Pregenerated sensors for LCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002699Ensembl transcript IDs: ENSMUST00000052413.12, ENSMUST00000109329.9
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGATaGAGCCCAGTTAGGCAGAAGATGCAAGACATGGAGGGAAATGCG | + |
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Preference number: 1 (lower is better) Translates to: APDQGSIGQWWNLRR*SPVRQKMQDMEGNA Trigger: CGCATTTCCCTCCATGTCTTGCATCTTCTGCCTAACTGGGCTTCATCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CCA 90 bp | GGAATCTTAGGAGATGAAGCCCAGTTAGGCAGAAGATGCAAGACATaGAGGGAAATGCGCTTCTTGTCCTTTCTTTTGTTTCCCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: GILGDEAQLGRRCKT*REMRFLSFLLFPSH Trigger: GTGACTGGGAAACAAAAGAAAGGACAAGAAGCGCATTTCCCTCCATGTCTTGCATCTTCTGCCTAACTGGGCTTCATCTCCTAAGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 90 bp | GAGGGAAATGCGCTTCTTGTCCTTTCTTTTGTTTCCCAGTCACCATaGAGTGAACGGATGTCCTCACATTCTCACTTCATGATCCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: EGNALLVLSFVSQSP*SERMSSHSHFMILY Trigger: ATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAAGCGCATTTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CCA 90 bp | CAGCTTGCTCCACATTATTTCTGTACTGTATCAAGTACTGTATTTTaGGATGGATGTTCAAAATCTCATGTCTGCCATGCACTCTTAGAC | + |
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Preference number: 1 (lower is better) Translates to: QLAPHYFCTVSSTVF*DGCSKSHVCHALLD Trigger: GTCTAAGAGTGCATGGCAGACATGAGATTTTGAACATCCATCCCAAAATACAGTACTTGATACAGTACAGAAATAATGTGGAGCAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR TCA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGGTGATTTCGCCGCAGTaGCCACCAAGTCAGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: CACVCVYQALLVFPGDLQVISPQ*PPSQKG Trigger: GCCTTTCTGACTTGGTGGTCACTGCGGCGAAATCAC...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CAA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTaGCAGGCCCAAAGGAACAGGAACAGGCGACCATCCCAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ERMSSHSHFMILYEL*QAQRNRNRRPSQKV Trigger: GACTTTCTGGGATGGTCGCCTGTTCCTGTTCCTTTGGGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CAA 90 bp | GCCCAGTTAGGCAGAAGATGCAAGACATGGAGGGAAATGCGCTTCTaGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTGAACGGATGT | + |
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Preference number: 2 (lower is better) Translates to: AQLGRRCKTWREMRF*SFLLFPSHHEVNGC Trigger: ACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAAGCGCATTTCCCTCCATGTCTTGCATCTTCTGCCTAACTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR TCA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGGAACATGCCTCGGCCTaGCAAAAGATTCATTATAAA | + |
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Preference number: 2 (lower is better) Translates to: CACVCVYQALLVFPGDLQEHASA*QKIHYK Trigger: TTTATAATGAATCTTTTGTCAGGCCGAGGCATGTTC...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CAA 90 bp | AGAAGATGCAAGACATGGAGGGAAATGCGCTTCTTGTCCTTTCTTTaGTTTCCCAGTCACCATGAAGTGAACGGATGTCCTCACATTCTC | + |
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Preference number: 2 (lower is better) Translates to: RRCKTWREMRFLSFL*FPSHHEVNGCPHIL Trigger: GAGAATGTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAAGCGCATTTCCCTCCATGTCTTGCATCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR GCA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGGAAGTTATCCCCACATaGATTAATCTCATTACGAAA | + |
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Preference number: 2 (lower is better) Translates to: CACVCVYQALLVFPGDLQEVIPT*INLITK Trigger: TTTCGTAATGAGATTAATGCATGTGGGGATAACTTC...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR GCA 90 bp | GGAGATCTGAGGTGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCACTGAAGGCCAGCGAATaGAAGTATCATCTAGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: GDLRCFKGFKSQSEDKIALKASE*KYHLVG Trigger: TCCTACTAGATGATACTTGCATTCGCTGGCCTTCAG...TGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCACCTCAGATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CAA 90 bp | TGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCAGTTTaGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CFKGFKSQSEDKIAV*QHTCWANKAENQSR Trigger: TCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAACTGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CAA 90 bp | TCAGCTTGCTCCACATTATTTCTGTACTGTATCAAGTACTGTATTTaGGGATGGATGTTCAAAATCTCATGTCTGCCATGCACTCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: SACSTLFLYCIKYCI*GWMFKISCLPCTLR Trigger: TCTAAGAGTGCATGGCAGACATGAGATTTTGAACATCCATCCCAAAATACAGTACTTGATACAGTACAGAAATAATGTGGAGCAAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR GCA 90 bp | AATGACCAGTTTCAGTACTTTTTCAGCTTGCTCCACATTATTTCTGTACTGTATTCAAAATCTCATGTCTaGCATGCACTCTTAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: NDQFQYFFSLLHIISVLYSKSHV*HALLDF Trigger: GAAGTCTAAGAGTGCATGGCAGACATGAGATTTTGA...ATACAGTACAGAAATAATGTGGAGCAAGCTGAAAAAGTACTGAAACTGGTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | CAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGATaGAGCCCAGTTAGGCAGAAGATGCAAGACATGGAG | + |
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Preference number: 3 (lower is better) Translates to: QGSIGQWWNLRR*SPVRQKMQDME Trigger: CTCCATGTCTTGCATCTTCTGCCTAACTGGGCTTCATCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR CAA 90 bp | GGAGATCTGAGGTGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCACCGACCAGGGCAGCATaGGGCAGTGGTGGAATCTTA | + |
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Preference number: 3 (lower is better) Translates to: GDLRCFKGFKSQSEDKIAPTRAA*GSGGIL Trigger: TAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGG...TGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCACCTCAGATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | ACGGATGTCCTCACATTCTCACTTCATGATCCTCTATaGACTGTTGCAGGCCCAAAGGAACAGGAACAGGCG | + |
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Preference number: 3 (lower is better) Translates to: TDVLTFSLHDPL*TVAGPKEQEQA Trigger: CGCCTGTTCCTGTTCCTTTGGGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGCGTGTGTGTGTGTTTACCAAGCATTaGTCGTCTTCCCAGGAGACCTTCAGTACTAGAACG | + |
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Preference number: 3 (lower is better) Translates to: CVCVRVCVFTKH*SSSQETFSTRT Trigger: CGTTCTAGTACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR CAA 90 bp | GCTCGTCTTCCCAGGAGACCTTCAGTACTAGAACGGAGGCCACCATGGATGGAGGAGCCTCTTAAGTTATaGCTGCTCCAAAATGAATTT | + |
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Preference number: 3 (lower is better) Translates to: ARLPRRPSVLERRPPWMEEPLKL*LLQNEF Trigger: AAATTCATTTTGGAGCAGCAATAACTTAAGAGGCTC...CTCCATCCATGGTGGCCTCCGTTCTAGTACTGAAGGTCTCCTGGGAAGACGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR-3UTR CAA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCTGTGTTTACCAAGCATaGCTCGTCTTCCCAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: ERMSSHSHFMILYELLQACVYQA*LVFPGD Trigger: GTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACA...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | CATGAAGTGAACGGATGTCCTCACATTCTCACTTCATaGTCCTCTATGAACTGTTGCAGGCCCAAAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: HEVNGCPHILTS*SSMNCCRPKGT Trigger: TGTTCCTTTGGGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTCACTTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | GCGCTTCTTGTCCTTTCTTTTGTTTCCCAGTCACCATaGAGTGAACGGATGTCCTCACATTCTCACTTCATG | + |
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Preference number: 3 (lower is better) Translates to: ALLVLSFVSQSP*SERMSSHSHFM Trigger: CATGAAGTGAGAATGTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CCA 72 bp | GGAGATGAAGCCCAGTTAGGCAGAAGATGCAAGACATaGAGGGAAATGCGCTTCTTGTCCTTTCTTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GDEAQLGRRCKT*REMRFLSFLLF Trigger: AAACAAAAGAAAGGACAAGAAGCGCATTTCCCTCCATGTCTTGCATCTTCTGCCTAACTGGGCTTCATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR CCA 72 bp | GTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTaGATAGAATTCTCCAAAGGCCCACATGGTAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: VGLIKQKTRAEV*IEFSKGPHGRS Trigger: GCTTCTACCATGTGGGCCTTTGGAGAATTCTATCCAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | TCTTGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTaGACGGATGTCCTCACATTCTCACTTCATGATCCT | + |
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Preference number: 3 (lower is better) Translates to: SCPFFCFPVTMK*TDVLTFSLHDP Trigger: AGGATCATGAAGTGAGAATGTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| 3UTR TCA 72 bp | GGCTCAGGCCTAAGCAGCACCAACAAATTACACCTATaGTGTTGGATTATTTCGAATGAAAGTTCAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GSGLSSTNKLHL*CWIISNESSSK Trigger: CTTGCTTGAACTTTCATTCGAAATAATCCAACATCATAGGTGTAATTTGTTGGTGCTGCTTAGGCCTGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGTTCTTGTCCTTTCTTTaGTTTCCCAGTCACCATGAA | + |
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Preference number: 3 (lower is better) Translates to: VLQHTCWANKAENQSRGLFLSFL*FPSHHE Trigger: TTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAA...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS-3UTR TCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCGTCAAGAGGGGCCAGTaGGCGGTCCAGGGGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSVKRGQ*AVQGRF Trigger: AAACCTCCCCTGGACCGCTCACTGGCCCCTCTTGAC...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR GCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCGTGGCGAGTGATTCCTaGCTGTTGGCAGGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAVASDS*LLAGEG Trigger: TCCCTCCCCTGCCAACAGGCAGGAATCACTCGCCAC...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTCTCAGTGGGGGCACTaGAGGCTGCTGGGAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSSQWGH*RLLGDL Trigger: AAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCTCTTCGTGGTTGGGATaGGGTGGAGACAGTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTASSWLG*GGDSGE Trigger: CTCGCCACTGTCTCCACCCCATCCCAACCACGAAGA...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCGAGCCTCCTCGTTGTTaGAGGGTGGAGGCTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAEPPRC*RVEAHS Trigger: ACTATGAGCCTCCACCCTCCAACAACGAGGAGGCTC...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTCCCCTTCCATGCCTTaGAACTGGTGGCTTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSSPSMP*NWWLPR Trigger: ACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR TCA 90 bp | GCTCGTCTTCCCAGGAGACCTTCAGTACTAGAACGGAGGCCACCATGGATGGAGCCAGGAGATGGAGGCTaGGGCCTGTTTGGAACCGGC | + |
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Preference number: 4 (lower is better) Translates to: ARLPRRPSVLERRPPWMEPGDGG*GLFGTG Trigger: GCCGGTTCCAAACAGGCCTCAGCCTCCATCTCCTGG...CTCCATCCATGGTGGCCTCCGTTCTAGTACTGAAGGTCTCCTGGGAAGACGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCTTCACTTCTGAGAGGTaGCCTGTTGCCTGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAFTSER*PVAWTL Trigger: CAAGGTCCAGGCAACAGGCCACCTCTCAGAAGTGAA...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR TCA 90 bp | TGGCCCCCTGCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGAAGGGAGGCACTCTGCTaGAAGCCAATGTTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: WPPAPDQGSIGQWWNLRRREALC*KPMLLS Trigger: AGAAAGCAACATTGGCTTTCAGCAGAGTGCCTCCCT...TCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGCAGGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS-3UTR CCA 90 bp | TGGCCCCCTGCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGACTCCTCAAGAAACCGTaGAATCTGGGGTTTGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: WPPAPDQGSIGQWWNLRRLLKKP*NLGFAC Trigger: ACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAG...TCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGCAGGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTGTTTCCACTTCTGCTaGGCTCTTCGTGGTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSCFHFC*ALRGWD Trigger: ATCCCAACCACGAAGAGCCCAGCAGAAGTGGAAACA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCTTCTTGGAGCTGGGCTaGACAGATCTCGAAGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAFLELG*TDLEGN Trigger: ATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAA...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCAGCAGCTTCTGCCTCTaGTCGGGTGATATAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTASSFCL*SGDIRD Trigger: GTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCT...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR TCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCGTTTCTTTCCTAGTATaGAGGGCTCTCGGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAVSFLV*RALGQE Trigger: CTCTTGACCGAGAGCCCTTCATACTAGGAAAGAAAC...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR GCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCCCAGGGGAGGTTTTGTaGTTCTGTCTATTGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSPGEVL*FCLLME Trigger: CTCCATCAATAGACAGAAGCACAAAACCTCCCCTGG...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR GCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTTCCTCGAAGTCCAGTaGCCAACAAGTAGACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSFLEVQ*PTSRLD Trigger: GTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCGTCGGTCGATGTACATaGAGTTGGTGTTGTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSVGRCT*SWCCGK Trigger: CTTTCCACAACACCAACTCCATGTACATCGACCGAC...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTCTGTCCATGGCTGGTaGCAAAGGAGGCTTTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSSVHGW*QRRLLY Trigger: ATACAAAAGCCTCCTTTGCCACCAGCCATGGACAGA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR TCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCTGTAGTTCAGCTTCCTaGAATAGTCAGCGAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTACSSAS*NSQRGC Trigger: ACAACCTCGCTGACTATTTCAGGAAGCTGAACTACA...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS-3UTR TCA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGGTCAAGAGGGGCCAGTaGGCGGTCCAGGGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CACVCVYQALLVFPGDLQVKRGQ*AVQGRF Trigger: AAACCTCCCCTGGACCGCTCACTGGCCCCTCTTGAC...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GCTCGTCTTCCCAGGAGACCTTCAGTACTAGAACGGAGGCCACCATGGATGGAGTTCTGCCTTCACTTCTaGGAGGTGGCCTGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLPRRPSVLERRPPWMEFCLHF*EVACCL Trigger: CAGGCAACAGGCCACCTCTCAGAAGTGAAGGCAGAA...CTCCATCCATGGTGGCCTCCGTTCTAGTACTGAAGGTCTCCTGGGAAGACGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | CCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGATGAAGCCCAGTTAGGCAGGATGGAGCTCTaGAGAGCCTCCTCGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTRAALGSGGILGDEAQLGRMEL*RASSLL Trigger: CAACAACGAGGAGGCTCTGCAGAGCTCCATCCTGCC...TAACTGGGCTTCATCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCTGGAGCAGGCAACTTTaGTGTCTTGTTGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTAWSRQL*CLVVST Trigger: AGTGGAAACAACAAGACAGCAAAGTTGCCTGCTCCA...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCCTGCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGACGAGCACCATCAATGTaGTATTTCTTCACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WPPAPDQGSIGQWWNLRRRAPSM*YFFTAF Trigger: GAAGGCTGTGAAGAAATACCACATTGATGGTGCTCG...TCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGCAGGGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCGAGCACCATCAATGTaGTATTTCTTCACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTARAPSM*YFFTAF Trigger: GAAGGCTGTGAAGAAATACCACATTGATGGTGCTCG...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR GCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGCTGCTGGGAGACCTTaGCAGTGGGAGGTCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAAAGRP*QWEVGR Trigger: TCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGGCACTGGAGGCTGCTaGGAGACCTTGCCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAGTGGC*ETLPVG Trigger: TCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCGGCACTGGAGGCTGCTaGGAGACCTTGCCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERMSSHSHFMILYELLQAGTGGC*ETLPVG Trigger: TCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCC...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GCTCGTCTTCCCAGGAGACCTTCAGTACTAGAACGGAGGCCACCATGGATGGAGGTTTCTTTCCTAGTATaGAGGGCTCTCGGTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLPRRPSVLERRPPWMEVSFLV*RALGQE Trigger: CTCTTGACCGAGAGCCCTTCATACTAGGAAAGAAAC...CTCCATCCATGGTGGCCTCCGTTCTAGTACTGAAGGTCTCCTGGGAAGACGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGGCAGGATGGAGCTCTaGAGAGCCTCCTCGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAGRMEL*RASSLL Trigger: CAACAACGAGGAGGCTCTGCAGAGCTCCATCCTGCC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCATTCAACTGCATAGTTaGTATACAGTATGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCAHSPRLLTGVHTALGSIQLHS*YTVWDL Trigger: CAGATCCCATACTGTATAGCAACTATGCAGTTGAAT...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTGGATCATCATCATTaGGACTTTCATAGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: APDWCAHSPRLLTGVHTALDHHH*DFHSHL Trigger: AAGATGACTATGAAAGTCCCAATGATGATGATCCAG...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTTGTTGTGGAAAGAGTTaGGGGGCAGGATGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVCVFTKHCSSSQETFSCCGKS*GAGWSS Trigger: AGAGCTCCATCCTGCCCCCCAACTCTTTCCACAACA...ACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGTGGTTGGGATGGGGTaGAGACAGTGGCGAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAVVGMG*RQWRVI Trigger: AATCACTCGCCACTGTCTCCACCCCATCCCAACCAC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTTCACTTCTGAGAGGTaGCCTGTTGCCTGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CACVCVYQALLVFPGDLQFTSER*PVAWTL Trigger: CAAGGTCCAGGCAACAGGCCACCTCTCAGAAGTGAA...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GACAGCAAAGCTGCATCACTGAACCTAAGCCTATTTTCTTCTTGTATGTTCAGAGGGGGCACTGGAGGCTaGTGGGAGACCTTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKAASLNLSLFSSCMFRGGTGG*WETLPV Trigger: CACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCCCCC...TCTGAACATACAAGAAGAAAATAGGCTTAGGTTCAGTGATGCAGCTTTGCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTTGTTGTTTCCACTTCTaGTGGGCTCTTCGTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVCVFTKHCSSSQETFSCCFHF*WALRGW Trigger: CCAACCACGAAGAGCCCAGCAGAAGTGGAAACAACA...ACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCTGTTGTGGAAAGAGTTaGGGGGCAGGATGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRACCGKS*GAGWSS Trigger: AGAGCTCCATCCTGCCCCCCAACTCTTTCCACAACA...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGTGTCTGTCCATGGCTaGTGGCAAAGGAGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAVSVHG*WQRRLL Trigger: CAAAAGCCTCCTTTGCCACCAGCCATGGACAGACAC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR TCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCCTGCCTCTGGTCGGGTaGTATAAGAGACATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRALPLVG*YKRHTT Trigger: AGTGGTATGTCTCTTATATCACCCGACCAGAGGCAG...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| 3UTR CAA 72 bp | TCCTCACATTCTCACTTCATGATCCTCTATGAACTGTaGCAGGCCCAAAGGAACAGGAACAGGCGACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSHFMILYEL*QAQRNRNRRPS Trigger: GGATGGTCGCCTGTTCCTGTTCCTTTGGGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCCTTGACTCAACTTACTaGGAAGTGGCATCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRALDSTY*EVASSA Trigger: AGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAG...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR TCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCTGTGCTTCTGTCTATTaGTGGAGCAGGCAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRACASVY*WSRQLC Trigger: GCAAAGTTGCCTGCTCCATCAATAGACAGAAGCACA...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCCCAGGAGATGGAGGCTaGGGCCTGTTTGGAACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVPGDGG*GLFGTG Trigger: GCCGGTTCCAAACAGGCCTCAGCCTCCATCTCCTGG...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GGAGATCTGAGGTGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCATCCCCTTCCATGCCTTaGAACTGGTGGCTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GDLRCFKGFKSQSEDKIASPSMP*NWWLPR Trigger: ACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGA...TGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCACCTCAGATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTACTAGATCTGGGGTTTGCGTGTaGAAATGCTCCTTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVFTKHCSSSQETFSTRSGVCV*KCSFSL Trigger: AAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGA...TCTAGTACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCCCATCGTCTTCTTCGTaGCTTTCTGTCTCCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERMSSHSHFMILYELLQAPSSSS*LSVSSR Trigger: TCTTGAGGAGACAGAAAGCCACGAAGAAGACGATGG...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGAGGCTTTTGTATCTTaGGTAAATGTTCCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAEAFVS*VNVPSP Trigger: TGGGGAGGGAACATTTACCCAAGATACAAAAGCCTC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTGAACGGATGTCCTCACCGGCATGTGGGCCAATaGGAATGTGTTCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLLFPSHHEVNGCPHRHVGQ*ECVLGA Trigger: AGCTCCAAGAACACATTCCCATTGGCCCACATGCCG...GTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCTGTAGTTCAGCTTCCTaGAATAGTCAGCGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERMSSHSHFMILYELLQACSSAS*NSQRGC Trigger: ACAACCTCGCTGACTATTTCAGGAAGCTGAACTACA...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAAGCTGCTGGGAGACCTTaGCAGTGGGAGGTCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NQHRPEISLYLLLSVISKAAGRP*QWEVGR Trigger: TCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGC...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGAGTGGCGAGTGATTCCTaGCTGTTGGCAGGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRVASDS*LLAGEG Trigger: TCCCTCCCCTGCCAACAGGCAGGAATCACTCGCCAC...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCGAGGCTTTTGTATCTTaGGTAAATGTTCCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERMSSHSHFMILYELLQAEAFVS*VNVPSP Trigger: TGGGGAGGGAACATTTACCCAAGATACAAAAGCCTC...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTGAACGGATGTCCTCACATGTGTTGGAGCTCATaGAAGGTAGTGACGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLLFPSHHEVNGCPHMCWSS*KVVTAV Trigger: CACAGCCGTCACTACCTTCCATGAGCTCCAACACAT...GTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GGAGATCTGAGGTGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCAATGGGAATGTGTTCTTaGAGCTGGGCTGGACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GDLRCFKGFKSQSEDKIAMGMCS*SWAGQI Trigger: GATCTGTCCAGCCCAGCTCCAAGAACACATTCCCAT...TGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCACCTCAGATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGACCTTGAGAGAAGTATaGCGGCAGGGAGGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLQHTCWANKAENQSRGLTLREV*RQGGTL Trigger: CAGAGTGCCTCCCTGCCGCCATACTTCTCTCAAGGT...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| 3UTR CAA 72 bp | GGCAGAAGATGCAAGACATGGAGGGAAATGCGCTTCTaGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRCKTWREMRF*SFLLFPSHHEV Trigger: CACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAAGCGCATTTCCCTCCATGTCTTGCATCTTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCTTCTGCCTTCACTTCTaGGAGGTGGCCTGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVFCLHF*EVACCL Trigger: CAGGCAACAGGCCACCTCTCAGAAGTGAAGGCAGAA...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGCCTCAGAGCAGCTTCTaGCTCTGGTCGGGTGATATA | + |
|
Preference number: 4 (lower is better) Translates to: VLQHTCWANKAENQSRGLPQSSF*LWSGDI Trigger: TATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGG...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GGAGATCTGAGGTGCTTCAAAGGGTTTAAAAGCCAATCTGAGGACAAGATAGCATTCCTCGAAGTCCAGTaGCCAACAAGTAGACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDLRCFKGFKSQSEDKIAFLEVQ*PTSRLD Trigger: GTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAA...TGCTATCTTGTCCTCAGATTGGCTTTTAAACCCTTTGAAGCACCTCAGATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGCAGCGTGTGTTAGTGTaGACTGGTATCTGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQHTCWANKAENQSRGLQRVLV*TGIWTL Trigger: GAGGGTCCAGATACCAGTGCACACTAACACACGCTG...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTCCTTTCTTTTGTTTCCCAGTCACCATGAAGTGAACGGATGTCCTCACGTCGGTCGATGTACATaGAGTTGGTGTTGTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLLFPSHHEVNGCPHVGRCT*SWCCGK Trigger: CTTTCCACAACACCAACTCCATGTACATCGACCGAC...GTGAGGACATCCGTTCACTTCATGGTGACTGGGAAACAAAAGAAAGGACAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAATCTCAGTGGGGGCACTaGAGGCTGCTGGGAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQHRPEISLYLLLSVISKSQWGH*RLLGDL Trigger: AAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGA...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | CAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAACTGTCTTCGTGGTTGGGATaGGGTGGAGACAGTGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHRPEISLYLLLSVISKLSSWLG*GGDSGE Trigger: CTCGCCACTGTCTCCACCCCATCCCAACCACGAAGA...CAGTTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | GACAGCAAAGCTGCATCACTGAACCTAAGCCTATTTTCTTCTTGTATGTTCAGAGTGTCTGTCCATGGCTaGTGGCAAAGGAGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKAASLNLSLFSSCMFRVSVHG*WQRRLL Trigger: CAAAAGCCTCCTTTGCCACCAGCCATGGACAGACAC...TCTGAACATACAAGAAGAAAATAGGCTTAGGTTCAGTGATGCAGCTTTGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCACCTTGAGAGAAGTATaGCGGCAGGGAGGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVTLREV*RQGGTL Trigger: CAGAGTGCCTCCCTGCCGCCATACTTCTCTCAAGGT...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCCCTCAGAGCAGCTTCTaGCTCTGGTCGGGTGATATA | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVPQSSF*LWSGDI Trigger: TATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGG...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCTTTCGTGTCTGTCCATaGCTGGTGGCAAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVFRVCP*LVAKEA Trigger: AGCCTCCTTTGCCACCAGCCATGGACAGACACGAAA...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCCGGCATGTGGGCCAATaGGAATGTGTTCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVRHVGQ*ECVLGA Trigger: AGCTCCAAGAACACATTCCCATTGGCCCACATGCCG...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGAGCAGCTTCTGCCTCTaGTCGGGTGATATAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQHTCWANKAENQSRGLSSFCL*SGDIRD Trigger: GTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCT...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTACTAGATCTCTTCGTTCTTGTTaGTATCTTGACTCAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVFTKHCSSSQETFSTRSLRSC*YLDSTY Trigger: GTAAGTTGAGTCAAGATATCAACAAGAACGAAGAGA...TCTAGTACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCAGGGAGGCACTCTGCTaGAAGCCAATGTTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVREALC*KPMLLS Trigger: AGAAAGCAACATTGGCTTTCAGCAGAGTGCCTCCCT...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCTGTTGTTTCCACTTCTaGTGGGCTCTTCGTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVCCFHF*WALRGW Trigger: CCAACCACGAAGAGCCCAGCAGAAGTGGAAACAACA...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCCTCCTCAAGAAACCGTaGAATCTGGGGTTTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVLLKKP*NLGFAC Trigger: ACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAG...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAAGAGCCTCCTCGTTGTTaGAGGGTGGAGGCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQHRPEISLYLLLSVISKEPPRC*RVEAHS Trigger: ACTATGAGCCTCCACCCTCCAACAACGAGGAGGCTC...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAAGTGGTTGGGATGGGGTaGAGACAGTGGCGAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQHRPEISLYLLLSVISKVVGMG*RQWRVI Trigger: AATCACTCGCCACTGTCTCCACCCCATCCCAACCAC...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGATTTCGTGTCTGTCCATaGCTGGTGGCAAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRFRVCP*LVAKEA Trigger: AGCCTCCTTTGCCACCAGCCATGGACAGACACGAAA...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCATGTGTTGGAGCTCATaGAAGGTAGTGACGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVMCWSS*KVVTAV Trigger: CACAGCCGTCACTACCTTCCATGAGCTCCAACACAT...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CCA 90 bp | GATGGATGTTCAAAATCTCATGTCTGCCATGCACTCTTAGACTTCAAATGTGAATTCTTGGAGCTGGGCTaGACAGATCTCGAAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGCSKSHVCHALLDFKCEFLELG*TDLEGN Trigger: ATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAA...TTCACATTTGAAGTCTAAGAGTGCATGGCAGACATGAGATTTTGAACATCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCATGGGAATGTGTTCTTaGAGCTGGGCTGGACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVMGMCS*SWAGQI Trigger: GATCTGTCCAGCCCAGCTCCAAGAACACATTCCCAT...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR TCA 90 bp | GATGGATGTTCAAAATCTCATGTCTGCCATGCACTCTTAGACTTCAAATGTGAACTTGACTCAACTTACTaGGAAGTGGCATCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGCSKSHVCHALLDFKCELDSTY*EVASSA Trigger: AGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAG...TTCACATTTGAAGTCTAAGAGTGCATGGCAGACATGAGATTTTGAACATCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCTCTGGGGTTTGCGTGTaGAAATGCTCCTTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWIISNESSSKTPTVDLVSGVCV*KCSFSL Trigger: AAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGA...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR TCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGACTGCCTCTGGTCGGGTaGTATAAGAGACATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRLPLVG*YKRHTT Trigger: AGTGGTATGTCTCTTATATCACCCGACCAGAGGCAG...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGTACTTTTTCAGCTTGCTCCACATTATTTCTGTACTGTATCAAGTACTGTTTCCACTTCTGCTaGGCTCTTCGTGGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFSTFSACSTLFLYCIKYCFHFC*ALRGWD Trigger: ATCCCAACCACGAAGAGCCCAGCAGAAGTGGAAACA...GTACTTGATACAGTACAGAAATAATGTGGAGCAAGCTGAAAAAGTACTGAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGATCTGTCCATGGCTGGTaGCAAAGGAGGCTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRSVHGW*QRRLLY Trigger: ATACAAAAGCCTCCTTTGCCACCAGCCATGGACAGA...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAATGTGCTTCTGTCTATTaGTGGAGCAGGCAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQHRPEISLYLLLSVISKCASVY*WSRQLC Trigger: GCAAAGTTGCCTGCTCCATCAATAGACAGAAGCACA...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGGTAGTCAATAATATCTaGTACAGACAGGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQHTCWANKAENQSRGLVVNNI*YRQEVL Trigger: GAGGACTTCCTGTCTGTATCAGATATTATTGACTAC...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGATGGAGCAGGCAACTTTaGTGTCTTGTTGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRWSRQL*CLVVST Trigger: AGTGGAAACAACAAGACAGCAAAGTTGCCTGCTCCA...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR GCA 90 bp | AATGACCAGTTTCAGTACTTTTTCAGCTTGCTCCACATTATTTCTGTACTGTATCCAGGGGAGGTTTTGTaGTTCTGTCTATTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDQFQYFFSLLHIISVLYPGEVL*FCLLME Trigger: CTCCATCAATAGACAGAAGCACAAAACCTCCCCTGG...ATACAGTACAGAAATAATGTGGAGCAAGCTGAAAAAGTACTGAAACTGGTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| 3UTR CAA 72 bp | GGGTTTAAAAGCCAATCTGAGGACAAGATAGCAGTTTaGCAACATACTTGTTGGGCTAATAAAGCAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFKSQSEDKIAV*QHTCWANKAEN Trigger: GTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAACTGCTATCTTGTCCTCAGATTGGCTTTTAAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| 3UTR CAA 72 bp | TCCACATTATTTCTGTACTGTATCAAGTACTGTATTTaGGGATGGATGTTCAAAATCTCATGTCTGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: STLFLYCIKYCI*GWMFKISCLPC Trigger: GCATGGCAGACATGAGATTTTGAACATCCATCCCAAAATACAGTACTTGATACAGTACAGAAATAATGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CCA 90 bp | AACGATAACTTTAATCCCAGGAAGTTATCCCCACATGCATTAATCTCATTACGACTGGATCATCATCATTaGGACTTTCATAGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDNFNPRKLSPHALISLRLDHHH*DFHSHL Trigger: AAGATGACTATGAAAGTCCCAATGATGATGATCCAG...TCGTAATGAGATTAATGCATGTGGGGATAACTTCCTGGGATTAAAGTTATCGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCGGCTGCTGGGAGACCTaGCCAGTGGGAGGTCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSGCWET*PVGGRS Trigger: CGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCC...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | GGAGGGAGGGCAGGTTTTGGTCTCAGTGGGGGCACTGGAGGCTGCTaGGAGACCTTGCCAGTGGGAGGTCGGTCGATGTACATGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRAGFGLSGGTGGC*ETLPVGGRSMYMEL Trigger: CAACTCCATGTACATCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGACCAAAACCTGCCCTCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTGGTGGCTTCCTCGTaGTCACGGGTCCGAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: APDWCAHSPRLLTGVHTALVASS*SRVRVF Trigger: AAAGACTCGGACCCGTGACAACGAGGAAGCCACCAG...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCCCTGTTGCCTGGACCTaGAGAGAAGTATGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSPVAWT*REVWRQ Trigger: CTGCCGCCATACTTCTCTCAAGGTCCAGGCAACAGG...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCGCCCAACAAGTAGACTaGACTTTCCTCCTGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSAQQVD*TFLLVA Trigger: CGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGC...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCCTGCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGAGGAGGCTTTTGTATCTaGGGTAAATGTTCCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPPAPDQGSIGQWWNLRRGGFCI*GKCSLP Trigger: GGGGAGGGAACATTTACCCAAGATACAAAAGCCTCC...TCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGCAGGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCGGAGGCTTTTGTATCTaGGGTAAATGTTCCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSGGFCI*GKCSLP Trigger: GGGGAGGGAACATTTACCCAAGATACAAAAGCCTCC...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCCTGCCCCCGACCAGGGCAGCATTGGGCAGTGGTGGAATCTTAGGAGACTCGAAGGGAATGTGTaGGAGCTCATGGAAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: WPPAPDQGSIGQWWNLRRLEGNV*ELMEGS Trigger: ACTACCTTCCATGAGCTCCAACACATTCCCTTCGAG...TCTCCTAAGATTCCACCACTGCCCAATGCTGCCCTGGTCGGGGGCAGGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCAATGGGAATGTGTTCTaGGAGCTGGGCTGGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSNGNVF*ELGWTD Trigger: ATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATT...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTAGGCTCCTTGTGCTTCTGTCTATaGATGGAGCAGGCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WCAHSPRLLTGVHTALGSLCFCL*MEQATL Trigger: CAAAGTTGCCTGCTCCATCAATAGACAGAAGCACAA...GGAGCCTAGGGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCCTCCTGGTAGCGGATTaGGATGTTGTAAACTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: APDWCAHSPRLLTGVHTALLVAD*DVVNFV Trigger: GACAAAGTTTACAACATCCAAATCCGCTACCAGGAG...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS TCA 90 bp | GTATGGCGGCAGGGAGGCACTCTGCTGAAAGCCAATGTTGCTTTCTaGGAAGGCTCCCGGCATGTGGGCCAATGGGAATGTGTTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VWRQGGTLLKANVAF*EGSRHVGQWECVLG Trigger: TCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGCCTTCTCAGAAAGCAACATTGGCTTTCAGCAGAGTGCCTCCCTGCCGCCATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS TCA 90 bp | GAGGCCTGTTTGGAACCGGCAAGGGTAAGTTTCTGCCTTCACTTCTaGGAGGTGGCCTGTTGCCTGGACCTTGAGAGAAGTATGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EACLEPARVSFCLHF*EVACCLDLERSMAA Trigger: TGCCGCCATACTTCTCTCAAGGTCCAGGCAACAGGCCACCTCTCAGAAGTGAAGGCAGAAACTTACCCTTGCCGGTTCCAAACAGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | GCTCCCGGCATGTGGGCCAATGGGAATGTGTTCTTGGAGCTGGGCTaGACAGATCTCGAAGGGAATGTGTTGGAGCTCATGGAAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: APGMWANGNVFLELG*TDLEGNVLELMEGS Trigger: ACTACCTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | AGAAGGCTCCCGGCATGTGGGCCAATGGGAATGTGTTCTTGGAGCTaGGCTGGACAGATCTCGAAGGGAATGTGTTGGAGCTCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLPACGPMGMCSWS*AGQISKGMCWSSWK Trigger: CTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | TGGAGCTGGGCTGGACAGATCTCGAAGGGAATGTGTTGGAGCTCATaGAAGGTAGTGACGGCTGTGGCAAAGGTCTCTGATGCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSWAGQISKGMCWSS*KVVTAVAKVSDAHH Trigger: ATGATGTGCATCAGAGACCTTTGCCACAGCCGTCACTACCTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTGACTGGTGTGCACACAGCCCTAGGCTCCTGACTGGTGTGCACACGGCCGTTCTTGTTGATATCTaGACTCAACTTACTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: APDWCAHSPRLLTGVHTAVLVDI*TQLTEK Trigger: CTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAAC...GGCCGTGTGCACACCAGTCAGGAGCCTAGGGCTGTGTGCACACCAGTCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GACTTAGTCATGGGTAGTACGTTTCTTCTTTCCTTCCTCCTTCAACGGAGGGCCGAGGCTGAGGCCTGTTaGGAACCGGCAAGGGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLVMGSTFLLSFLLQRRAEAEAC*EPARVS Trigger: ACTTACCCTTGCCGGTTCCAAACAGGCCTCAGCCTC...GGCCCTCCGTTGAAGGAGGAAGGAAAGAAGAAACGTACTACCCATGACTAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | ATGTGTTCTTGGAGCTGGGCTGGACAGATCTCGAAGGGAATGTGTTaGAGCTCATGGAAGGTAGTGACGGCTGTGGCAAAGGTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MCSWSWAGQISKGMC*SSWKVVTAVAKVSD Trigger: ATCAGAGACCTTTGCCACAGCCGTCACTACCTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTACTAGACCTGTTGCCTGGACCTaGAGAGAAGTATGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VCVFTKHCSSSQETFSTRPVAWT*REVWRQ Trigger: CTGCCGCCATACTTCTCTCAAGGTCCAGGCAACAGG...TCTAGTACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTACTAGAGAGGCTGAGGCCTGTTaGGAACCGGCAAGGGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VCVFTKHCSSSQETFSTREAEAC*EPARVS Trigger: ACTTACCCTTGCCGGTTCCAAACAGGCCTCAGCCTC...TCTAGTACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS CCA 90 bp | ATCATTCTCTCTTCTGTCTGGTCCCCTTCCATGCCTTGGAACTGGTaGCTTCCTCGTTGTCACGGGTCCGAGTCTTTCATTTCTTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IILSSVWSPSMPWNW*LPRCHGSESFISFV Trigger: CACGAAAGAAATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGAGAGAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGTAATGGGAATGTGTTCTaGGAGCTGGGCTGGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRVCVFTKHCSSSQETFSNGNVF*ELGWTD Trigger: ATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATT...ACTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS TCA 90 bp | GGTATTTCTTCACAGCCTTCTCACAGTCCCTGTAGTTCAGCTTCCTaGAATAGTCAGCGAGGTTGTCTGAGTTCCAGGCTAGGACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GISSQPSHSPCSSAS*NSQRGCLSSRLGPL Trigger: CAGAGGTCCTAGCCTGGAACTCAGACAACCTCGCTGACTATTTCAGGAAGCTGAACTACAGGGACTGTGAGAAGGCTGTGAAGAAATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS TCA 90 bp | GTGTTGGAGCTCATGGAAGGTAGTGACGGCTGTGGCAAAGGTCTCTaGTGCACATCATCTTCATCATTCTCTCTTCTGTCTGGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLELMEGSDGCGKGL*CTSSSSFSLLSGPL Trigger: AAGGGGACCAGACAGAAGAGAGAATGATGAAGATGATGTGCATCAGAGACCTTTGCCACAGCCGTCACTACCTTCCATGAGCTCCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 90 bp | TTCATCATTCTCTCTTCTGTCTGGTCCCCTTCCATGCCTTGGAACTaGTGGCTTCCTCGTTGTCACGGGTCCGAGTCTTTCATTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIILSSVWSPSMPWN*WLPRCHGSESFISF Trigger: GAAAGAAATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGAGAGAATGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GAACGGATGTCCTCACATTCTCACTTCATGATCCTCTATGAACTGTTGCAGGCCGCCCAACAAGTAGACTaGACTTTCCTCCTGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ERMSSHSHFMILYELLQAAQQVD*TFLLVA Trigger: CGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGC...GGCCTGCAACAGTTCATAGAGGATCATGAAGTGAGAATGTGAGGACATCCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS CCA 90 bp | TCGTTGTCACGGGTCCGAGTCTTTCATTTCTTTCGTGTCTGTCCATaGCTGGTGGCAAAGGAGGCTTTTGTATCTTGGGTAAATGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSRVRVFHFFRVCP*LVAKEAFVSWVNVP Trigger: GGGAACATTTACCCAAGATACAAAAGCCTCCTTTGCCACCAGCCATGGACAGACACGAAAGAAATGAAAGACTCGGACCCGTGACAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | AATGACCAGTTTCAGTACTTTTTCAGCTTGCTCCACATTATTTCTGTACTGTATGGCTGCTGGGAGACCTaGCCAGTGGGAGGTCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NDQFQYFFSLLHIISVLYGCWET*PVGGRS Trigger: CGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCC...ATACAGTACAGAAATAATGTGGAGCAAGCTGAAAAAGTACTGAAACTGGTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS CCA 90 bp | TCGTCTTCTTCGTGGCTTTCTGTCTCCTCAAGAAACCGTGGAATCTaGGGTTTGCGTGTGAAAATGCTCCTTCTCTCTTCGTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSWLSVSSRNRGI*GLRVKMLLLSSFLL Trigger: CAACAAGAACGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAGACAGAAAGCCACGAAGAAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGCTGGTGGCTTCCTCGTaGTCACGGGTCCGAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLQHTCWANKAENQSRGLLVASS*SRVRVF Trigger: AAAGACTCGGACCCGTGACAACGAGGAAGCCACCAG...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS TCA 90 bp | CATCCTGGTTTATCTTCCTCAGAGCAGCTTCTGCCTCTGGTCGGGTaGTATAAGAGACATACCACTCTTCATCTAAGGGTGTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HPGLSSSEQLLPLVG*YKRHTTLHLRVSLL Trigger: AAGAAGAGACACCCTTAGATGAAGAGTGGTATGTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGGAAGATAAACCAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCGTGTGTGTGTGTTTACCAAGCATTGCTCGTCTTCCCAGGAGACCTTCAGGTTCTTGTTGATATCTaGACTCAACTTACTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CACVCVYQALLVFPGDLQVLVDI*TQLTEK Trigger: CTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAAC...CTGAAGGTCTCCTGGGAAGACGAGCAATGCTTGGTAAACACACACACACGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS TCA 90 bp | ATTCAACTGCATAGTTGCTATACAGTATGGGATCTGGGCAAAGAGTaGAGACTAAAGTCCTTACCTCTTTTCCTCGAAGTCCAGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IQLHSCYTVWDLGKE*RLKSLPLFLEVQCP Trigger: TGGGCACTGGACTTCGAGGAAAAGAGGTAAGGACTTTAGTCTTCACTCTTTGCCCAGATCCCATACTGTATAGCAACTATGCAGTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCAACATACTTGTTGGGCTAATAAAGCAGAAAACCAGAGCAGAGGTTTGGGTCCAGGGGAGGTTTaGTGCTTCTGTCTATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLQHTCWANKAENQSRGLGPGEV*CFCLLM Trigger: CATCAATAGACAGAAGCACAAAACCTCCCCTGGACC...CAAACCTCTGCTCTGGTTTTCTGCTTTATTAGCCCAACAAGTATGTTGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS TCA 90 bp | TTGCGTGTGAAAATGCTCCTTCTCTCTTCGTTCTTGTTGATATCTTaGCTCAACTTACTGAGAAGTGGCATCCTCAGCTTAGGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRVKMLLLSSFLLIS*LNLLRSGILSLGNF Trigger: GAAGTTCCCTAAGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAACGAAGAGAGAAGGAGCATTTTCACACGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCGGTCCAGGGGAGGTTTaGTGCTTCTGTCTATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CWIISNESSSKTPTVDLVGPGEV*CFCLLM Trigger: CATCAATAGACAGAAGCACAAAACCTCCCCTGGACC...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGATTATTTCGAATGAAAGTTCAAGCAAGACTCCTACAGTGGACTTAGTCCTCGAAGGGAATGTGTaGGAGCTCATGGAAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWIISNESSSKTPTVDLVLEGNV*ELMEGS Trigger: ACTACCTTCCATGAGCTCCAACACATTCCCTTCGAG...GACTAAGTCCACTGTAGGAGTCTTGCTTGAACTTTCATTCGAAATAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
||
| CDS-3UTR CAA 90 bp | AACCAACATAGGCCAGAAATCTCTCTCTACCTTTTGTTAAGTGTGATTTCAAAAGGCAACTTTGCTGTCTaGTTGTTTCCACTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQHRPEISLYLLLSVISKGNFAV*LFPLLL Trigger: CAGCAGAAGTGGAAACAACAAGACAGCAAAGTTGCC...TTTTGAAATCACACTTAACAAAAGGTAGAGAGAGATTTCTGGCCTATGTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | TACGAAAGGGAACACATAAAAACACACCCTGTAAAACCAAATAAGAAACGATGGTTGTGCTTCTGTCTATaGATGGAGCAGGCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YEREHIKTHPVKPNKKRWLCFCL*MEQATL Trigger: CAAAGTTGCCTGCTCCATCAATAGACAGAAGCACAA...CCATCGTTTCTTATTTGGTTTTACAGGGTGTGTTTTTATGTGTTCCCTTTCGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGTACTTTTTCAGCTTGCTCCACATTATTTCTGTACTGTATCAAGTACCTCCTGGTAGCGGATTaGGATGTTGTAAACTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSTFSACSTLFLYCIKYLLVAD*DVVNFV Trigger: GACAAAGTTTACAACATCCAAATCCGCTACCAGGAG...GTACTTGATACAGTACAGAAATAATGTGGAGCAAGCTGAAAAAGTACTGAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
||
| CDS GCA 72 bp | AGGGCAGGTTTTGGTCTCAGTGGGGGCACTGGAGGCTaGTGGGAGACCTTGCCAGTGGGAGGTCGGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: RAGFGLSGGTGG*WETLPVGGRSM Trigger: CATCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGACCAAAACCTGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | GCAGGTTTTGGTCTCAGTGGGGGCACTGGAGGCTGCTaGGAGACCTTGCCAGTGGGAGGTCGGTCGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AGFGLSGGTGGC*ETLPVGGRSMY Trigger: GTACATCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGACCAAAACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | GGGGCAGGATGGAGCTCTGCAGAGCCTCCTCGTTGTTaGAGGGTGGAGGCTCATAGTCAGCAGCATCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGWSSAEPPRC*RVEAHSQQHRP Trigger: TGGACGATGCTGCTGACTATGAGCCTCCACCCTCCAACAACGAGGAGGCTCTGCAGAGCTCCATCCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 90 bp | GCAGGTTTTGGTCTCAGTGGGGGCACTGGAGGCTGCTGGGAGACCTaGCCAGTGGGAGGTCGGTCGATGTACATGGAGTTGGTGTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGFGLSGGTGGCWET*PVGGRSMYMELVLW Trigger: CCACAACACCAACTCCATGTACATCGACCGACCTCCCACTGGCAAGGTCTCCCAGCAGCCTCCAGTGCCCCCACTGAGACCAAAACCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | CTCTCTTCTGTCTGGTCCCCTTCCATGCCTTGGAACTaGTGGCTTCCTCGTTGTCACGGGTCCGAGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSVWSPSMPWN*WLPRCHGSESF Trigger: GAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | CCGGCATGTGGGCCAATGGGAATGTGTTCTTGGAGCTaGGCTGGACAGATCTCGAAGGGAATGTGTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PACGPMGMCSWS*AGQISKGMCWS Trigger: GCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | AGGCTCCCGGCATGTGGGCCAATGGGAATGTGTTCTTaGAGCTGGGCTGGACAGATCTCGAAGGGAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLPACGPMGMCS*SWAGQISKGMC Trigger: ACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | GAGAGGTGGCCTGTTGCCTGGACCTTGAGAGAAGTATaGCGGCAGGGAGGCACTCTGCTGAAAGCCAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: ERWPVAWTLREV*RQGGTLLKANV Trigger: AACATTGGCTTTCAGCAGAGTGCCTCCCTGCCGCCATACTTCTCTCAAGGTCCAGGCAACAGGCCACCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 72 bp | AAGGCTCCCGGCATGTGGGCCAATGGGAATGTGTTCTaGGAGCTGGGCTGGACAGATCTCGAAGGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAPGMWANGNVF*ELGWTDLEGNV Trigger: CACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | AAGCCAATGTTGCTTTCTGAGAAGGCTCCCGGCATGTaGGCCAATGGGAATGTGTTCTTGGAGCTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KPMLLSEKAPGM*ANGNVFLELGW Trigger: CCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACATGCCGGGAGCCTTCTCAGAAAGCAACATTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 72 bp | GGTCAAGAGGGGCCAGTGAGCGGTCCAGGGGAGGTTTaGTGCTTCTGTCTATTGATGGAGCAGGCAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GQEGPVSGPGEV*CFCLLMEQATL Trigger: CAAAGTTGCCTGCTCCATCAATAGACAGAAGCACAAAACCTCCCCTGGACCGCTCACTGGCCCCTCTTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 72 bp | CATCATTCTCTCTTCTGTCTGGTCCCCTTCCATGCCTaGGAACTGGTGGCTTCCTCGTTGTCACGGGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HHSLFCLVPFHA*ELVASSLSRVR Trigger: TCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGAGAGAATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | TCTTCTGTCTGGTCCCCTTCCATGCCTTGGAACTGGTaGCTTCCTCGTTGTCACGGGTCCGAGTCTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSVWSPSMPWNW*LPRCHGSESFI Trigger: AATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 72 bp | GTCCCCTTCCATGCCTTGGAACTGGTGGCTTCCTCGTaGTCACGGGTCCGAGTCTTTCATTTCTTTCGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPFHALELVASS*SRVRVFHFFRV Trigger: GACACGAAAGAAATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 72 bp | TTGGAGCTGGGCTGGACAGATCTCGAAGGGAATGTGTaGGAGCTCATGGAAGGTAGTGACGGCTGTGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LELGWTDLEGNV*ELMEGSDGCGK Trigger: TTTGCCACAGCCGTCACTACCTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 90 bp | TTCTGTCTGGTCCCCTTCCATGCCTTGGAACTGGTGGCTTCCTCGTaGTCACGGGTCCGAGTCTTTCATTTCTTTCGTGTCTGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: FCLVPFHALELVASS*SRVRVFHFFRVCPW Trigger: CCATGGACAGACACGAAAGAAATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS TCA 72 bp | TTGGAACCGGCAAGGGTAAGTTTCTGCCTTCACTTCTaGGAGGTGGCCTGTTGCCTGGACCTTGAGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEPARVSFCLHF*EVACCLDLERS Trigger: ACTTCTCTCAAGGTCCAGGCAACAGGCCACCTCTCAGAAGTGAAGGCAGAAACTTACCCTTGCCGGTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | GCTGGACAGATCTCGAAGGGAATGTGTTGGAGCTCATaGAAGGTAGTGACGGCTGTGGCAAAGGTCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AGQISKGMCWSS*KVVTAVAKVSD Trigger: ATCAGAGACCTTTGCCACAGCCGTCACTACCTTCCATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | ATGTGGGCCAATGGGAATGTGTTCTTGGAGCTGGGCTaGACAGATCTCGAAGGGAATGTGTTGGAGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: MWANGNVFLELG*TDLEGNVLELM Trigger: CATGAGCTCCAACACATTCCCTTCGAGATCTGTCCAGCCCAGCTCCAAGAACACATTCCCATTGGCCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CAA 90 bp | CATCATCTTCATCATTCTCTCTTCTGTCTGGTCCCCTTCCATGCCTaGGAACTGGTGGCTTCCTCGTTGTCACGGGTCCGAGTCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HHLHHSLFCLVPFHA*ELVASSLSRVRVFH Trigger: ATGAAAGACTCGGACCCGTGACAACGAGGAAGCCACCAGTTCCAAGGCATGGAAGGGGACCAGACAGAAGAGAGAATGATGAAGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS TCA 72 bp | AGGGCTTATCAGAAAATGGTGGTTTCTTTCCTAGTATaGAGGGCTCTCGGTCAAGAGGGGCCAGTGAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RAYQKMVVSFLV*RALGQEGPVSG Trigger: ACCGCTCACTGGCCCCTCTTGACCGAGAGCCCTTCATACTAGGAAAGAAACCACCATTTTCTGATAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS GCA 72 bp | GGTGCCATCCTGGTTTATCTTCCTCAGAGCAGCTTCTaGCTCTGGTCGGGTGATATAAGAGACATACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: GAILVYLPQSSF*LWSGDIRDIPL Trigger: GAGTGGTATGTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGGAAGATAAACCAGGATGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS TCA 72 bp | TCACAGCCTTCTCACAGTCCCTGTAGTTCAGCTTCCTaGAATAGTCAGCGAGGTTGTCTGAGTTCCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SQPSHSPCSSAS*NSQRGCLSSRL Trigger: TAGCCTGGAACTCAGACAACCTCGCTGACTATTTCAGGAAGCTGAACTACAGGGACTGTGAGAAGGCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
||
| CDS CCA 72 bp | TCGTGGCTTTCTGTCTCCTCAAGAAACCGTGGAATCTaGGGTTTGCGTGTGAAAATGCTCCTTCTCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SWLSVSSRNRGI*GLRVKMLLLSS Trigger: CGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAGACAGAAAGCCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CCA 72 bp | CGGGTCCGAGTCTTTCATTTCTTTCGTGTCTGTCCATaGCTGGTGGCAAAGGAGGCTTTTGTATCTTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: RVRVFHFFRVCP*LVAKEAFVSWV Trigger: TACCCAAGATACAAAAGCCTCCTTTGCCACCAGCCATGGACAGACACGAAAGAAATGAAAGACTCGGACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 72 bp | GTGAGCGGTCCAGGGGAGGTTTTGTGCTTCTGTCTATaGATGGAGCAGGCAACTTTGCTGTCTTGTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VSGPGEVLCFCL*MEQATLLSCCF Trigger: GAAACAACAAGACAGCAAAGTTGCCTGCTCCATCAATAGACAGAAGCACAAAACCTCCCCTGGACCGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS GCA 72 bp | ATACAGACAGGAAGTCCTCTTTTCCTCGAAGTCCAGTaGCCAACAAGTAGACTTGACTTTCCTCCTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: IQTGSPLFLEVQ*PTSRLDFPPGS Trigger: GCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAAAAGAGGACTTCCTGTCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS CAA 72 bp | CTTCTGTCTATTGATGGAGCAGGCAACTTTGCTGTCTaGTTGTTTCCACTTCTGCTGGGCTCTTCGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLSIDGAGNFAV*LFPLLLGSSWL Trigger: CAACCACGAAGAGCCCAGCAGAAGTGGAAACAACAAGACAGCAAAGTTGCCTGCTCCATCAATAGACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 90 bp | CAGGAAGTCCTCTTTTCCTCGAAGTCCAGTGCCCAACAAGTAGACTaGACTTTCCTCCTGGTAGCGGATTTGGATGTTGTAAACTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: QEVLFSSKSSAQQVD*TFLLVADLDVVNFV Trigger: GACAAAGTTTACAACATCCAAATCCGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAAAAGAGGACTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052413.12 |
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| CDS TCA 72 bp | CTCATGGAAGGTAGTGACGGCTGTGGCAAAGGTCTCTaGTGCACATCATCTTCATCATTCTCTCTTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LMEGSDGCGKGL*CTSSSSFSLLS Trigger: AGACAGAAGAGAGAATGATGAAGATGATGTGCATCAGAGACCTTTGCCACAGCCGTCACTACCTTCCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS TCA 72 bp | TTATCTTCCTCAGAGCAGCTTCTGCCTCTGGTCGGGTaGTATAAGAGACATACCACTCTTCATCTAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSSSEQLLPLVG*YKRHTTLHLRV Trigger: CACCCTTAGATGAAGAGTGGTATGTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGGAAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS GCA 72 bp | AGACTAAAGTCCTTACCTCTTTTCCTCGAAGTCCAGTaGCCAACAAGTAGACTTGACTTTCCTCCTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RLKSLPLFLEVQ*PTSRLDFPPGS Trigger: GCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAAAAGAGGTAAGGACTTTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS CCA 72 bp | ATCCTGGTTTATCTTCCTCAGAGCAGCTTCTGCCTCTaGTCGGGTGATATAAGAGACATACCACTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ILVYLPQSSFCL*SGDIRDIPLFI Trigger: GATGAAGAGTGGTATGTCTCTTATATCACCCGACCAGAGGCAGAAGCTGCTCTGAGGAAGATAAACCAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 72 bp | CTTTCTGTCTCCTCAAGAAACCGTGGAATCTGGGGTTaGCGTGTGAAAATGCTCCTTCTCTCTTCGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSVSSRNRGIWG*RVKMLLLSSFL Trigger: CAAGAACGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAGACAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 72 bp | CTCTTTTCCTCGAAGTCCAGTGCCCAACAAGTAGACTaGACTTTCCTCCTGGTAGCGGATTTGGATGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LFSSKSSAQQVD*TFLLVADLDVV Trigger: TACAACATCCAAATCCGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 90 bp | TCTTCGTGGCTTTCTGTCTCCTCAAGAAACCGTGGAATCTGGGGTTaGCGTGTGAAAATGCTCCTTCTCTCTTCGTTCTTGTTGATATCT | + |
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Preference number: 6 (lower is better) Translates to: SSWLSVSSRNRGIWG*RVKMLLLSSFLLIS Trigger: AGATATCAACAAGAACGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAGATTCCACGGTTTCTTGAGGAGACAGAAAGCCACGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 90 bp | AGTCCTTACCTCTTTTCCTCGAAGTCCAGTGCCCAACAAGTAGACTaGACTTTCCTCCTGGTAGCGGATTTGGATGTTGTAAACTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SPYLFSSKSSAQQVD*TFLLVADLDVVNFV Trigger: GACAAAGTTTACAACATCCAAATCCGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGACTTCGAGGAAAAGAGGTAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS CCA 72 bp | ATTAGGGGACTCATAGTCACCATCGTCCTCCCCATCTaGATCATCATCATTGGGACTTTCATAGTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: IRGLIVTIVLPI*IIIIGTFIVIF Trigger: GAAGATGACTATGAAAGTCCCAATGATGATGATCCAGATGGGGAGGACGATGGTGACTATGAGTCCCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 72 bp | ACTTTGTCTTTGTACAGCACCATGAGGACATACGGATaGTTCGCTGTCTTCTTAGAGCTGTCTCTAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TLSLYSTMRTYG*FAVFLELSLTR Trigger: CCTGGTTAGAGACAGCTCTAAGAAGACAGCGAACAATCCGTATGTCCTCATGGTGCTGTACAAAGACAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 90 bp | TCCAGTGCCCAACAAGTAGACTTGACTTTCCTCCTGGTAGCGGATTaGGATGTTGTAAACTTTGTCTTTGTACAGCACCATGAGGACATA | + |
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Preference number: 6 (lower is better) Translates to: SSAQQVDLTFLLVAD*DVVNFVFVQHHEDI Trigger: TATGTCCTCATGGTGCTGTACAAAGACAAAGTTTACAACATCCAAATCCGCTACCAGGAGGAAAGTCAAGTCTACTTGTTGGGCACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS TCA 72 bp | CATAGTTGCTATACAGTATGGGATCTGGGCAAAGAGTaGAGACTAAAGTCCTTACCTCTTTTCCTCGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HSCYTVWDLGKE*RLKSLPLFLEV Trigger: GACTTCGAGGAAAAGAGGTAAGGACTTTAGTCTTCACTCTTTGCCCAGATCCCATACTGTATAGCAACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109329.9 |
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| CDS CAA 90 bp | TTTGCGTGTGAAAATGCTCCTTCTCTCTTCGTTCTTGTTGATATCTaGACTCAACTTACTGAGAAGTGGCATCCTCAGCTTAGGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: FACENAPSLFVLVDI*TQLTEKWHPQLREL Trigger: AAGTTCCCTAAGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAACGAAGAGAGAAGGAGCATTTTCACACGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS CAA 72 bp | GAAAATGCTCCTTCTCTCTTCGTTCTTGTTGATATCTaGACTCAACTTACTGAGAAGTGGCATCCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ENAPSLFVLVDI*TQLTEKWHPQL Trigger: AAGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAACGAAGAGAGAAGGAGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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| CDS TCA 72 bp | AAAATGCTCCTTCTCTCTTCGTTCTTGTTGATATCTTaGCTCAACTTACTGAGAAGTGGCATCCTCAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: KMLLLSSFLLIS*LNLLRSGILSL Trigger: TAAGCTGAGGATGCCACTTCTCAGTAAGTTGAGTCAAGATATCAACAAGAACGAAGAGAGAAGGAGCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052413.12 ENSMUST00000109329.9 |
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