Pregenerated sensors for LDB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039706Ensembl transcript IDs: ENSMUST00000070748.10, ENSMUST00000199256.5, ENSMUST00000199261.2, ENSMUST00000199534.5
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTaGCAGGAGATGTGTGAGCCTCTGCTTCTTCTAATTACCGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CMDGQQVQHTREIRP*QEMCEPLLLLITVR Trigger: CCTGACGGTAATTAGAAGAAGCAGAGGCTCACACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR TCA 90 bp | GCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGTaGGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGC | + |
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Preference number: 1 (lower is better) Translates to: ASSTHEGDKTVPGDV*ASASSNYRQGQCLC Trigger: GCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR CCA 90 bp | TTTAAATTTCATCTCTTTTCTCTCCTGATAGTAGAGATTTGCGAATaGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: FKFHLFSLLIVEICE*NSTPRAYGQRNQVP Trigger: TGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGAGAAAAGAGATGAAATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGGGTGGGGCGTTTTCTaGTTTGGTCTCTTGCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HGRTASSTHEGDKTVPGDGWGVF*FGLLRG Trigger: GCCACGCAAGAGACCAAATCAGAAAACGCCCCACCC...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTACGTCGTCCATGCCGTTaGCCGCATCATACTGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVRRPCR*PHHTAC Trigger: ACACGCAGTATGATGCGGCCAACGGCATGGACGACG...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR CAA 90 bp | GATTTGGTCTCTTGCGTGGCGGGAGGTTTACTGTTCCACGGGCTGTaGTTCCCCAGGGCAGGTGAATTGTTGAAGTCTTCTTCGTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: DLVSCVAGGLLFHGL*FPRAGELLKSSSSS Trigger: GGACGACGAAGAAGACTTCAACAATTCACCTGCCCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACGCAAGAGACCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGCTTCTTCGTCGTCCATaGCGTTGGCCGCATCATACT | + |
|
Preference number: 2 (lower is better) Translates to: PSGTVSMLLVKASKERPQLLRRP*RWPHHT Trigger: AGTATGATGCGGCCAACGGCATGGACGACGAAGAAG...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTAGGGCGTTTTCTGATTTaGTCTCTTGCGTGGCGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVGRFLI*SLAWRE Trigger: CTCCCGCCACGCAAGAGACCAAATCAGAAAACGCCC...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTACACCATCACATCCTCTaGGGAGGACTGGAAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVHHHIL*GGLEVT Trigger: AGTCACTTCCAGTCCTCCTCAGAGGATGTGATGGTG...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTATCTTACTGGGAAGCCTaGGGTGGGGCGTTTTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVSYWEA*GGAFSD Trigger: ATCAGAAAACGCCCCACCCCAGGCTTCCCAGTAAGA...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: MDGQQVQHTREIRPCQEMSDLVS*VAGGLL Trigger: CAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGA...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTATCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVSDLVS*VAGGLL Trigger: CAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGA...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCATTTGGTCTCTTGCGTaGCGGGAGGTTTACTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: CVFSGILPHGNQWKLEAAIWSLA*REVYCS Trigger: GGAACAGTAAACCTCCCGCCACGCAAGAGACCAAAT...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR CAA 90 bp | CCCAGGGCAGGTGAATTGTTGAAGTCTTCTTCGTCGTCCATGCCGTaGGCCGCATCATACTGCGTGTTTTCTAATCTAGTGATTAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PRAGELLKSSSSSMP*AASYCVFSNLVISL Trigger: AAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGGCATGGACGACGAAGAAGACTTCAACAATTCACCTGCCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGGTGCCAGGAGATGTGTaGGCCTCTGCTTCTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: IKKSSVVGGWPVTEILSTVPGDV*ASASSN Trigger: ATTAGAAGAAGCAGAGGCTCACACATCTCCTGGCAC...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGCTGATAGTAGAGATTTaGGAATGGAATTCTACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GRTASSTHEGDKTVPGDVLIVEI*EWNSTP Trigger: TGGGGTAGAATTCCATTCGCAAATCTCTACTATCAG...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCTTTTCTCGGGGATCTTaGCACATGGAAACCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: CVFSGILPHGNQWKLEAAFSRGS*HMETNG Trigger: TCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAA...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTCTTCTTCGTCGTCCATaGCGTTGGCCGCATCATACT | + |
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Preference number: 2 (lower is better) Translates to: CEPLLLLITVRDSVYASCLLRRP*RWPHHT Trigger: AGTATGATGCGGCCAACGGCATGGACGACGAAGAAG...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTGGGCAGGTGAATTGTTaGAGTCTTCTTCGTCGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CEPLLLLITVRDSVYASCGQVNC*SLLRRP Trigger: TGGACGACGAAGAAGACTTCAACAATTCACCTGCCC...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATCTGATAGTAGAGATTTaGGAATGGAATTCTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: HGRTASSTHEGDKTVPGDLIVEI*EWNSTP Trigger: TGGGGTAGAATTCCATTCGCAAATCTCTACTATCAG...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGATTTGGTCTCTTGCGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTTGGCCGCATCATACTaGGTGTTTTCTAATCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: FLIWSLAWREVYCSTGCCLAASY*VFSNLV Trigger: CACTAGATTAGAAAACACGCAGTATGATGCGGCCAA...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAGAAACCAATGGAAATTaGAGGCGGCCGGGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ETTQIQEPISFSLSESHLETNGN*RRPGRG Trigger: GCCCCTCCCCGGCCGCCTCCAATTTCCATTGGTTTC...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTTTGGCCGCATCATACTaGGTGTTTTCTAATCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: CEPLLLLITVRDSVYASCLAASY*VFSNLV Trigger: CACTAGATTAGAAAACACGCAGTATGATGCGGCCAA...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAGGGCAGGTGAATTGTTaGAGTCTTCTTCGTCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ETTQIQEPISFSLSESHLGQVNC*SLLRRP Trigger: TGGACGACGAAGAAGACTTCAACAATTCACCTGCCC...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR TCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATGTTCCCCAGGGCAGGTaGATTGTTGAAGTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NGLHGLKIFGPMASLQTHVPQGR*IVEVFF Trigger: GAAGAAGACTTCAACAATTCACCTGCCCTGGGGAAC...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTCTGATAGTAGAGATTTaGGAATGGAATTCTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: CEPLLLLITVRDSVYASCLIVEI*EWNSTP Trigger: TGGGGTAGAATTCCATTCGCAAATCTCTACTATCAG...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR CCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAGGGGATCTTGCCACATaGAAACCAATGGAAATTGGA | + |
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Preference number: 2 (lower is better) Translates to: ETTQIQEPISFSLSESHLGDLAT*KPMEIG Trigger: TCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCC...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR GCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTACTGATAGTAGAGATTTaGGAATGGAATTCTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: ETTQIQEPISFSLSESHLLIVEI*EWNSTP Trigger: TGGGGTAGAATTCCATTCGCAAATCTCTACTATCAG...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR CAA 90 bp | ACCCATATATCTTTGATGATTCCTTGTTCTAGTACTTGGCCTAAATaGAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: THISLMIPCSSTWPK*KQLRFKNQLASACQ Trigger: CTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTCAATTTAGGCCAAGTACTAGAACAAGGAATCATCAAAGATATATGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGTCGTCGTCCATGCCGTaGGCCGCATCATACTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: GRTASSTHEGDKTVPGDVSSSMP*AASYCV Trigger: CACGCAGTATGATGCGGCCAACGGCATGGACGACGA...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCGGAAACCAATGGAAATaGGAGGCGGCCGGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: CVFSGILPHGNQWKLEAAGNQWK*EAAGEG Trigger: CCCCTCCCCGGCCGCCTCCAATTTCCATTGGTTTCC...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | TCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGAGGCTCATTCGAACGCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA | + |
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Preference number: 3 (lower is better) Translates to: SMLLVKASKERPQRLIRTHLPSE*ALLPPS Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...CGTTCGAATGAGCCTCTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR TCA 72 bp | ACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGTaGGCCTCTGCTTCTTCTAATTACCGTCAGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: THEGDKTVPGDV*ASASSNYRQGQ Trigger: CTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | CCGTTGGCCGCATCATACTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA | + |
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Preference number: 3 (lower is better) Translates to: PLAASYCVFSNLVISLSSHLPSE*ALLPPS Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR TCA 72 bp | TTTACTGTTCCACGGGCTGTTGTTCCCCAGGGCAGGTaGATTGTTGAAGTCTTCTTCGTCGTCCATGCCGTT | + |
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Preference number: 3 (lower is better) Translates to: FTVPRAVVPQGR*IVEVFFVVHAV Trigger: AACGGCATGGACGACGAAGAAGACTTCAACAATTCACCTGCCCTGGGGAACAACAGCCCGTGGAACAGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR GCA 72 bp | TCAGAAAGTCACCTAGCTGTGTTTTCTCGGGGATCTTaGCACATGGAAACCAATGGAAATTGGAGGCGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SESHLAVFSRGS*HMETNGNWRRP Trigger: CGGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACAGCTAGGTGACTTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR GCA 72 bp | GGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTaGCAGGAGATGTGTGAGCCTCTGCTTCTTCTAATT | + |
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Preference number: 3 (lower is better) Translates to: GQQVQHTREIRP*QEMCEPLLLLI Trigger: AATTAGAAGAAGCAGAGGCTCACACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR CCA 72 bp | CATCTCTTTTCTCTCCTGATAGTAGAGATTTGCGAATaGAATTCTACCCCACGGGCCTATGGACAGCGTAAT | + |
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Preference number: 3 (lower is better) Translates to: HLFSLLIVEICE*NSTPRAYGQRN Trigger: ATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGAGAAAAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAAGGGCAGGTGAATTGTaGAAGTCTTCTTCGTCGTCC | + |
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Preference number: 3 (lower is better) Translates to: ETTQIQEPISFSLSESHLRAGEL*KSSSSS Trigger: GGACGACGAAGAAGACTTCAACAATTCACCTGCCCT...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| 3UTR-3UTR CAA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATCCAATTAGCTTCAGCTaGTCAGAAAGTCACCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: NGLHGLKIFGPMASLQTHPISFS*SESHLA Trigger: AGCTAGGTGACTTTCTGACAAGCTGAAGCTAATTGG...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR TCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTACATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVHPSQG*GCSSGW Trigger: CCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATG...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| CDS-3UTR GCA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGCGTGCATGGCTAGTATaGTTCTGGGGACCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGRAWLV*FWGPAP Trigger: GGGAGCTGGTCCCCAGAAGCATACTAGCCATGCACG...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| CDS-3UTR GCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGGCCAGGCTCAGGCTTaGCGCCGGGGTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGRTASSTHEGDKTVPGDGQAQA*RRGLLL Trigger: AAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCC...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTAGGCCAGGCTCAGGCTTaGCGCCGGGGTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVGQAQA*RRGLLL Trigger: AAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCC...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCGCCCAGGTACCTGAGTaGCCAGGCTCAGGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVFSGILPHGNQWKLEAAAQVPE*PGSGLP Trigger: CGGCAAGCCTGAGCCTGGCCACTCAGGTACCTGGGC...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGGGGTGGGGCGTTTTCTaGTTTGGTCTCTTGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQGWGVF*FGLLRG Trigger: GCCACGCAAGAGACCAAATCAGAAAACGCCCCACCC...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR TCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGACCACCATCACATCCTaGGTGGCCAGGCTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQTTITS*VARLRL Trigger: AAGCCTGAGCCTGGCCACTCAGGATGTGATGGTGGT...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199261.2 |
||
| CDS-3UTR TCA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGVTAVE*HRSPSL Trigger: GAGGGATGGAGACCTGTGTCATTCAACAGCAGTGAC...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATCGTGCATGGCTAGTATaGTTCTGGGGACCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGRTASSTHEGDKTVPGDRAWLV*FWGPAP Trigger: GGGAGCTGGTCCCCAGAAGCATACTAGCCATGCACG...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTACGTGCATGGCTAGTATaGTTCTGGGGACCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVRAWLV*FWGPAP Trigger: GGGAGCTGGTCCCCAGAAGCATACTAGCCATGCACG...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCTTGTCGGTTGCCTTGTaGGTTCTGCTGGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVFSGILPHGNQWKLEAALSVAL*VLLAGP Trigger: TGGCCCCGCCAGCAGAACCCACAAGGCAACCGACAA...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGGGCAGTCTCGGGGACTaGGGTTGTAGGTTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMGSLGD*GCRFCV Trigger: GACACAAAACCTACAACCTCAGTCCCCGAGACTGCC...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTAATCACATCAGGTACCTaGGTGGCCAGGCTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVITSGT*VARLRL Trigger: AAGCCTGAGCCTGGCCACTCAGGTACCTGATGTGAT...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070748.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACACCTAGCCCAGGTACCTaGGTGGCCAGGCTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTPSPGT*VARLRL Trigger: AAGCCTGAGCCTGGCCACTCAGGTACCTGGGCTAGG...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | CCGTTGGCCGCATCATACTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAASYCVFSNLVISLSSHPSQG*GCSSGW Trigger: CCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATG...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQRGHCC*MTQVSI Trigger: GATGGAGACCTGTGTCATTCAACAGCAGTGACCCCT...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGCTTTTGGTTGTCGGTTaGCTTGTGGGTTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTASSTHEGDKTVPGDVLLVVG*LVGSAG Trigger: GCCAGCAGAACCCACAAGGCAACCGACAACCAAAAG...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGGCCAGGCTCAGGCTTaGCGCCGGGGTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTGQAQA*RRGLLL Trigger: AAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCC...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGCTTCTTCGTCGTCCATaGCGTTGGCCGCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: GRTASSTHEGDKTVPGDVLLRRP*RWPHHT Trigger: AGTATGATGCGGCCAACGGCATGGACGACGAAGAAG...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | CCGTTGGCCGCATCATACTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCGGCTGCAGTTCGGGATaGCTCCTAGCCCCTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAASYCVFSNLVISLSSGCSSG*LLAPEW Trigger: CCACTCAGGGGCTAGGAGCCATCCCGAACTGCAGCC...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199256.5 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCGGCAGTCTCGGGGACTaGGGTTGTAGGTTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVFSGILPHGNQWKLEAAGSLGD*GCRFCV Trigger: GACACAAAACCTACAACCTCAGTCCCCGAGACTGCC...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGGGGCAGGTGAATTGTTaGAGTCTTCTTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTASSTHEGDKTVPGDVGQVNC*SLLRRP Trigger: TGGACGACGAAGAAGACTTCAACAATTCACCTGCCC...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR TCA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGGTTCCCCAGGGCAGGTaGATTGTTGAAGTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTASSTHEGDKTVPGDVVPQGR*IVEVFF Trigger: GAAGAAGACTTCAACAATTCACCTGCCCTGGGGAAC...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR TCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HGRTASSTHEGDKTVPGDRGHCC*MTQVSI Trigger: GATGGAGACCTGTGTCATTCAACAGCAGTGACCCCT...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGCTTTTGGTTGTCGGTTaGCTTGTGGGTTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMLLVVG*LVGSAG Trigger: GCCAGCAGAACCCACAAGGCAACCGACAACCAAAAG...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTGGCCAGGCTCAGGCTTaGCGCCGGGGTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CEPLLLLITVRDSVYASCGQAQA*RRGLLL Trigger: AAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCC...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGCTTCTTCGTCGTCCATaGCGTTGGCCGCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMLLRRP*RWPHHT Trigger: AGTATGATGCGGCCAACGGCATGGACGACGAAGAAG...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACATTGTCGGTTGCCTTGTaGGTTCTGCTGGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTLSVAL*VLLAGP Trigger: TGGCCCCGCCAGCAGAACCCACAAGGCAACCGACAA...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | GAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGGGGCGTTTTCTGATTTaGTCTCTTGCGTGGCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EICEWNSTPRAYGQRNQVGRFLI*SLAWRE Trigger: CTCCCGCCACGCAAGAGACCAAATCAGAAAACGCCC...CACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGGCTGCAGTTCGGGATaGCTCCTAGCCCAGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTGCSSG*LLAQVP Trigger: AGGTACCTGGGCTAGGAGCCATCCCGAACTGCAGCC...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGTGCTTCTCCTTAAATTaGCCAGAAGGGGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGCFSLN*PEGVTA Trigger: AGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCA...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | TCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGAGGCTCATTCGAACGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLLVKASKERPQRLIRTVTAVE*HRSPSL Trigger: GAGGGATGGAGACCTGTGTCATTCAACAGCAGTGAC...CGTTCGAATGAGCCTCTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCAACATGGGCTTCCCATaGTGTGTGACCATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CVFSGILPHGNQWKLEAANMGFP*CVTMAH Trigger: GTGTGCCATGGTCACACAGCATGGGAAGCCCATGTT...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGATTCCAAGATCAGCCTaGCTTCTGTGCATACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQIPRSA*LLCIPW Trigger: CCAAGGTATGCACAGAAGGCAGGCTGATCTTGGAAT...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HGRTASSTHEGDKTVPGDSDLVS*VAGGLL Trigger: CAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGA...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGCGTCGTCCATGCCGTTaGCCGCATCATACTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTRRPCR*PHHTAC Trigger: ACACGCAGTATGATGCGGCCAACGGCATGGACGACG...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACACGTCGTCCATGCCGTTaGCCGCATCATACTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTRRPCR*PHHTAC Trigger: ACACGCAGTATGATGCGGCCAACGGCATGGACGACG...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR TCA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGGTCGCAGTCTACTGTaGTGGATGAGTTGTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: HGRTASSTHEGDKTVPGDGRSLL*WMSCDM Trigger: CATATCACAACTCATCCATCACAGTAGACTGCGACC...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| 3UTR CAA 72 bp | GTCAGAAAGTCACCTAGCTGTGTTTTCTCGGGGATCTaGCCACATGGAAACCAATGGAAATTGGAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRKSPSCVFSGI*PHGNQWKLEAA Trigger: GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACAGCTAGGTGACTTTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTGGCAGTCTCGGGGACTaGGGTTGTAGGTTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CEPLLLLITVRDSVYASCGSLGD*GCRFCV Trigger: GACACAAAACCTACAACCTCAGTCCCCGAGACTGCC...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTCCTCTGTACGAGACTaGAGTCTCTTGTTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMSSVRD*SLLFIS Trigger: TGAGATGAACAAGAGACTGCAGTCTCGTACAGAGGA...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGAACATGGGCTTCCCATaGTGTGTGACCATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTNMGFP*CVTMAH Trigger: GTGTGCCATGGTCACACAGCATGGGAAGCCCATGTT...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGTGGCTAGTATGCTTCTaGGGACCAGCTCCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTWLVCF*GPAPCT Trigger: AGTACAGGGAGCTGGTCCCCAGAAGCATACTAGCCA...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACATGGCTAGTATGCTTCTaGGGACCAGCTCCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTWLVCF*GPAPCT Trigger: AGTACAGGGAGCTGGTCCCCAGAAGCATACTAGCCA...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | CCGTTGGCCGCATCATACTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTGGCTAGTATGCTTCTaGGGACCAGCTCCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLAASYCVFSNLVISLSSWLVCF*GPAPCT Trigger: AGTACAGGGAGCTGGTCCCCAGAAGCATACTAGCCA...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | GAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGTGCTTCTCCTTAAATTaGCCAGAAGGGGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EICEWNSTPRAYGQRNQVCFSLN*PEGVTA Trigger: AGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCA...CACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTACTCCTAGCCCCTGAGTaGCCAGGCTCAGGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLLLAPE*PGSGLP Trigger: CGGCAAGCCTGAGCCTGGCCACTCAGGGGCTAGGAG...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199256.5 |
||
| CDS-3UTR GCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTTGGCCGCATCATACTaGGTGTTTTCTAATCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMLAASY*VFSNLV Trigger: CACTAGATTAGAAAACACGCAGTATGATGCGGCCAA...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGMSPIK*AERRRI Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGACAT...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGGATAGTGTATCGCTTTaGTCCGTCTTCCAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQDSVSL*SVFQTK Trigger: TTTTGTTTGGAAGACGGACCAAAGCGATACACTATC...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR TCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGGGTCGCAGTCTACTGTaGTGGATGAGTTGTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTGRSLL*WMSCDM Trigger: CATATCACAACTCATCCATCACAGTAGACTGCGACC...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGATTCCAAGATCAGCCTaGCTTCTGTGCATACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTIPRSA*LLCIPW Trigger: CCAAGGTATGCACAGAAGGCAGGCTGATCTTGGAAT...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | GAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EICEWNSTPRAYGQRNQVIDSVL*LYHVWC Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...CACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATTTGTCGGTTGCCTTGTaGGTTCTGCTGGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHLSVAL*VLLAGP Trigger: TGGCCCCGCCAGCAGAACCCACAAGGCAACCGACAA...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACATCCTCTGTACGAGACTaGAGTCTCTTGTTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTSSVRD*SLLFIS Trigger: TGAGATGAACAAGAGACTGCAGTCTCGTACAGAGGA...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGTGTCTAATGGTAAAGTaGCACGTTTTTATTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSGTVSMLLVKASKERPQCLMVK*HVFILM Trigger: CATGAGAATAAAAACGTGGCACTTTACCATTAGACA...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATCGTGCATGGCTAGTATaGTTCTGGGGACCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHRAWLV*FWGPAP Trigger: GGGAGCTGGTCCCCAGAAGCATACTAGCCATGCACG...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR CCA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: MDGQQVQHTREIRPCQEMMSPIK*AERRRI Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGACAT...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| 3UTR CAA 72 bp | GGTGAATTGTTGAAGTCTTCTTCGTCGTCCATGCCGTaGGCCGCATCATACTGCGTGTTTTCTAATCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GELLKSSSSSMP*AASYCVFSNLV Trigger: CACTAGATTAGAAAACACGCAGTATGATGCGGCCAACGGCATGGACGACGAAGAAGACTTCAACAATTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | TCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGAGGCTCATTCGAACGATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SMLLVKASKERPQRLIRTMSPIK*AERRRI Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGACAT...CGTTCGAATGAGCCTCTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGCATCAGTTCCTGCATTaGCTCCAGTATTACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: IKKSSVVGGWPVTEILSTHQFLH*LQYYTQ Trigger: TTGTGTGTAATACTGGAGCCAATGCAGGAACTGATG...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATAACATGGGCTTCCCATaGTGTGTGACCATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHNMGFP*CVTMAH Trigger: GTGTGCCATGGTCACACAGCATGGGAAGCCCATGTT...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTGATTTGGTCTCTTGCGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTGTCTAATGGTAAAGTaGCACGTTTTTATTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLIWSLAWREVYCSTGCCCLMVK*HVFILM Trigger: CATGAGAATAAAAACGTGGCACTTTACCATTAGACA...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATCTTTTGGTTGTCGGTTaGCTTGTGGGTTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHLLVVG*LVGSAG Trigger: GCCAGCAGAACCCACAAGGCAACCGACAACCAAAAG...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR CCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTCATCAGTTCCTGCATTaGCTCCAGTATTACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: CEPLLLLITVRDSVYASCHQFLH*LQYYTQ Trigger: TTGTGTGTAATACTGGAGCCAATGCAGGAACTGATG...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR TCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATGGGCAGGTGAATTGTTaGAGTCTTCTTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHGQVNC*SLLRRP Trigger: TGGACGACGAAGAAGACTTCAACAATTCACCTGCCC...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
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| CDS-3UTR GCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTATCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLSDLVS*VAGGLL Trigger: CAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGA...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTMSPIK*AERRRI Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGACAT...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR CCA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTGATAGTGTATCGCTTTaGTCCGTCTTCCAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CEPLLLLITVRDSVYASCDSVSL*SVFQTK Trigger: TTTTGTTTGGAAGACGGACCAAAGCGATACACTATC...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR CCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAATTTGGTCTCTTGCGTaGCGGGAGGTTTACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLIWSLA*REVYCS Trigger: GGAACAGTAAACCTCCCGCCACGCAAGAGACCAAAT...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
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| 3UTR CAA 72 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTaGTCAGAAAGTCACCTAGCTGTGTTTTCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFS*SESHLAVFSRG Trigger: TCCCCGAGAAAACACAGCTAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR GCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTAATTCCAAGATCAGCCTaGCTTCTGTGCATACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLIPRSA*LLCIPW Trigger: CCAAGGTATGCACAGAAGGCAGGCTGATCTTGGAAT...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACATGTCTAATGGTAAAGTaGCACGTTTTTATTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTCLMVK*HVFILM Trigger: CATGAGAATAAAAACGTGGCACTTTACCATTAGACA...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS-3UTR GCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTATTGGCCGCATCATACTaGGTGTTTTCTAATCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLLAASY*VFSNLV Trigger: CACTAGATTAGAAAACACGCAGTATGATGCGGCCAA...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
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| CDS-3UTR CCA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTACATCAGTTCCTGCATTaGCTCCAGTATTACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: ETTQIQEPISFSLSESHLHQFLH*LQYYTQ Trigger: TTGTGTGTAATACTGGAGCCAATGCAGGAACTGATG...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CCA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATGATAGTGTATCGCTTTaGTCCGTCTTCCAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NGLHGLKIFGPMASLQTHDSVSL*SVFQTK Trigger: TTTTGTTTGGAAGACGGACCAAAGCGATACACTATC...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS GCA 90 bp | GCCCCTGAGTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTaGTGCCGGCACTGTTGGTCGTGTTCCCGGCACTGCTATTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: APEWPGSGLPPGSSS*CRHCWSCSRHCYWT Trigger: CGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199256.5 |
||
| CDS GCA 90 bp | CCTGAGTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTGCTaGCGGCACTGTTGGTCGTGTTCCCGGCACTGCTATTGGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PEWPGSGLPPGSSSC*RHCWSCSRHCYWTC Trigger: GCACGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS GCA 90 bp | GTACCTGAGTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTaGTGCCGGCACTGTTGGTCGTGTTCCCGGCACTGCTATTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VPEWPGSGLPPGSSS*CRHCWSCSRHCYWT Trigger: CGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199534.5 |
||
| CDS GCA 90 bp | CATCCTGAGTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTaGTGCCGGCACTGTTGGTCGTGTTCCCGGCACTGCTATTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: HPEWPGSGLPPGSSS*CRHCWSCSRHCYWT Trigger: CGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199261.2 |
||
| CDS TCA 90 bp | GGGTCACTGCTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGGCTCCTAGCCCCTGAGTGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLNDTGLHPSQG*GCSSGWLLAPEWPG Trigger: GCCTGGCCACTCAGGGGCTAGGAGCCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199256.5 |
||
| CDS CCA 90 bp | GGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTGCTGCCGGCACTGTTaGTCGTGTTCCCGGCACTGCTATTGGACGTGCTGCTTGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSGLPPGSSSCCRHC*SCSRHCYWTCCLWS Trigger: ACTCCACAAGCAGCACGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS TCA 90 bp | GGGTCACTGCTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGGCTCCTAGCCCAGGTACCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLNDTGLHPSQG*GCSSGWLLAQVPEW Trigger: CCACTCAGGTACCTGGGCTAGGAGCCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGCCATCCCTCCCAGGGTaGAGGCTGCAGTTCGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGPSLPG*RLQFGM Trigger: CATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGG...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TCTGATTTGGTCTCTTGCGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCTGGTTGTCGGTTGCCTaGTGGGTTCTGCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDLVSCVAGGLLFHGLLFWLSVA*WVLLAG Trigger: CCCCGCCAGCAGAACCCACAAGGCAACCGACAACCA...GAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACGCAAGAGACCAAATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTCGTCGTCCATGCCGTaGGCCGCATCATACTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: MDGQQVQHTREIRPCQEMSSSMP*AASYCV Trigger: CACGCAGTATGATGCGGCCAACGGCATGGACGACGA...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | ATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGCTGTTCCACGGGCTGTaGTTCCCCAGGGCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MDGQQVQHTREIRPCQEMLFHGL*FPRAGE Trigger: TTCACCTGCCCTGGGGAACAACAGCCCGTGGAACAG...CATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCCCATCCCTCCCAGGGTaGAGGCTGCAGTTCGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CVFSGILPHGNQWKLEAAPSLPG*RLQFGM Trigger: CATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGG...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGGCATCCCACCAGAGGTaGTCACTGTCCTCTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: GRTASSTHEGDKTVPGDVASHQR*SLSSVR Trigger: TCGTACAGAGGACAGTGACAACCTCTGGTGGGATGC...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS TCA 90 bp | CAATGCTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTCCCAGGGTTGAGGCTGCAGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCFSLNWPEGVTAVE*HRSPSLPGLRLQFG Trigger: CCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTAGCATCCCACCAGAGGTaGTCACTGTCCTCTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVASHQR*SLSSVR Trigger: TCGTACAGAGGACAGTGACAACCTCTGGTGGGATGC...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACATGGTTGTCGGTTGCCTaGTGGGTTCTGCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTWLSVA*WVLLAG Trigger: CCCCGCCAGCAGAACCCACAAGGCAACCGACAACCA...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGTGGTTGTCGGTTGCCTaGTGGGTTCTGCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IKKSSVVGGWPVTEILSTWLSVA*WVLLAG Trigger: CCCCGCCAGCAGAACCCACAAGGCAACCGACAACCA...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HGRTASSTHEGDKTVPGDHLPSE*ALLPPS Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | TCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGAGGCTCATTCGAACGGGGGCGTTTTCTGATTaGGTCTCTTGCGTGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SMLLVKASKERPQRLIRTGAFSD*VSCVAG Trigger: TCCCGCCACGCAAGAGACCAAATCAGAAAACGCCCC...CGTTCGAATGAGCCTCTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTTCTCGGGGATCTTGCCACATGGAAACCAATGGAAATTGGAGGCGGCCGGGGCGTTTTCTGATTaGGTCTCTTGCGTGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CVFSGILPHGNQWKLEAAGAFSD*VSCVAG Trigger: TCCCGCCACGCAAGAGACCAAATCAGAAAACGCCCC...GGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGAAAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | GCCTATGGACAGCGTAATCAGGTGCCAGTAGCCCATCTTACTGGGAAGCCTGGGAAGGGGTCACTGCTGTaGAATGACACAGGTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AYGQRNQVPVAHLTGKPGKGSLL*NDTGLH Trigger: ATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTT...CCCAGGCTTCCCAGTAAGATGGGCTACTGGCACCTGATTACGCTGTCCATAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTTGGTTGTCGGTTGCCTaGTGGGTTCTGCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CEPLLLLITVRDSVYASCWLSVA*WVLLAG Trigger: CCCCGCCAGCAGAACCCACAAGGCAACCGACAACCA...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EICEWNSTPRAYGQRNQVHLPSE*ALLPPS Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...CACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACACTGTTCCACGGGCTGTaGTTCCCCAGGGCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTLFHGL*FPRAGE Trigger: TTCACCTGCCCTGGGGAACAACAGCCCGTGGAACAG...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | CCGTCAGGGACAGTGTCTATGCTTCTTGTGAAGGCCTCTAAGGAGAGGCCACAGGTTTTCTCCTTTTGGTaGTCGGTTGCCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSGTVSMLLVKASKERPQVFSFW*SVALWV Trigger: AACCCACAAGGCAACCGACAACCAAAAGGAGAAAAC...CTGTGGCCTCTCCTTAGAGGCCTTCACAAGAAGCATAGACACTGTCCCTGACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGGCATCCCACCAGAGGTaGTCACTGTCCTCTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: IKKSSVVGGWPVTEILSTASHQR*SLSSVR Trigger: TCGTACAGAGGACAGTGACAACCTCTGGTGGGATGC...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCTTCTGTGCATACCTaGGTAAACATGGGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EICEWNSTPRAYGQRNQVPSVHT*VNMGFP Trigger: TGGGAAGCCCATGTTTACCAAGGTATGCACAGAAGG...CACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTGACATCAGTTCCTGCATaGGCTCCAGTATTACACACA | + |
|
Preference number: 5 (lower is better) Translates to: GRTASSTHEGDKTVPGDVTSVPA*APVLHT Trigger: TGTGTGTAATACTGGAGCCAATGCAGGAACTGATGT...CACATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | CATGGACGGACAGCAAGTTCAACACACGAGGGAGATAAGACCGTGCCAGGAGATGTTTTCTCCTTTTGGTaGTCGGTTGCCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGRTASSTHEGDKTVPGDVFSFW*SVALWV Trigger: AACCCACAAGGCAACCGACAACCAAAAGGAGAAAAC...ATCTCCTGGCACGGTCTTATCTCCCTCGTGTGTTGAACTTGCTGTCCGTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TGCGAATGGAATTCTACCCCACGGGCCTATGGACAGCGTAATCAGGTGCCAGTAACATCAGTTCCTGCATaGGCTCCAGTATTACACACA | + |
|
Preference number: 5 (lower is better) Translates to: CEWNSTPRAYGQRNQVPVTSVPA*APVLHT Trigger: TGTGTGTAATACTGGAGCCAATGCAGGAACTGATGT...TACTGGCACCTGATTACGCTGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAAGGGCAGGTGAATTGTaGAAGTCTTCTTCGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTRAGEL*KSSSSS Trigger: GGACGACGAAGAAGACTTCAACAATTCACCTGCCCT...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGATGCTTCTCCTTAAATaGGCCAGAAGGGGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IKKSSVVGGWPVTEILSTMLLLK*ARRGHC Trigger: GCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCAT...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS CCA 90 bp | TCGGTACTCTGGCTGTACCATGTATGGTGTATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATAGAAGGGGTCATGTGGTGTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVLWLYHVWCMSPIK*AERRRIEGVMWCAG Trigger: TCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATACACCATACATGGTACAGCCAGAGTACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CCA 90 bp | GGGACTGAGGTTGTAGGTTTTGTGTCTCGACATCAGTTCCTGCATTaGCTCCAGTATTACACACAACCTGAGGTAGTTGAGGGTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTEVVGFVSRHQFLH*LQYYTQPEVVEGEV Trigger: AACTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGCAGGAACTGATGTCGAGACACAAAACCTACAACCTCAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAGTTTTCTCCTTTTGGTaGTCGGTTGCCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTVFSFW*SVALWV Trigger: AACCCACAAGGCAACCGACAACCAAAAGGAGAAAAC...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | ATTAAAAAGTCATCTGTAGTTGGGGGTTGGCCCGTTACTGAGATCCTGAGCACGGTTTTCTCCTTTTGGTaGTCGGTTGCCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKKSSVVGGWPVTEILSTVFSFW*SVALWV Trigger: AACCCACAAGGCAACCGACAACCAAAAGGAGAAAAC...CGTGCTCAGGATCTCAGTAACGGGCCAACCCCCAACTACAGATGACTTTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | GAAACAACTCAGATTCAAGAACCAATTAGCTTCAGCTTGTCAGAAAGTCACCTATCGTCGTCCATGCCGTaGGCCGCATCATACTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ETTQIQEPISFSLSESHLSSSMP*AASYCV Trigger: CACGCAGTATGATGCGGCCAACGGCATGGACGACGA...TAGGTGACTTTCTGACAAGCTGAAGCTAATTGGTTCTTGAATCTGAGTTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070748.10 ENSMUST00000199261.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCCTCTGCTTCTTCTAATTACCGTCAGGGACAGTGTCTATGCTTCTTGTATGCTTCTCCTTAAATaGGCCAGAAGGGGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CEPLLLLITVRDSVYASCMLLLK*ARRGHC Trigger: GCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCAT...ACAAGAAGCATAGACACTGTCCCTGACGGTAATTAGAAGAAGCAGAGGCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGATAGTAGAGATTTGCGAATGGAATTCTACCCCACGGGCCTATGGACAACATCAGTTCCTGCATaGGCTCCAGTATTACACACA | + |
|
Preference number: 5 (lower is better) Translates to: SPDSRDLRMEFYPTGLWTTSVPA*APVLHT Trigger: TGTGTGTAATACTGGAGCCAATGCAGGAACTGATGT...TGTCCATAGGCCCGTGGGGTAGAATTCCATTCGCAAATCTCTACTATCAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS-3UTR CAA 90 bp | AATGGATTACATGGCTTGAAAATATTCGGACCCATGGCAAGTTTACAAACGCATGCATCCCACCAGAGGTaGTCACTGTCCTCTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: NGLHGLKIFGPMASLQTHASHQR*SLSSVR Trigger: TCGTACAGAGGACAGTGACAACCTCTGGTGGGATGC...ATGCGTTTGTAAACTTGCCATGGGTCCGAATATTTTCAAGCCATGTAATCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CCA 90 bp | TGTACGAGACTGCAGTCTCTTGTTCATCTCATAGATTCGGTACTCTaGCTGTACCATGTATGGTGTATGTCTCCTATAAAATGGGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTRLQSLVHLIDSVL*LYHVWCMSPIKWAE Trigger: TTCGGCCCATTTTATAGGAGACATACACCATACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS GCA 90 bp | AGTATGCTTCTGGGGACCAGCTCCCTGTACTGTCTAATGGTAAAGTaGCACGTTTTTATTCTCATGAGGTCATCAAATGTGAATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMLLGTSSLYCLMVK*HVFILMRSSNVNSK Trigger: CTTGGAATTCACATTTGATGACCTCATGAGAATAAAAACGTGGCACTTTACCATTAGACAGTACAGGGAGCTGGTCCCCAGAAGCATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS GCA 72 bp | TGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTaGTGCCGGCACTGTTGGTCGTGTTCCCGGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: WPGSGLPPGSSS*CRHCWSCSRHC Trigger: GCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CAA 72 bp | GTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTaGCTGCCGGCACTGTTGGTCGTGTTCCCGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VARLRLAAGVFF*LPALLVVFPAL Trigger: CAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS GCA 72 bp | CCAGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTGCTaGCGGCACTGTTGGTCGTGTTCCCGGCACTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: PGSGLPPGSSSC*RHCWSCSRHCY Trigger: ATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CAA 90 bp | AGGCTCAGGCTTGCCGCCGGGGTCTTCTTCTTGCTGCCGGCACTGTaGGTCGTGTTCCCGGCACTGCTATTGGACGTGCTGCTTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRLAAGVFFLLPAL*VVFPALLLDVLLVE Trigger: CTCCACAAGCAGCACGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CCA 72 bp | TTGCCGCCGGGGTCTTCTTCTTGCTGCCGGCACTGTTaGTCGTGTTCCCGGCACTGCTATTGGACGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPGSSSCCRHC*SCSRHCYWTCC Trigger: GCAGCACGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CAA 72 bp | CTTGCCGCCGGGGTCTTCTTCTTGCTGCCGGCACTGTaGGTCGTGTTCCCGGCACTGCTATTGGACGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAAGVFFLLPAL*VVFPALLLDVL Trigger: CAGCACGTCCAATAGCAGTGCCGGGAACACGACCAACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
||
| CDS CAA 72 bp | CTACCACCATCACATCCTGAGTGGCCAGGCTCAGGCTaGCCGCCGGGGTCTTCTTCTTGCTGCCGGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPPSHPEWPGSG*PPGSSSCCRHC Trigger: ACAGTGCCGGCAGCAAGAAGAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGGATGTGATGGTGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199261.2 |
||
| CDS TCA 72 bp | AGAGTTGGCTCTCCTACCACCATCACATCAGGTACCTaGGTGGCCAGGCTCAGGCTTGCCGCCGGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVGSPTTITSGT*VARLRLAAGVF Trigger: GAAGACCCCGGCGGCAAGCCTGAGCCTGGCCACTCAGGTACCTGATGTGATGGTGGTAGGAGAGCCAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070748.10 |
||
| CDS TCA 72 bp | CTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGGCTCCTAGCCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLNDTGLHPSQG*GCSSGWLLAPE Trigger: CTCAGGGGCTAGGAGCCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199256.5 |
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| CDS TCA 72 bp | CTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATGGCTCCTAGCCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLNDTGLHPSQG*GCSSGWLLAQV Trigger: TACCTGGGCTAGGAGCCATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199534.5 |
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| CDS CCA 72 bp | ACAGCTGATCCAGGACCTGAGGATCTTGTGCGTGCATaGCTAGTATGCTTCTGGGGACCAGCTCCCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: TADPGPEDLVRA*LVCFWGPAPCT Trigger: AGTACAGGGAGCTGGTCCCCAGAAGCATACTAGCCATGCACGCACAAGATCCTCAGGTCCTGGATCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS TCA 72 bp | TCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTCCCAGGGTTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLNWPEGVTAVE*HRSPSLPGLRL Trigger: CAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| CDS TCA 72 bp | CTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATCCCTCCCAGGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLKLARRGHCC*MTQVSIPPRVE Trigger: CTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199256.5 ENSMUST00000199534.5 |
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| CDS GCA 72 bp | CTGGGGACCAGCTCCCTGTACTGTCTAATGGTAAAGTaGCACGTTTTTATTCTCATGAGGTCATCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LGTSSLYCLMVK*HVFILMRSSNV Trigger: CACATTTGATGACCTCATGAGAATAAAAACGTGGCACTTTACCATTAGACAGTACAGGGAGCTGGTCCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS CCA 72 bp | TGGCTGTACCATGTATGGTGTATGTCTCCTATAAAATaGGCCGAAAGGAGAAGAATAGAAGGGGTCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: WLYHVWCMSPIK*AERRRIEGVMW Trigger: CCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATACACCATACATGGTACAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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| CDS CCA 72 bp | GTTGTAGGTTTTGTGTCTCGACATCAGTTCCTGCATTaGCTCCAGTATTACACACAACCTGAGGTAGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VVGFVSRHQFLH*LQYYTQPEVVE Trigger: CTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGCAGGAACTGATGTCGAGACACAAAACCTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070748.10 ENSMUST00000199256.5 ENSMUST00000199261.2 ENSMUST00000199534.5 |
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