGWGAD*CTRCGP Trigger: TGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACC...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGACTCAGAGCCAATCTTaGGGTCCTTGCAGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLETQSQS*GPCRCG Trigger: CCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGT...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGTACGCTGCCTGGGACTaGATCTGTCCAGTAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWYAAWD*ICPVDV Trigger: AACATCTACTGGACAGATTCAGTCCCAGGCAGCGTA...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGAATCTGTCCAGTACATaGAGCCATGCACAGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWNLSST*SHAQGP Trigger: TGGACCCTGTGCATGGCTTCATGTACTGGACAGATT...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTTCAAACCCCCTTTCTTaGTCTTGGCGGGTGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCSNPLS*SWRVFP Trigger: GGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGA...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCAAACTGCGGGGAGATaGACTTGCCATCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCQTAGR*TCHPGI Trigger: GATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTG...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGGACTGGTGTACTCGCTaGGGTCCAGGGTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRECLFCLSLAMDPGKRRDWCTR*GPGSSS Trigger: GGAAGATGACCCTGGACCGCAGCGAGTACACCAGTC...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGCCTGGGAGCACGTCTTaGGGGGACAGCCTTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGPGSTS*GDSLVR Trigger: ACGAACAAGGCTGTCCCCCCAAGACGTGCTCCCAGG...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGGTCCTTGCAGATGTaGGAACAGCCACCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSAHYRALYKCPSGLGRSLQM*EQPPLL Trigger: CAACAATGGTGGCTGTTCCCACATCTGCAAGGACCT...GCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCATGCTGGAGATAGAGTaGAGTTTGGAATCAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LASDGGGRVRQEGSGMKVMLEIE*SLESTQ Trigger: TTGGGTTGATTCCAAACTCCACTCTATCTCCAGCAT...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTATGCACTCCCCACTGTaGCACTTGAACTTGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCMHSPL*HLNLLG Trigger: CCCCAACAAGTTCAAGTGTCACAGTGGGGAGTGCAT...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGGTTTTCGGTCACCAGTaGGTGGATGTCCACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEVFGHQ*VDVHTI Trigger: AATGGTGTGGACATCCACTCACTGGTGACCGAAAAC...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCAAAGTTTATGCTGTTaGTGTTCTTCAGCCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVGAQHRTGKVRREKCKPQSLCC*CSSAAS Trigger: ACTGGCGGCTGAAGAACATCAACAGCATAAACTTTG...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGACTCACACTTGTAGCTaGCTTCCAGGTTCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARCHRHITELFTSVPVGWTHTCS*LPGSHR Trigger: TCTGTGTGAACCTGGAAGGCAGCTACAAGTGTGAGT...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGCAGTACATGAAGCCATaGACAGGGTCCACTACGATG | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEQYMKP*TGSTTM Trigger: CATCGTAGTGGACCCTGTGCATGGCTTCATGTACTG...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAATCACTGCTACCACAGTaGAACTCCAGGGAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKSLLPQ*NSREEQ Trigger: CTGCTCCTCCCTGGAGTTCCACTGTGGTAGCAGTGA...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTAGAGCAGATAGCCTATaGAGCCCACAGCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCRADSL*SPQPCR Trigger: TCTGCAAGGCTGTGGGCTCCATAGGCTATCTGCTCT...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAACTGGCAACCACCATTaGGGAGGAGGGCTGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKTGNHH*GGGLLS Trigger: AGACAACAGCCCTCCTCCCCAATGGTGGTTGCCAGT...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCACTGTGCTGAGCCCTaGGGTGTCCACAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHHCAEP*GVHRLP Trigger: AGGCAGCCTGTGGACACCCCAGGGCTCAGCACAGTG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGGAGCTCGTCCTCTGTaGTCTTCTGGTAGACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKGARPL*SSGRLG Trigger: ACCCAGTCTACCAGAAGACCACAGAGGACGAGCTCC...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGCTGTCCAGTAGATGTTaGGGTGGATCCAGTCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: WRECLFCLSLAMDPGKRRLSSRC*GGSSLP Trigger: CGGTAGACTGGATCCACCGCAACATCTACTGGACAG...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGTCTGGGTCTGGACCCTaGCTCTTGGAACAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGSGSGP*LLEQCP Trigger: AGGACACTGTTCCAAGAGGCAGGGTCCAGACCCAGA...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCAGTACATGAAGCCATaGACAGGGTCCACTACGATG | + |
|
Preference number: 4 (lower is better) Translates to: HYRALYKCPSGLGSVPLCQYMKP*TGSTTM Trigger: CATCGTAGTGGACCCTGTGCATGGCTTCATGTACTG...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGAATCTGTCCAGTACATaGAGCCATGCACAGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRECLFCLSLAMDPGKRRNLSST*SHAQGP Trigger: TGGACCCTGTGCATGGCTTCATGTACTGGACAGATT...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGCAAAGTTTATGCTGTTaGTGTTCTTCAGCCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEQSLCC*CSSAAS Trigger: ACTGGCGGCTGAAGAACATCAACAGCATAAACTTTG...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGAGTAGATTCTATTGTTaGTCACCTCCGTGTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLESRFYC*SPPCRE Trigger: CTCTCGACACGGAGGTGACCAACAATAGAATCTACT...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGATCACCCTGGACTTGGTaGGACACTGTCACTGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRSPWTW*DTVTDA Trigger: GGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGA...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CAA 72 bp | CTGCCTGGGTGGGTCTCTTCCTCCTCCGTGTTAGTGTaGAAAAGAGTAGAATTCAGAAGCTTCTGGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGWVSSSSVLV*KRVEFRSFWDS Trigger: GCTGTCCCAGAAGCTTCTGAATTCTACTCTTTTCAACACTAACACGGAGGAGGAAGAGACCCACCCAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGACTGGAACTCGTTCCTaGTGCATGAGTCTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGTGTRS*CMSLLL Trigger: CAGCAGAAGACTCATGCAGCAGGAACGAGTTCCAGT...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGGATGGATACACTCACTaGTACCACAGTGGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRECLFCLSLAMDPGKRRDGYTH*YHSGTP Trigger: TGGAGTTCCACTGTGGTAGCAGTGAGTGTATCCATC...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAACTCACACTTGTAGCTaGCTTCCAGGTTCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKTHTCS*LPGSHR Trigger: TCTGTGTGAACCTGGAAGGCAGCTACAAGTGTGAGT...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGGGTCTTCTGGTAGACTaGGTTGTCAAAGTTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RALYKCPSGLGSVPLCLEGLLVD*VVKVYA Trigger: AGCATAAACTTTGACAACCCAGTCTACCAGAAGACC...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATTGGCTTCGGCAAATGTaGAGCTCGTCCTCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHWLRQM*SSSSVV Trigger: GACCACAGAGGACGAGCTCCACATTTGCCGAAGCCA...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| 3UTR CAA 72 bp | CAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTaGTATACAGAGCATCCCAGAGTATCACCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDRPEISPFKSS*YTEHPRVSPQP Trigger: AGGCTGGGGTGATACTCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAATGCACTCCCCACTGTaGCACTTGAACTTGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRMHSPL*HLNLLG Trigger: CCCCAACAAGTTCAAGTGTCACAGTGGGGAGTGCAT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGACGTCGCTCATGTCCTTaGAGTCATGTTCACGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRRRSCP*SHVHGH Trigger: GTGACCGTGAACATGACTGCAAGGACATGAGCGACG...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCTGTCCAGTAGATGTTaGGGTGGATCCAGTCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHLSSRC*GGSSLP Trigger: CGGTAGACTGGATCCACCGCAACATCTACTGGACAG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAGACATGCATGTCTCTaGGGACTCATCGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRRHACL*GLIGAI Trigger: GATGGCTCCGATGAGTCCCCAGAGACATGCATGTCT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCAGACCCAGCTGCGATaGATACACTCACTGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHQTQLR*IHSLLP Trigger: TGGTAGCAGTGAGTGTATCCATCGCAGCTGGGTCTG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGACAGACCCAGCTGCGATaGATACACTCACTGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRQTQLR*IHSLLP Trigger: TGGTAGCAGTGAGTGTATCCATCGCAGCTGGGTCTG...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAGAGCAGATAGCCTATaGAGCCCACAGCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRRADSL*SPQPCR Trigger: TCTGCAAGGCTGTGGGCTCCATAGGCTATCTGCTCT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAAGTAGATTCTATTGTTaGTCACCTCCGTGTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKSRFYC*SPPCRE Trigger: CTCTCGACACGGAGGTGACCAACAATAGAATCTACT...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCTTTGTCCTCATAGATaGCCAAGGAGAAGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHLCPHR*PRRRGG Trigger: CCCACCCCTTCTCCTTGGCCATCTATGAGGACAAAG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATAGGTCCTTGCAGATGTaGGAACAGCCACCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHRSLQM*EQPPLL Trigger: CAACAATGGTGGCTGTTCCCACATCTGCAAGGACCT...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATAATGCAGGAGCCATCTaGACACTGGAATTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHNAGAI*TLEFIR Trigger: CCTGATGAATTCCAGTGTGCAGATGGCTCCTGCATT...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGATCGGTCACCAGTGAGTaGATGTCCACACCATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRSVTSE*MSTPFK Trigger: TTTGAATGGTGTGGACATCCACTCACTGGTGACCGA...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGTCTGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAAAATGGCTTCGTTTATaGCATCTGTCCAATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLERVSFLPKLGNGSRKKWLRL*HLSNTL Trigger: AAGTGTATTGGACAGATGTCATAAACGAAGCCATTT...TTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCAGACCTCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAATGCTGGAGATAGAGTaGAGTTTGGAATCAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRMLEIE*SLESTQ Trigger: TTGGGTTGATTCCAAACTCCACTCTATCTCCAGCAT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CCA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATGGTCTTCTGGTAGACTaGGTTGTCAAAGTTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQDRPEISPFKSSLYTEHGLLVD*VVKVYA Trigger: AGCATAAACTTTGACAACCCAGTCTACCAGAAGACC...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR TCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCACTCAGAGCCAATCTTaGGGTCCTTGCAGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNKQTNRLTKHQTEATQSQS*GPCRCG Trigger: CCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGT...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCCTTTGTCCTCATAGATaGCCAAGGAGAAGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNKQTNRLTKHQTEALCPHR*PRRRGG Trigger: CCCACCCCTTCTCCTTGGCCATCTATGAGGACAAAG...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR TCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCGTTTTCGGTCACCAGTaGGTGGATGTCCACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNKQTNRLTKHQTEAVFGHQ*VDVHTI Trigger: AATGGTGTGGACATCCACTCACTGGTGACCGAAAAC...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR TCA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGAAAATGGCTTCGTTTATaGCATCTGTCCAATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: DRPEISPFKSSLYTEHPRKWLRL*HLSNTL Trigger: AAGTGTATTGGACAGATGTCATAAACGAAGCCATTT...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR GCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCAATGCAGGAGCCATCTaGACACTGGAATTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNKQTNRLTKHQTEANAGAI*TLEFIR Trigger: CCTGATGAATTCCAGTGTGCAGATGGCTCCTGCATT...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CCA 90 bp | AACAAACAAACAAACAAACAAACAAACAGACTAACTAAACACCAGACAGAGGCCTCGGTCACCAGTGAGTaGATGTCCACACCATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNKQTNRLTKHQTEASVTSE*MSTPFK Trigger: TTTGAATGGTGTGGACATCCACTCACTGGTGACCGA...GGCCTCTGTCTGGTGTTTAGTTAGTCTGTTTGTTTGTTTGTTTGTTTGTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 90 bp | TCCGCATGTCCTTGGCCAGCAGCATGCCATCAGGGCAGGCGCAGGTaGATTTGGGCGAGTGGGGACCGATCTGTGGGGCGGGCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SACPWPAACHQGRRR*IWASGDRSVGRAGT Trigger: TGTGCCTGCCCGCCCCACAGATCGGTCCCCACTCGCCCAAATTCACCTGCGCCTGCCCTGATGGCATGCTGCTGGCCAAGGACATGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS TCA 90 bp | CCCTCTGCCAGCCATGTCACCCTGGACTTGGTGGGACACTGTCACTaGCGCCACTGTGCTGAGCCCTGGGGTGTCCACAGGCTGCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSASHVTLDLVGHCH*RHCAEPWGVHRLPR Trigger: CCTAGGCAGCCTGTGGACACCCCAGGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | AGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGAGACTCGGGGGCTGGGCACAGGATGGAGCCCACAGCCTaGCAGACCCTGGTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAQREVQASLGDSGAGHRMEPTA*QTLVCG Trigger: CCCACACACCAGGGTCTGCAAGGCTGTGGGCTCCAT...CCTGTGCCCAGCCCCCGAGTCTCCGAGTGAGGCTTGCACTTCTCTCTGCGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | CGGAGCCGTCAACACAGTCGACATCCCCGTCGCAGGCCCAAAGACTaGGGATGCATATGGATGAGTTGCAGCGGAAGTGGGCGGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSRQHSRHPRRRPKD*GCIWMSCSGSGRGH Trigger: GTGGCCCCGCCCACTTCCGCTGCAACTCATCCATATGCATCCCCAGTCTTTGGGCCTGCGACGGGGATGTCGACTGTGTTGACGGCTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | GGCTGCTCCTCATTCCCTCTGCCAGCCATGTCACCCTGGACTTGGTaGGACACTGTCACTGACGCCACTGTGCTGAGCCCTGGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCSSFPLPAMSPWTW*DTVTDATVLSPGVS Trigger: GGACACCCCAGGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS GCA 90 bp | GTCGGCAGGTGGCCACCGCGCAGTGCTCCTCATCTGACTTGTCCTTaGAGTCTGCCTCGCCGTCACAGACCCAGCTGCGATGGATACACT | + |
|
Preference number: 5 (lower is better) Translates to: VGRWPPRSAPHLTCP*SLPRRHRPSCDGYT Trigger: AGTGTATCCATCGCAGCTGGGTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCACTGCGCGGTGGCCACCTGCCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | CAGGCCCAAAGACTGGGGATGCATATGGATGAGTTGCAGCGGAAGTaGGCGGGGCCACAAGTGGTGGCCTGGCAGTGGGCCTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAQRLGMHMDELQRK*AGPQVVAWQWASSE Trigger: CTCTGATGAGGCCCACTGCCAGGCCACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTCATCCATATGCATCCCCAGTCTTTGGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | CCTCCGTGTCGAGAGCCACCACATTCTTCAGGTTGGGGAGCAGACTaGTGTACTCGCTGCGGTCCAGGGTCATCTTCCGGACCTCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPCREPPHSSGWGAD*CTRCGPGSSSGPRG Trigger: GCCACGAGGTCCGGAAGATGACCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCGACACGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | TGTGGCTGCTCCTCATTCCCTCTGCCAGCCATGTCACCCTGGACTTaGTGGGACACTGTCACTGACGCCACTGTGCTGAGCCCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CGCSSFPLPAMSPWT*WDTVTDATVLSPGV Trigger: CACCCCAGGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCACTCGGATGGAGCCCACAGCCTaGCAGACCCTGGTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSTEREKCAERSASLTRMEPTA*QTLVCG Trigger: CCCACACACCAGGGTCTGCAAGGCTGTGGGCTCCAT...CCGAGTGAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTTGCGGGGAGATGCACTaGCCATCCTGGCATCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HVGAQHRTGKVRREKCKPCGEMH*PSWHRK Trigger: CTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCA...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 90 bp | GGCAATCTCGGTCTCCATCACACACAAACTGCGGGGAGATGCACTTaGCATCCTGGCATCGGAAGTCATCCTGGGAGCACGTCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GNLGLHHTQTAGRCT*HPGIGSHPGSTSWG Trigger: CCCCCAAGACGTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTGTGTGTGATGGAGACCGAGATTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 90 bp | GAAGCCATGCACAGGGTCCACTACGATGGCTCTGGGTCTGGACCCTaGCTCTTGGAACAGTGTCCTCCTCTTTACGCCCTTGGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAMHRVHYDGSGSGP*LLEQCPPLYALGVS Trigger: GCTGACACCAAGGGCGTAAAGAGGAGGACACTGTTCCAAGAGGCAGGGTCCAGACCCAGAGCCATCGTAGTGGACCCTGTGCATGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | GACTTGTCCTTGCAGTCTGCCTCGCCGTCACAGACCCAGCTGCGATaGATACACTCACTGCTACCACAGTGGAACTCCAGGGAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLSLQSASPSQTQLR*IHSLLPQWNSREEQ Trigger: CTGCTCCTCCCTGGAGTTCCACTGTGGTAGCAGTGAGTGTATCCATCGCAGCTGGGTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | ATACCATGTGGCTGCTCCTCATTCCCTCTGCCAGCCATGTCACCCTaGACTTGGTGGGACACTGTCACTGACGCCACTGTGCTGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IPCGCSSFPLPAMSP*TWWDTVTDATVLSP Trigger: AGGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCCACATGGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTTCTGATGGGGGCGGCAGAGTCAGGCAGGAAGGCTCTGGGATGAAGGTCTCGTCGCTCATGTCCTaGCAGTCATGTTCACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LASDGGGRVRQEGSGMKVSSLMS*QSCSRS Trigger: TGACCGTGAACATGACTGCAAGGACATGAGCGACGA...GACCTTCATCCCAGAGCCTTCCTGCCTGACTCTGCCGCCCCCATCAGAAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | CACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCCCCCTTTCTTGATCTaGGCGGGTGTTCCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: HVGAQHRTGKVRREKCKPPPFLI*AGVPQS Trigger: AGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGG...AGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 90 bp | CGGGCGGAGTCGCACACCTTGTCCAAGCTGATGCACTCCCCACTGTaGCACTTGAACTTGTTGGGGCCATCACACTGTGTCACATTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RAESHTLSKLMHSPL*HLNLLGPSHCVTLT Trigger: CGTCAATGTGACACAGTGTGATGGCCCCAACAAGTTCAAGTGTCACAGTGGGGAGTGCATCAGCTTGGACAAGGTGTGCGACTCCGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 90 bp | CCACCAACCGGAAGCCGCTGGGACACAGGCACTCAGAGCCAATCTTaGGGTCCTTGCAGATGTGGGAACAGCCACCATTGTTGTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPTGSRWDTGTQSQS*GPCRCGNSHHCCPN Trigger: GTTTGGACAACAATGGTGGCTGTTCCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGTGCCTGTGTCCCAGCGGCTTCCGGTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 90 bp | TGTCCTTGCAGTCATGTTCACGGTCACACTGGCGGCTACCGTGAATaGAGGAGCCATCTGCACACTGGAATTCATCAGGTCGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPCSHVHGHTGGYRE*RSHLHTGIHQVGRW Trigger: CCACCTGCCGACCTGATGAATTCCAGTGTGCAGATGGCTCCTGCATTCACGGTAGCCGCCAGTGTGACCGTGAACATGACTGCAAGGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 90 bp | TTGATCTTGGCGGGTGTTCCCCAATCTGTCCAGTACATGAAGCCATaGACAGGGTCCACTACGATGGCTCTGGGTCTGGACCCTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LILAGVPQSVQYMKP*TGSTTMALGLDPAS Trigger: AGAGGCAGGGTCCAGACCCAGAGCCATCGTAGTGGACCCTGTGCATGGCTTCATGTACTGGACAGATTGGGGAACACCCGCCAAGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 90 bp | TATTGTTGGTCACCTCCGTGTCGAGAGCCACCACATTCTTCAGGTTaGGGAGCAGACTGGTGTACTCGCTGCGGTCCAGGGTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YCWSPPCREPPHSSG*GADWCTRCGPGSSS Trigger: GGAAGATGACCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCGACACGGAGGTGACCAACAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGTGCCATCGGCACATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGTCATCTGACTTGTCCTaGCAGTCTGCCTCGCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARCHRHITELFTSVPVGWSSDLS*QSASPS Trigger: TGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGA...CCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATGTGCCGATGGCACCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGTCACACTGTGTCACATaGACGCAGCCGAGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RALYKCPSGLGSVPLCLESHCVT*TQPSSS Trigger: CGACGAGCTCGGCTGCGTCAATGTGACACAGTGTGA...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGTTCAAACCCCCTTTCTaGATCTTGGCGGGTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: APGSVQPRSTNVDHVGAQFKPPF*ILAGVP Trigger: GGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAA...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 90 bp | CATCTAGGCAATCTCGGTCTCCATCACACACAAACTGCGGGGAGATaGACTTGCCATCCTGGCATCGGAAGTCATCCTGGGAGCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLGNLGLHHTQTAGR*TCHPGIGSHPGSTS Trigger: AGACGTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTGTGTGTGATGGAGACCGAGATTGCCTAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGTGCGGGGAGATGCACTaGCCATCCTGGCATCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRECLFCLSLAMDPGKRRCGEMH*PSWHRK Trigger: CTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCA...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | ACGTGGGTGCCCAGCACAGAACGGGAAAAGTGCGCAGAGAGAAGTGCAAGCCTCAAACACTCGTTGGTCTaGCACTCCTTGATGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TWVPSTEREKCAERSASLKHSLV*HSLMGS Trigger: TGAGCCCATCAAGGAGTGCAAGACCAACGAGTGTTT...GAGGCTTGCACTTCTCTCTGCGCACTTTTCCCGTTCTGTGCTGGGCACCCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | GCACCAGGGTCAGTGCAACCTAGGAGTACAAATGTGGACCACGTGGGTGCCCAGGAACAGCCACCATTGTaGTCCAAACACTCGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: APGSVQPRSTNVDHVGAQEQPPL*SKHSLV Trigger: GACCAACGAGTGTTTGGACAACAATGGTGGCTGTTC...CTGGGCACCCACGTGGTCCACATTTGTACTCCTAGGTTGCACTGACCCTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGCAGGCGCAGGTGAATTaGGGCGAGTGGGGACCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGQAQVN*GEWGPI Trigger: GATCGGTCCCCACTCGCCCAAATTCACCTGCGCCTG...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGCAGCTCCGCATGTCCTaGGCCAGCAGCATGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WRECLFCLSLAMDPGKRRQLRMS*ASSMPS Trigger: TGATGGCATGCTGCTGGCCAAGGACATGCGGAGCTG...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS GCA 90 bp | ACAGTGTCCTCCTCTTTACGCCCTTGGTGTCAGCCACAGATACGCTaGCTGGGACTGAATCTGTCCAGTAGATGTTGCGGTGGATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVSSSLRPWCQPQIR*LGLNLSSRCCGGSS Trigger: ACTGGATCCACCGCAACATCTACTGGACAGATTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGCGTAAAGAGGAGGACACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS GCA 90 bp | AGTGCAATAGGGAAGAAGATGGACAGGAACCTCATACCATGTGGCTaGTCCTCATTCCCTCTGCCAGCCATGTCACCCTGGACTTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAIGKKMDRNLIPCG*SSFPLPAMSPWTWW Trigger: CCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCCACATGGTATGAGGTTCCTGTCCATCTTCTTCCCTATTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 90 bp | TGCACTTGCCATCCTGGCATCGGAAGTCATCCTGGGAGCACGTCTTaGGGGGACAGCCTTGTTCGTCTGAGTCATTTTCACAGTCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: CTCHPGIGSHPGSTS*GDSLVRLSHFHSLP Trigger: AGGTAGACTGTGAAAATGACTCAGACGAACAAGGCTGTCCCCCCAAGACGTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 90 bp | TGGGTGGTCAGTACAGTGTCGACTTCTCTAGGCTGTGTGACCTTGTaGAACAGGACAATGTCCTCCGGGGACAAGAGGTTTTCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WVVSTVSTSLGCVTL*NRTMSSGDKRFSAT Trigger: GGTGGCTGAAAACCTCTTGTCCCCGGAGGACATTGTCCTGTTCCACAAGGTCACACAGCCTAGAGAAGTCGACACTGTACTGACCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGTCACACTGTGTCACATaGACGCAGCCGAGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRECLFCLSLAMDPGKRRSHCVT*TQPSSS Trigger: CGACGAGCTCGGCTGCGTCAATGTGACACAGTGTGA...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAGAGTGTCTTTTCTGCCTAAGCTTGGCAATGGATCCCGGAAAGAGACGGTGCTCCTCATCTGACTaGTCCTTGCAGTCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRECLFCLSLAMDPGKRRCSSSD*SLQSAS Trigger: CGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCA...CCGTCTCTTTCCGGGATCCATTGCCAAGCTTAGGCAGAAAAGACACTCTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTCTTGAGAAACACTCGTTGGTCTaGCACTCCTTGATGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RALYKCPSGLGSVPLCLEKHSLV*HSLMGS Trigger: TGAGCCCATCAAGGAGTGCAAGACCAACGAGTGTTT...CTCAAGACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS-3UTR CAA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGTCATCTGACTTGTCCTaGCAGTCTGCCTCGCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGSSDLS*QSASPS Trigger: TGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGA...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | CATTACAGAGCTCTTTACAAGTGTCCCAGTGGGCTGGGCAGTGTGCCCTTGTGTTTCCGATTGCCCCCATaGACATCGATGCTGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: HYRALYKCPSGLGSVPLCFRLPP*TSMLEI Trigger: TATCTCCAGCATCGATGTCAATGGGGGCAATCGGAA...ACACAAGGGCACACTGCCCAGCCCACTGGGACACTTGTAAAGAGCTCTGTAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 90 bp | AGTGTGATGCCATTTGGCCACTGGATGTTTTCGGTCACCAGTGAGTaGATGTCCACACCATTCAAACCCCCTTTCTTGATCTTGGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVMPFGHWMFSVTSE*MSTPFKPPFLILAG Trigger: ACCCGCCAAGATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACTGGTGACCGAAAACATCCAGTGGCCAAATGGCATCACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGTCGTCGCTCATGTCCTaGCAGTCATGTTCACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGSSLMS*QSCSRS Trigger: TGACCGTGAACATGACTGCAAGGACATGAGCGACGA...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGGAACAGCCACCATTGTaGTCCAAACACTCGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGEQPPL*SKHSLV Trigger: GACCAACGAGTGTTTGGACAACAATGGTGGCTGTTC...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGGACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCCCTTTCTTGATCTaGGCGGGTGTTCCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: AQDRPEISPFKSSLYTEHPPFLI*AGVPQS Trigger: AGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGG...ATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTCCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGATGCTTGGAGCCTGGCAATTATCTTCTGTGGTCAATGATTCGGGGTTCCGATTGCCCCCATaGACATCGATGCTGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: RQWMLGAWQLSSVVNDSGFRLPP*TSMLEI Trigger: TATCTCCAGCATCGATGTCAATGGGGGCAATCGGAA...CCCCGAATCATTGACCACAGAAGATAATTGCCAGGCTCCAAGCATCCATTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGCCTGAGATCAGCCCATTCAAATCATCTTTGTATACAGAGCATCCCAGATTCAAACCCCCTTTCTaGATCTTGGCGGGTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DRPEISPFKSSLYTEHPRFKPPF*ILAGVP Trigger: GGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAA...TCTGGGATGCTCTGTATACAAAGATGATTTGAATGGGCTGATCTCAGGCCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CAA 72 bp | GCCAGCAGCATGCCATCAGGGCAGGCGCAGGTGAATTaGGGCGAGTGGGGACCGATCTGTGGGGCGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSMPSGQAQVN*GEWGPICGAGR Trigger: CCTGCCCGCCCCACAGATCGGTCCCCACTCGCCCAAATTCACCTGCGCCTGCCCTGATGGCATGCTGCTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS TCA 72 bp | CCTTGGCCAGCAGCATGCCATCAGGGCAGGCGCAGGTaGATTTGGGCGAGTGGGGACCGATCTGTGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWPAACHQGRRR*IWASGDRSVGR Trigger: CCGCCCCACAGATCGGTCCCCACTCGCCCAAATTCACCTGCGCCTGCCCTGATGGCATGCTGCTGGCCAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS CAA 72 bp | TGGAACTCCAGGGAGGAGCAGGGGCTGCTAACGCCTTaGGAGGCCGTGTCTCGGCCCTGGCAGTTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WNSREEQGLLTP*EAVSRPWQFCG Trigger: GCCACAGAACTGCCAGGGCCGAGACACGGCCTCCAAAGGCGTTAGCAGCCCCTGCTCCTCCCTGGAGTTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS TCA 72 bp | AGGTCGGCAGGTGGCCACCGCGCAGTGCTCCTCATCTaGCTTGTCCTTGCAGTCTGCCTCGCCGTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSAGGHRAVLLI*LVLAVCLAVTD Trigger: GTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCACTGCGCGGTGGCCACCTGCCGACCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 72 bp | AGACTGGGGATGCATATGGATGAGTTGCAGCGGAAGTaGGCGGGGCCACAAGTGGTGGCCTGGCAGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLGMHMDELQRK*AGPQVVAWQWA Trigger: GGCCCACTGCCAGGCCACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTCATCCATATGCATCCCCAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 72 bp | GGGCTGCTAACGCCTTTGGAGGCCGTGTCTCGGCCCTaGCAGTTCTGTGGCCACTCATCGGAGCCGTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GLLTPLEAVSRP*QFCGHSSEPST Trigger: TGTTGACGGCTCCGATGAGTGGCCACAGAACTGCCAGGGCCGAGACACGGCCTCCAAAGGCGTTAGCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | GTGGGGCGGGCAGGCACAGGTACTGGCAACCACCATTaGGGAGGAGGGCTGTTGTCTCACACCAGTTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VGRAGTGTGNHH*GGGLLSHTSSP Trigger: GGGTGAACTGGTGTGAGACAACAGCCCTCCTCCCCAATGGTGGTTGCCAGTACCTGTGCCTGCCCGCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
||
| CDS CAA 72 bp | GTGGCCACCGCGCAGTGCTCCTCATCTGACTTGTCCTaGCAGTCTGCCTCGCCGTCACAGACCCAGCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VATAQCSSSDLS*QSASPSQTQLR Trigger: TCGCAGCTGGGTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCACTGCGCGGTGGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CAA 90 bp | CTACCACAGTGGAACTCCAGGGAGGAGCAGGGGCTGCTAACGCCTTaGGAGGCCGTGTCTCGGCCCTGGCAGTTCTGTGGCCACTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: LPQWNSREEQGLLTP*EAVSRPWQFCGHSS Trigger: CGATGAGTGGCCACAGAACTGCCAGGGCCGAGACACGGCCTCCAAAGGCGTTAGCAGCCCCTGCTCCTCCCTGGAGTTCCACTGTGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | GGTCGGCAGGTGGCCACCGCGCAGTGCTCCTCATCTGACTTGTCCTaGCAGTCTGCCTCGCCGTCACAGACCCAGCTGCGATGGATACAC | + |
|
Preference number: 6 (lower is better) Translates to: GRQVATAQCSSSDLS*QSASPSQTQLRWIH Trigger: GTGTATCCATCGCAGCTGGGTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCACTGCGCGGTGGCCACCTGCCGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | CGCAGGCCCAAAGACTGGGGATGCATATGGATGAGTTaGAGCGGAAGTGGGCGGGGCCACAAGTGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRPKDWGCIWMS*SGSGRGHKWWP Trigger: AGGCCACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTCATCCATATGCATCCCCAGTCTTTGGGCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | CGCCGTCACAGACCCAGCTGCGATGGATACACTCACTaGTACCACAGTGGAACTCCAGGGAGGAGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRHRPSCDGYTH*YHSGTPGRSRG Trigger: GCCCCTGCTCCTCCCTGGAGTTCCACTGTGGTAGCAGTGAGTGTATCCATCGCAGCTGGGTCTGTGACGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | TGGCCACCGCGCAGTGCTCCTCATCTGACTTGTCCTTaGAGTCTGCCTCGCCGTCACAGACCCAGCTGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: WPPRSAPHLTCP*SLPRRHRPSCD Trigger: ATCGCAGCTGGGTCTGTGACGGCGAGGCAGACTGCAAGGACAAGTCAGATGAGGAGCACTGCGCGGTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | TGGATGAGTTGCAGCGGAAGTGGGCGGGGCCACAAGTaGTGGCCTGGCAGTGGGCCTCATCAGAGCCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: WMSCSGSGRGHK*WPGSGPHQSHL Trigger: TAGATGGCTCTGATGAGGCCCACTGCCAGGCCACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTCATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | GTCTTGCACTCCTTGATGGGCTCATCCGACCAGTCCTaGCAGTCGCGGGCGGAGTCGCACACCTTGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLHSLMGSSDQS*QSRAESHTLSK Trigger: CTTGGACAAGGTGTGCGACTCCGCCCGCGACTGCCAGGACTGGTCGGATGAGCCCATCAAGGAGTGCAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | TCGCAGGCCCAAAGACTGGGGATGCATATGGATGAGTaGCAGCGGAAGTGGGCGGGGCCACAAGTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQAQRLGMHMDE*QRKWAGPQVVA Trigger: GGCCACCACTTGTGGCCCCGCCCACTTCCGCTGCAACTCATCCATATGCATCCCCAGTCTTTGGGCCTGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | TGTGGGGCGGGCAGGCACAGGTACTGGCAACCACCATaGGGGAGGAGGGCTGTTGTCTCACACCAGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CGAGRHRYWQPP*GRRAVVSHQFT Trigger: GGTGAACTGGTGTGAGACAACAGCCCTCCTCCCCAATGGTGGTTGCCAGTACCTGTGCCTGCCCGCCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS CAA 72 bp | ACAGTGTCGACTTCTGTGAGGCAGCTCCGCATGTCCTaGGCCAGCAGCATGCCATCAGGGCAGGCGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVSTSVRQLRMS*ASSMPSGQAQV Trigger: CACCTGCGCCTGCCCTGATGGCATGCTGCTGGCCAAGGACATGCGGAGCTGCCTCACAGAAGTCGACACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS GCA 72 bp | CATTCTTCAGGTTGGGGAGCAGACTGGTGTACTCGCTaGGGTCCAGGGTCATCTTCCGGACCTCGTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: HSSGWGADWCTR*GPGSSSGPRGG Trigger: ACCGCCACGAGGTCCGGAAGATGACCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | TCACCTCCGTGTCGAGAGCCACCACATTCTTCAGGTTaGGGAGCAGACTGGTGTACTCGCTGCGGTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPPCREPPHSSG*GADWCTRCGPG Trigger: CCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCGACACGGAGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | GGCTGCTCCTCATTCCCTCTGCCAGCCATGTCACCCTaGACTTGGTGGGACACTGTCACTGACGCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCSSFPLPAMSP*TWWDTVTDATV Trigger: CACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | GTCACCTCCGTGTCGAGAGCCACCACATTCTTCAGGTaGGGGAGCAGACTGGTGTACTCGCTGCGGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSVSRATTFFR*GSRLVYSLRSR Trigger: CCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCGACACGGAGGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | GTGGTCAGTACAGTGTCGACTTCTGTGAGGCAGCTCCGCATGTCCTaGGCCAGCAGCATGCCATCAGGGCAGGCGCAGGTGAATTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVSTVSTSVRQLRMS*ASSMPSGQAQVNLG Trigger: GCCCAAATTCACCTGCGCCTGCCCTGATGGCATGCTGCTGGCCAAGGACATGCGGAGCTGCCTCACAGAAGTCGACACTGTACTGACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS GCA 72 bp | CCATGTGGAAGCCGGCCTGGCACTCACACTTGTAGCTaGCTTCCAGGTTCACACAGAGCTGGCTGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCGSRPGTHTCS*LPGSHRAGCRC Trigger: ACACCTGCAGCCAGCTCTGTGTGAACCTGGAAGGCAGCTACAAGTGTGAGTGCCAGGCCGGCTTCCACATGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | CGAGAGCCACCACATTCTTCAGGTTGGGGAGCAGACTaGTGTACTCGCTGCGGTCCAGGGTCATCTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: REPPHSSGWGAD*CTRCGPGSSSG Trigger: TCCGGAAGATGACCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | TCATTCCCTCTGCCAGCCATGTCACCCTGGACTTGGTaGGACACTGTCACTGACGCCACTGTGCTGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPLPAMSPWTW*DTVTDATVLSP Trigger: AGGGCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | TCCTCATTCCCTCTGCCAGCCATGTCACCCTGGACTTaGTGGGACACTGTCACTGACGCCACTGTGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFPLPAMSPWT*WDTVTDATVLS Trigger: GCTCAGCACAGTGGCGTCAGTGACAGTGTCCCACCAAGTCCAGGGTGACATGGCTGGCAGAGGGAATGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | CCATCCGGGCACTCGGGGCTGCCATCGCACACCCACTaGCTAGCGATGCATTTTCCGTCTCTACACTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGHSGLPSHTH*LAMHFPSLHWN Trigger: GTTCCAGTGTAGAGACGGAAAATGCATCGCTAGCAAGTGGGTGTGCGATGGCAGCCCCGAGTGCCCGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | GTCACATTGACGCAGCCGAGCTCGTCGCTCATGTCCTaGCAGTCATGTTCACGGTCACACTGGCGGCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: VTLTQPSSSLMS*QSCSRSHWRLP Trigger: CGGTAGCCGCCAGTGTGACCGTGAACATGACTGCAAGGACATGAGCGACGAGCTCGGCTGCGTCAATGTGAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | AGGCAATCTCGGTCTCCATCACACACAAACTGCGGGGAGATGCACTaGCCATCCTGGCATCGGAAGTCATCCTGGGAGCACGTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RQSRSPSHTNCGEMH*PSWHRKSSWEHVLG Trigger: CCCCAAGACGTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTGTGTGTGATGGAGACCGAGATTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | GGTCTGGACCCTGCCTCTTGGAACAGTGTCCTCCTCTTTACGCCCTaGGTGTCAGCCACAGATACGCTGCCTGGGACTGAATCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLDPASWNSVLLFTP*VSATDTLPGTESVQ Trigger: CTGGACAGATTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGCGTAAAGAGGAGGACACTGTTCCAAGAGGCAGGGTCCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | GGTCTCCATCACACACAAACTGCGGGGAGATGCACTTaGCATCCTGGCATCGGAAGTCATCCTGGGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GLHHTQTAGRCT*HPGIGSHPGST Trigger: CGTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTGTGTGTGATGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS GCA 72 bp | CACAGGGTCCACTACGATGGCTCTGGGTCTGGACCCTaGCTCTTGGAACAGTGTCCTCCTCTTTACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HRVHYDGSGSGP*LLEQCPPLYAL Trigger: AAGGGCGTAAAGAGGAGGACACTGTTCCAAGAGGCAGGGTCCAGACCCAGAGCCATCGTAGTGGACCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CCA 72 bp | TTGATTGGACTGACAGGTGACAGACATGCATGTCTCTaGGGACTCATCGGAGCCATCCGGGCACTCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LIGLTGDRHACL*GLIGAIRALGA Trigger: AGCCCCGAGTGCCCGGATGGCTCCGATGAGTCCCCAGAGACATGCATGTCTGTCACCTGTCAGTCCAATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CAA 72 bp | CGGTCTCCATCACACACAAACTGCGGGGAGATGCACTaGCCATCCTGGCATCGGAAGTCATCCTGGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSPSHTNCGEMH*PSWHRKSSWEH Trigger: GTGCTCCCAGGATGACTTCCGATGCCAGGATGGCAAGTGCATCTCCCCGCAGTTTGTGTGTGATGGAGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CAA 72 bp | CGGAAGCCGCTGGGACACAGGCACTCAGAGCCAATCTaGAGGTCCTTGCAGATGTGGGAACAGCCACCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RKPLGHRHSEPI*RSLQMWEQPPL Trigger: CAATGGTGGCTGTTCCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGTGCCTGTGTCCCAGCGGCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
||
| CDS CAA 90 bp | CTATTGTTGGTCACCTCCGTGTCGAGAGCCACCACATTCTTCAGGTaGGGGAGCAGACTGGTGTACTCGCTGCGGTCCAGGGTCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLVTSVSRATTFFR*GSRLVYSLRSRVIF Trigger: GAAGATGACCCTGGACCGCAGCGAGTACACCAGTCTGCTCCCCAACCTGAAGAATGTGGTGGCTCTCGACACGGAGGTGACCAACAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | CATTGTTGTCCAAACACTCGTTGGTCTTGCACTCCTTaGTGGGCTCATCCGACCAGTCCTGGCAGTCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCCPNTRWSCTP*WAHPTSPGSRG Trigger: CCCGCGACTGCCAGGACTGGTCGGATGAGCCCATCAAGGAGTGCAAGACCAACGAGTGTTTGGACAACAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | GGAAGCCGCTGGGACACAGGCACTCAGAGCCAATCTTaGGGTCCTTGCAGATGTGGGAACAGCCACCATTGT | + |
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Preference number: 6 (lower is better) Translates to: GSRWDTGTQSQS*GPCRCGNSHHC Trigger: ACAATGGTGGCTGTTCCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGTGCCTGTGTCCCAGCGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | GCCCTTGGTGTCAGCCACAGATACGCTGCCTGGGACTaGATCTGTCCAGTAGATGTTGCGGTGGATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ALGVSHRYAAWD*ICPVDVAVDPV Trigger: GACTGGATCCACCGCAACATCTACTGGACAGATTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | GGGAAGAAGATGGACAGGAACCTCATACCATGTGGCTaGTCCTCATTCCCTCTGCCAGCCATGTCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GKKMDRNLIPCG*SSFPLPAMSPW Trigger: CCAGGGTGACATGGCTGGCAGAGGGAATGAGGAGCAGCCACATGGTATGAGGTTCCTGTCCATCTTCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | CCATTGTTGTCCAAACACTCGTTGGTCTTGCACTCCTaGATGGGCTCATCCGACCAGTCCTGGCAGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLLSKHSLVLHS*MGSSDQSWQSR Trigger: CCGCGACTGCCAGGACTGGTCGGATGAGCCCATCAAGGAGTGCAAGACCAACGAGTGTTTGGACAACAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | CCTGCCTCTTGGAACAGTGTCCTCCTCTTTACGCCCTaGGTGTCAGCCACAGATACGCTGCCTGGGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: PASWNSVLLFTP*VSATDTLPGTE Trigger: TTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGCGTAAAGAGGAGGACACTGTTCCAAGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | GTCTCACACCAGTTCACCCCTCTAGGCTGTGTGACCTaGTGGAACAGGACAATGTCCTCCGGGGACAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VSHQFTPLGCVT*WNRTMSSGDKR Trigger: CCTCTTGTCCCCGGAGGACATTGTCCTGTTCCACAAGGTCACACAGCCTAGAGGGGTGAACTGGTGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS CAA 90 bp | CCAGGAGTCAGGAATGCATCGGCTGACACGGCCTCCACAGCTGAATaGATTGGACTGACAGGTGACAGACATGCATGTCTCTGGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: PGVRNASADTASTAE*IGLTGDRHACLWGL Trigger: GAGTCCCCAGAGACATGCATGTCTGTCACCTGTCAGTCCAATCAATTCAGCTGTGGAGGCCGTGTCAGCCGATGCATTCCTGACTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | TCCACCAACCGGAAGCCGCTGGGACACAGGCACTCAGAGCCAATCTaGAGGTCCTTGCAGATGTGGGAACAGCCACCATTGTTGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: STNRKPLGHRHSEPI*RSLQMWEQPPLLSK Trigger: TTTGGACAACAATGGTGGCTGTTCCCACATCTGCAAGGACCTCAAGATTGGCTCTGAGTGCCTGTGTCCCAGCGGCTTCCGGTTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | CCCTGGGTGGTCAGTACAGTGTCGACTTCTCTAGGCTGTGTGACCTaGTGGAACAGGACAATGTCCTCCGGGGACAAGAGGTTTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PWVVSTVSTSLGCVT*WNRTMSSGDKRFSA Trigger: GGCTGAAAACCTCTTGTCCCCGGAGGACATTGTCCTGTTCCACAAGGTCACACAGCCTAGAGAAGTCGACACTGTACTGACCACCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213114.2 |
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| CDS TCA 72 bp | TTTTCCGTCTCTACACTGGAACTCGTTCCTGCTGCATaGGTCTTCTGCTGCAACTCCGGCAGCAGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSVSTLELVPAA*VFCCNSGSSQE Trigger: CTCCTGGCTGCTGCCGGAGTTGCAGCAGAAGACTCATGCAGCAGGAACGAGTTCCAGTGTAGAGACGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | CATCCTGGCATCGGAAGTCATCCTGGGAGCACGTCTTaGGGGGACAGCCTTGTTCGTCTGAGTCATTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: HPGIGSHPGSTS*GDSLVRLSHFH Trigger: GTGAAAATGACTCAGACGAACAAGGCTGTCCCCCCAAGACGTGCTCCCAGGATGACTTCCGATGCCAGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | CTGCCTCTTGGAACAGTGTCCTCCTCTTTACGCCCTTaGTGTCAGCCACAGATACGCTGCCTGGGACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LPLGTVSSSLRP*CQPQIRCLGLN Trigger: ATTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGCGTAAAGAGGAGGACACTGTTCCAAGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | TCGCACACCTTGTCCAAGCTGATGCACTCCCCACTGTaGCACTTGAACTTGTTGGGGCCATCACACTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SHTLSKLMHSPL*HLNLLGPSHCV Trigger: GACACAGTGTGATGGCCCCAACAAGTTCAAGTGTCACAGTGGGGAGTGCATCAGCTTGGACAAGGTGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | TCATGCCACATCGTCCTCCAGGCTGACCATCTGTCTTaGGGGGTAGGTATAGCCATCCTGGCTTCGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SCHIVLQADHLS*GVGIAILASAN Trigger: ATTTGCCGAAGCCAGGATGGCTATACCTACCCCTCAAGACAGATGGTCAGCCTGGAGGACGATGTGGCATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | TGCATTTTCCGTCTCTACACTGGAACTCGTTCCTGCTaGATGAGTCTTCTGCTGCAACTCCGGCAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CIFRLYTGTRSC*MSLLLQLRQQP Trigger: TGGCTGCTGCCGGAGTTGCAGCAGAAGACTCATGCAGCAGGAACGAGTTCCAGTGTAGAGACGGAAAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | CGATGCATTTTCCGTCTCTACACTGGAACTCGTTCCTaGTGCATGAGTCTTCTGCTGCAACTCCGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RCIFRLYTGTRS*CMSLLLQLRQQ Trigger: CTGCTGCCGGAGTTGCAGCAGAAGACTCATGCAGCAGGAACGAGTTCCAGTGTAGAGACGGAAAATGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | AGTCATGTTCACGGTCACACTGGCGGCTACCGTGAATaGAGGAGCCATCTGCACACTGGAATTCATCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SHVHGHTGGYRE*RSHLHTGIHQV Trigger: GACCTGATGAATTCCAGTGTGCAGATGGCTCCTGCATTCACGGTAGCCGCCAGTGTGACCGTGAACATGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS GCA 72 bp | TCCTCTTTACGCCCTTGGTGTCAGCCACAGATACGCTaGCTGGGACTGAATCTGTCCAGTAGATGTTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SSLRPWCQPQIR*LGLNLSSRCCG Trigger: ACCGCAACATCTACTGGACAGATTCAGTCCCAGGCAGCGTATCTGTGGCTGACACCAAGGGCGTAAAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | TCACACCAGTTCACCCCTCTAGGCTGTGTGACCTTGTaGAACAGGACAATGTCCTCCGGGGACAAGAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SHQFTPLGCVTL*NRTMSSGDKRF Trigger: AAACCTCTTGTCCCCGGAGGACATTGTCCTGTTCCACAAGGTCACACAGCCTAGAGGGGTGAACTGGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034713.9 |
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| CDS TCA 72 bp | TTGCAGTCATGTTCACGGTCACACTGGCGGCTACCGTaGATGCAGGAGCCATCTGCACACTGGAATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LQSCSRSHWRLP*MQEPSAHWNSS Trigger: TGATGAATTCCAGTGTGCAGATGGCTCCTGCATTCACGGTAGCCGCCAGTGTGACCGTGAACATGACTGCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | AGGAATGCATCGGCTGACACGGCCTCCACAGCTGAATaGATTGGACTGACAGGTGACAGACATGCATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RNASADTASTAE*IGLTGDRHACL Trigger: GAGACATGCATGTCTGTCACCTGTCAGTCCAATCAATTCAGCTGTGGAGGCCGTGTCAGCCGATGCATTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | TCGGTCACCAGTGAGTGGATGTCCACACCATTCAAACCCCCTTTCTaGATCTTGGCGGGTGTTCCCCAATCTGTCCAGTACATGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SVTSEWMSTPFKPPF*ILAGVPQSVQYMKP Trigger: TGGCTTCATGTACTGGACAGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACTGGTGACCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 90 bp | ACCAGTGAGTGGATGTCCACACCATTCAAACCCCCTTTCTTGATCTaGGCGGGTGTTCCCCAATCTGTCCAGTACATGAAGCCATGCACA | + |
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Preference number: 6 (lower is better) Translates to: TSEWMSTPFKPPFLI*AGVPQSVQYMKPCT Trigger: TGTGCATGGCTTCATGTACTGGACAGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | GTGAGTGGATGTCCACACCATTCAAACCCCCTTTCTTaGTCTTGGCGGGTGTTCCCCAATCTGTCCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: VSGCPHHSNPLS*SWRVFPNLSST Trigger: TGTACTGGACAGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | AGTGAGTGGATGTCCACACCATTCAAACCCCCTTTCTaGATCTTGGCGGGTGTTCCCCAATCTGTCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: SEWMSTPFKPPF*ILAGVPQSVQY Trigger: GTACTGGACAGATTGGGGAACACCCGCCAAGATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS TCA 72 bp | GATGCCATTTGGCCACTGGATGTTTTCGGTCACCAGTaGGTGGATGTCCACACCATTCAAACCCCCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DAIWPLDVFGHQ*VDVHTIQTPFL Trigger: AAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACTGGTGACCGAAAACATCCAGTGGCCAAATGGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | CCATTTGGCCACTGGATGTTTTCGGTCACCAGTGAGTaGATGTCCACACCATTCAAACCCCCTTTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: PFGHWMFSVTSE*MSTPFKPPFLI Trigger: GATCAAGAAAGGGGGTTTGAATGGTGTGGACATCCACTCACTGGTGACCGAAAACATCCAGTGGCCAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CCA 72 bp | CCACTGGAAAGATCTAGTGTGATGCCATTTGGCCACTaGATGTTTTCGGTCACCAGTGAGTGGATGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: PLERSSVMPFGH*MFSVTSEWMST Trigger: TGTGGACATCCACTCACTGGTGACCGAAAACATCCAGTGGCCAAATGGCATCACACTAGATCTTTCCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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| CDS CAA 72 bp | TTGAGGTCCTTGCAGATGTGGGAACAGCCACCATTGTaGTCCAAACACTCGTTGGTCTTGCACTCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LRSLQMWEQPPL*SKHSLVLHSLM Trigger: CATCAAGGAGTGCAAGACCAACGAGTGTTTGGACAACAATGGTGGCTGTTCCCACATCTGCAAGGACCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034713.9 ENSMUST00000213114.2 |
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