Pregenerated sensors for LDAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037669Ensembl transcript IDs: ENSMUST00000037383.13, ENSMUST00000169104.3, ENSMUST00000217872.2, ENSMUST00000217999.2, ENSMUST00000218086.2, ENSMUST00000218305.2, ENSMUST00000218883.2, ENSMUST00000219043.2, ENSMUST00000219058.2, ENSMUST00000219357.2, ENSMUST00000219532.2, ENSMUST00000220274.2, ENSMUST00000220345.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCCACCCGAGAGTATTTTGCCTCCTTTAAGCCATGTGGTAGCCTaGCCTAGGGCAGAGGCAGTACCCTTGCCCTGCCATGGCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PPPESILPPLSHVVA*PRAEAVPLPCHGCQ Trigger: CTGGCAGCCATGGCAGGGCAAGGGTACTGCCTCTGCCCTAGGCCAGGCTACCACATGGCTTAAAGGAGGCAAAATACTCTCGGGTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR GCA 90 bp | GTAGCCTGGCCTAGGGCAGAGGCAGTACCCTTGCCCTGCCATGGCTaGCAGCCTTCTCCCAAAGGTTGCCACCACTGTGTTCTCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: VAWPRAEAVPLPCHG*QPSPKGCHHCVLSK Trigger: CTTAGAGAGAACACAGTGGTGGCAACCTTTGGGAGAAGGCTGGCAGCCATGGCAGGGCAAGGGTACTGCCTCTGCCCTAGGCCAGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR CCA 90 bp | ACACTGCAGCCCTCCCTTCTTGCTCTAGAGGAGCCAGCAGGGACCTaGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: TLQPSLLALEEPAGT*PFRAQEEPVGYPVA Trigger: TGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTCCTCTAGAGCAAGAAGGGAGGGCTGCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR CCA 90 bp | ATCCGTTTCAGAGCGGGGCTTGGCGGAAAGGCAGTCCTGGTGAGCTaGTCCAGGGAGCACTTTCCTATGCTCCACCAAGCAGGACCTGTG | + |
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Preference number: 1 (lower is better) Translates to: IRFRAGLGGKAVLVS*SREHFPMLHQAGPV Trigger: CACAGGTCCTGCTTGGTGGAGCATAGGAAAGTGCTCCCTGGACCAGCTCACCAGGACTGCCTTTCCGCCAAGCCCCGCTCTGAAACGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR TCA 90 bp | ACACAATCCGTTTCAGAGCGGGGCTTGGCGGAAAGGCAGTCCTGGTaGGCTGGTCCAGGGAGCACTTTCCTATGCTCCACCAAGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: TQSVSERGLAERQSW*AGPGSTFLCSTKQD Trigger: GTCCTGCTTGGTGGAGCATAGGAAAGTGCTCCCTGGACCAGCTCACCAGGACTGCCTTTCCGCCAAGCCCCGCTCTGAAACGGATTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR CCA 90 bp | GGAGCCAGCAGGGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTaGTTATCCTGTGGCAGGATGAAGTCAGGATCCTTCAGCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: GASRDLAFQGSGGAC*LSCGRMKSGSFSNS Trigger: AGAGTTGCTGAAGGATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR TCA 90 bp | CCCACCAGTGACCAAGCCTGCTCTATAAGCAAGGTACTCAGAGCCTaGAGCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: PTSDQACSISKVLRA*SLASQISSAGGILV Trigger: CACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGCTTCAGGCTCTGAGTACCTTGCTTATAGAGCAGGCTTGGTCACTGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR GCA 90 bp | GCTGGTCCAGGGAGCACTTTCCTATGCTCCACCAAGCAGGACCTGTaGATGTCAGAAGGATTTGCATGGCCATTGTGCAAATGTCGGTAC | + |
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Preference number: 1 (lower is better) Translates to: AGPGSTFLCSTKQDL*MSEGFAWPLCKCRY Trigger: GTACCGACATTTGCACAATGGCCATGCAAATCCTTCTGACATGCACAGGTCCTGCTTGGTGGAGCATAGGAAAGTGCTCCCTGGACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR CCA 90 bp | GGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTaGCAGGATGAAGTCAGGATCCTTCAGCAACTCTGTCTAGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: GPGLSGLRRSLLVIL*QDEVRILQQLCLVS Trigger: ACTAACTAGACAGAGTTGCTGAAGGATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR CCA 90 bp | GCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATCGAACTCAGGACCTCTGGAAGAGCAGTCAGTACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPCGC*ESNSGPLEEQSVLL Trigger: TAAGAGTACTGACTGCTCTTCCAGAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR GCA 90 bp | TTTCCTATGCTCCACCAAGCAGGACCTGTGCATGTCAGAAGGATTTaGATGGCCATTGTGCAAATGTCGGTACTAGGGCTGTTCCCACAA | + |
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Preference number: 1 (lower is better) Translates to: FPMLHQAGPVHVRRI*MAIVQMSVLGLFPQ Trigger: TTGTGGGAACAGCCCTAGTACCGACATTTGCACAATGGCCATGCAAATCCTTCTGACATGCACAGGTCCTGCTTGGTGGAGCATAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR CCA 90 bp | GACCATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAAAGGAAGTTCAAGCTTAATGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: DHFLAPEVGSVSKAK*LKDIRQRKFKLNVH Trigger: ATGAACATTAAGCTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 |
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| 3UTR GCA 90 bp | ACGAATGATACTGCTAGGAGAGCTTTTCTCTACAAGACAATGGAATaGTTCCAACTGTTCAAGTCATATAGACAGTTGGGTTTATTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TNDTARRAFLYKTME*FQLFKSYRQLGLLA Trigger: GGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATTCCATTGTCTTGTAGAGAAAAGCTCTCCTAGCAGTATCATTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR TCA 90 bp | GGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATTGCTCCCCCATGGAGTaGGCTGTCAGCCGGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: GPGLSGLRRSLLVILWQDCSPME*AVSRVH Trigger: GTGAACCCGGCTGACAGCTCACTCCATGGGGGAGCA...ATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGAAGTCATGCTCCCCCATGGAGTaGGCTGTCAGCCGGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AFQGSGGACWLSCGRMKSCSPME*AVSRVH Trigger: GTGAACCCGGCTGACAGCTCACTCCATGGGGGAGCA...TGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATCCTTGTGCAGACACCAGGGAGGACCTCGTGTTGTCTTCCTAGACTAAGGAGGGCCTTAGGGGTTTaGGAGGAAGGGCGTCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GILVQTPGRTSCCLPRLRRALGV*EEGRLN Trigger: GTTGAGACGCCCTTCCTCTCAAACCCCTAAGGCCCT...CCTTAGTCTAGGAAGACAACACGAGGTCCTCCCTGGTGTCTGCACAAGGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | CACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTGAGCCAGCAGGGACCTaGCCTTTCAGGGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HSSASRPGICFSTGLQGFEPAGT*PFRAQE Trigger: CTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTC...AAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | CATCATGAATGGAATGGGTGGCTCACTGCATCCTGTCCATGGAGGTCACTAGCTGAGCCAGCAGGGACCTaGCCTTTCAGGGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HHEWNGWLTASCPWRSLAEPAGT*PFRAQE Trigger: CTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTC...AGCTAGTGACCTCCATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTACTCAGAGCCTGAAGCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATGAGCCACCATGTGGTTaGTGGGAATCGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QGTQSLKPGFADQLCRRHEPPCG*WESNSG Trigger: TCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTC...ATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGCTTCAGGCTCTGAGTACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGCGAACTCAGGACCTCTaGAAGAGCAGTCAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: DLAFQGSGGACWLSCGRMRTQDL*KSSQYS Trigger: AGAGTACTGACTGCTCTTCCAGAGGTCCTGAGTTCG...CATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATTCTCGCTTCACTATCTaGACCATTTCTTGGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GPGLSGLRRSLLVILWQDSRFTI*TISWLP Trigger: CGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGA...ATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218305.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGACACCAGGGAGGACCTCGTGTTGTCTTCCTAGACTAAGGCTCCTTGTCGAGCCACCATGTGGTTaGTGGGAATCGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VQTPGRTSCCLPRLRLLVEPPCG*WESNSG Trigger: TCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTC...GACAAGGAGCCTTAGTCTAGGAAGACAACACGAGGTCCTCCCTGGTGTCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGAAGTCAACCGTTAGCATCCTTTaGTCACTGCTCCCCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: AFQGSGGACWLSCGRMKSTVSIL*SLLPHG Trigger: TCCATGGGGGAGCAGTGAGCAAAGGATGCTAACGGT...TGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGAAGTCAGGATCCCACCATGTGGTTGCTaGGAATCGAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: SGLRRSLLVILWQDEVRIPPCGC*ESNSGP Trigger: AGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGG...GATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR CCA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCGAGCCAGCAGGGACCTaGCCTTTCAGGGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSEPAGT*PFRAQE Trigger: CTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTC...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR CAA 90 bp | TCTCTAAGAACTGAAGACTCCTGTGGGCCCAGAGTGGTACTCGGGTaGAGCCCGGAAGTAGCACACAACAGCTGTTTCCATAAGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLRTEDSCGPRVVLG*SPEVAHNSCFHKLG Trigger: CCCAAGCTTATGGAAACAGCTGTTGTGTGCTACTTCCGGGCTCAACCCGAGTACCACTCTGGGCCCACAGGAGTCTTCAGTTCTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGTCTCGGCCAGGAATATaGTTTTCTACTGGACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PGFADQLCRRHPCADTRESRPGI*FSTGLQ Trigger: TTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGA...CTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGTCCAGTATGTCAGGAAGGAAGCACTCCTCCGCGTCTCGGCCAGGAATATGACTGCATCCTGTCCATaGAGGTCACTAGCTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: AVQYVRKEALLRVSARNMTASCP*RSLAES Trigger: TGATTCAGCTAGTGACCTCCATGGACAGGATGCAGT...CATATTCCTGGCCGAGACGCGGAGGAGTGCTTCCTTCCTGACATACTGGACAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR TCA 90 bp | GCACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTATCCTGTGGCAGGATaGAGTCAGGATCCTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALLRVSARNMLFYWTSRLYPVAG*SQDPSA Trigger: TGCTGAAGGATCCTGACTTCATCCTGCCACAGGATA...AAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGACACCAGGGAGGACCTCGTGTTGTCTTCCTAGACTAAGGCTCCTTGTCCAGTTAATGGCATCATaGATGGAATGGGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VQTPGRTSCCLPRLRLLVQLMAS*MEWVAH Trigger: GTGAGCCACCCATTCCATTCATGATGCCATTAACTG...GACAAGGAGCCTTAGTCTAGGAAGACAACACGAGGTCCTCCCTGGTGTCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGTGGCTTTCAGAACTCTaGACAGTCACAAAATCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PGFADQLCRRHPCADTREWLSEL*TVTKSF Trigger: AAAGGATTTTGTGACTGTTCAGAGTTCTGAAAGCCA...CTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCGAACTCAGGACCTCGCCATCTCTCCAGCCTaGGCCAGTACCTATTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LQMVVSHHVVAGNRTQDLAISPA*ASTYFL Trigger: CAGAAAATAGGTACTGGCCCAGGCTGGAGAGATGGC...GAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LAPEVGSVSKAKWLKDIRGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...ACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: APEVGSVSKAKWLKDIRQGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...TTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
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| 3UTR CAA 90 bp | CTTTCCTATGCTCCACCAAGCAGGACCTGTGCATGTCAGAAGGATTaGCATGGCCATTGTGCAAATGTCGGTACTAGGGCTGTTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LSYAPPSRTCACQKD*HGHCANVGTRAVPT Trigger: TGTGGGAACAGCCCTAGTACCGACATTTGCACAATGGCCATGCAAATCCTTCTGACATGCACAGGTCCTGCTTGGTGGAGCATAGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATCCTTGTGCAGACACCAGGGAGGACCTCGTGTTGTCTTCCTAGACTAAGGCTTGTTCTTATGCATTaGTTCCCACCAGTGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: GILVQTPGRTSCCLPRLRLVLMH*FPPVTK Trigger: CTTGGTCACTGGTGGGAATCAATGCATAAGAACAAG...CCTTAGTCTAGGAAGACAACACGAGGTCCTCCCTGGTGTCTGCACAAGGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGAAGGAGAAACTCCTTTATaGTGTCATCATCTCGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGLSGLRRSLLVILWQDEGETPL*CHHLAS Trigger: TGAAGCGAGATGATGACATCATAAAGGAGTTTCTCC...TTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218305.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGGGAATCGAACTCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCACACCGTTAGCATCCTTTaGTCACTGCTCCCCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLGIELRTSGRAVSTLNHTVSIL*SLLPHG Trigger: TCCATGGGGGAGCAGTGAGCAAAGGATGCTAACGGT...GTGGTTAAGAGTACTGACTGCTCTTCCAGAGGTCCTGAGTTCGATTCCCAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAGGATTACCGTTAGCATCCTTTaGTCACTGCTCCCCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: LTLRRGTGMRNQGLLSRITVSIL*SLLPHG Trigger: TCCATGGGGGAGCAGTGAGCAAAGGATGCTAACGGT...AATCCTGCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTCAAGTTAAACAGGCAGAACTAACACAATCCGTTTCAGAGCGGGGCTTGTTGCCCTGCCATGGCTaGCAGCCTTCTCCCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RFQVKQAELTQSVSERGLLPCHG*QPSPKG Trigger: ACCTTTGGGAGAAGGCTGGCAGCCATGGCAGGGCAA...CAAGCCCCGCTCTGAAACGGATTGTGTTAGTTCTGCCTGTTTAACTTGAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGGACCTCAGTCATATAGACAGTTaGGTTTATTGGCCTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FADQLCRRHPCADTREDLSHIDS*VYWPLR Trigger: TCTCAGAGGCCAATAAACCCAACTGTCTATATGACT...GAGGTCCTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: HFLAPEVGSVSKAKWLKDGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...ATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCGGAGATAAAAACAAGCCTATCTGTTTCCAGGATGATCACGACCTTCTGGTTTCAGAGCGGGGCTTaGCGGAAAGGCAGTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MAEIKTSLSVSRMITTFWFQSGA*RKGSPG Trigger: ACCAGGACTGCCTTTCCGCCAAGCCCCGCTCTGAAA...CCAGAAGGTCGTGATCATCCTGGAAACAGATAGGCTTGTTTTTATCTCCGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAGGATTCATGAATGGAATGGGTaGCTCACTGCATCCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LTLRRGTGMRNQGLLSRIHEWNG*LTASCP Trigger: TGGACAGGATGCAGTGAGCCACCCATTCCATTCATG...AATCCTGCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGAACTAACACAATCCGTTTCAGAGCGGGGCTTGGCGGAAAGGCAGTCCTGGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GRTNTIRFRAGLGGKAVLVSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTAAC...CAGGACTGCCTTTCCGCCAAGCCCCGCTCTGAAACGGATTGTGTTAGTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGGTCAAATCAACATGGCGGAGATAAAAACAAGCCTATCTGTTTCCAGGATACACACCTCTGGCTGTaGCAGGCTAAGCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PRSNQHGGDKNKPICFQDTHLWL*QAKQRV Trigger: CACCCTCTGCTTAGCCTGCCACAGCCAGAGGTGTGT...ATCCTGGAAACAGATAGGCTTGTTTTTATCTCCGCCATGTTGATTTGACCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR-3UTR TCA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCTATCCTGTGGCAGGATaGAGTCAGGATCCTTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSYPVAG*SQDPSA Trigger: TGCTGAAGGATCCTGACTTCATCCTGCCACAGGATA...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAGGATTCTGTTGGTTATCCTGTaGCAGGATGAAGTCAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LTLRRGTGMRNQGLLSRILLVIL*QDEVRI Trigger: GATCCTGACTTCATCCTGCCACAGGATAACCAACAG...AATCCTGCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCCATGAATGGAATGGGTaGCTCACTGCATCCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSHEWNG*LTASCP Trigger: TGGACAGGATGCAGTGAGCCACCCATTCCATTCATG...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR CAA 90 bp | CTCCTTTATGATGTCATCATCTCGCTTCACTATCTGGACCATTTCTaGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLYDVIISLHYLDHF*APEVGSVSKAKWLK Trigger: CTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGATGATGACATCATAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTCGGGAATCTCGGCCAGGAATATaGTTTTCTACTGGACTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SASRPGICFSTGLQGFRESRPGI*FSTGLQ Trigger: TTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGA...TTCCCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAACACCTTTCCAAAGATGATGTCCTAGGAAATTTTCAGAAGGGAAGAGTCCTCACTGCTCCCCCATaGAGTGAGCTGTCAGCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: LKHLSKDDVLGNFQKGRVLTAPP*SELSAG Trigger: CCCGGCTGACAGCTCACTCCATGGGGGAGCAGTGAG...GACTCTTCCCTTCTGAAAATTTCCTAGGACATCATCTTTGGAAAGGTGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTAATATGCTTTTCTACTaGACTTCAAGGCTTTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALLRVSARNMLFYWTSRLNMLFY*TSRLSG Trigger: TCCCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATT...AAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR GCA 90 bp | GACACTCTGTGTGAAGTCAGGAGGTATAAGACAGGAGGTATAGCTATCATTTTAGGGAGCACTTTCCTATaGTCCACCAAGCAGGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: DTLCEVRRYKTGGIAIILGSTFL*STKQDL Trigger: CAGGTCCTGCTTGGTGGAGCATAGGAAAGTGCTCCC...TAAAATGATAGCTATACCTCCTGTCTTATACCTCCTGACTTCACACAGAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCATGAATGGAATGGGTGGCTCACTGCATCCTGTCCATGGAGGTCACTAGCTGGCCAACTTGATGTTTaGTTTATTGCAGGTGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: HHEWNGWLTASCPWRSLAGQLDV*FIAGES Trigger: TGATTCACCTGCAATAAACCAAACATCAAGTTGGCC...AGCTAGTGACCTCCATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCGAACTCAGGACCTCGAGAACAAAAGCATGTaGTATTCCTTTCTCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQMVVSHHVVAGNRTQDLENKSM*YSFLTE Trigger: CTCTGTGAGAAAGGAATACCACATGCTTTTGTTCTC...GAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCCACTCAGCAACTATGGTAGCCATCTCCTGGCTAAAATCGAGAACAAAACCACCATGTGGTTGCTaGGAATCGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: FIHSATMVAISWLKSRTKPPCGC*ESNSGP Trigger: AGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGG...TTTTGTTCTCGATTTTAGCCAGGAGATGGCTACCATAGTTGCTGAGTGGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGCTTCCAACTGTTCAAGTCATATAGACAGTTGGGTTTATTGGCCTCTGAGACGTGCAAATCTGATGTaGACACTGCAGCCCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NASNCSSHIDSWVYWPLRRANLM*TLQPSL Trigger: AAGGGAGGGCTGCAGTGTCCACATCAGATTTGCACG...TCTCAGAGGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCCACTCAGCAACTATGGTAGCCATCTCCTGGCTAAAATCGAGAACAAAAGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: FIHSATMVAISWLKSRTKGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...TTTTGTTCTCGATTTTAGCCAGGAGATGGCTACCATAGTTGCTGAGTGGATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAATATGCTTTTCTACTaGACTTCAAGGCTTTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSNMLFY*TSRLSG Trigger: TCCCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATT...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR GCA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAGAGACATCCACAAATaGTATTCCTTTGTTCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSRDIHK*YSFVPI Trigger: TATTGGAACAAAGGAATAGCATTTGTGGATGTCTCT...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGTTAAAACACCTTTCCAAAGATGATGTCCTAGGAAATTTTCAGAAGGGACCACCATGTGGTTGCTaGGAATCGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: NKLKHLSKDDVLGNFQKGPPCGC*ESNSGP Trigger: AGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGG...TCCCTTCTGAAAATTTCCTAGGACATCATCTTTGGAAAGGTGTTTTAACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGTTAAAACACCTTTCCAAAGATGATGTCCTAGGAAATTTTCAGAAGGGATCAGGAGGAGCCTGTTaGTTATCCTGTGGCAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: NKLKHLSKDDVLGNFQKGSGGAC*LSCGRM Trigger: CATCCTGCCACAGGATAACCAACAGGCTCCTCCTGA...TCCCTTCTGAAAATTTCCTAGGACATCATCTTTGGAAAGGTGTTTTAACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTTGGATTATGAAAGAGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: RKFKLNVHLSHELLDYERGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...TCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
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| 3UTR CAA 90 bp | TACAAGACAATGGAATGCTTCCAACTGTTCAAGTCATATAGACAGTaGGGTTTATTGGCCTCTGAGATCTTAGGACTGAGTCAATTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YKTMECFQLFKSYRQ*GLLASEILGLSQLR Trigger: CCTTAATTGACTCAGTCCTAAGATCTCAGAGGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATTCCATTGTCTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
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| 3UTR-3UTR CCA 90 bp | ATTATTTATCCACTCAGCAACTATGGTAGCCATCTCCTGGCTAAAATCGAGAACGAGAACAAAAGCATGTaGTATTCCTTTCTCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: IIYPLSNYGSHLLAKIENENKSM*YSFLTE Trigger: CTCTGTGAGAAAGGAATACCACATGCTTTTGTTCTC...GTTCTCGATTTTAGCCAGGAGATGGCTACCATAGTTGCTGAGTGGATAAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 ENSMUST00000219532.2 |
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| 3UTR CAA 90 bp | CGTCAAAGGAAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTaGGATTATGAAAGATTTTATGACTTCAGGACACGGCTTAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RQRKFKLNVHLSHEL*DYERFYDFRTRLKK Trigger: CTTTTTAAGCCGTGTCCTGAAGTCATAAAATCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTTCCTTTGACG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
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| 3UTR TCA 72 bp | GTTTCAGAGCGGGGCTTGGCGGAAAGGCAGTCCTGGTaGGCTGGTCCAGGGAGCACTTTCCTATGCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSERGLAERQSW*AGPGSTFLCST Trigger: GGTGGAGCATAGGAAAGTGCTCCCTGGACCAGCTCACCAGGACTGCCTTTCCGCCAAGCCCCGCTCTGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR GCA 72 bp | CCTAGGGCAGAGGCAGTACCCTTGCCCTGCCATGGCTaGCAGCCTTCTCCCAAAGGTTGCCACCACTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PRAEAVPLPCHG*QPSPKGCHHCV Trigger: AACACAGTGGTGGCAACCTTTGGGAGAAGGCTGGCAGCCATGGCAGGGCAAGGGTACTGCCTCTGCCCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
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| 3UTR CCA 72 bp | CCCTCCCTTCTTGCTCTAGAGGAGCCAGCAGGGACCTaGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSLLALEEPAGT*PFRAQEEPVGY Trigger: ATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCCCTGCTGGCTCCTCTAGAGCAAGAAGGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR CCA 72 bp | AGGGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTaGTTATCCTGTGGCAGGATGAAGTCAGGATCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RDLAFQGSGGAC*LSCGRMKSGSF Trigger: GAAGGATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR TCA 72 bp | CCCAAAGGTTGCCACCACTGTGTTCTCTCTAAGAACTaGAGACTCCTGTGGGCCCAGAGTGGTACTCGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PKGCHHCVLSKN*RLLWAQSGTRV Trigger: AACCCGAGTACCACTCTGGGCCCACAGGAGTCTTCAGTTCTTAGAGAGAACACAGTGGTGGCAACCTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR GCA 72 bp | AAGCACGTGGCTGAGCTTAAGTTTGAACCCGGGTTGTaGCACCGAGAAGAGGACTCTCTTCTCCCACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KHVAELKFEPGL*HREEDSLLPHS Trigger: TGAGTGTGGGAGAAGAGAGTCCTCTTCTCGGTGGCACAACCCGGGTTCAAACTTAAGCTCAGCCACGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATCGAACTCAGGACCTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ESNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
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| 3UTR CCA 72 bp | CTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTaGCAGGATGAAGTCAGGATCCTTCAGCAACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSGLRRSLLVIL*QDEVRILQQLC Trigger: ACAGAGTTGCTGAAGGATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGAAATGTCAGGCCAACTaGATGTTTGGTTTATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGFADQLCRRHPCADTREKCQAN*MFGLLQ Trigger: CTGCAATAAACCAAACATCAAGTTGGCCTGACATTT...CTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCAGGATTCTCAGGAGGAGCCTGTaGGTTATCCTGTGGCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTLRRGTGMRNQGLLSRILRRSL*VILWQD Trigger: ATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAG...AATCCTGCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCCAGTATGTCAGGAAGGAAGCACTCCTCCGCGTCTCGGCCAGGAATATGAGACAGTTGGGTTTATaGGCCTCTGAGATCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVQYVRKEALLRVSARNMRQLGL*ASEILG Trigger: TCCTAAGATCTCAGAGGCCAATAAACCCAACTGTCT...CATATTCCTGGCCGAGACGCGGAGGAGTGCTTCCTTCCTGACATACTGGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR TCA 72 bp | CAGAAGGGAAGAGTCCCAAGGCAGTTAATGGCATCATaGATGGAATGGGTGGCTCACTGCATCCTGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QKGRVPRQLMAS*MEWVAHCILSM Trigger: CATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATGCCATTAACTGCCTTGGGACTCTTCCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCACTaGGCCATCTCTCCAGCCTGGGCCAGTACCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RTSGRAVSTLNH*AISPAWASTYF Trigger: AAAATAGGTACTGGCCCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGTACTGACTGCTCTTCCAGAGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATAAAAACAAGCCTATCTGTTTCCAGGATGATCACGACCTTCTGGACAGGTGCTGTTTCCATAAGCTaGGGCCAAGGATGGTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: EIKTSLSVSRMITTFWTGAVSIS*GQGWSR Trigger: CCGTGACCATCCTTGGCCCAAGCTTATGGAAACAGC...ACCTGTCCAGAAGGTCGTGATCATCCTGGAAACAGATAGGCTTGTTTTTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR CCA 72 bp | TTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAAAGGAAGTTCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAPEVGSVSKAK*LKDIRQRKFKL Trigger: AAGCTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTCGGGAAAAGTCATATAGACAGTaGGGTTTATTGGCCTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SASRPGICFSTGLQGFREKSYRQ*GLLASE Trigger: CTCAGAGGCCAATAAACCCAACTGTCTATATGACTT...TTCCCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCGAACTCAGGACCTCTTGATGTTTGGTTTATaGCAGGTGAATCACGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LQMVVSHHVVAGNRTQDLLMFGL*QVNHAY Trigger: ATAGGCGTGATTCACCTGCAATAAACCAAACATCAA...GAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCATTTGACGTTGAGGCGAGGAACAGGAATGAGGAACCAGGGCCTTTTAAGCCTGACTTGCCAGGACTaGTTCTTATGCATTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: YHLTLRRGTGMRNQGLLSLTCQD*FLCIDS Trigger: GGAATCAATGCATAAGAACAAGTCCTGGCAAGTCAG...GCTTAAAAGGCCCTGGTTCCTCATTCCTGTTCCTCGCCTCAACGTCAAATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: APEVGSVSKAKWLKDIRQKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...TTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HFLAPEVGSVSKAKWLKDKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...ATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| 3UTR GCA 72 bp | CACAAATGCTATTCCTTTGTTCCAATAGGTCTGACTTaGCAGGACTTGTTCTTATGCATTGATTCCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: HKCYSFVPIGLT*QDLFLCIDSHQ Trigger: CTGGTGGGAATCAATGCATAAGAACAAGTCCTGGCAAGTCAGACCTATTGGAACAAAGGAATAGCATTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACTCTGTGTGAAGTCAGGAGGTATAAGACAGGAGGTATAGCTATCATTTTAGCATGTCAGAAGGATTaGCATGGCCATTGTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DTLCEVRRYKTGGIAIILACQKD*HGHCAN Trigger: ATTTGCACAATGGCCATGCAAATCCTTCTGACATGC...TAAAATGATAGCTATACCTCCTGTCTTATACCTCCTGACTTCACACAGAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR GCA 72 bp | ACTGCTAGGAGAGCTTTTCTCTACAAGACAATGGAATaGTTCCAACTGTTCAAGTCATATAGACAGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TARRAFLYKTME*FQLFKSYRQLG Trigger: ACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATTCCATTGTCTTGTAGAGAAAAGCTCTCCTAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGATAAAAACAAGCCTATCTGTTTCCAGGATGATCACGACCTTCTGGACAGGTAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EIKTSLSVSRMITTFWTGKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...ACCTGTCCAGAAGGTCGTGATCATCCTGGAAACAGATAGGCTTGTTTTTATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR CCA 72 bp | AGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTTaGATTATGAAAGATTTTATGACTTCAGGACACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSLMFICPMSF*IMKDFMTSGHG Trigger: GCCGTGTCCTGAAGTCATAAAATCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| 3UTR CAA 72 bp | CATGTGGTAGCCTGGCCTAGGGCAGAGGCAGTACCCTaGCCCTGCCATGGCTGCCAGCCTTCTCCCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVVAWPRAEAVP*PCHGCQPSPKG Trigger: ACCTTTGGGAGAAGGCTGGCAGCCATGGCAGGGCAAGGGTACTGCCTCTGCCCTAGGCCAGGCTACCACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| 3UTR CAA 72 bp | GCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTaGTGCAGACACCAGGGAGGACCTCGTGTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLRRSALQEAS*CRHQGGPRVVF Trigger: GAAGACAACACGAGGTCCTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGFADQLCRRHPCADTREGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...CTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR CAA 72 bp | CAGGGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTaGGTTATCCTGTGGCAGGATGAAGTCAGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGPGLSGLRRSL*VILWQDEVRIL Trigger: AAGGATCCTGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR CAA 72 bp | CACCAGAACCAAATCCGTCATCAGGGCCTTAGGGGTTaGAGAGGAAGGGCGTCTCAACTGCCCTTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQNQIRHQGLRG*RGRASQLPLRN Trigger: GTTCCTCAAGGGCAGTTGAGACGCCCTTCCTCTCAAACCCCTAAGGCCCTGATGACGGATTTGGTTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| 3UTR CAA 72 bp | ACTGAAGACTCCTGTGGGCCCAGAGTGGTACTCGGGTaGAGCCCGGAAGTAGCACACAACAGCTGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEDSCGPRVVLG*SPEVAHNSCFH Trigger: ATGGAAACAGCTGTTGTGTGCTACTTCCGGGCTCAACCCGAGTACCACTCTGGGCCCACAGGAGTCTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGLSGLRRSLLVILWQDHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...ATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| 3UTR CAA 72 bp | ATGAAGCACGTGGCTGAGCTTAAGTTTGAACCCGGGTaGTGCCACCGAGAAGAGGACTCTCTTCTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MKHVAELKFEPG*CHREEDSLLPH Trigger: GTGTGGGAGAAGAGAGTCCTCTTCTCGGTGGCACAACCCGGGTTCAAACTTAAGCTCAGCCACGTGCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219058.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGAGCTGTCCAGTATGTCAGGAAGGAAGCACTCCTCCGCGTCTCGGCCAAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VAELSSMSGRKHSSASRPSVQGL*KWHVEC Trigger: GCATTCTACGTGCCATTTGCAAAGGCCTTGTACACT...TGGCCGAGACGCGGAGGAGTGCTTCCTTCCTGACATACTGGACAGCTCTGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | GGCATCCTTGTGCAGACACCAGGGAGGACCTCGTGTTGTCTTCCTAGACTAAGGCAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GILVQTPGRTSCCLPRLRQGLCK*HVECGI Trigger: TATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTG...CCTTAGTCTAGGAAGACAACACGAGGTCCTCCCTGGTGTCTGCACAAGGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLRVSARNMLFYWTSRLEPSCL*ESPKTQ Trigger: CTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTC...AAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | CACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTTCTCGCTTCACTATCTaGACCATTTCTTGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSSASRPGICFSTGLQGFSRFTI*TISWLP Trigger: CGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGA...AAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037383.13 |
||
| CDS-3UTR CCA 90 bp | CATCATGAATGGAATGGGTGGCTCACTGCATCCTGTCCATGGAGGTCACTAGCTCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHEWNGWLTASCPWRSLAHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...AGCTAGTGACCTCCATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CCA 90 bp | GACCATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DHFLAPEVGSVSKAKWLKHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...CTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 |
||
| 3UTR CAA 72 bp | GATGTCATCATCTCGCTTCACTATCTGGACCATTTCTaGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DVIISLHYLDHF*APEVGSVSKAK Trigger: TTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGATGATGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGAGGGCCCACATTTTATaGTCTTGGTTTCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQRAHIL*SWFQLH Trigger: GTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCT...CTGGAGAGATGGCTCAGTGGTTAAGAGTACTGACTGCTCTTCCAGAGGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTAGGGCCCACATTTTATaGTCTTGGTTTCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAPEVGSVSKAKWLKDIRRAHIL*SWFQLH Trigger: GTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCT...ACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTTGCCGTTGGGCGACAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: EQVSKLAQKWSGKLAVGRQGLCK*HVECGI Trigger: TATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTG...TCGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGAATCGAACTCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCACCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGIELRTSGRAVSTLNHHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...GTGGTTAAGAGTACTGACTGCTCTTCCAGAGGTCCTGAGTTCGATTCCCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGAAGTCAGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFQGSGGACWLSCGRMKSVSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTAAC...TGACTTCATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037383.13 |
||
| CDS-3UTR TCA 90 bp | CATCATGAATGGAATGGGTGGCTCACTGCATCCTGTCCATGGAGGTCACTAGCTGGAGAAACTCCTTTATaGTGTCATCATCTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHEWNGWLTASCPWRSLAGETPL*CHHLAS Trigger: TGAAGCGAGATGATGACATCATAAAGGAGTTTCTCC...AGCTAGTGACCTCCATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037383.13 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAPEVGSVSKAKWLKDISVQGL*KWHVEC Trigger: GCATTCTACGTGCCATTTGCAAAGGCCTTGTACACT...GATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAAGGAAGTTCAAGCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVSKAKWLKDIRQRKFKHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...CTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGCTAGCGTGGGCGACCCTGTaGTGCTGCAAGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLYHINSRVTEELWLAWATL*CCKNLL Trigger: AAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGC...TAGCCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219043.2 |
||
| 3UTR CAA 72 bp | GCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGGAAGTTCAAGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: APEVGSVSKAKW*KDIRQRKFKLN Trigger: ATTAAGCTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CCA 90 bp | AGCATAGAGCAGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTTGCCGTTCAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SIEQVSKLAQKWSGKLAVQGLCK*HVECGI Trigger: TATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTG...AACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCTCTATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTTCTTAGCCCATTCTTGCCTTGTGTCCTTAGGAAGCATTTCTAGCCATCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQFLAHSCLVSLGSISSHHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...ATGGCTAGAAATGCTTCCTAAGGACACAAGGCAAGAATGGGCTAAGAACTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CCA 90 bp | TTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCGAACTCAGGACCTCTTAAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQMVVSHHVVAGNRTQDLLSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTTAA...GAGGTCCTGAGTTCGATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| 3UTR CAA 72 bp | GTTGATAAATGTCAGGCCAACTTGATGTTTGGTTTATaGCAGGTGAATCACGCCTATCACGGCGATGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDKCQANLMFGL*QVNHAYHGDGL Trigger: GAGACCATCGCCGTGATAGGCGTGATTCACCTGCAATAAACCAAACATCAAGTTGGCCTGACATTTATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CCA 90 bp | AATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTTGTGTCGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSNFSILNPVLSPFLPCVGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...GACACAAGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGCTAGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLYHINSRVTEELWLGTKME*QTCRWA Trigger: CGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCC...TAGCCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTTGGATTATGAAAGAGCGTGGGCGACCCTGTaGTGCTGCAAGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKFKLNVHLSHELLDYERAWATL*CCKNLL Trigger: AAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGC...TCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGCTATCTCGCTTCACTATCTaGACCATTTCTTGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLYHINSRVTEELWLSRFTI*TISWLP Trigger: CGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGA...TAGCCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | TGTAATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGTCTCGCTTCACTATCTaGACCATTTCTTGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CNQLCLYHINSRVTEELWSRFTI*TISWLP Trigger: CGGGAGCCAAGAAATGGTCCAGATAGTGAAGCGAGA...CCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR TCA 90 bp | ATTATTTATCCACTCAGCAACTATGGTAGCCATCTCCTGGCTAAAATCGAGAACAGGGCCCACATTTTATaGTCTTGGTTTCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIYPLSNYGSHLLAKIENRAHIL*SWFQLH Trigger: GTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCT...GTTCTCGATTTTAGCCAGGAGATGGCTACCATAGTTGCTGAGTGGATAAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR GCA 90 bp | AATGCTTCCAACTGTTCAAGTCATATAGACAGTTGGGTTTATTGGCCTCTGAGACTCTTCCTGTGGTGCTaGAAGAACCTTCTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NASNCSSHIDSWVYWPLRLFLWC*KNLLVF Trigger: AAAGACAAGAAGGTTCTTGCAGCACCACAGGAAGAG...TCTCAGAGGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR GCA 90 bp | GAGAACAAAAGCATGTGGTATTCCTTTCTCACAGAGGTAAATATTGCCTTCTGGCTCTTCCTGTGGTGCTaGAAGAACCTTCTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ENKSMWYSFLTEVNIAFWLFLWC*KNLLVF Trigger: AAAGACAAGAAGGTTCTTGCAGCACCACAGGAAGAG...CCAGAAGGCAATATTTACCTCTGTGAGAAAGGAATACCACATGCTTTTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | GAGAACAAAAGCATGTGGTATTCCTTTCTCACAGAGGTAAATATTGCCTTCTGGCAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ENKSMWYSFLTEVNIAFWQGLCK*HVECGI Trigger: TATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTG...CCAGAAGGCAATATTTACCTCTGTGAGAAAGGAATACCACATGCTTTTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLNSNFSILNPVLSPFLPEPSCL*ESPKTQ Trigger: CTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTC...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CCA 90 bp | AATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTTGTGTCCATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSNFSILNPVLSPFLPCVHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...GACACAAGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAACTCTGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCACATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EELWLNSNFSILNPVLSPHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...TGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCAGAGTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| 3UTR CAA 72 bp | ATGGAATGCTTCCAACTGTTCAAGTCATATAGACAGTaGGGTTTATTGGCCTCTGAGATCTTAGGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MECFQLFKSYRQ*GLLASEILGLS Trigger: ACTCAGTCCTAAGATCTCAGAGGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAAGCATTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTAGGGCCCACATTTTATaGTCTTGGTTTCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLNSNFSILNPVLSPFLPRAHIL*SWFQLH Trigger: GTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCT...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: WLNSNFSILNPVLSPFLPSVQGL*KWHVEC Trigger: GCATTCTACGTGCCATTTGCAAAGGCCTTGTACACT...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR GCA 90 bp | AATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTTGTGTCAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NSNFSILNPVLSPFLPCVSVQGL*KWHVEC Trigger: GCATTCTACGTGCCATTTGCAAAGGCCTTGTACACT...GACACAAGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CCA 90 bp | CATGTCTTCATAGTACTTTACTGGACACCAGCCATCAGTTTTACCATAGTAAAAGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVFIVLYWTPAISFTIVKEPSCL*ESPKTQ Trigger: CTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTC...TTTTACTATGGTAAAACTGATGGCTGGTGTCCAGTAAAGTACTATGAAGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGGAGAGCTTTTCTCTACAAGACAATGGAATGCTTCCAACTGTTCAAGTCAGAGAACAAAAGCATGTaGTATTCCTTTCTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRAFLYKTMECFQLFKSENKSM*YSFLTE Trigger: CTCTGTGAGAAAGGAATACCACATGCTTTTGTTCTC...TGACTTGAACAGTTGGAAGCATTCCATTGTCTTGTAGAGAAAAGCTCTCCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037383.13 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATACCACATTAAGGGCCCACATTTTATaGTCTTGGTTTCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVAKATYEAVISFAYTTLRAHIL*SWFQLH Trigger: GTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCT...TAATGTGGTATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR TCA 90 bp | TGTAATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGGGAGAAACTCCTTTATaGTGTCATCATCTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CNQLCLYHINSRVTEELWGETPL*CHHLAS Trigger: TGAAGCGAGATGATGACATCATAAAGGAGTTTCTCC...CCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGGGAGAAACTCCTTTATaGTGTCATCATCTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLNSNFSILNPVLSPFLGETPL*CHHLAS Trigger: TGAAGCGAGATGATGACATCATAAAGGAGTTTCTCC...CAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTCATAGTACTTTACTGGACACCAGCCATCAGTTTTACCATAGTAAAAAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: HVFIVLYWTPAISFTIVKSVQGL*KWHVEC Trigger: GCATTCTACGTGCCATTTGCAAAGGCCTTGTACACT...TTTTACTATGGTAAAACTGATGGCTGGTGTCCAGTAAAGTACTATGAAGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTTGGATTATGAAAGAGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKFKLNVHLSHELLDYEREPSCL*ESPKTQ Trigger: CTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTC...TCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTTGGATTATGAACATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRKFKLNVHLSHELLDYEHSFDS*EEQKGV Trigger: CACGCCTTTCTGCTCTTCCCAACTATCGAACGAATG...TTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| 3UTR CAA 72 bp | TTCCAACTGTTCAAGTCATATAGACAGTTGGGTTTATaGGCCTCTGAGATCTTAGGACTGAGTCAATTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLFKSYRQLGL*ASEILGLSQLR Trigger: CCTTAATTGACTCAGTCCTAAGATCTCAGAGGCCAATAAACCCAACTGTCTATATGACTTGAACAGTTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR GCA 90 bp | TCAACTAAACAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATCTCTTCCTGTGGTGCTaGAAGAACCTTCTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STKQVAKATYEAVISFAYLFLWC*KNLLVF Trigger: AAAGACAAGAAGGTTCTTGCAGCACCACAGGAAGAG...ATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTGTTTAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | TCAACTAAACAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATCAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: STKQVAKATYEAVISFAYQGLCK*HVECGI Trigger: TATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTG...ATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTGTTTAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAACTCTGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCAGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EELWLNSNFSILNPVLSPVSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTAAC...TGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCAGAGTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGCTAGTTAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLYHINSRVTEELWLVSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTAAC...TAGCCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGCATGTGGTATTCCTTTCTCACAGAGGTAAATATTGCCTTCTGGAAAATCTTAAGCAAGGCAAAATaGTTGAAGGATATCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSMWYSFLTEVNIAFWKILSKAK*LKDIRQ Trigger: TTGACGGATATCCTTCAACCATTTTGCCTTGCTTAA...GATTTTCCAGAAGGCAATATTTACCTCTGTGAGAAAGGAATACCACATGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000219532.2 |
||
| 3UTR CAA 72 bp | AAGTTCAAGCTTAATGTTCATTTGTCCCATGAGCTTTaGGATTATGAAAGATTTTATGACTTCAGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: KFKLNVHLSHEL*DYERFYDFRTR Trigger: CCGTGTCCTGAAGTCATAAAATCTTTCATAATCCAAAAGCTCATGGGACAAATGAACATTAAGCTTGAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS CCA 90 bp | AGTGGCAAACTTGCCGTTGGGCGATTCAGACATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTGGGCGACAGGCAGCTCGGGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGKLAVGRFRHSFDS*EEQKGVGDRQLGDS Trigger: CGAGTCCCCGAGCTGCCTGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGAACGAATGTCTGAATCGCCCAACGGCAAGTTTGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS-3UTR CAA 90 bp | GACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGTATCTGGACCATTTCTaGGCTCCCGAGGTAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLAFQGSGGACWLSCGRMYLDHF*APEVGS Trigger: GCTGCCTACCTCGGGAGCCAAGAAATGGTCCAGATA...CATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037383.13 |
||
| CDS GCA 90 bp | TCGATAGTTGGGAAGAGCAGAAAGGCGTGGGCGACCCTGTGGTGCTaGAAGAACCTTCTTGTCTTTGGGAGTCACCGAAAACCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SIVGKSRKAWATLWC*KNLLVFGSHRKPSM Trigger: CATGCTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTACTCAGAGCCTGAAGCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATGCTGCAAGAACCTTCTaGTCTTTGGGAGTCACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QGTQSLKPGFADQLCRRHAARTF*SLGVTE Trigger: TTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC...ATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGCTTCAGGCTCTGAGTACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS CCA 90 bp | AAAGGCGTGGGCGACCCTGTGGTGCTGCAAGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAGCATGAGAGATTATCCATACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KGVGDPVVLQEPSCL*ESPKTQHERLSIPG Trigger: TCCCGGTATGGATAATCTCTCATGCTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCTTGTGCAGACACCAGGGAGATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFADQLCRRHPCADTREISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...CTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGAGCTGTCCAGTATGTCAGGAAGGAAGCACTCCTCCGCGTCTCGGCCAAAGTGTACAAGGCCTTaGCAAATGGCACGTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VAELSSMSGRKHSSASRPKCTRP*QMARRM Trigger: CATTCTACGTGCCATTTGCAAAGGCCTTGTACACTT...TGGCCGAGACGCGGAGGAGTGCTTCCTTCCTGACATACTGGACAGCTCTGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS CCA 90 bp | AGCAGAAAGGCGTGGGCGACCGGGAATGATGAAGATAAGCTGTTTTaGCTTGCTGACGTCTTGTTTCTCAAAGAGGTTAGTCCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRKAWATGNDEDKLF*LADVLFLKEVSPGP Trigger: GGGCCCTGGACTAACCTCTTTGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTATCTTCATCATTCCCGGTCGCCCACGCCTTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218305.2 ENSMUST00000219058.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | GACCTGGCCTTTCAGGGCTCAGGAGGAGCCTGTTGGTTATCCTGTGGCAGGATGATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLAFQGSGGACWLSCGRMISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...CATCCTGCCACAGGATAACCAACAGGCTCCTCCTGAGCCCTGAAAGGCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTACTCAGAGCCTGAAGCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGTQSLKPGFADQLCRRHSKAKW*KDIRQR Trigger: CCTTTGACGGATATCCTTCAACCATTTTGCCTTGCT...ATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGCTTCAGGCTCTGAGTACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGTACTCAGAGCCTGAAGCCTGGCTTCGCAGATCAGCTCTGCAGGAGGCATCCACATTTTATGATCTaGGTTTCAACTCCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QGTQSLKPGFADQLCRRHPHFMI*VSTPPQ Trigger: CTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGG...ATGCCTCCTGCAGAGCTGATCTGCGAAGCCAGGCTTCAGGCTCTGAGTACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGGCTGCAAGAACCTTCTaGTCTTTGGGAGTCACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQAARTF*SLGVTE Trigger: TTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC...CTGGAGAGATGGCTCAGTGGTTAAGAGTACTGACTGCTCTTCCAGAGGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS GCA 90 bp | TATCCATACCGGGAAGCGGCTCTTCATCAAAGTGTACAAGGCCTTTaGAAATGGCACGTAGAATGCGGAATAGCCTGGGTTACCGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YPYREAALHQSVQGL*KWHVECGIAWVTGN Trigger: ATTCCCGGTAACCCAGGCTATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTGTACACTTTGATGAAGAGCCGCTTCCCGGTATGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CCA 90 bp | TGCGGAATAGCCTGGGTTACCGGGAATGATGAAGATAAGCTGTTTTaGCTTGCTGACGTCTTGTTTCTCAAAGAGGTTAGTCCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGIAWVTGNDEDKLF*LADVLFLKEVSPGP Trigger: GGGCCCTGGACTAACCTCTTTGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTATCTTCATCATTCCCGGTAACCCAGGCTATTCCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CCA 90 bp | TACCGGGAAGCGGCTCTTCATCAAAGTGTACAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATAGCCTGGGTTACCGGGAATGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: YREAALHQSVQGLCK*HVECGIAWVTGNDE Trigger: TTCATCATTCCCGGTAACCCAGGCTATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTGTACACTTTGATGAAGAGCCGCTTCCCGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATGCTGCAAGAACCTTCTaGTCTTTGGGAGTCACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HFLAPEVGSVSKAKWLKDAARTF*SLGVTE Trigger: TTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC...ATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTCGGAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSASRPGICFSTGLQGFRSKAKW*KDIRQR Trigger: CCTTTGACGGATATCCTTCAACCATTTTGCCTTGCT...CCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS TCA 90 bp | GCTGCAAGAACCTTCTTGTCTTTGGGAGTCACCGAAAACCCAGCATaGGAGATTATCCATACCGGGAAGCGGCTCTTCATCAAAGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AARTFLSLGVTENPA*EIIHTGKRLFIKVY Trigger: GTACACTTTGATGAAGAGCCGCTTCCCGGTATGGATAATCTCTCATGCTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CCA 90 bp | GAGCATTTGACTCTTCCTGTGGTGCTGCAAGAACCTTCTTGTCTTTaGGAGTCACCGAAAACCCAGCATGAGAGATTATCCATACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EHLTLPVVLQEPSCL*ESPKTQHERLSIPG Trigger: TCCCGGTATGGATAATCTCTCATGCTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGCACCACAGGAAGAGTCAAATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000218883.2 ENSMUST00000220274.2 |
||
| CDS-3UTR CAA 90 bp | TGGCATCATGAATGGAATGGGTGGCTCACTGCATCCTGTCCATGGAGGTCACTAATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WHHEWNGWLTASCPWRSLISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...TAGTGACCTCCATGGACAGGATGCAGTGAGCCACCCATTCCATTCATGATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CAA 90 bp | AGCATAGAGCAGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTTGCCGTTGCTGCAAGAACCTTCTaGTCTTTGGGAGTCACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIEQVSKLAQKWSGKLAVAARTF*SLGVTE Trigger: TTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC...AACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCTCTATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLAPEVGSVSKAKWLKDIISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...GATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCTTGGCTCCCGAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFLAPEVGSVSKAKWLKDISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...ATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTCGGGAGCCAAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTCGGTATTTTGTGCTCTATTaGACCATTCAGACCATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSASRPGICFSTGLQGFRYFVLY*TIQTID Trigger: GTCTATGGTCTGAATGGTCAAATAGAGCACAAAATA...CCGAAAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTCCGCGTCTCGGCCAGGAATATGCTTTTCTACTGGACTTCAAGGCTTTATTTTGTGCTCTATTaGACCATTCAGACCATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALLRVSARNMLFYWTSRLYFVLY*TIQTID Trigger: GTCTATGGTCTGAATGGTCAAATAGAGCACAAAATA...AAGCCTTGAAGTCCAGTAGAAAAGCATATTCCTGGCCGAGACGCGGAGGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTAGGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAAGGAAGCCACATTTTATGATCTaGGTTTCAACTCCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EVGSVSKAKWLKDIRQRKPHFMI*VSTPPQ Trigger: CTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGG...CTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCCTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAAGGAAGTTCAAGAAGTGTACAAGGCCTTaGCAAATGGCACGTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GSVSKAKWLKDIRQRKFKKCTRP*QMARRM Trigger: CATTCTACGTGCCATTTGCAAAGGCCTTGTACACTT...CTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTTATCTGGACCATTTCTaGGCTCCCGAGGTAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLNSNFSILNPVLSPFLPYLDHF*APEVGS Trigger: GCTGCCTACCTCGGGAGCCAAGAAATGGTCCAGATA...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTTGTGTCTATCTGGACCATTTCTaGGCTCCCGAGGTAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSNFSILNPVLSPFLPCVYLDHF*APEVGS Trigger: GCTGCCTACCTCGGGAGCCAAGAAATGGTCCAGATA...GACACAAGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS CCA 90 bp | ATAGGTGCCTACGGAATGGCCAATGAGTATAAGCTTCACATCCTTTaGCACGTGAGCTCTCAGAAAAGCTATTTTGTGCTCTATTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IGAYGMANEYKLHIL*HVSSQKSYFVLYLT Trigger: GGTCAAATAGAGCACAAAATAGCTTTTCTGAGAGCTCACGTGCCAAAGGATGTGAAGCTTATACTCATTGGCCATTCCGTAGGCACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCGTTAGCAAGGCAAAATGGTTGAAGGATATCCGTCAAAGGAAGTTCAAGCCACATTTTATGATCTaGGTTTCAACTCCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSVSKAKWLKDIRQRKFKPHFMI*VSTPPQ Trigger: CTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGG...CTTGAACTTCCTTTGACGGATATCCTTCAACCATTTTGCCTTGCTAACGCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTAGCATAGAGCAGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTTATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSIEQVSKLAQKWSGKLISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...AAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCTCTATGCTACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220345.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTGCTGGGAATCGAACTCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGCWESNSGPLEEQSVLLKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...TAAGAGTACTGACTGCTCTTCCAGAGGTCCTGAGTTCGATTCCCAGCAACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | TATCCACTCAGCAACTATGGTAGCCATCTCCTGGCTAAAATCGAGAACAAAAGCAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YPLSNYGSHLLAKIENKSSKAKW*KDIRQR Trigger: CCTTTGACGGATATCCTTCAACCATTTTGCCTTGCT...GCTTTTGTTCTCGATTTTAGCCAGGAGATGGCTACCATAGTTGCTGAGTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000219532.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAACTCTGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCAGCTGCAAGAACCTTCTaGTCTTTGGGAGTCACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: EELWLNSNFSILNPVLSPAARTF*SLGVTE Trigger: TTCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGC...TGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCAGAGTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTAAGTGTACAAGGCCTTaGCAAATGGCACGTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: WLNSNFSILNPVLSPFLPKCTRP*QMARRM Trigger: CATTCTACGTGCCATTTGCAAAGGCCTTGTACACTT...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWLNSNFSILNPVLSPFLSKAKW*KDIRQR Trigger: CCTTTGACGGATATCCTTCAACCATTTTGCCTTGCT...CAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAATAGTAACTTCAGCATCTTAAATCCAGTTCTTAGCCCATTCTTGCCTCCACATTTTATGATCTaGGTTTCAACTCCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WLNSNFSILNPVLSPFLPPHFMI*VSTPPQ Trigger: CTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGG...AGGCAAGAATGGGCTAAGAACTGGATTTAAGATGCTGAAGTTACTATTTAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CAA 90 bp | CATGTCTTCATAGTACTTTACTGGACACCAGCCATCAGTTTTACCATAGTAAAAAAGTGTACAAGGCCTTaGCAAATGGCACGTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: HVFIVLYWTPAISFTIVKKCTRP*QMARRM Trigger: CATTCTACGTGCCATTTGCAAAGGCCTTGTACACTT...TTTTACTATGGTAAAACTGATGGCTGGTGTCCAGTAAAGTACTATGAAGACATG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATACCACATTAATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QVAKATYEAVISFAYTTLISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...TAATGTGGTATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTAAATTCAACTAAACAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCAGCAAGGCAAAATGGTaGAAGGATATCCGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVNSTKQVAKATYEAVISSKAKW*KDIRQR Trigger: CCTTTGACGGATATCCTTCAACCATTTTGCCTTGCT...GCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTGTTTAGTTGAATTTACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGTTAAAACACCTTTCCAAAGATGATGTCCTAGGAAATTTTCAGAAGGGACCACATTTTATGATCTaGGTTTCAACTCCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NKLKHLSKDDVLGNFQKGPHFMI*VSTPPQ Trigger: CTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGG...TCCCTTCTGAAAATTTCCTAGGACATCATCTTTGGAAAGGTGTTTTAACTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218305.2 |
||
| CDS-3UTR CAA 90 bp | TCAACTAAACAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STKQVAKATYEAVISFAYISCFG*LTSCFS Trigger: TGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTAT...ATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTGTTTAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218086.2 ENSMUST00000219043.2 |
||
| CDS-3UTR CAA 90 bp | TGTAATCAGCTTTGCTTATACCACATTAACTCAAGGGTAACAGAAGAACTCTGGTATTTTGTGCTCTATTaGACCATTCAGACCATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CNQLCLYHINSRVTEELWYFVLY*TIQTID Trigger: GTCTATGGTCTGAATGGTCAAATAGAGCACAAAATA...CCAGAGTTCTTCTGTTACCCTTGAGTTAATGTGGTATAAGCAAAGCTGATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218086.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAACACCTTTCCAAAGATGATGTCCTAGGAAATTTTCAGAAGGGAAGAGTCAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LKHLSKDDVLGNFQKGRVKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...GACTCTTCCCTTCTGAAAATTTCCTAGGACATCATCTTTGGAAAGGTGTTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGCAAAAGCTACTTATGAAGCTGTAATCAGCTTTGCTTATACCACATTAAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QVAKATYEAVISFAYTTLKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...TAATGTGGTATAAGCAAAGCTGATTACAGCTTCATAAGTAGCTTTTGCCACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217872.2 ENSMUST00000218086.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCATGTGGTATTCCTTTCTCACAGAGGTAAATATTGCCTTCTGGAAAATAAGCTTAATGTTCATTaGTCCCATGAGCTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKHVVFLSHRGKYCLLENKLNVH*SHELLD Trigger: ATCCAAAAGCTCATGGGACAAATGAACATTAAGCTT...ATTTTCCAGAAGGCAATATTTACCTCTGTGAGAAAGGAATACCACATGCTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169104.3 ENSMUST00000219532.2 |
||
| CDS CCA 72 bp | GACATTCGTTCGATAGTTGGGAAGAGCAGAAAGGCGTaGGCGACAGGCAGCTCGGGGACTCGCTTCATCACG | + |
|
Preference number: 6 (lower is better) Translates to: DIRSIVGKSRKA*ATGSSGTRFIT Trigger: CGTGATGAAGCGAGTCCCCGAGCTGCCTGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGAACGAATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS GCA 72 bp | GTTGGGAAGAGCAGAAAGGCGTGGGCGACCCTGTGGTaGTGCAAGAACCTTCTTGTCTTTGGGAGTCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: VGKSRKAWATLW*CKNLLVFGSHR Trigger: TCGGTGACTCCCAAAGACAAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGCCTTTCTGCTCTTCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS CCA 72 bp | CTTGCCGTTGGGCGATTCAGACATTCGTTCGATAGTTaGGAAGAGCAGAAAGGCGTGGGCGACAGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAVGRFRHSFDS*EEQKGVGDRQL Trigger: GAGCTGCCTGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGAACGAATGTCTGAATCGCCCAACGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS CCA 72 bp | ATAGTTGGGAAGAGCAGAAAGGCGTGGGCGACCCTGTaGTGCTGCAAGAACCTTCTTGTCTTTGGGAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: IVGKSRKAWATL*CCKNLLVFGSH Trigger: GTGACTCCCAAAGACAAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGCCTTTCTGCTCTTCCCAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS CCA 72 bp | GACATTCGTTCGATAGTTGGGAAGAGCAGAAAGGCGTaGGCGACCCTGTGGTGCTGCAAGAACCTTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DIRSIVGKSRKA*ATLWCCKNLLV Trigger: GACAAGAAGGTTCTTGCAGCACCACAGGGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGAACGAATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219043.2 ENSMUST00000219357.2 |
||
| CDS CCA 72 bp | GCGGCTCTTCATCAAAGTGTACAAGGCCTTTGCAAATaGCACGTAGAATGCGGAATAGCCTGGGTTACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AALHQSVQGLCK*HVECGIAWVTG Trigger: CCCGGTAACCCAGGCTATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTGTACACTTTGATGAAGAGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CAA 90 bp | GAAAGGCGTGGGCGACCGGGAATGATGAAGATAAGCTGTTTTGGCTaGCTGACGTCTTGTTTCTCAAAGAGGTTAGTCCAGGGCCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: ERRGRPGMMKISCFG*LTSCFSKRLVQGPH Trigger: ATGTGGGCCCTGGACTAACCTCTTTGAGAAACAAGACGTCAGCAAGCCAAAACAGCTTATCTTCATCATTCCCGGTCGCCCACGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218305.2 ENSMUST00000219058.2 ENSMUST00000220345.2 |
||
| CDS CAA 90 bp | TTATCCATACCGGGAAGCGGCTCTTCATCAAAGTGTACAAGGCCTTaGCAAATGGCACGTAGAATGCGGAATAGCCTGGGTTACCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSIPGSGSSSKCTRP*QMARRMRNSLGYRE Trigger: TTCCCGGTAACCCAGGCTATTCCGCATTCTACGTGCCATTTGCAAAGGCCTTGTACACTTTGATGAAGAGCCGCTTCCCGGTATGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS TCA 72 bp | ACCTTCTTGTCTTTGGGAGTCACCGAAAACCCAGCATaGGAGATTATCCATACCGGGAAGCGGCTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TFLSLGVTENPA*EIIHTGKRLFI Trigger: GATGAAGAGCCGCTTCCCGGTATGGATAATCTCTCATGCTGGGTTTTCGGTGACTCCCAAAGACAAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CCA 72 bp | GACATTCGTTCGATAGTTGGGAAGAGCAGAAAGGCGTaGGCGACCGGGAATGATGAAGATAAGCTGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DIRSIVGKSRKA*ATGNDEDKLFW Trigger: CCAAAACAGCTTATCTTCATCATTCCCGGTCGCCCACGCCTTTCTGCTCTTCCCAACTATCGAACGAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218305.2 ENSMUST00000219058.2 ENSMUST00000220345.2 |
||
| CDS CCA 72 bp | GGCCTTTGCAAATGGCACGTAGAATGCGGAATAGCCTaGGTTACCGGGAATGATGAAGATAAGCTGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLCKWHVECGIA*VTGNDEDKLFW Trigger: CCAAAACAGCTTATCTTCATCATTCCCGGTAACCCAGGCTATTCCGCATTCTACGTGCCATTTGCAAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000218086.2 ENSMUST00000219043.2 ENSMUST00000219357.2 ENSMUST00000220274.2 |
||
| CDS CAA 72 bp | CGAAACTGGCACAAAAATGGAGTGGCAAACTTGCCGTaGGGCGATTCAGACATTCGTTCGATAGTTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RNWHKNGVANLP*GDSDIRSIVGK Trigger: CTTCCCAACTATCGAACGAATGTCTGAATCGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217872.2 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS CAA 90 bp | AGCAGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTTGCCGTaGGGCGATTCAGACATTCGTTCGATAGTTGGGAAGAGCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRYRNWHKNGVANLP*GDSDIRSIVGKSRK Trigger: CTTTCTGCTCTTCCCAACTATCGAACGAATGTCTGAATCGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217872.2 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS CAA 90 bp | TCTTGTTTCTCAAAGAGGTTAGTCCAGGGCCCACATTTTATGATCTaGGTTTCAACTCCACCACAGAGAAAGAACTCCTCACGCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCFSKRLVQGPHFMI*VSTPPQRKNSSRTG Trigger: CCCTGTGCGTGAGGAGTTCTTTCTCTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCTGGACTAACCTCTTTGAGAAACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220274.2 ENSMUST00000220345.2 |
||
| CDS CCA 72 bp | CATAGAGCAGGTATCGAAACTGGCACAAAAATGGAGTaGCAAACTTGCCGTTGGGCGATTCAGACATTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: HRAGIETGTKME*QTCRWAIQTFV Trigger: AACGAATGTCTGAATCGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCTGCTCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217872.2 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
||
| CDS CAA 72 bp | AGGTATCGAAACTGGCACAAAAATGGAGTGGCAAACTaGCCGTTGGGCGATTCAGACATTCGTTCGATAGTT | + |
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Preference number: 6 (lower is better) Translates to: RYRNWHKNGVAN*PLGDSDIRSIV Trigger: AACTATCGAACGAATGTCTGAATCGCCCAACGGCAAGTTTGCCACTCCATTTTTGTGCCAGTTTCGATACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217872.2 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218883.2 |
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| CDS CAA 72 bp | TCAAAGAGGTTAGTCCAGGGCCCACATTTTATGATCTaGGTTTCAACTCCACCACAGAGAAAGAACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SKRLVQGPHFMI*VSTPPQRKNSS Trigger: TGAGGAGTTCTTTCTCTGTGGTGGAGTTGAAACCAAGATCATAAAATGTGGGCCCTGGACTAACCTCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000037383.13 ENSMUST00000169104.3 ENSMUST00000217999.2 ENSMUST00000218086.2 ENSMUST00000218305.2 ENSMUST00000219043.2 ENSMUST00000219058.2 ENSMUST00000219357.2 ENSMUST00000220274.2 ENSMUST00000220345.2 |
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