Pregenerated sensors for LCP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021998Ensembl transcript IDs: ENSMUST00000122840.8, ENSMUST00000124499.8, ENSMUST00000125833.8, ENSMUST00000131802.2, ENSMUST00000134114.8, ENSMUST00000143539.8, ENSMUST00000145303.8
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAAACACCTTGCGTCTGATGCAGCGGGAATACTGCTTGGGAGCTaGAAACAGTCATCTATTGGTTTCCTGAGCCTACTGTCAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: AKHLASDAAGILLGS*KQSSIGFLSLLSGE Trigger: CTCCCCTGACAGTAGGCTCAGGAAACCAATAGATGACTGTTTCCAGCTCCCAAGCAGTATTCCCGCTGCATCAGACGCAAGGTGTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 90 bp | ACAGTCATCTATTGGTTTCCTGAGCCTACTGTCAGGGGAGGGAGCTaGGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TVIYWFPEPTVRGGS*EALHLHWFGRQQSS Trigger: GGAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCCCTGACAGTAGGCTCAGGAAACCAATAGATGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 90 bp | CCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTaGGGCTTGGTAATATGGCTGGGCAGCAATCAGATATGCCCATGT | + |
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Preference number: 1 (lower is better) Translates to: PGILGWQKASVVPAK*GLVIWLGSNQICPC Trigger: ACATGGGCATATCTGATTGCTGCCCAGCCATATTACCAAGCCTCACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 90 bp | TGCTATGGCGGTAAGCCTTTCACTAATGCAGAGGGAGTCTTGCTTTaGTTCACGAAGCTCTGTGGCTTTTTAGCTTTTGGTAGGTTCTCG | + |
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Preference number: 1 (lower is better) Translates to: CYGGKPFTNAEGVLL*FTKLCGFLAFGRFS Trigger: CGAGAACCTACCAAAAGCTAAAAAGCCACAGAGCTTCGTGAACCAAAGCAAGACTCCCTCTGCATTAGTGAAAGGCTTACCGCCATAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 90 bp | ACTCTTTATTACACTTTCCTTGAGTCCCCAGTGTTGCAGTCTCCCTaGGAGACTCTTGAGACCTTGACTGATTTGTCAGATACTCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: TLYYTFLESPVLQSP*ETLETLTDLSDTPV Trigger: TACTGGAGTATCTGACAAATCAGTCAAGGTCTCAAGAGTCTCTCAGGGAGACTGCAACACTGGGGACTCAAGGAAAGTGTAATAAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 90 bp | TTTTACATTAAGGCAATAATAATATCCTTCCTTCACGGAGGCAGATaGACAAACATCATCCAAGGCTACACGAAGTTCAGACTAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: FYIKAIIISFLHGGR*TNIIQGYTKFRLKS Trigger: TGACTTTAGTCTGAACTTCGTGTAGCCTTGGATGATGTTTGTCCATCTGCCTCCGTGAAGGAAGGATATTATTATTGCCTTAATGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACTGGTCCTCTGCATCCTaGGAGCACCATGTGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LSQVGLKALRKVDALWSHWSSAS*EHHVLT Trigger: GGTCAGCACATGGTGCTCCCAGGATGCAGAGGACCA...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCTGGTCCTCTGCATCCTaGGAGCACCATGTGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: GRELRSPAFALVWKTTKFWSSAS*EHHVLT Trigger: GGTCAGCACATGGTGCTCCCAGGATGCAGAGGACCA...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACGTGTTGCAGTCTCCCTaGGAGACTCTTGAGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: LSQVGLKALRKVDALWSHVLQSP*ETLETL Trigger: CAAGGTCTCAAGAGTCTCTCAGGGAGACTGCAACAC...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCTCTGTGGTCCCACCATaGTGCCCCCTAGTGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GRELRSPAFALVWKTTKFSVVPP*CPLVVL Trigger: TAGAACCACTAGGGGGCAGCATGGTGGGACCACAGA...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGGTGGTCCCACCATGCTaGCCCCTAGTGGTTCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVVVPPC*PLVVLL Trigger: GAGTAGAACCACTAGGGGGCAGCATGGTGGGACCAC...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGAAGGTAGATGCTCTGTaGTCCCACCATGCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVKVDAL*SHHAAP Trigger: GGGGGCAGCATGGTGGGACCACAGAGCATCTACCTT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACAGACTCTTGAGACCTTaGCTGATTTGTCAGATACTC | + |
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Preference number: 2 (lower is better) Translates to: LSQVGLKALRKVDALWSHRLLRP*LICQIL Trigger: GAGTATCTGACAAATCAGTCAAGGTCTCAAGAGTCT...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR TCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGTGTAGTTTATATCCTTaGCTACCAGTGAAAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: YGSEGNGANSQTHRETDWCSLYP*LPVKAW Trigger: CCATGCTTTCACTGGTAGTCAAGGATATAAACTACA...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGCAAGGTTCAGGACTTTaGAATGGCTTGAATGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVQGSGL*NGLNGP Trigger: AGGACCATTCAAGCCATTGCAAAGTCCTGAACCTTG...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGTGGTCCCACCATGCTaGCCCCTAGTGGTTCTACTC | + |
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Preference number: 2 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVVVPPC*PLVVLL Trigger: GAGTAGAACCACTAGGGGGCAGCATGGTGGGACCAC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCGGCAGCAATCAGATATaGCCATGTCTAAAAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GRELRSPAFALVWKTTKFGSNQI*PCLKAN Trigger: ATTTGCTTTTAGACATGGGCATATCTGATTGCTGCC...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGTTCAGGACTTTGCAATaGCTTGAATGGTCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVFRTLQ*LEWSSA Trigger: TGCAGAGGACCATTCAAGCCATTGCAAAGTCCTGAA...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCAAGGTTCAGGACTTTaGAATGGCTTGAATGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMQGSGL*NGLNGP Trigger: AGGACCATTCAAGCCATTGCAAAGTCCTGAACCTTG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTACTCAGAAAGGTAGATaGTCTGTGGTCCCACCATGC | + |
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Preference number: 2 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVTQKGR*SVVPPC Trigger: GCATGGTGGGACCACAGAGCATCTACCTTTCTGAGT...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTTTGCAATGGCTTGAATaGTCCTCTGCATCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVLQWLE*SSASWE Trigger: CTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAA...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGATAGCAGAAGCTACTTaGCTGAAGAAATGTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVIAEAT*LKKCVN Trigger: ATTCACACATTTCTTCAGCCAAGTAGCTTCTGCTAT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGAGACTCTTGAGACCTTaGCTGATTTGTCAGATACTC | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMRLLRP*LICQIL Trigger: GAGTATCTGACAAATCAGTCAAGGTCTCAAGAGTCT...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGGGTTCTCGTGGAAATTaGTTATCTAGTGGGAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMGSRGN*LSSGSY Trigger: ATAGCTCCCACTAGATAAGCAATTTCCACGAGAACC...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCCAGGAATTTTAGGGTaGCAAAAAGCTTCCGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMPGILG*QKASVV Trigger: TACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGTGTAGTTTATATCCTTaGCTACCAGTGAAAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMCSLYP*LPVKAW Trigger: CCATGCTTTCACTGGTAGTCAAGGATATAAACTACA...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGAAGTTGAGCAGGATTaGTTTCAACAATCGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVEVEQD*FQQSSG Trigger: GCCTGACGATTGTTGAAAGCAATCCTGCTCAACTTC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGGGCAGCAATCAGATATaGCCATGTCTAAAAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMGSNQI*PCLKAN Trigger: ATTTGCTTTTAGACATGGGCATATCTGATTGCTGCC...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 72 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTaGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: RTLQWLEWSSAS*EHHVLTPSGLS Trigger: AGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 72 bp | TGCTTGGGAGCTGGAAACAGTCATCTATTGGTTTCCTaGGCCTACTGTCAGGGGAGGGAGCTGAGAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: CLGAGNSHLLVS*AYCQGRELRSP Trigger: AGGGCTTCTCAGCTCCCTCCCCTGACAGTAGGCTCAGGAAACCAATAGATGACTGTTTCCAGCTCCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR GCA 72 bp | CTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATaGTCTGTGGTCCCACCATGCTGCCCCCTAGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LTSGVKGTQKGR*SVVPPCCPLVV Trigger: AACCACTAGGGGGCAGCATGGTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 72 bp | ATGTCTCCAAGGTTCAGGACTTTGCAATGGCTTGAATaGTCCTCTGCATCCTGGGAGCACCATGTGCTGACC | + |
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Preference number: 3 (lower is better) Translates to: MSPRFRTLQWLE*SSASWEHHVLT Trigger: GGTCAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCTGAACCTTGGAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR GCA 72 bp | CAGCCAAACACCTTGCGTCTGATGCAGCGGGAATACTaGTTGGGAGCTGGAAACAGTCATCTATTGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QPNTLRLMQREY*LGAGNSHLLVS Trigger: GGAAACCAATAGATGACTGTTTCCAGCTCCCAAGCAGTATTCCCGCTGCATCAGACGCAAGGTGTTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 72 bp | AATAATGTCTCCAAGGTTCAGGACTTTGCAATGGCTTaGATGGTCCTCTGCATCCTGGGAGCACCATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: NNVSKVQDFAMA*MVLCILGAPCA Trigger: AGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCTGAACCTTGGAGACATTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR GCA 72 bp | ACTCAGAAAGGTAGATGCTCTGTGGTCCCACCATGCTaGCCCCTAGTGGTTCTACTCTTTATTACACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: TQKGRCSVVPPC*PLVVLLFITLS Trigger: GGAAAGTGTAATAAAGAGTAGAACCACTAGGGGGCAGCATGGTGGGACCACAGAGCATCTACCTTTCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 72 bp | TCCAGCTACATGTGTGTATGGGCCCGTGTAAGCATTTaGGTGAGGCAGGGACATAGATTATTGGCACATATC | + |
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Preference number: 3 (lower is better) Translates to: SSYMCVWARVSI*VRQGHRLLAHI Trigger: GATATGTGCCAATAATCTATGTCCCTGCCTCACCCAAATGCTTACACGGGCCCATACACACATGTAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 72 bp | TACACTTTCCTTGAGTCCCCAGTGTTGCAGTCTCCCTaGGAGACTCTTGAGACCTTGACTGATTTGTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: YTFLESPVLQSP*ETLETLTDLSD Trigger: ATCTGACAAATCAGTCAAGGTCTCAAGAGTCTCTCAGGGAGACTGCAACACTGGGGACTCAAGGAAAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR TCA 72 bp | TTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTaGGGCTTGGTAATATGGCTGGGCAGCAATCAGATA | + |
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Preference number: 3 (lower is better) Translates to: LGWQKASVVPAK*GLVIWLGSNQI Trigger: TATCTGATTGCTGCCCAGCCATATTACCAAGCCTCACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR GCA 72 bp | CTACTGTCAGGGGAGGGAGCTGAGAAGCCCTGCATTTaGATTGGTTTGGAAGACAACAAAGTTCCATTACAT | + |
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Preference number: 3 (lower is better) Translates to: LLSGEGAEKPCI*IGLEDNKVPLH Trigger: ATGTAATGGAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCCCTGACAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 72 bp | GGTAAGCCTTTCACTAATGCAGAGGGAGTCTTGCTTTaGTTCACGAAGCTCTGTGGCTTTTTAGCTTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: GKPFTNAEGVLL*FTKLCGFLAFG Trigger: ACCAAAAGCTAAAAAGCCACAGAGCTTCGTGAACCAAAGCAAGACTCCCTCTGCATTAGTGAAAGGCTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR CCA 72 bp | AAGGCAATAATAATATCCTTCCTTCACGGAGGCAGATaGACAAACATCATCCAAGGCTACACGAAGTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: KAIIISFLHGGR*TNIIQGYTKFR Trigger: TCTGAACTTCGTGTAGCCTTGGATGATGTTTGTCCATCTGCCTCCGTGAAGGAAGGATATTATTATTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTCAGGGACATAGATTATaGGCACATATCAATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVQGHRL*AHINAP Trigger: TGGGGCATTGATATGTGCCAATAATCTATGTCCCTG...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTTATAGCAGAAGCTACTaGGCTGAAGAAATGTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVYSRSY*AEEMCE Trigger: TTCACACATTTCTTCAGCCAAGTAGCTTCTGCTATA...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTGCTGGGTACCAACGCTaGACTGCTCAGAGGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLAGYQR*TAQRCR Trigger: GCGGCACCTCTGAGCAGTCCAGCGTTGGTACCCAGC...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTGGACCAGGTAAGGCTTaGCCTCCTTCAGGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLGPGKA*PPSGPR Trigger: CCGAGGACCTGAAGGAGGGCAAGCCTTACCTGGTCC...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAGCCTCTCCGCCTGTTaGAGCATGCACTCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSISLSAC*SMHSAL Trigger: GAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCCGCCTGTTGCAGCATaGACTCTGCCCTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLPPVAA*TLPSGC Trigger: ACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGTAGCTGTGACAAACTaGCGGCAGCCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLVAVTN*RQPSLS Trigger: GGAGAGGCTGGGCTGCCGGCAGTTTGTCACAGCTAC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCGCTGGGTACCAACGCTaGACTGCTCAGAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSAGYQR*TAQRCR Trigger: GCGGCACCTCTGAGCAGTCCAGCGTTGGTACCCAGC...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTTCAACCAGGTCTTCTaGGAGGGCGTACACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLFNQVF*EGVHPC Trigger: GCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTAGTTCATCCAATTCCTaGAGGTCCGCTCTTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLSSSNS*RSALPS Trigger: CGAGGGAAGAGCGGACCTTCAGGAATTGGATGAACT...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTCATCCCTTTCCCCATaGGGCAGGCAAACACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLSSLSP*GRQTLS Trigger: TGACAGTGTTTGCCTGCCTCATGGGGAAAGGGATGA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACGGACCAGGTAAGGCTTaGCCTCCTTCAGGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQVGLKALRKVDALWSHGPGKA*PPSGPR Trigger: CCGAGGACCTGAAGGAGGGCAAGCCTTACCTGGTCC...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCCGCCTGTTGCAGCATaGACTCTGCCCTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLPPVAA*TLPSGC Trigger: ACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCAGCCTCTCCGCCTGTTaGAGCATGCACTCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSSLSAC*SMHSAL Trigger: GAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCT...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCGTAGCTGTGACAAACTaGCGGCAGCCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSVAVTN*RQPSLS Trigger: GGAGAGGCTGGGCTGCCGGCAGTTTGTCACAGCTAC...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTATGCACTCTGCCCTCTaGATGTCATCCTTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIMHSAL*MSSFSL Trigger: GAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCAT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCGGACCAGGTAAGGCTTaGCCTCCTTCAGGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFGPGKA*PPSGPR Trigger: CCGAGGACCTGAAGGAGGGCAAGCCTTACCTGGTCC...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTTGCAGCATGCACTCTaGCCTCTGGATGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLLQHAL*PLDVIL Trigger: AAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCTGATCTTTCCATCTTaGTCCAGATCACCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSILIFPS*SRSPVA Trigger: GGCCACAGGTGATCTGGACCAAGATGGAAAGATCAG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGCAGGCAGGCGGCCTTaGACAAGTCATTTAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLAGRRP*TSHLAH Trigger: ATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCCATCAGGTTTTCTGTaGTTTCTCTCACTCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIPSGFL*FLSLGT Trigger: GGTACCGAGTGAGAGAAATCACAGAAAACCTGATGG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCTTCTCCCTCAGTCCTaGCATGTCAATCACAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLLLPQS*HVNHNR Trigger: GCGGTTGTGATTGACATGTCAGGACTGAGGGAGAAG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTAGGGAGAATTTAGCTTaGTTCTTCCCCAGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLRENLA*FFPRST Trigger: AGTGGACCTGGGGAAGAATCAAGCTAAATTCTCCCT...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAGGGAGAATTTAGCTTaGTTCTTCCCCAGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIRENLA*FFPRST Trigger: AGTGGACCTGGGGAAGAATCAAGCTAAATTCTCCCT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAAACCAATGCCAGCGTaGGAGTTCGGTTTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIKPMPA*EFGFLH Trigger: ATGAAGGAAACCGAACTCTCACGCTGGCATTGGTTT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCCAATCTTGATGACTTaGCACAAAAGTCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIPILMT*HKSPRT Trigger: GGTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCCCGCCTGTTGCAGCATaGACTCTGCCCTCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFPPVAA*TLPSGC Trigger: ACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGG...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTTCTTCATCTCCTTTTaGAGCCACTTGCTCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLFFISF*SHLLEQ Trigger: CTGCTCGAGCAAGTGGCTCCAAAAGGAGATGAAGAA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGATGCACTCTGCCCTCTaGATGTCATCCTTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLMHSAL*MSSFSL Trigger: GAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCAT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAGGCCAGGTTCAACTTaGGGTTCCCTCGGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLRPGST*GSLGQH Trigger: ATGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCCCCAGTCAATGTCCTaGTTCTCTGGTTTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIPQSMS*FSGLCK Trigger: CTTACACAAACCAGAGAACCAGGACATTGACTGGGG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACTTCAACCAGGTCTTCTaGGAGGGCGTACACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQVGLKALRKVDALWSHFNQVF*EGVHPC Trigger: GCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAA...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCTTCTCCCTCAGTCCTaGCATGTCAATCACAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSLLPQS*HVNHNR Trigger: GCGGTTGTGATTGACATGTCAGGACTGAGGGAGAAG...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGAGTTCATCCAATTCCTaGAGGTCCGCTCTTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWSSSNS*RSALPS Trigger: CGAGGGAAGAGCGGACCTTCAGGAATTGGATGAACT...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCATAGAGCTGGAAGATaGCTAAGGCATCCGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLHRAGR*LRHPIS Trigger: ACTTATCGGATGCCTTAGTCATCTTCCAGCTCTATG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTTCGGTTTCCTTCATTaGGGTCTTGTCCTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLFGFLH*GLVLRC Trigger: GCATCGCAGGACAAGACCTCAATGAAGGAAACCGAA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGTCATCCCTTTCCCCATaGGGCAGGCAAACACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWSSLSP*GRQTLS Trigger: TGACAGTGTTTGCCTGCCTCATGGGGAAAGGGATGA...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTTGCAGCATGCACTCTaGCCTCTGGATGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLLQHAL*PLDVIL Trigger: AAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTGCTGGTACTGATCTTTaGGTCCTTGAAGCTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIAGTDL*VLEASN Trigger: ATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGC...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAAGTTCAAGTTTTCCTaGATGGTGAATGGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSIKFKFS*MVNGVS Trigger: GCTCACACCATTCACCATTCAGGAAAACTTGAACTT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGTTCGGTTTCCTTCATTaGGGTCTTGTCCTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWFGFLH*GLVLRC Trigger: GCATCGCAGGACAAGACCTCAATGAAGGAAACCGAA...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAAACCAATGCCAGCGTaGGAGTTCGGTTTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLKPMPA*EFGFLH Trigger: ATGAAGGAAACCGAACTCTCACGCTGGCATTGGTTT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTTTATGGAACCTGGCTaGATGGCGTCAATGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLFMEPG*MASMRS Trigger: GGATCTCATTGACGCCATTCAGCCAGGTTCCATAAA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCTTGCAGCATGCACTCTaGCCTCTGGATGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSLQHAL*PLDVIL Trigger: AAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAA...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGCTGATCTTTCCATCTTaGTCCAGATCACCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWLIFPS*SRSPVA Trigger: GGCCACAGGTGATCTGGACCAAGATGGAAAGATCAG...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCTCGTCAATCGTGTCTaGCACAGACAGGTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLLVNRV*HRQVDH Trigger: ATGATCAACCTGTCTGTGCCAGACACGATTGACGAG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCCCCAGTCAATGTCCTaGTTCTCTGGTTTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLPQSMS*FSGLCK Trigger: CTTACACAAACCAGAGAACCAGGACATTGACTGGGG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCCATCAGGTTTTCTGTaGTTTCTCTCACTCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSPSGFL*FLSLGT Trigger: GGTACCGAGTGAGAGAAATCACAGAAAACCTGATGG...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCTGGCACAGACAGGTTaGTCATTTTACAAAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SASWEHHVLTPSGLSVSILAQTG*SFYKEL Trigger: TAGTTCTTTGTAAAATGATCAACCTGTCTGTGCCAG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCTGGCACAGACAGGTTaGTCATTTTACAAAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLLAQTG*SFYKEL Trigger: TAGTTCTTTGTAAAATGATCAACCTGTCTGTGCCAG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCAGGGAGAATTTAGCTTaGTTCTTCCCCAGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSRENLA*FFPRST Trigger: AGTGGACCTGGGGAAGAATCAAGCTAAATTCTCCCT...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCTTCGGTTTCCTTCATTaGGGTCTTGTCCTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFFGFLH*GLVLRC Trigger: GCATCGCAGGACAAGACCTCAATGAAGGAAACCGAA...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCTTTATGGAACCTGGCTaGATGGCGTCAATGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSFMEPG*MASMRS Trigger: GGATCTCATTGACGCCATTCAGCCAGGTTCCATAAA...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAGGCAAACACTGTCATaGCCATTTTGGGGTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLRQTLS*PFWGSL Trigger: AAGTGAACCCCAAAATGGTCATGACAGTGTTTGCCT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACCCAATCTTGATGACTTaGCACAAAAGTCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSQVGLKALRKVDALWSHPILMT*HKSPRT Trigger: GGTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGG...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGCCAATCTTGATGACTTaGCACAAAAGTCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWPILMT*HKSPRT Trigger: GGTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGG...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCCTGATCTTTCCATCTTaGTCCAGATCACCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFLIFPS*SRSPVA Trigger: GGCCACAGGTGATCTGGACCAAGATGGAAAGATCAG...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACTTCTTCATCTCCTTTTaGAGCCACTTGCTCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQVGLKALRKVDALWSHFFISF*SHLLEQ Trigger: CTGCTCGAGCAAGTGGCTCCAAAAGGAGATGAAGAA...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGCCCCAGTCAATGTCCTaGTTCTCTGGTTTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWPQSMS*FSGLCK Trigger: CTTACACAAACCAGAGAACCAGGACATTGACTGGGG...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| 3UTR CAA 72 bp | TGCCCCCTAGTGGTTCTACTCTTTATTACACTTTCCTaGAGTCCCCAGTGTTGCAGTCTCCCTGAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CPLVVLLFITLS*SPQCCSLPERL Trigger: GAGTCTCTCAGGGAGACTGCAACACTGGGGACTCAAGGAAAGTGTAATAAAGAGTAGAACCACTAGGGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGGCAGGCAGGCGGCCTTaGACAAGTCATTTAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVAGRRP*TSHLAH Trigger: ATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGC...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAATCAACAGGGACTTTaGTCTTCTCATAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLNQQGL*SSHRAG Trigger: TCCAGCTCTATGAGAAGATCAAAGTCCCTGTTGATT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCAGGCAAACACTGTCATaGCCATTTTGGGGTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQVGLKALRKVDALWSRQTLS*PFWGSL Trigger: AAGTGAACCCCAAAATGGTCATGACAGTGTTTGCCT...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTTTTGGCAACCTCGGTaGTTTTTAAGCCATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLFWQPR*FLSHGR Trigger: TCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGAGCCTCTCCGCCTGTTaGAGCATGCACTCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMSLSAC*SMHSAL Trigger: GAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCT...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTAGAGATGGCATACTTTaGATTGTTGAGTTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLRDGIL*IVEFLF Trigger: GAAGAGAAACTCAACAATGCAAAGTATGCCATCTCT...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CCA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTGTGCTTTTTAAGCCATaGAAGACCTTGATAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAPCADPLRLVCVDFWLVLFKP*KTLINS Trigger: TGAGTTTATCAAGGTCTTCCATGGCTTAAAAAGCAC...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGATGCACTCTGCCCTCTaGATGTCATCCTTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVMHSAL*MSSFSL Trigger: GAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCAT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGAGGCCAGGTTCAACTTaGGGTTCCCTCGGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVRPGST*GSLGQH Trigger: ATGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| 3UTR CAA 72 bp | GGGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTaGGAAGACAACAAAGTTCCATTACATCCTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: GEGAEKPCICIG*EDNKVPLHPST Trigger: GGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCCATAGAGCTGGAAGATaGCTAAGGCATCCGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFHRAGR*LRHPIS Trigger: ACTTATCGGATGCCTTAGTCATCTTCCAGCTCTATG...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGTTTTGGCAACCTCGGTaGTTTTTAAGCCATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YGSEGNGANSQTHRETDWFWQPR*FLSHGR Trigger: TCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAA...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGCTGGGTACCAACGCTaGACTGCTCAGAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVAGYQR*TAQRCR Trigger: GCGGCACCTCTGAGCAGTCCAGCGTTGGTACCCAGC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCAAGTTCAAGTTTTCCTaGATGGTGAATGGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFKFKFS*MVNGVS Trigger: GCTCACACCATTCACCATTCAGGAAAACTTGAACTT...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCAATCAACAGGGACTTTaGTCTTCTCATAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRELRSPAFALVWKTTKFNQQGL*SSHRAG Trigger: TCCAGCTCTATGAGAAGATCAAAGTCCCTGTTGATT...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGTAGCTGTGACAAACTaGCGGCAGCCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVVAVTN*RQPSLS Trigger: GGAGAGGCTGGGCTGCCGGCAGTTTGTCACAGCTAC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAGAGATGGCATACTTTaGATTGTTGAGTTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQWLEWSSASWEHHVLRDGIL*IVEFLF Trigger: GAAGAGAAACTCAACAATGCAAAGTATGCCATCTCT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| 3UTR CAA 72 bp | TGTCAGGGGAGGGAGCTGAGAAGCCCTGCATTTGCATaGGTTTGGAAGACAACAAAGTTCCATTACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CQGRELRSPAFA*VWKTTKFHYIL Trigger: AAGGATGTAATGGAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCCCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCTTCTCCCTCAGTCCTaGCATGTCAATCACAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMLLPQS*HVNHNR Trigger: GCGGTTGTGATTGACATGTCAGGACTGAGGGAGAAG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGAGTTCATCCAATTCCTaGAGGTCCGCTCTTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMSSSNS*RSALPS Trigger: CGAGGGAAGAGCGGACCTTCAGGAATTGGATGAACT...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGAGGCAAACACTGTCATaGCCATTTTGGGGTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVRQTLS*PFWGSL Trigger: AAGTGAACCCCAAAATGGTCATGACAGTGTTTGCCT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGTCATCCCTTTCCCCATaGGGCAGGCAAACACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMSSLSP*GRQTLS Trigger: TGACAGTGTTTGCCTGCCTCATGGGGAAAGGGATGA...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGGCTGGTACTGATCTTTaGGTCCTTGAAGCTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVAGTDL*VLEASN Trigger: ATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGC...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGAATCAACAGGGACTTTaGTCTTCTCATAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVNQQGL*SSHRAG Trigger: TCCAGCTCTATGAGAAGATCAAAGTCCCTGTTGATT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGTTTATGGAACCTGGCTaGATGGCGTCAATGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMFMEPG*MASMRS Trigger: GGATCTCATTGACGCCATTCAGCCAGGTTCCATAAA...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCTCGTCAATCGTGTCTaGCACAGACAGGTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMLVNRV*HRQVDH Trigger: ATGATCAACCTGTCTGTGCCAGACACGATTGACGAG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTCCATCAGGTTTTCTGTaGTTTCTCTCACTCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVPSGFL*FLSLGT Trigger: GGTACCGAGTGAGAGAAATCACAGAAAACCTGATGG...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTAAGTTCAAGTTTTCCTaGATGGTGAATGGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVKFKFS*MVNGVS Trigger: GCTCACACCATTCACCATTCAGGAAAACTTGAACTT...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTAGAGATGGCATACTTTaGATTGTTGAGTTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVRDGIL*IVEFLF Trigger: GAAGAGAAACTCAACAATGCAAAGTATGCCATCTCT...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGTGCTTTTTAAGCCATaGAAGACCTTGATAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVVLFKP*KTLINS Trigger: TGAGTTTATCAAGGTCTTCCATGGCTTAAAAAGCAC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCAGCCTCTCCGCCTGTaGCAGCATGCACTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIQPLRL*QHALCP Trigger: AGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGCAGCCTCTCCGCCTGTaGCAGCATGCACTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YGSEGNGANSQTHRETDWQPLRL*QHALCP Trigger: AGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTG...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCAGCCTCTCCGCCTGTaGCAGCATGCACTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSQVGLKALRKVDALWSQPLRL*QHALCP Trigger: AGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTG...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS TCA 90 bp | TCTTTCCATCTTGGTCCAGATCACCTGTGGCCATCAGGTTTTCTGTaGTTTCTCTCACTCGGTACCCAGGCAGAGGCAGGCAGGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFHLGPDHLWPSGFL*FLSLGTQAEAGRRP Trigger: AGGCCGCCTGCCTGCCTCTGCCTGGGTACCGAGTGAGAGAAATCACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTGCTGATCTTTCCATCTaGGTCCAGATCACCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIADLSI*VQITCG Trigger: GCCACAGGTGATCTGGACCAAGATGGAAAGATCAGC...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCCATCGGTATCAACTTaGGCAAAAGCCTCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLPSVST*AKASLS Trigger: GCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGGCAGGCAGGCGGCCTaGAACAAGTCATTTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLGRQAA*NKSFSS Trigger: TGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCCCAATCTTGATGACTaGCCACAAAAGTCCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIPNLDD*PQKSQD Trigger: GTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGGG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTATGTCGGTGCTGAAGTaGGTGATTTTGGTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIMSVLK*VILVQP Trigger: AGGCTGCACCAAAATCACCAACTTCAGCACCGACAT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCCTTTTGGAGCCACTaGCTCGAGCAGGTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSISFWSH*LEQVVI Trigger: TATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGA...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTCCTTTTGGAGCCACTaGCTCGAGCAGGTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLSFWSH*LEQVVI Trigger: TATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAAGGCCAGGTTCAACTaGGGGTTCCCTCGGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLKARFN*GFPRTT Trigger: TGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCTT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTGTTCGGTTTCCTTCATaGAGGTCTTGTCCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLVRFPS*RSCPAM Trigger: CATCGCAGGACAAGACCTCAATGAAGGAAACCGAAC...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCTGAAGTTGGTGATTTaGGTGCAGCCTGCGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLLKLVI*VQPAFS Trigger: AGAAAACGCAGGCTGCACCAAAATCACCAACTTCAG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTCTGATCTTTGGGTCCTaGAAGCTAGCAATGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLLIFGS*KLAMDE Trigger: CTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAG...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTCAGATCCCTTCCTTCTaGTTGATAGCTTTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIQIPSF*LIAFRK Trigger: CTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTG...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCCCAATCTTGATGACTaGCCACAAAAGTCCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLPNLDD*PQKSQD Trigger: GTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGGG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGATGTCGGTGCTGAAGTaGGTGATTTTGGTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLMSVLK*VILVQP Trigger: AGGCTGCACCAAAATCACCAACTTCAGCACCGACAT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTCCTTTTGGAGCCACTaGCTCGAGCAGGTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLSFWSH*LEQVVI Trigger: TATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTATTTGTTGAAGAGGTaGGCAATGAAGGCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIYLLKR*AMKARF Trigger: GAACCTGGCCTTCATTGCCAACCTCTTCAACAAATA...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTTTGGGGTATGGAGGCTaGTTTACTCTGTTCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLLGYGG*FTLFQS Trigger: TGATTGGAACAGAGTAAACAAGCCTCCATACCCCAA...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTTGGGGTATGGAGGCTaGTTTACTCTGTTCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSILGYGG*FTLFQS Trigger: TGATTGGAACAGAGTAAACAAGCCTCCATACCCCAA...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGTTCGGTTTCCTTCATaGAGGTCTTGTCCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLVRFPS*RSCPAM Trigger: CATCGCAGGACAAGACCTCAATGAAGGAAACCGAAC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS TCA 90 bp | CGGGAGGCTGGTACTGATCTTTGGGTCCTTGAAGCTAGCAATGGATaGGCTTTTCTGTGCCTCCTTCAAGGTCGTATTCACCCAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: REAGTDLWVLEASNG*AFLCLLQGRIHPVD Trigger: GTCAACTGGGTGAATACGACCTTGAAGGAGGCACAGAAAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGCCTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCAGCTGATGTATCCGTaGCCATCGGTATCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLQLMYP*PSVSTL Trigger: CAAAGTTGATACCGATGGCAACGGATACATCAGCTG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAAGTCATTTAGCTCATaGCAGCTGATGTATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIKSFSS*QLMYPL Trigger: CAACGGATACATCAGCTGCAATGAGCTAAATGACTT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCGCTGATCTTTCCATCTaGGTCCAGATCACCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRELRSPAFALVWKTTKFADLSI*VQITCG Trigger: GCCACAGGTGATCTGGACCAAGATGGAAAGATCAGC...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTAAGCCATGGAAGACCTaGATAAACTCATCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIKPWKT*INSSKL Trigger: CAGCTTTGATGAGTTTATCAAGGTCTTCCATGGCTT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTGTGAGCTTTTTCTTGTaGATCGTTCTCTCGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIVSFFL*IVLSSI Trigger: GATTGACGAGAGAACGATCAACAAGAAAAAGCTCAC...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACCCCAATCTTGATGACTaGCCACAAAAGTCCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSQVGLKALRKVDALWSHPNLDD*PQKSQD Trigger: GTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGGG...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGCTGAAGTTGGTGATTTaGGTGCAGCCTGCGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLLKLVI*VQPAFS Trigger: AGAAAACGCAGGCTGCACCAAAATCACCAACTTCAG...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGACTGTCATGACCATTTaGGGGTTCACTTCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLTVMTI*GFTSTR Trigger: CCTGGTTGAAGTGAACCCCAAAATGGTCATGACAGT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCCCATCGGTATCAACTTaGGCAAAAGCCTCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRELRSPAFALVWKTTKFPSVST*AKASLS Trigger: GCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGG...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACCAGCTGATGTATCCGTaGCCATCGGTATCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQVGLKALRKVDALWSHQLMYP*PSVSTL Trigger: CAAAGTTGATACCGATGGCAACGGATACATCAGCTG...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCTGAAGTTGGTGATTTaGGTGCAGCCTGCGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSQVGLKALRKVDALWSLKLVI*VQPAFS Trigger: AGAAAACGCAGGCTGCACCAAAATCACCAACTTCAG...GGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGTATTTGTTGAAGAGGTaGGCAATGAAGGCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLYLLKR*AMKARF Trigger: GAACCTGGCCTTCATTGCCAACCTCTTCAACAAATA...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACAAGTGGGGTTAAAGGCACTCAGAAAGGTAGATGCTCTGTGGTCCCACACTGTCATGACCATTTaGGGGTTCACTTCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQVGLKALRKVDALWSHTVMTI*GFTSTR Trigger: CCTGGTTGAAGTGAACCCCAAAATGGTCATGACAGT...GTGGGACCACAGAGCATCTACCTTTCTGAGTGCCTTTAACCCCACTTGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGACTGTCATGACCATTTaGGGGTTCACTTCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGSEGNGANSQTHRETDWTVMTI*GFTSTR Trigger: CCTGGTTGAAGTGAACCCCAAAATGGTCATGACAGT...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS GCA 90 bp | TTTGGGGTTCACTTCAACCAGGTCTTCTGGGAGGGCGTACACCCTTaGTCCGATTTTTCTGGCCATAGAGATGGCATACTTTGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FGVHFNQVFWEGVHP*SDFSGHRDGILCIV Trigger: AACAATGCAAAGTATGCCATCTCTATGGCCAGAAAAATCGGAGCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAAGTGAACCCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAAGTCATTTAGCTCATaGCAGCTGATGTATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLKSFSS*QLMYPL Trigger: CAACGGATACATCAGCTGCAATGAGCTAAATGACTT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGAAGCCATGGAAGACCTaGATAAACTCATCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLKPWKT*INSSKL Trigger: CAGCTTTGATGAGTTTATCAAGGTCTTCCATGGCTT...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGTGAGCTTTTTCTTGTaGATCGTTCTCTCGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLVSFFL*IVLSSI Trigger: GATTGACGAGAGAACGATCAACAAGAAAAAGCTCAC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTTCTGGCTTATGGCATACTTTGCATaGTTGAGTTTCTCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAPCADPLRLVCVDFWLMAYFA*LSFSSS Trigger: TGATGAAGAGAAACTCAACAATGCAAAGTATGCCAT...AAGCCAGAAATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATCCTGGGAGCACCATGTGCTGACCCCCTCAGGCTTGTCTGTGTCGATTATGGCATACTTTGCATaGTTGAGTTTCTCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SASWEHHVLTPSGLSVSIMAYFA*LSFSSS Trigger: TGATGAAGAGAAACTCAACAATGCAAAGTATGCCAT...AATCGACACAGACAAGCCTGAGGGGGTCAGCACATGGTGCTCCCAGGATGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGAAGCCATGGAAGACCTaGATAAACTCATCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YGSEGNGANSQTHRETDWKPWKT*INSSKL Trigger: CAGCTTTGATGAGTTTATCAAGGTCTTCCATGGCTT...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAGCTGAGAAGCCCTGCATTTGCATTGGTTTGGAAGACAACAAAGTTCTATTTGTTGAAGAGGTaGGCAATGAAGGCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRELRSPAFALVWKTTKFYLLKR*AMKARF Trigger: GAACCTGGCCTTCATTGCCAACCTCTTCAACAAATA...GAACTTTGTTGTCTTCCAAACCAATGCAAATGCAGGGCTTCTCAGCTCCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCAATGGCTTGAATGGTCCTCTGCATCCTGGGAGCACCATGTGCTGGTCGTATTCACCCAGTaGACAATAATGTCATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLQWLEWSSASWEHHVLVVFTQ*TIMSSL Trigger: CAATGATGACATTATTGTCAACTGGGTGAATACGAC...CAGCACATGGTGCTCCCAGGATGCAGAGGACCATTCAAGCCATTGCAAAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGGGCAGGCAGGCGGCCTaGAACAAGTCATTTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMGRQAA*NKSFSS Trigger: TGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCC...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TATGGTTCTGAGGGGAATGGAGCAAACTCACAGACTCACAGGGAGACAGACTGGGTCGTATTCACCCAGTaGACAATAATGTCATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: YGSEGNGANSQTHRETDWVVFTQ*TIMSSL Trigger: CAATGATGACATTATTGTCAACTGGGTGAATACGAC...CCAGTCTGTCTCCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGCAGATCCCTTCCTTCTaGTTGATAGCTTTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVQIPSF*LIAFRK Trigger: CTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTG...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS CCA 90 bp | CCATGGAAGACCTTGATAAACTCATCAAAGCTGATCTTTCCATCTTaGTCCAGATCACCTGTGGCCATCAGGTTTTCTGTGATTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PWKTLINSSKLIFPS*SRSPVAIRFSVISL Trigger: GAGAGAAATCACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCCATCGGTATCAACTTaGGCAAAAGCCTCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMPSVST*AKASLS Trigger: GCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | CCCAATTCCAGGAATTTTAGGGTGGCAAAAAGCTTCCGTAGTACCAGCAAAGTGAAGTCATTTAGCTCATaGCAGCTGATGTATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNSRNFRVAKSFRSTSKVKSFSS*QLMYPL Trigger: CAACGGATACATCAGCTGCAATGAGCTAAATGACTT...CACTTTGCTGGTACTACGGAAGCTTTTTGCCACCCTAAAATTCCTGGAATTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTGGCAGGCAGGCGGCCTaGAACAAGTCATTTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVGRQAA*NKSFSS Trigger: TGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCC...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTAAGGCCAGGTTCAACTaGGGGTTCCCTCGGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVKARFN*GFPRTT Trigger: TGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCTT...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCTGATCTTTGGGTCCTaGAAGCTAGCAATGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMLIFGS*KLAMDE Trigger: CTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGACAACAAAGTTCCATTACATCCTTCTACCCCTAAGGAAGATGCTATGCAGATCCCTTCCTTCTaGTTGATAGCTTTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEDNKVPLHPSTPKEDAMQIPSF*LIAFRK Trigger: CTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTG...CATAGCATCTTCCTTAGGGGTAGAAGGATGTAATGGAACTTTGTTGTCTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAATTGCTTATCTAGTGGGAGCTATTCAAATTCATACTGTCCTCTTTGTTTTGGGGTATGGAGGCTaGTTTACTCTGTTCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VEIAYLVGAIQIHTVLFVLGYGG*FTLFQS Trigger: TGATTGGAACAGAGTAAACAAGCCTCCATACCCCAA...AACAAAGAGGACAGTATGAATTTGAATAGCTCCCACTAGATAAGCAATTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | TGTGACAAACTGCCGGCAGCCCAGCCTCTCCGCCTGTaGCAGCATGCACTCTGCCCTCTGGATGTCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CDKLPAAQPLRL*QHALCPLDVIL Trigger: AAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTGGGCTGCCGGCAGTTTGTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | ATCAGTAGCTGTGACAAACTGCCGGCAGCCCAGCCTCTCCGCCTGTaGCAGCATGCACTCTGCCCTCTGGATGTCATCCTTCTCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISSCDKLPAAQPLRL*QHALCPLDVILLPQ Trigger: CTGAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTGGGCTGCCGGCAGTTTGTCACAGCTACTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | ATGCCATCGCCTACAGCATTGAAGAGATCGTCGGTGTaGGGGTTCATGGGGATGACATGCCGGCAGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MPSPTALKRSSV*GFMGMTCRQSG Trigger: CCCCGACTGCCGGCATGTCATCCCCATGAACCCCAACACCGACGATCTCTTCAATGCTGTAGGCGATGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS TCA 72 bp | CTTGGTCCAGATCACCTGTGGCCATCAGGTTTTCTGTaGTTTCTCTCACTCGGTACCCAGGCAGAGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPDHLWPSGFL*FLSLGTQAEAG Trigger: GCCTGCCTCTGCCTGGGTACCGAGTGAGAGAAATCACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
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| CDS CCA 72 bp | TTTCTTCCTCTGAGTAAGAGTGCTGGGTACCAACGCTaGACTGCTCAGAGGTGCCGCCAATCGCACAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: FLPLSKSAGYQR*TAQRCRQSHRS Trigger: GGATCTGTGCGATTGGCGGCACCTCTGAGCAGTCCAGCGTTGGTACCCAGCACTCTTACTCAGAGGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | GTGATTTCTCTCACTCGGTACCCAGGCAGAGGCAGGCAGGCGGCCTaGAACAAGTCATTTAGCTCATTGCAGCTGATGTATCCGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VISLTRYPGRGRQAA*NKSFSSLQLMYPLP Trigger: TGGCAACGGATACATCAGCTGCAATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCCTCTGCCTGGGTACCGAGTGAGAGAAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | TCCAGAACCGGGAGGCTGGTACTGATCTTTGGGTCCTaGAAGCTAGCAATGGATGAGCTTTTCTGTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRTGRLVLIFGS*KLAMDELFCAS Trigger: GGAGGCACAGAAAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | CCAGGCAGAGGCAGGCAGGCGGCCTTGAACAAGTCATTTAGCTCATaGCAGCTGATGTATCCGTTGCCATCGGTATCAACTTTGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGRGRQAALNKSFSS*QLMYPLPSVSTLAK Trigger: TTTTGCCAAAGTTGATACCGATGGCAACGGATACATCAGCTGCAATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCCTCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | CTGGACTGCTCAGAGGTGCCGCCAATCGCACAGATCCCTTCCTTCTaGTTGATAGCTTTTCGGAAGGTTTTGGCAACCTCGGTGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDCSEVPPIAQIPSF*LIAFRKVLATSVLF Trigger: AAAAAGCACCGAGGTTGCCAAAACCTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTGTGCGATTGGCGGCACCTCTGAGCAGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | CTGACATGTCAATCACAACCGCCGGGATCCCTTCTTCATCTCCTTTaGGAGCCACTTGCTCGAGCAGGTGGTAATAAGCTTTGGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LTCQSQPPGSLLHLL*EPLARAGGNKLWSP Trigger: AGGACTCCAAAGCTTATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGAGATGAAGAAGGGATCCCGGCGGTTGTGATTGACATGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS TCA 72 bp | AAGATGACTAAGGCATCCGATAAGTCGCTGTACAAGTaGTTGACGCGCGGGTTAACGCCCAGGGAGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KMTKASDKSLYK*LTRGLTPREFI Trigger: GATGAACTCCCTGGGCGTTAACCCGCGCGTCAATCACTTGTACAGCGACTTATCGGATGCCTTAGTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS GCA 72 bp | CACTTCAACCAGGTCTTCTGGGAGGGCGTACACCCTTaGTCCGATTTTTCTGGCCATAGAGATGGCATACTT | + |
|
Preference number: 6 (lower is better) Translates to: HFNQVFWEGVHP*SDFSGHRDGIL Trigger: AAGTATGCCATCTCTATGGCCAGAAAAATCGGAGCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | GGCAGGCAGGCGGCCTTGAACAAGTCATTTAGCTCATaGCAGCTGATGTATCCGTTGCCATCGGTATCAACT | + |
|
Preference number: 6 (lower is better) Translates to: GRQAALNKSFSS*QLMYPLPSVST Trigger: AGTTGATACCGATGGCAACGGATACATCAGCTGCAATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | TCAATGAGATCCAGAACCGGGAGGCTGGTACTGATCTTTGGGTCCTaGAAGCTAGCAATGGATGAGCTTTTCTGTGCCTCCTTCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SMRSRTGRLVLIFGS*KLAMDELFCASFKV Trigger: GACCTTGAAGGAGGCACAGAAAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGATCTCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS TCA 72 bp | CGTTGCCATCGGTATCAACTTTGGCAAAAGCCTCTCTaGGCTCCATCATTTCTTCGTCAGACACGGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RCHRYQLWQKPL*APSFLRQTRIL Trigger: GAGGATCCGTGTCTGACGAAGAAATGATGGAGCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGGCAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
||
| CDS TCA 72 bp | GGTACTGATCTTTGGGTCCTTGAAGCTAGCAATGGATaGGCTTTTCTGTGCCTCCTTCAAGGTCGTATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTDLWVLEASNG*AFLCLLQGRIH Trigger: GTGAATACGACCTTGAAGGAGGCACAGAAAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS TCA 72 bp | TCGTTCTCTCGTCAATCGTGTCTGGCACAGACAGGTTaGTCATTTTACAAAGAACTATGCCATCGCCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSRQSCLAQTG*SFYKELCHRLQ Trigger: CTGTAGGCGATGGCATAGTTCTTTGTAAAATGATCAACCTGTCTGTGCCAGACACGATTGACGAGAGAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
||
| CDS CAA 72 bp | ATCCCTTCCTTCTTGTTGATAGCTTTTCGGAAGGTTTaGGCAACCTCGGTGCTTTTTAAGCCATGGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: IPSFLLIAFRKV*ATSVLFKPWKT Trigger: GGTCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAACCTTCCGAAAAGCTATCAACAAGAAGGAAGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
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| CDS CAA 90 bp | GCCATGGAAGACCTTGATAAACTCATCAAAGCTGATCTTTCCATCTaGGTCCAGATCACCTGTGGCCATCAGGTTTTCTGTGATTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AMEDLDKLIKADLSI*VQITCGHQVFCDFS Trigger: AGAGAAATCACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
||
| CDS CAA 90 bp | CGGAAGGTTTTGGCAACCTCGGTGCTTTTTAAGCCATGGAAGACCTaGATAAACTCATCAAAGCTGATCTTTCCATCTTGGTCCAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RKVLATSVLFKPWKT*INSSKLIFPSWSRS Trigger: TGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAACCTTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
||
| CDS CAA 90 bp | ATCGCACAGATCCCTTCCTTCTTGTTGATAGCTTTTCGGAAGGTTTaGGCAACCTCGGTGCTTTTTAAGCCATGGAAGACCTTGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IAQIPSFLLIAFRKV*ATSVLFKPWKTLIN Trigger: GTTTATCAAGGTCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAACCTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTGTGCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
||
| CDS CAA 90 bp | ATGGATGAGCTTTTCTGTGCCTCCTTCAAGGTCGTATTCACCCAGTaGACAATAATGTCATCATTGACCTTCTGTCCACCTCCGATATCT | + |
|
Preference number: 6 (lower is better) Translates to: MDELFCASFKVVFTQ*TIMSSLTFCPPPIS Trigger: AGATATCGGAGGTGGACAGAAGGTCAATGATGACATTATTGTCAACTGGGTGAATACGACCTTGAAGGAGGCACAGAAAAGCTCATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124499.8 ENSMUST00000131802.2 ENSMUST00000145303.8 |
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| CDS CCA 72 bp | ACCTTGATAAACTCATCAAAGCTGATCTTTCCATCTTaGTCCAGATCACCTGTGGCCATCAGGTTTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLINSSKLIFPS*SRSPVAIRFSV Trigger: CACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | AACAAGTCATTTAGCTCATTGCAGCTGATGTATCCGTaGCCATCGGTATCAACTTTGGCAAAAGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: NKSFSSLQLMYP*PSVSTLAKASL Trigger: CAGAGAGGCTTTTGCCAAAGTTGATACCGATGGCAACGGATACATCAGCTGCAATGAGCTAAATGACTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000143539.8 ENSMUST00000145303.8 |
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| CDS CAA 72 bp | GACCTTGATAAACTCATCAAAGCTGATCTTTCCATCTaGGTCCAGATCACCTGTGGCCATCAGGTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DLDKLIKADLSI*VQITCGHQVFC Trigger: ACAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
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| CDS CCA 72 bp | CGGAAGGTTTTGGCAACCTCGGTGCTTTTTAAGCCATaGAAGACCTTGATAAACTCATCAAAGCTGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: RKVLATSVLFKP*KTLINSSKLIF Trigger: AAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGGCTTAAAAAGCACCGAGGTTGCCAAAACCTTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000122840.8 ENSMUST00000124499.8 ENSMUST00000125833.8 ENSMUST00000131802.2 ENSMUST00000134114.8 ENSMUST00000145303.8 |
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