Pregenerated sensors for LDHD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031958Ensembl transcript IDs: ENSMUST00000070004.4
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGACCTAGAGGGGGAAAGGATGCAGCTGCAAACGGGGCTCACGTaGCCAAAGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RDLEGERMQLQTGLT*PKSRPNSAGWNGPP Trigger: GGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCTTTGGTCACGTGAGCCCCGTTTGCAGCTGCATCCTTTCCCCCTCTAGGTCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR CCA 90 bp | CATGATGCAGGGCACCAGCAGAGGAGAGGCCCCCACAGACGGATCTaGGATCTGATCTTAGCTTGGAGTAGATCCACACCACCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HDAGHQQRRGPHRRI*DLILAWSRSTPPLP Trigger: TGGCAGAGGTGGTGTGGATCTACTCCAAGCTAAGATCAGATCCCAGATCCGTCTGTGGGGGCCTCTCCTCTGCTGGTGCCCTGCATCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR TCA 90 bp | TCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGGTaGGTCATGATGCAGGGCACCAGCAGAGGAGAGGCCCCCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: SLCKERNAPVIIYTG*VMMQGTSRGEAPTD Trigger: GTCTGTGGGGGCCTCTCCTCTGCTGGTGCCCTGCATCATGACTCACCCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR TCA 90 bp | AGCTTGAAGAAGGTGCTTCAGTTTCCTGGTGGGGAAGCTGTCAGGTaGCCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SLKKVLQFPGGEAVR*PPPLAGLLPQVCKS Trigger: GCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGGTCACCTGACAGCTTCCCCACCAGGAAACTGAAGCACCTTCTTCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGTAGCAGCTTTCTGTaGGAGAGTCCAGCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RAGPTVPDGTVLPPSARKGSSFL*ESPAPS Trigger: TGAGGGAGCTGGACTCTCTCACAGAAAGCTGCTACC...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAAGGAAGACACCCCACTaGGAAACACCCTGGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RAGPTVPDGTVLPPSARKRKTPH*ETPWVF Trigger: GAAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCT...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAGGGGCTGGGCCCCACAGACGGATCTaGGATCTGATCTTAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PPPLAGLLPQVCKSRGAGPHRRI*DLILAW Trigger: CCAAGCTAAGATCAGATCCCAGATCCGTCTGTGGGG...CCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR TCA 90 bp | CACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTGCTCGATCGTTGGCATaGAGGAAAAGACCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: HTTSASQEDTPLGNTLGFARSLA*RKRPEQ Trigger: CTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGC...AAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTTGTGTTCTGGAGATTaGCAGCCAAGGGTTACACAT | + |
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Preference number: 2 (lower is better) Translates to: TVPDGTVLPPSARKGTLLLCSGD*QPRVTH Trigger: ATGTGTAACCCTTGGCTGGCAATCTCCAGAACACAA...CAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR TCA 72 bp | GAGGGGGAAAGGATGCAGCTGCAAACGGGGCTCACGTaGCCAAAGAGCCGGCCCAACAGTGCCGGATGGAAC | + |
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Preference number: 3 (lower is better) Translates to: EGERMQLQTGLT*PKSRPNSAGWN Trigger: GTTCCATCCGGCACTGTTGGGCCGGCTCTTTGGTCACGTGAGCCCCGTTTGCAGCTGCATCCTTTCCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR CAA 90 bp | CCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAGGGGCTGGGTCCCTCACCTTCATCTaGAGCCCCAGCTACAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PPPLAGLLPQVCKSRGAGSLTFI*SPSYRG Trigger: GCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGA...CCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGGAACAGGGGCGGGCTTaGTGTTCTGGAGATTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TVPDGTVLPPSARKGTLLEQGRA*CSGDCQ Trigger: CTGGCAATCTCCAGAACACAAAGCCCGCCCCTGTTC...CAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR GCA 72 bp | AAGCTGTCAGGTGACCTCCACCACTGGCAGGTCTCCTaGCTCAGGTATGCAAAAGCAGAGGGGCTGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: KLSGDLHHWQVS*LRYAKAEGLGL Trigger: CAGTCCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGGTCACCTGACAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR CCA 72 bp | GGCCCCCACAGACGGATCTGGGATCTGATCTTAGCTTaGAGTAGATCCACACCACCTCTGCCAGCCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GPHRRIWDLILA*SRSTPPLPARK Trigger: CTTCCTGGCTGGCAGAGGTGGTGTGGATCTACTCCAAGCTAAGATCAGATCCCAGATCCGTCTGTGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR CCA 72 bp | TTCCTGGTGGGGAAGCTGTCAGGTGACCTCCACCACTaGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FLVGKLSGDLHH*QVSCLRYAKAE Trigger: CTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGGTCACCTGACAGCTTCCCCACCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR TCA 72 bp | GCATCAGCCCTTCCATTTCGTGCTCGATCGTTGGCATaGAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: ASALPFRARSLA*RKRPEQGRALC Trigger: ACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGAAATGGAAGGGCTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGAGGCTTTGTGTTCTGGAGATaGCCAGCCAAGGGTTACACA | + |
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Preference number: 3 (lower is better) Translates to: SVRESSSLTFILSPSYRGFVFWR*PAKGYT Trigger: TGTGTAACCCTTGGCTGGCAATCTCCAGAACACAAA...GCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| 3UTR TCA 72 bp | AGTTCATCTGTATTTCTATTGTCCACCATAACAGCTTaGAGAAGGTGCTTCAGTTTCCTGGTGGGGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSSVFLLSTITA*RRCFSFLVGKL Trigger: CAGCTTCCCCACCAGGAAACTGAAGCACCTTCTTCAAGCTGTTATGGTGGACAATAGAAATACAGATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CCACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTCGAGGCCCCGGTGGCTaGCATGCCACACAGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PHHLCQPGRHPTGKHPGFRGPGG*HATQRS Trigger: GCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCG...AAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGCGAGCCACGGGCACTaGAGCCTGGAGGATCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKASHGH*SLEDLN Trigger: GTTCAGATCCTCCAGGCTGCAGTGCCCGTGGCTCGC...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAACTGGCAGCCGGGAGATaGGTACACACACGTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKLAAGR*VHTRPW Trigger: CCACGGACGTGTGTGTACCCATCTCCCGGCTGCCAG...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | CCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAGGGGCTGGGGAAGCAGTGGACACGTaGGGGCTCCCTACAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: PPPLAGLLPQVCKSRGAGEAVDT*GLPTTA Trigger: GGCAGTTGTAGGGAGCCCCCACGTGTCCACTGCTTC...CCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAACAGCCGCTTGAACACTaGGGAACGCACAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKQPLEH*GTHRWQ Trigger: CTGCCACCTGTGCGTTCCCCAGTGTTCAAGCGGCTG...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAACAGGCGCAGGGTGGTTaGTGTAATGATGCCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKQAQGG*CNDAQG Trigger: ACCCTGGGCATCATTACATCAACCACCCTGCGCCTG...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAACTTTGCCTGGGTTCATaGGACCACGGGGATCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKLCLGS*DHGDPV Trigger: CACTGGATCCCCGTGGTCTCATGAACCCAGGCAAAG...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGATGGCGGCCCCGGCCTaGGGTGTGAAGCAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSSLPLQGKERSCHHIYRMAAPA*GVKQPA Trigger: GGCAGGCTGCTTCACACCGCAGGCCGGGGCCGCCAT...CCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGTTCTGGAGATTGCCGCATGTCCCACCGAGTaGCAGGGCCCGCCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WHEGKDQNRGGLCVLEIAACPTE*QGPPAQ Trigger: CTGGGCAGGCGGGCCCTGGCACTCGGTGGGACATGC...GGCAATCTCCAGAACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | GCTTTCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGTGCCCGAGGCCCCGGTaGCTGCCATGCCACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: AFCERVQLPHLHLEPQLQCPRPR*LPCHTE Trigger: CTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCA...CTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | CACCAGCAGAGGAGAGGCCCCCACAGACGGATCTGGGATCTGATCTTAGCTTGGTGGGGAACGCACAGGTaGCAGCCACCGTTGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HQQRRGPHRRIWDLILAWWGTHR*QPPLLP Trigger: CGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCA...CCAAGCTAAGATCAGATCCCAGATCCGTCTGTGGGGGCCTCTCCTCTGCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | CTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTCTACCGGAGCAGCCTGGAGGATCTaGACTGTGCTGTCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LCQPGRHPTGKHPGFSTGAAWRI*TVLSTA Trigger: GGCTGTGGACAGCACAGTTCAGATCCTCCAGGCTGC...TCCGGTAGAAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGAGCGCACAGCATTGGTaGCCGAGGCCCCGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSSLPLQGKERSCHHIYRSAQHW*PRPRWL Trigger: CAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCT...CCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTGAAGAAGGTGCTTCAGTTTCCTGGTGGGGAAGCTGTCAGGTGACCTCCGCTTCCGGCGCAGGGTaGAGGCGCAGGGTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QLEEGASVSWWGSCQVTSASGAG*RRRVVD Trigger: ATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGC...GGAGGTCACCTGACAGCTTCCCCACCAGGAAACTGAAGCACCTTCTTCAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | CCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAGGGGCTGGGGTCTGCTGGGAACCGTaGAACTCCAGGAAAAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PPPLAGLLPQVCKSRGAGVCWEP*NSRKSV Trigger: CACGCTTTTCCTGGAGTTCCACGGTTCCCAGCAGAC...CCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CCACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTCATCTAGGAACTCAATaGGAGCCACGGGCACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PHHLCQPGRHPTGKHPGFHLGTQ*EPRALQ Trigger: CTGCAGTGCCCGTGGCTCGCATTGAGTTCCTAGATG...AAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTGCCATGTTCTCCAGTaGATGTCCCACCGAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVPDGTVLPPSARKGTLLCHVLQ*MSHRVP Trigger: TGGCACTCGGTGGGACATGCACTGGAGAACATGGCA...CAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | TCCATTTCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCCACCCTGCGACCCCCTaGAGCAGAAACTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SISCSIVGMKEKTRTGAGHPATP*SRNSSR Trigger: CCTGGAGGAGTTTCTGCTCCAGGGGGTCGCAGGGTG...GCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGAAATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGAGGCTCCGCCAGTGTCTGCTaGGAACCGTGGAACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVRESSSLTFILSPSYRGSASVC*EPWNSR Trigger: CCTGGAGTTCCACGGTTCCCAGCAGACACTGGCGGA...GCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | GTAGCAGCTTTCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGGGGCCCACTTCCTCTTaGAGCAGCTGTCGCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VAAFCERVQLPHLHLEPQGPTSS*SSCRLP Trigger: GGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCC...CTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGAAAGCTGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAACAGCATCAGGAGGTTaGCACCTGTGCATCGATTCA | + |
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Preference number: 4 (lower is better) Translates to: RAGPTVPDGTVLPPSARKTASGG*HLCIDS Trigger: TGAATCGATGCACAGGTGTCAACCTCCTGATGCTGT...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | CTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTCTACCGGATTTCTGCAAAGGCCTTaGCCCTCCTCTGCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCQPGRHPTGKHPGFSTGFLQRP*PSSAPL Trigger: CAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAA...TCCGGTAGAAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTGAAGAAGGTGCTTCAGTTTCCTGGTGGGGAAGCTGTCAGGTGACCTCCTGGCTGAGTCCACCCTaGGACCCCCTGGAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QLEEGASVSWWGSCQVTSWLSPP*DPLEQK Trigger: TTTCTGCTCCAGGGGGTCGCAGGGTGGACTCAGCCA...GGAGGTCACCTGACAGCTTCCCCACCAGGAAACTGAAGCACCTTCTTCAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | CACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTATAGGCCTTACTTCCTaGACTCAGGGCCAAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HTTSASQEDTPLGNTLGFIGLTS*TQGQGC Trigger: GCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGCCTAT...AAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGCGGTGTGAAGCAGCCTaGCGTCAGGCAGCACTACCT | + |
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Preference number: 4 (lower is better) Translates to: RSSLPLQGKERSCHHIYRRCEAA*RQAALP Trigger: AGGTAGTGCTGCCTGACGGCAGGCTGCTTCACACCG...CCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTCAGGAAAAGCGTGGGTaGCACGGGGCAGTTAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HTTSASQEDTPLGNTLGFQEKRG*HGAVKF Trigger: AAACTTAACTGCCCCGTGGCACCCACGCTTTTCCTG...AAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTGAAGAAGGTGCTTCAGTTTCCTGGTGGGGAAGCTGTCAGGTGACCTCCCCTCCTCTGCTCCTCTaGATCATCTGGGTCGACCAG | + |
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Preference number: 4 (lower is better) Translates to: QLEEGASVSWWGSCQVTSPPLLL*IIWVDQ Trigger: CTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAGG...GGAGGTCACCTGACAGCTTCCCCACCAGGAAACTGAAGCACCTTCTTCAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGAGAAGCATCTGCGCCTaGGTCAACAGGAAACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TVPDGTVLPPSARKGTLLRSICA*VNRKPK Trigger: CTTTGGTTTCCTGTTGACCCAGGCGCAGATGCTTCT...CAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | TCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGAGGCCCACAAAGAGTCCTGTaGGATTGTAGCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRESSSLTFILSPSYRGPQRVL*DCSQLH Trigger: GTGCAGCTGGCTACAATCTCACAGGACTCTTTGTGG...GCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | CACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTATTATCCTGAGTGATTaGCTCTGTGCGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTTSASQEDTPLGNTLGFIILSD*LCALQL Trigger: CAGCTGCAGCGCACAGAGGCAATCACTCAGGATAAT...AAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TCCATTTCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTGCCATCACCCACATaGCCAACGATGGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SISCSIVGMKEKTRTGAGLPSPT*PTMAPV Trigger: CACAGGAGCCATCGTTGGGCATGTGGGTGATGGCAA...GCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGTTCTGGAGATTGCCGGAGCAGCTGTCGCTTaGCCAGTCCGATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WHEGKDQNRGGLCVLEIAGAAVA*PVRCHV Trigger: AACATGGCATCGGACTGGGCAAGCGACAGCTGCTCC...GGCAATCTCCAGAACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TCCATTTCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCAGTGTGTTTTTGAGCTaGCGCATGGTCTCCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SISCSIVGMKEKTRTGAGSVFLS*RMVSTP Trigger: GGGCGTGGAGACCATGCGGCAGCTCAAAAACACACT...GCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGAAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | TCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGACCTGGTCCACATTCTaGGGCCAAACCACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSIVGMKEKTRTGAGFVTWSTF*GQTTAS Trigger: TGATGCTGTGGTTTGGCCTCAGAATGTGGACCAGGT...CACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGTTCTGGAGATTGCCATTGTAGCACAGGCTTaGCACTCGGCTGACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WHEGKDQNRGGLCVLEIAIVAQA*HSADLV Trigger: GACCAGGTCAGCCGAGTGGCAAGCCTGTGCTACAAT...GGCAATCTCCAGAACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGAGGCGGATGCAGTGAAAGTTaGCATCACCCACATGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRESSSLTFILSPSYRGGCSES*HHPHAQ Trigger: TTGGGCATGTGGGTGATGGCAACTTTCACTGCATCC...GCCTCTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGCCTGCCCAGATTTTCTaGAAAGGCCTTGACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSIVGMKEKTRTGAGFVPAQIF*KGLDPP Trigger: AGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAGG...CACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | TCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGTCACGTTGTCCCGCATaGTTCCATAGCGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSIVGMKEKTRTGAGFVSRCPA*FHSAQH Trigger: ATGCTGTGCGCTATGGAACCATGCGGGACAACGTGA...CACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | AAAAGGCTCCTAAGAACAAGGGTAGCAGCTTTCTGTGAGAGAGTCCAGCTCCCTGCCTTGACCCTCCTCTaGTCCTCTGCATCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLLRTRVAAFCERVQLPALTLL*SSASSG Trigger: CCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGC...AGGGAGCTGGACTCTCTCACAGAAAGCTGCTACCCTTGTTCTTAGGAGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | AAAAGGCTCCTAAGAACAAGGGTAGCAGCTTTCTGTGAGAGAGTCCAGCTCCCTGAGCCACCATTATCCTaGGTGATTGCCTCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLLRTRVAAFCERVQLPEPPLS*VIASVR Trigger: GCGCACAGAGGCAATCACTCAGGATAATGGTGGCTC...AGGGAGCTGGACTCTCTCACAGAAAGCTGCTACCCTTGTTCTTAGGAGCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TGGGTTTTCTACCGGAGTAAAAGGCTCCTAAGAACAAGGGTAGCAGCTTTCTGTGTGCCAGGGCCCGCCTaGCCAGATTTTCTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVFYRSKRLLRTRVAAFCVPGPA*PDFLQR Trigger: CCTTTGCAGAAAATCTGGGCAGGCGGGCCCTGGCAC...ACAGAAAGCTGCTACCCTTGTTCTTAGGAGCCTTTTACTCCGGTAGAAAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | AACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACACTCTACCAAGATCTCTaGCAGCCGGGAGATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NGPPSLCKERNAPVIIYTLYQDL*QPGDGY Trigger: GTACCCATCTCCCGGCTGCCAGAGATCTTGGTAGAG...TGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | TCCATTTCGTGCTCGATCGTTGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTGCAGGCATCCATCATaGCATCATCTAGGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SISCSIVGMKEKTRTGAGCRHPS*HHLGTQ Trigger: TTGAGTTCCTAGATGATGTCATGATGGATGCCTGCA...GCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCAACGATCGAGCACGAAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGGTGAGTGTGTTGCTCTCTGACTaGAGAAGCAGTGGACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLQGKERSCHHIYRVSVLLSD*RSSGHV Trigger: CACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACAC...ACTCACCCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CCA 90 bp | TGGGTTTTCTACCGGAGTAAAAGGCTCCTAAGAACAAGGGTAGCAGCTTTCTGTGCTTTTCGGCCTCCTTaGCCCAGGAGAAGTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFYRSKRLLRTRVAAFCAFRPP*PRRSES Trigger: GCTCTCACTTCTCCTGGGCCAAGGAGGCCGAAAAGC...ACAGAAAGCTGCTACCCTTGTTCTTAGGAGCCTTTTACTCCGGTAGAAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR TCA 90 bp | GGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACTGTGCCAAATGGGATaGTGGGAACACCTTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTVLPPSARKGTLLSSYILCQMG*WEHLDC Trigger: ACAATCAAGGTGTTCCCATCATCCCATTTGGCACAG...TATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR GCA 90 bp | TGGGTTTTCTACCGGAGTAAAAGGCTCCTAAGAACAAGGGTAGCAGCTTTCTGTACTCAGGGCCAAGGCTaGATACCAAGCATTGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVFYRSKRLLRTRVAAFCTQGQG*IPSIVP Trigger: CGGCACAATGCTTGGTATGCAGCCTTGGCCCTGAGT...ACAGAAAGCTGCTACCCTTGTTCTTAGGAGCCTTTTACTCCGGTAGAAAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
||
| CDS-3UTR TCA 90 bp | GGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATAGGCTCCTGTGAGTTTTaGAGCTTTAATCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVLPPSARKGTLLSSYIGSCEF*SFNLLL Trigger: AAGGAGGAGATTAAAGCTTCAAAACTCACAGGAGCC...TATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CGGGGCCCACTTCCTCTTGGAGCAGCTGTCGCTTGCCCAGTCCGATaGCATGTTCTCCAGTGCATGTCCCACCGAGTGCCAGGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPLPLGAAVACPVR*HVLQCMSHRVPGPA Trigger: GGCGGGCCCTGGCACTCGGTGGGACATGCACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
||
| CDS CCA 90 bp | GAACTGTGCTGTCCACAGCCGCTTGAACACTGGGGAACGCACAGGTaGCAGCCACCGTTGCTTCCGGCGCAGGGTGCAGGCGCAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELCCPQPLEHWGTHR*QPPLLPAQGAGAGW Trigger: CCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCAGTGTTCAAGCGGCTGTGGACAGCACAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CTGGGGAACGCACAGGTGGCAGCCACCGTTGCTTCCGGCGCAGGGTaGAGGCGCAGGGTGGTTGATGTAATGATGCCCAGGGTCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGNAQVAATVASGAG*RRRVVDVMMPRVPS Trigger: TGAGGGGACCCTGGGCATCATTACATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 90 bp | GGCAGCCACCGTTGCTTCCGGCGCAGGGTGCAGGCGCAGGGTGGTTaGTGTAATGATGCCCAGGGTCCCCTCAGAGCCCACAAAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHRCFRRRVQAQGG*CNDAQGPLRAHKES Trigger: GGACTCTTTGTGGGCTCTGAGGGGACCCTGGGCATCATTACATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | GGTGCCCGAGGCCCCGGTGGCTGCCATGCCACACAGAGAAGCATCTaGGCCTGGGTCAACAGGAAACCAAAGGCCACTGTCACGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GARGPGGCHATQRSI*AWVNRKPKATVTQV Trigger: CACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | CCCGCATGGTTCCATAGCGCACAGCATTGGTGCCCGAGGCCCCGGTaGCTGCCATGCCACACAGAGAAGCATCTGCGCCTGGGTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PAWFHSAQHWCPRPR*LPCHTEKHLRLGQQ Trigger: CTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAACCATGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | TCTCCACGCCCACGGGGCCCACTTCCTCTTGGAGCAGCTGTCGCTTaGCCAGTCCGATGCCATGTTCTCCAGTGCATGTCCCACCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRPRGPLPLGAAVA*PVRCHVLQCMSHRV Trigger: CACTCGGTGGGACATGCACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | TTGAGCTGCCGCATGGTCTCCACGCCCACGGGGCCCACTTCCTCTTaGAGCAGCTGTCGCTTGCCCAGTCCGATGCCATGTTCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCRMVSTPTGPTSS*SSCRLPSPMPCSPV Trigger: CACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGAGACCATGCGGCAGCTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CATGGTTCCATAGCGCACAGCATTGGTGCCCGAGGCCCCGGTGGCTaGCATGCCACACAGAGAAGCATCTGCGCCTGGGTCAACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGSIAHSIGARGPGG*HATQRSICAWVNRK Trigger: TTTCCTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | ACTCAATGCGAGCCACGGGCACTGCAGCCTGGAGGATCTGAACTGTaGTGTCCACAGCCGCTTGAACACTGGGGAACGCACAGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQCEPRALQPGGSEL*CPQPLEHWGTHRWQ Trigger: CTGCCACCTGTGCGTTCCCCAGTGTTCAAGCGGCTGTGGACAGCACAGTTCAGATCCTCCAGGCTGCAGTGCCCGTGGCTCGCATTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | CGAGGCCCCGGTGGCTGCCATGCCACACAGAGAAGCATCTGCGCCTaGGTCAACAGGAAACCAAAGGCCACTGTCACGCAGGTGGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGPGGCHATQRSICA*VNRKPKATVTQVGI Trigger: AATACCCACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | CCACACCACCTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTGCTGTCCACAGCCGCTaGAACACTGGGGAACGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PHHLCQPGRHPTGKHPGFAVHSR*NTGERT Trigger: TGTGCGTTCCCCAGTGTTCAAGCGGCTGTGGACAGC...AAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAGGTGGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CTCTCTGACTGCAGAAGCAGTGGACACGTGGGGGCTCCCTACAACTaGCTTCAGAGCCTCCACAAAGTCCTGGCTGAGTCCACCCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSDCRSSGHVGAPYN*LQSLHKVLAESTLR Trigger: TCGCAGGGTGGACTCAGCCAGGACTTTGTGGAGGCTCTGAAGGCAGTTGTAGGGAGCCCCCACGTGTCCACTGCTTCTGCAGTCAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | TTCCATAGCGCACAGCATTGGTGCCCGAGGCCCCGGTGGCTGCCATaGCACACAGAGAAGCATCTGCGCCTGGGTCAACAGGAAACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FHSAQHWCPRPRWLP*HTEKHLRLGQQETK Trigger: TTTGGTTTCCTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | CCTCCACCACTGGCAGGTCTCCTGCCTCAGGTATGCAAAAGCAGAGGGGCTGGGGGATCCAGTGTGTTTTaGAGCTGCCGCATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPPLAGLLPQVCKSRGAGGSSVF*SCRMVS Trigger: GGAGACCATGCGGCAGCTCAAAAACACACTGGATCC...CCCAGCCCCTCTGCTTTTGCATACCTGAGGCAGGAGACCTGCCAGTGGTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | TCCTGGACTCAGGGCCAAGGCTGCATACCAAGCATTGTGCCGCGCTaGCCAAAGTTCATTGCGCTTTTCGGCCTCCTTGGCCCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWTQGQGCIPSIVPR*PKFIALFGLLGPGE Trigger: TTCTCCTGGGCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATGCAGCCTTGGCCCTGAGTCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | GCCTTACTTCCTGGACTCAGGGCCAAGGCTGCATACCAAGCATTGTaGCGCGCTGCCCAAAGTTCATTGCGCTTTTCGGCCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLPGLRAKAAYQAL*RAAQSSLRFSASLA Trigger: GGCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATGCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | TCTGCGCCTGGGTCAACAGGAAACCAAAGGCCACTGTCACGCAGGTaGGTATTGAGAGCTTTACGGGTGACTCCAGGCTCCACCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SAPGSTGNQRPLSRR*VLRALRVTPGSTTT Trigger: CGTGGTGGTGGAGCCTGGAGTCACCCGTAAAGCTCTCAATACCCACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCCAGGCGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAACACAGCATCAGGAGGTaGACACCTGTGCATCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RAGPTVPDGTVLPPSARKHSIRR*TPVHRF Trigger: GAATCGATGCACAGGTGTCAACCTCCTGATGCTGTG...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | AGAGCCGGCCCAACAGTGCCGGATGGAACGGTCCTCCCTCCCTCTGCAAGGAAAACGGGGCAGTTAAGTTaGCTGTGTCTGTTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGPTVPDGTVLPPSARKTGQLS*LCLLQA Trigger: TGCCTGCAACAGACACAGCAAACTTAACTGCCCCGT...TTTCCTTGCAGAGGGAGGGAGGACCGTTCCATCCGGCACTGTTGGGCCGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | CGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGGGGGCCCACTTCCTCTaGGAGCAGCTGTCGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLPLQGKERSCHHIYRGAHFL*EQLSLA Trigger: GGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCC...CCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CCAAGGCTGCATACCAAGCATTGTGCCGCGCTGCCCAAAGTTCATTaGGCTTTTCGGCCTCCTTGGCCCAGGAGAAGTGAGAGCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRLHTKHCAALPKVH*AFRPPWPRRSESHH Trigger: ATGGTGGCTCTCACTTCTCCTGGGCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATGCAGCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | CTACCAAGATCTCTGGCAGCCGGGAGATGGGTACACACACGTCCGTaGAATAGGCCTTACTTCCTGGACTCAGGGCCAAGGCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: LPRSLAAGRWVHTRP*NRPYFLDSGPRLHT Trigger: GGTATGCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGCCTATTCCACGGACGTGTGTGTACCCATCTCCCGGCTGCCAGAGATCTTGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 90 bp | GAGGTTGACACCTGTGCATCGATTCATCATGCCCGTGTTGCTCTCTaGCTGCAGAAGCAGTGGACACGTGGGGGCTCCCTACAACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVDTCASIHHARVAL*LQKQWTRGGSLQLP Trigger: AGGCAGTTGTAGGGAGCCCCCACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
||
| CDS TCA 90 bp | CTCCTCTGCTCCTCTGCATCATCTGGGTCGACCAGGAGGATGCAGTaGAAGTTGCCATCACCCACATGCCCAACGATGGCTCCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLCSSASSGSTRRMQ*KLPSPTCPTMAPVS Trigger: ACTCACAGGAGCCATCGTTGGGCATGTGGGTGATGGCAACTTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
||
| CDS GCA 90 bp | CACGTCCGTGGAATAGGCCTTACTTCCTGGACTCAGGGCCAAGGCTaGATACCAAGCATTGTGCCGCGCTGCCCAAAGTTCATTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVRGIGLTSWTQGQG*IPSIVPRCPKFIAL Trigger: AAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATGCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGCCTATTCCACGGACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | CTCTGCCAGCCAGGAAGACACCCCACTGGGAAACACCCTGGGTTTTCTACCGGATTCATCATGCCCGTGTaGCTCTCTGACTGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCQPGRHPTGKHPGFSTGFIMPV*LSDCRS Trigger: GCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAA...TCCGGTAGAAAACCCAGGGTGTTTCCCAGTGGGGTGTCTTCCTGGCTGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | TTGACACCTGTGCATCGATTCATCATGCCCGTGTTGCTCTCTGACTaGAGAAGCAGTGGACACGTGGGGGCTCCCTACAACTGCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTPVHRFIMPVLLSD*RSSGHVGAPYNCLQ Trigger: CTGAAGGCAGTTGTAGGGAGCCCCCACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | CCTGCCCAGATTTTCTGCAAAGGCCTTGACCCTCCTCTGCTCCTCTaGATCATCTGGGTCGACCAGGAGGATGCAGTGAAAGTTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PAQIFCKGLDPPLLL*IIWVDQEDAVKVAI Trigger: GATGGCAACTTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | GGAACGGTCCTCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATATGGAGCAGCTGTCGCTaGCCCAGTCCGATGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVLPPSARKGTLLSSYIWSSCR*PSPMPC Trigger: ACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCA...TATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGAGGACCGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 90 bp | TGTGCCAAATGGGATGATGGGAACACCTTGATTGTAGCACAGGCTTaGCACTCGGCTGACCTGGTCCACATTCTGAGGCCAAACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CAKWDDGNTLIVAQA*HSADLVHILRPNHS Trigger: GCTGTGGTTTGGCCTCAGAATGTGGACCAGGTCAGCCGAGTGGCAAGCCTGTGCTACAATCAAGGTGTTCCCATCATCCCATTTGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 90 bp | ATTTTCTGCAAAGGCCTTGACCCTCCTCTGCTCCTCTGCATCATCTaGGTCGACCAGGAGGATGCAGTGAAAGTTGCCATCACCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: IFCKGLDPPLLLCII*VDQEDAVKVAITHM Trigger: CATGTGGGTGATGGCAACTTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | GCTTTCTGTGAGAGAGTCCAGCTCCCTCACCTTCATCTTGAGCCCCAGCTACAGAGTTTGCTGTGTCTGTaGCAGGCATCCATCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: AFCERVQLPHLHLEPQLQSLLCL*QASIMT Trigger: TGTCATGATGGATGCCTGCAACAGACACAGCAAACT...CTGTAGCTGGGGCTCAAGATGAAGGTGAGGGAGCTGGACTCTCTCACAGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | TCCCTCCCTCTGCAAGGAAAGGAACGCTCCTGTCATCATATATACAGGGTGAGTTTTTCTGCAAAGGCCTaGACCCTCCTCTGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLQGKERSCHHIYRVSFSAKA*TLLCSS Trigger: AGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAA...ACTCACCCTGTATATATGATGACAGGAGCGTTCCTTTCCTTGCAGAGGGAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS-3UTR CAA 90 bp | TGGCATGAAGGAAAAGACCAGAACAGGGGCGGGCTTTGTGTTCTGGAGATTGCCGCTTTAATCTCCTCCTaGGTCTCTACCAAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WHEGKDQNRGGLCVLEIAALISS*VSTKIS Trigger: AGAGATCTTGGTAGAGACCAAGGAGGAGATTAAAGC...GGCAATCTCCAGAACACAAAGCCCGCCCCTGTTCTGGTCTTTTCCTTCATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | GCCAGCTGCACTCTTCCTGTAATGGCGGCCCCGGCCTaGGGTGTGAAGCAGCCTGCCGTCAGGCAGCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASCTLPVMAAPA*GVKQPAVRQHY Trigger: GTAGTGCTGCCTGACGGCAGGCTGCTTCACACCGCAGGCCGGGGCCGCCATTACAGGAAGAGTGCAGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | GCTGTCGCTTGCCCAGTCCGATGCCATGTTCTCCAGTaGATGTCCCACCGAGTGCCAGGGCCCGCCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVACPVRCHVLQ*MSHRVPGPACP Trigger: TGGGCAGGCGGGCCCTGGCACTCGGTGGGACATGCACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | TGTCCACAGCCGCTTGAACACTGGGGAACGCACAGGTaGCAGCCACCGTTGCTTCCGGCGCAGGGTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPQPLEHWGTHR*QPPLLPAQGAG Trigger: GCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCAGTGTTCAAGCGGCTGTGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | CTTGAACACTGGGGAACGCACAGGTGGCAGCCACCGTaGCTTCCGGCGCAGGGTGCAGGCGCAGGGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LEHWGTHRWQPP*LPAQGAGAGWL Trigger: CAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCAGTGTTCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 72 bp | CGTTGCTTCCGGCGCAGGGTGCAGGCGCAGGGTGGTTaGTGTAATGATGCCCAGGGTCCCCTCAGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RCFRRRVQAQGG*CNDAQGPLRAH Trigger: GTGGGCTCTGAGGGGACCCTGGGCATCATTACATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | GCACAGCATTGGTGCCCGAGGCCCCGGTGGCTGCCATaGCACACAGAGAAGCATCTGCGCCTGGGTCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: AQHWCPRPRWLP*HTEKHLRLGQQ Trigger: CTGTTGACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | ATAGCGCACAGCATTGGTGCCCGAGGCCCCGGTGGCTaGCATGCCACACAGAGAAGCATCTGCGCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IAHSIGARGPGG*HATQRSICAWV Trigger: GACCCAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | CGTTGTCCCGCATGGTTCCATAGCGCACAGCATTGGTaGCCGAGGCCCCGGTGGCTGCCATGCCACACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCPAWFHSAQHW*PRPRWLPCHTE Trigger: CTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAACCATGCGGGACAACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | GCACAGGTGGCAGCCACCGTTGCTTCCGGCGCAGGGTaGAGGCGCAGGGTGGTTGATGTAATGATGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQVAATVASGAG*RRRVVDVMMPR Trigger: CCTGGGCATCATTACATCAACCACCCTGCGCCTGCACCCTGCGCCGGAAGCAACGGTGGCTGCCACCTGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | CGCTGCAGCTGTTCCGCCAGTGTCTGCTGGGAACCGTaGAACTCCAGGAAAAGCGTGGGTGCCACGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSCSASVCWEP*NSRKSVGATGQ Trigger: CTGCCCCGTGGCACCCACGCTTTTCCTGGAGTTCCACGGTTCCCAGCAGACACTGGCGGAACAGCTGCAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | CGCATGGTCTCCACGCCCACGGGGCCCACTTCCTCTTaGAGCAGCTGTCGCTTGCCCAGTCCGATGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RMVSTPTGPTSS*SSCRLPSPMPC Trigger: ACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGAGACCATGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | TTCCATAGCGCACAGCATTGGTGCCCGAGGCCCCGGTaGCTGCCATGCCACACAGAGAAGCATCTGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FHSAQHWCPRPR*LPCHTEKHLRL Trigger: CAGGCGCAGATGCTTCTCTGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | TCACGTTGTCCCGCATGGTTCCATAGCGCACAGCATTaGTGCCCGAGGCCCCGGTGGCTGCCATGCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: SRCPAWFHSAQH*CPRPRWLPCHT Trigger: TGTGTGGCATGGCAGCCACCGGGGCCTCGGGCACCAATGCTGTGCGCTATGGAACCATGCGGGACAACGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | GTCTCCACGCCCACGGGGCCCACTTCCTCTTGGAGCAGCTGTCGCTaGCCCAGTCCGATGCCATGTTCTCCAGTGCATGTCCCACCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSTPTGPTSSWSSCR*PSPMPCSPVHVPPS Trigger: ACTCGGTGGGACATGCACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | TTTGAGCTGCCGCATGGTCTCCACGCCCACGGGGCCCACTTCCTCTaGGAGCAGCTGTCGCTTGCCCAGTCCGATGCCATGTTCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FELPHGLHAHGAHFL*EQLSLAQSDAMFSS Trigger: ACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAGTGGGCCCCGTGGGCGTGGAGACCATGCGGCAGCTCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | GCCAGGGCCCGCCTGCCCAGATTTTCTGCAAAGGCCTaGACCCTCCTCTGCTCCTCTGCATCATCTGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARARLPRFSAKA*TLLCSSASSGS Trigger: CGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAGGCGGGCCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 72 bp | CCAGGGCCCGCCTGCCCAGATTTTCTGCAAAGGCCTTaGCCCTCCTCTGCTCCTCTGCATCATCTGGGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PGPACPDFLQRP*PSSAPLHHLGR Trigger: TCGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAGGCGGGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | TTCAGAGCCTCCACAAAGTCCTGGCTGAGTCCACCCTaGGACCCCCTGGAGCAGAAACTCCTCCAGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FRASTKSWLSPP*DPLEQKLLQGD Trigger: GTCTCCCTGGAGGAGTTTCTGCTCCAGGGGGTCGCAGGGTGGACTCAGCCAGGACTTTGTGGAGGCTCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | TCCGATGCCATGTTCTCCAGTGCATGTCCCACCGAGTaGCAGGGCCCGCCTGCCCAGATTTTCTGCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDAMFSSACPTE*QGPPAQIFCKG Trigger: GCCTTTGCAGAAAATCTGGGCAGGCGGGCCCTGGCACTCGGTGGGACATGCACTGGAGAACATGGCATCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | GGATCTGAACTGTGCTGTCCACAGCCGCTTGAACACTaGGGAACGCACAGGTGGCAGCCACCGTTGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSELCCPQPLEH*GTHRWQPPLLP Trigger: CGGAAGCAACGGTGGCTGCCACCTGTGCGTTCCCCAGTGTTCAAGCGGCTGTGGACAGCACAGTTCAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | TGCAGAAGCAGTGGACACGTGGGGGCTCCCTACAACTaGCTTCAGAGCCTCCACAAAGTCCTGGCTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRSSGHVGAPYN*LQSLHKVLAES Trigger: GGACTCAGCCAGGACTTTGTGGAGGCTCTGAAGGCAGTTGTAGGGAGCCCCCACGTGTCCACTGCTTCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | CAGGGCCAAGGCTGCATACCAAGCATTGTGCCGCGCTaGCCAAAGTTCATTGCGCTTTTCGGCCTCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGQGCIPSIVPR*PKFIALFGLLG Trigger: GCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATGCAGCCTTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | CTTCCTCTTGGAGCAGCTGTCGCTTGCCCAGTCCGATaGCATGTTCTCCAGTGCATGTCCCACCGAGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLGAAVACPVR*HVLQCMSHRVP Trigger: TGGCACTCGGTGGGACATGCACTGGAGAACATGGCATCGGACTGGGCAAGCGACAGCTGCTCCAAGAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | TCTCTGGCAGCCGGGAGATGGGTACACACACGTCCGTaGAATAGGCCTTACTTCCTGGACTCAGGGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLAAGRWVHTRP*NRPYFLDSGPR Trigger: CCTTGGCCCTGAGTCCAGGAAGTAAGGCCTATTCCACGGACGTGTGTGTACCCATCTCCCGGCTGCCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | CCTGGGTCAACAGGAAACCAAAGGCCACTGTCACGCAGGTGGGTATaGAGAGCTTTACGGGTGACTCCAGGCTCCACCACCACGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSTGNQRPLSRRWV*RALRVTPGSTTTEK Trigger: CTTCTCCGTGGTGGTGGAGCCTGGAGTCACCCGTAAAGCTCTCAATACCCACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | AGCATCAGGAGGTTGACACCTGTGCATCGATTCATCATGCCCGTGTaGCTCTCTGACTGCAGAAGCAGTGGACACGTGGGGGCTCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SIRRLTPVHRFIMPV*LSDCRSSGHVGAPY Trigger: GTAGGGAGCCCCCACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAACCTCCTGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | CCCCTCAACACCGGTGCCTGTGCCAAATGGGATGATGGGAACACCTaGATTGTAGCACAGGCTTGCCACTCGGCTGACCTGGTCCACATT | + |
|
Preference number: 6 (lower is better) Translates to: PLNTGACAKWDDGNT*IVAQACHSADLVHI Trigger: AATGTGGACCAGGTCAGCCGAGTGGCAAGCCTGTGCTACAATCAAGGTGTTCCCATCATCCCATTTGGCACAGGCACCGGTGTTGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | GTGCATCGATTCATCATGCCCGTGTTGCTCTCTGACTaGAGAAGCAGTGGACACGTGGGGGCTCCCTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: VHRFIMPVLLSD*RSSGHVGAPYN Trigger: GTTGTAGGGAGCCCCCACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | CATACCAAGCATTGTGCCGCGCTGCCCAAAGTTCATTaGGCTTTTCGGCCTCCTTGGCCCAGGAGAAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HTKHCAALPKVH*AFRPPWPRRSE Trigger: CTCACTTCTCCTGGGCCAAGGAGGCCGAAAAGCGCAATGAACTTTGGGCAGCGCGGCACAATGCTTGGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | CTGCCCAGATTTTCTGCAAAGGCCTTGACCCTCCTCTaGTCCTCTGCATCATCTGGGTCGACCAGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LPRFSAKALTLL*SSASSGSTRRM Trigger: CATCCTCCTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAATCTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | GGGTCAACAGGAAACCAAAGGCCACTGTCACGCAGGTaGGTATTGAGAGCTTTACGGGTGACTCCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSTGNQRPLSRR*VLRALRVTPGS Trigger: GGAGCCTGGAGTCACCCGTAAAGCTCTCAATACCCACCTGCGTGACAGTGGCCTTTGGTTTCCTGTTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 72 bp | TCCTCTGCATCATCTGGGTCGACCAGGAGGATGCAGTaGAAGTTGCCATCACCCACATGCCCAACGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSASSGSTRRMQ*KLPSPTCPTMA Trigger: AGCCATCGTTGGGCATGTGGGTGATGGCAACTTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | TGGGATGATGGGAACACCTTGATTGTAGCACAGGCTTaGCACTCGGCTGACCTGGTCCACATTCTGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WDDGNTLIVAQA*HSADLVHILRP Trigger: TGGCCTCAGAATGTGGACCAGGTCAGCCGAGTGGCAAGCCTGTGCTACAATCAAGGTGTTCCCATCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | GGGTACACACACGTCCGTGGAATAGGCCTTACTTCCTaGACTCAGGGCCAAGGCTGCATACCAAGCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GYTHVRGIGLTS*TQGQGCIPSIV Trigger: CACAATGCTTGGTATGCAGCCTTGGCCCTGAGTCCAGGAAGTAAGGCCTATTCCACGGACGTGTGTGTACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | CCTTGGTCTCTACCAAGATCTCTGGCAGCCGGGAGATaGGTACACACACGTCCGTGGAATAGGCCTTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: PWSLPRSLAAGR*VHTRPWNRPYF Trigger: GAAGTAAGGCCTATTCCACGGACGTGTGTGTACCCATCTCCCGGCTGCCAGAGATCTTGGTAGAGACCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | AGGTTGACACCTGTGCATCGATTCATCATGCCCGTGTaGCTCTCTGACTGCAGAAGCAGTGGACACGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLTPVHRFIMPV*LSDCRSSGHVG Trigger: CCCCACGTGTCCACTGCTTCTGCAGTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | GCTGACCTGGTCCACATTCTGAGGCCAAACCACAGCATCAGGAGGTaGACACCTGTGCATCGATTCATCATGCCCGTGTTGCTCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ADLVHILRPNHSIRR*TPVHRFIMPVLLSD Trigger: GTCAGAGAGCAACACGGGCATGATGAATCGATGCACAGGTGTCAACCTCCTGATGCTGTGGTTTGGCCTCAGAATGTGGACCAGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | AGCTTTAATCTCCTCCTTGGTCTCTACCAAGATCTCTaGCAGCCGGGAGATGGGTACACACACGTCCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SFNLLLGLYQDL*QPGDGYTHVRG Trigger: TCCACGGACGTGTGTGTACCCATCTCCCGGCTGCCAGAGATCTTGGTAGAGACCAAGGAGGAGATTAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS GCA 72 bp | ATTTTCTGCAAAGGCCTTGACCCTCCTCTGCTCCTCTaGATCATCTGGGTCGACCAGGAGGATGCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IFCKGLDPPLLL*IIWVDQEDAVK Trigger: TTTCACTGCATCCTCCTGGTCGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CCA 72 bp | ACCACGGAGAAGTCTTCTGTATTCAGCTCCGTGATCTaGTCCATATGGGTCAGGTTGATGCACACTCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: TTEKSSVFSSVI*SIWVRLMHTPP Trigger: GGGTGGAGTGTGCATCAACCTGACCCATATGGACCAGATCACGGAGCTGAATACAGAAGACTTCTCCGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | GTCCACATTCTGAGGCCAAACCACAGCATCAGGAGGTaGACACCTGTGCATCGATTCATCATGCCCGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VHILRPNHSIRR*TPVHRFIMPVL Trigger: CAACACGGGCATGATGAATCGATGCACAGGTGTCAACCTCCTGATGCTGTGGTTTGGCCTCAGAATGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | TCCAGGAAAAGCGTGGGTGCCACGGGGCAGTTAAGTTaGCTGTGTCTGTTGCAGGCATCCATCATGACATCA | + |
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Preference number: 6 (lower is better) Translates to: SRKSVGATGQLS*LCLLQASIMTS Trigger: TGATGTCATGATGGATGCCTGCAACAGACACAGCAAACTTAACTGCCCCGTGGCACCCACGCTTTTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | AGGAAAAGCGTGGGTGCCACGGGGCAGTTAAGTTTGCTGTGTCTGTaGCAGGCATCCATCATGACATCATCTAGGAACTCAATGCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKSVGATGQLSLLCL*QASIMTSSRNSMRA Trigger: GGCTCGCATTGAGTTCCTAGATGATGTCATGATGGATGCCTGCAACAGACACAGCAAACTTAACTGCCCCGTGGCACCCACGCTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 90 bp | TGCCCAACGATGGCTCCTGTGAGTTTTGAAGCTTTAATCTCCTCCTaGGTCTCTACCAAGATCTCTGGCAGCCGGGAGATGGGTACACAC | + |
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Preference number: 6 (lower is better) Translates to: CPTMAPVSFEALISS*VSTKISGSREMGTH Trigger: GTGTGTACCCATCTCCCGGCTGCCAGAGATCTTGGTAGAGACCAAGGAGGAGATTAAAGCTTCAAAACTCACAGGAGCCATCGTTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | GTGGGTGCCACGGGGCAGTTAAGTTTGCTGTGTCTGTaGCAGGCATCCATCATGACATCATCTAGGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: VGATGQLSLLCL*QASIMTSSRNS Trigger: TGAGTTCCTAGATGATGTCATGATGGATGCCTGCAACAGACACAGCAAACTTAACTGCCCCGTGGCACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS CAA 72 bp | ATGGCTCCTGTGAGTTTTGAAGCTTTAATCTCCTCCTaGGTCTCTACCAAGATCTCTGGCAGCCGGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: MAPVSFEALISS*VSTKISGSREM Trigger: CATCTCCCGGCTGCCAGAGATCTTGGTAGAGACCAAGGAGGAGATTAAAGCTTCAAAACTCACAGGAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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| CDS TCA 72 bp | ATCACCCACATGCCCAACGATGGCTCCTGTGAGTTTTaGAGCTTTAATCTCCTCCTTGGTCTCTACCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ITHMPNDGSCEF*SFNLLLGLYQD Trigger: ATCTTGGTAGAGACCAAGGAGGAGATTAAAGCTTCAAAACTCACAGGAGCCATCGTTGGGCATGTGGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070004.4 |
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