Pregenerated sensors for LCMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074890Ensembl transcript IDs: ENSMUST00000099486.3, ENSMUST00000110674.4
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCCGTTGTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTTaGGACAGCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: MPLSWVVRSLAESHC*DSCRSFHGAGYLRT Trigger: GGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGCTGTCTCAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR GCA 90 bp | TCTTACCACATAGGTTACATGCCAGCGCCTATGGCTTTGGTAGAATaGACAATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTAC | + |
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Preference number: 1 (lower is better) Translates to: SYHIGYMPAPMALVE*TISTCRLTEEKHNY Trigger: GTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATATTGTGCATTCTACCAAAGCCATAGGCGCTGGCATGTAACCTATGTGGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR CCA 90 bp | CTGCTGGTCTGTATTTTAATCATCATTTTTATGGTCTCTGCTCAATaGTGTGGTAAGGAAGAAAGGTGTGTGTGTTGGGAGTGTGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LLVCILIIIFMVSAQ*CGKEERCVCWECGN Trigger: ATTGCCACACTCCCAACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGATGATTAAAATACAGACCAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR CAA 90 bp | GATGCCGTTGTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTaGAGACAGCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: DAVVLGGEKPRRVSL*RQLSFLPRSWIPQN Trigger: GTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGCTGTCTCAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR CAA 90 bp | AGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCTaGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTTGAGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RPEGHLSASKNDAVV*GGEKPRRVSLLRQL Trigger: CAGCTGTCTCAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAAGAAAGGTGTGTGTGTTaGGAGTGTGGCAATACAACA | + |
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Preference number: 2 (lower is better) Translates to: LCWFLVRAETGKLIEPQKERCVC*ECGNTT Trigger: TGTTGTATTGCCACACTCCCAACACACACACCTTTC...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAAATGGTCTCTGCTCAATaGTGTGGTAAGGAAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LCWFLVRAETGKLIEPQKMVSAQ*CGKEER Trigger: CCTTTCTTCCTTACCACACCATTGAGCAGAGACCAT...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR CCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTTGTGTGTTGGGAGTGTaGCAATACAACAAATTCACC | + |
|
Preference number: 2 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPCVLGV*QYNKFT Trigger: GGTGAATTTGTTGTATTGCCACACTCCCAACACACA...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR GCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTCACGAGTCTTTAAACTaGAGTGTTCATTTTAGACTG | + |
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Preference number: 2 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPHESLN*SVHFRL Trigger: CAGTCTAAAATGAACACTGCAGTTTAAAGACTCGTG...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR CAA 90 bp | TGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCCGCAGAGTCTCACTGTaGAGACAGCTGTCGTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: CLLHSRPEGHLSASKNDARRVSL*RQLSFL Trigger: AAGGAACGACAGCTGTCTCAACAGTGAGACTCTGCG...GGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR-3UTR CAA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTAGAAAGGTGTGTGTGTaGGGAGTGTGGCAATACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPRKVCV*GVWQYN Trigger: GTTGTATTGCCACACTCCCAACACACACACCTTTCT...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR GCA 72 bp | ATAGGTTACATGCCAGCGCCTATGGCTTTGGTAGAATaGACAATATCAACCTGTAGACTGACAGAGGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: IGYMPAPMALVE*TISTCRLTEEK Trigger: CTTTTCCTCTGTCAGTCTACAGGTTGATATTGTGCATTCTACCAAAGCCATAGGCGCTGGCATGTAACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTAGTTGTGCTGGTTCCTaGTTAGAGCTGAGACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: IPELYSAVDFYHDLCETFSCAGS*LELRLE Trigger: TTCCAGTCTCAGCTCTAACAAGGAACCAGCACAACT...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR CCA 72 bp | CAGGTCAACACTACATTCCTGAACTATACTCAGCTGTaGATTTTTACCATGACCTGTGTGAAACTTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: QVNTTFLNYTQL*IFTMTCVKLFP Trigger: TGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAATGTAGTGTTGACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTGTCACAGACCCAGGTTaGGGAATGTTTTTCGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: IPELYSAVDFYHDLCETFVTDPG*GMFFVF Trigger: AAAAACGAAAAACATTCCCAAACCTGGGTCTGTGAC...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR GCA 90 bp | GCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGTCAGGTCCAGGGCGCTaGAGGCAGTCCAGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: AVVPSTELDTSEPESPCLSGPGR*RQSSQL Trigger: AAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGA...CAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | CTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCGATCTGGAGAGCACGTaGAACCTGCTCACTCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHSRPEGHLSASKNDAVVDLEST*NLLTRQ Trigger: CTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATC...GACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | TTCAAAGCAGAAGCTGTGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCTGCTGCAGCATGATCTaGCCAAAGGCATCCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FKAEAVSTPFQARGSSQRCCSMI*PKASPG Trigger: GCCGGGGGATGCCTTTGGGCAGATCATGCTGCAGCA...GCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACACAGCTTCTGCTTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | TTCAAAGCAGAAGCTGTGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCCCCTTGCCAACTaGAGGCGCTATGGGAATGCC | + |
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Preference number: 4 (lower is better) Translates to: FKAEAVSTPFQARGSSQRLPLAN*RRYGNA Trigger: GGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAG...GCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACACAGCTTCTGCTTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | GCCGTTGTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTTGAGACAGCTGACCTCCAGCGATAAGTaGTCCCCCTTGCCAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: AVVLGGEKPRRVSLLRQLTSSDK*SPLPTA Trigger: TGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGT...CAGCTGTCTCAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR CCA 90 bp | GCGCCTCCAAAAATGATGCCGTTGTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTGAGAGCCCCAGAGGCTaGACTTACTGGGGAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: APPKMMPLSWVVRSLAESESPRG*TYWGES Trigger: AGACTCTCCCCAGTAAGTCCAGCCTCTGGGGCTCTC...AGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCATCATTTTTGGAGGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGGCAGTCCAGCCAGCTTaGAGGAAGCGCTGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GMPCDGFSNASRLNGNQVAVQPA*RKRWRW Trigger: CCAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGC...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR CAA 72 bp | GTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTaGAGACAGCTGTCGTTCCTTCCACGGAGCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: VLGGEKPRRVSL*RQLSFLPRSWI Trigger: TATCCAGCTCCGTGGAAGGAACGACAGCTGTCTCAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | TCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCTCAGGCCATGCAAGGGTaGATGCAACCGCTGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SIPGQRVISAPPKMMPLSQAMQG*MQPLKV Trigger: CACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTG...AGACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | GCGCCTCCAAAAATGATGCCGTTGTCTTGGGTGGTGAGAAGCCTCGCAGAGTCTGAGGCAGGATCTATCTaGAAAGAAGCCTCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: APPKMMPLSWVVRSLAESEAGSI*KEASEG Trigger: GCCCTCAGAGGCTTCTTTTCAGATAGATCCTGCCTC...AGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCATCATTTTTGGAGGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | GCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGGGAACTGAGGAGGAATaGATCCAGACCCCTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: AVVPSTELDTSEPESPCLGTEEE*IQTPPT Trigger: GGTTGGAGGGGTCTGGATTCATTCCTCCTCAGTTCC...CAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | GCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGAGAGCACGTGAAACCTaGTCACTCGGCAGTGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: AVVPSTELDTSEPESPCLRARET*SLGSVV Trigger: GACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCT...CAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | TCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCTATAAGCAGGAGCTGCTaGTCTTCAGGAAGGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SIPGQRVISAPPKMMPLSISRSC*SSGRRA Trigger: CGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTAT...AGACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAAGGTCCGCGCCCAGGATaGGGTAGTCCGCGCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LCWFLVRAETGKLIEPQKGPRPG*GSPRSR Trigger: TCGAGAGCGCGGACTACCGCATCCTGGGCGCGGACC...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR CCA 90 bp | CTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCCGTGTGAGAGTACCTTaGGGTAATGGAGGGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LHSRPEGHLSASKNDAVVRVRVP*GNGGLD Trigger: ATCCAGCCCTCCATTACCCCAAGGTACTCTCACACG...GACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| 3UTR CAA 72 bp | GGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCTaGGGTGGTGAGAAGCCTCGCAGAGTCTCACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GHLSASKNDAVV*GGEKPRRVSLL Trigger: CAACAGTGAGACTCTGCGAGGCTTCTCACCACCCAAGACAACGGCATCATTTTTGGAGGCGCTGAGATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | TTCAAAGCAGAAGCTGTGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCGGCAGAAAGAAACCCTaGAGGCGAGGCAGGATCTAT | + |
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Preference number: 4 (lower is better) Translates to: FKAEAVSTPFQARGSSQRGRKKP*RRGRIY Trigger: ATAGATCCTGCCTCGCCTTCAGGGTTTCTTTCTGCC...GCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACACAGCTTCTGCTTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR CCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTCCCAAGGACAGGATCTaGGCTCTGGTCCGGGACGGG | + |
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Preference number: 4 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPPKDRI*ALVRDG Trigger: CCCGTCCCGGACCAGAGCCCAGATCCTGTCCTTGGG...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR GCA 90 bp | AGAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCCTCCCCCTTGCCAACTaGAGGCGCTATGGGAATGCC | + |
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Preference number: 4 (lower is better) Translates to: RKVCVLGVWQYNKFTLRSLPLAN*RRYGNA Trigger: GGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAG...GGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR GCA 90 bp | TCTTACCACATAGGTTACATGCCAGCGCCTATGGCTTTGGTAGAATGCACAATAAGCTGCTGTCGTTGGTaGTCTGGACCGTTCCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SYHIGYMPAPMALVECTISCCRW*SGPFPP Trigger: GGGCGGGAACGGTCCAGAGCACCAACGACAGCAGCT...TATTGTGCATTCTACCAAAGCCATAGGCGCTGGCATGTAACCTATGTGGTAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR CCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTGCGTCGGGGAAACGCTaGGCGGCCCAGGCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVASGKR*AAQAMR Trigger: CCTCATTGCCTGGGCCGCCCAGCGTTTCCCCGACGC...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR TCA 90 bp | AGCAATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTGAAAGTGCTGCAGCATaGTCTGCCCAAAGGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: SNASRLNGNQVMCPPSTTESAAA*SAQRHP Trigger: GGGATGCCTTTGGGCAGATCATGCTGCAGCACTTTC...AGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | GTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGATCCTGAAAAGAAGCCTCTaGGGGCTCAAACACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VVPSTELDTSEPESPCLILKRSL*GLKHWS Trigger: ACTCCAGTGTTTGAGCCCTCAGAGGCTTCTTTTCAG...GATCAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | TGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGACGCTGTGTCAATCTaGTATTCAGAGCTCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: CLLHSRPEGHLSASKNDADAVSI*YSELNP Trigger: AGGGTTGAGCTCTGAATATCAGATTGACACAGCGTC...GGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTTGCTGCAGCATGATCTaGCCAAAGGCATCCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPCCSMI*PKASPG Trigger: GCCGGGGGATGCCTTTGGGCAGATCATGCTGCAGCA...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR GCA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGGCGCTGCTGTGGTTGTaGAGCATTAATGGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: GMPCDGFSNASRLNGNQVALLWL*SINGHG Trigger: GCCATGGCCATTAATGCTGCACAACCACAGCAGCGC...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR GCA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGCAGGAAGGAGGGCGCTaGTGTGGTTGTGCAGCATTA | + |
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Preference number: 4 (lower is better) Translates to: GMPCDGFSNASRLNGNQVQEGGR*CGCAAL Trigger: TAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTG...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR CCA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAACGGCCAGGAGCAGCGTaGGAGAGGTGGCGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ELYSAVDFYHDLCETFSKRPGAA*ERWRPG Trigger: GCCTGGACGCCACCTCTCCCACGCTGCTCCTGGCCG...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR TCA 90 bp | TCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTGTCTAAACACTGGAGTTTCTaGCAGAATGTCTCCCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: SIPGQRVISAPPKMMPLSKHWSF*QNVSPR Trigger: TCTAGGGGAGACATTCTGTCAGAAACTCCAGTGTTT...AGACAACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
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| CDS-3UTR TCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAAGATCTGGAGAGCACGTaGAACCTGCTCACTCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCWFLVRAETGKLIEPQKDLEST*NLLTRQ Trigger: CTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATC...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS-3UTR GCA 90 bp | CTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTACTTCCGTTGTTGAATaGCGCCAACATGACAACACT | + |
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Preference number: 4 (lower is better) Translates to: LLHSRPEGHLSASKNDAVTSVVE*RQHDNT Trigger: AGTGTTGTCATGTTGGCGGCATTCAACAACGGAAGT...AACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR GCA 90 bp | GAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCTACCTCCAGCGATAAGTaGTCCCCCTTGCCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERCVCWECGNTTNSPLGPTSSDK*SPLPTA Trigger: TGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGT...AGGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | CTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTCAGAAAGCCTTGTCATaGTGTGATAAAGGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSRPEGHLSASKNDAVQKALS*CDKGVH Trigger: ATGGACGCCTTTATCACACCATGACAAGGCTTTCTG...AACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAAGAAAGTGCTGCAGCATaGTCTGCCCAAAGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCWFLVRAETGKLIEPQKESAAA*SAQRHP Trigger: GGGATGCCTTTGGGCAGATCATGCTGCAGCACTTTC...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTAAGCGAGTCGGAGCCTaGGCCCAAGGACAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVKRVGA*AQGQDL Trigger: CAGATCCTGTCCTTGGGCTCAGGCTCCGACTCGCTT...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR GCA 90 bp | CTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGTTAATGTCTCCCCTAGATaGTGCCAGGATGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLHSRPEGHLSASKNDAVNVSPR*CQDEIM Trigger: CATTATTTCATCCTGGCAGCATCTAGGGGAGACATT...AACGGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR GCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTGCGCTGCTGTGGTTGTaGAGCATTAATGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPALLWL*SINGHG Trigger: GCCATGGCCATTAATGCTGCACAACCACAGCAGCGC...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | GCTGTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGGAATCCAGAGGACACTaGTTTGAGAAAGAGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVPSTELDTSEPESPCLESRGH*FEKEYR Trigger: TCTGTACTCTTTCTCAAACCAGTGTCCTCTGGATTC...CAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCCGTGTGAGAGTACCTTaGGGTAATGGAGGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKVCVLGVWQYNKFTLRSRVRVP*GNGGLD Trigger: ATCCAGCCCTCCATTACCCCAAGGTACTCTCACACG...GGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTGAGGCAGGATCTATCTaGAAAGAAGCCTCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPEAGSI*KEASEG Trigger: GCCCTCAGAGGCTTCTTTTCAGATAGATCCTGCCTC...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTCAGAGGACACTGGTTTaGGAAAGAGTACAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNASRLNGNQVMCPPSTTQRTLV*ERVQSS Trigger: TGAGCTCTGTACTCTTTCTCAAACCAGTGTCCTCTG...AGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR TCA 90 bp | GATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAGGGCTGGATATCTATTaGTTCCCAGAGGAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGFSNASRLNGNQVMCPPGLDIY*FPEESR Trigger: TCTGGATTCCTCTGGGAATCAATAGATATCCAGCCC...TGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR TCA 90 bp | AATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTAAGAGTCACTCCAGGAACTaGGGAGGAATGAATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NASRLNGNQVMCPPSTTKSHSRN*GGMNPD Trigger: GTCTGGATTCATTCCTCCTCAGTTCCTGGAGTGACT...CTTAGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR GCA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAATCAGGTCCAGGGCGCTaGAGGCAGTCCAGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELYSAVDFYHDLCETFSKSGPGR*RQSSQL Trigger: AAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGA...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | AGGATGTATGCCACTCTTTTGATGCTTTATTTTTATACTTACTGCTGGTCTGTAGCCTCTCCTAATCGCTaGAGCTCCCGCAGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RMYATLLMLYFYTYCWSVASPNR*SSRRSA Trigger: CGCGGACCTGCGGGAGCTCCAGCGATTAGGAGAGGC...TACAGACCAGCAGTAAGTATAAAAATAAAGCATCAAAAGAGTGGCATACATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTCAGGCCATGCAAGGGTaGATGCAACCGCTGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVQAMQG*MQPLKV Trigger: CACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTG...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGCTTGTACTGGGATTCTaGCCCAAGCCATTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGMPCDGFSNASRLNGNQLVLGF*PKPLSL Trigger: TAGAGACAATGGCTTGGGTCAGAATCCCAGTACAAG...CTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR GCA 90 bp | AATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTAAGTTCTCCAAAGCCTCCTaGACTGAAAATAACGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NASRLNGNQVMCPPSTTKFSKAS*TENNAR Trigger: CCTGGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAA...CTTAGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR GCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTAGAGCACGTGAAACCTaGTCACTCGGCAGTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVRARET*SLGSVV Trigger: GACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCT...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGTTGTATAAATCAAGTTaGAGAGCCCCAGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMPCDGFSNASRLNGNQVLYKSS*RAPEAG Trigger: TCCAGCCTCTGGGGCTCTCCAACTTGATTTATACAA...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR TCA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGCAGGATGAAATAATGTaGACACTTCAGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GMPCDGFSNASRLNGNQVQDEIM*TLQMPL Trigger: GAGTGGCATCTGAAGTGTTCACATTATTTCATCCTG...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR TCA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTGACGCTGTGTCAATCTaGTATTCAGAGCTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPDAVSI*YSELNP Trigger: AGGGTTGAGCTCTGAATATCAGATTGACACAGCGTC...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTCAAGCGATCGTTTGCTaGGGGAGCTGCTGTCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFQAIVC*GSCCRW Trigger: CCAACGACAGCAGCTCCCTCAGCAAACGATCGCTTG...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCCCACTGTGTGGGGGTTaGAATAAGTACCAAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKVCVLGVWQYNKFTLRSPLCGG*NKYQRK Trigger: TTTCCTTTGGTACTTATTTCAACCCCCACACAGTGG...GGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTGGTTCCTTGTTAGAGCTGAGACTGGAAAACTGATAGAACCCCAGAAATTCTCCAAAGCCTCCTaGACTGAAAATAACGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCWFLVRAETGKLIEPQKFSKAS*TENNAR Trigger: CCTGGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAA...TTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACAAGGAACCAGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTGAGAGCCCCAGAGGCTaGACTTACTGGGGAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFESPRG*TYWGES Trigger: AGACTCTCCCCAGTAAGTCCAGCCTCTGGGGCTCTC...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTGGAACTGAGGAGGAATaGATCCAGACCCCTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFGTEEE*IQTPPT Trigger: GGTTGGAGGGGTCTGGATTCATTCCTCCTCAGTTCC...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTCAGGAAGGAGGGCGCTaGTGTGGTTGTGCAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFQEGGR*CGCAAL Trigger: TAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTG...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR GCA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAAATAAGCAGGAGCTGCTaGTCTTCAGGAAGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELYSAVDFYHDLCETFSKISRSC*SSGRRA Trigger: CGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTAT...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | GAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCTGAATCCAGAGGACACTaGTTTGAGAAAGAGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERCVCWECGNTTNSPLGPESRGH*FEKEYR Trigger: TCTGTACTCTTTCTCAAACCAGTGTCCTCTGGATTC...AGGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAAGGCAGAAAGAAACCCTaGAGGCGAGGCAGGATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ELYSAVDFYHDLCETFSKGRKKP*RRGRIY Trigger: ATAGATCCTGCCTCGCCTTCAGGGTTTCTTTCTGCC...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTCTTGTACTGGGATTCTaGCCCAAGCCATTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVLVLGF*PKPLSL Trigger: TAGAGACAATGGCTTGGGTCAGAATCCCAGTACAAG...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTCAGAGGACACTGGTTTaGGAAAGAGTACAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVQRTLV*ERVQSS Trigger: TGAGCTCTGTACTCTTTCTCAAACCAGTGTCCTCTG...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTCTGAAAAGAAGCCTCTaGGGGCTCAAACACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFLKRSL*GLKHWS Trigger: ACTCCAGTGTTTGAGCCCTCAGAGGCTTCTTTTCAG...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTAGTCACTCCAGGAACTaGGGAGGAATGAATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFSHSRN*GGMNPD Trigger: GTCTGGATTCATTCCTCCTCAGTTCCTGGAGTGACT...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CCA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTCAGAAAGCCTTGTCATaGTGTGATAAAGGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVQKALS*CDKGVH Trigger: ATGGACGCCTTTATCACACCATGACAAGGCTTTCTG...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTGGGCTGGATATCTATTaGTTCCCAGAGGAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFGLDIY*FPEESR Trigger: TCTGGATTCCTCTGGGAATCAATAGATATCCAGCCC...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR GCA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAAACTTCCGTTGTTGAATaGCGCCAACATGACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: ELYSAVDFYHDLCETFSKTSVVE*RQHDNT Trigger: AGTGTTGTCATGTTGGCGGCATTCAACAACGGAAGT...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTCAGGATGAAATAATGTaGACACTTCAGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IPELYSAVDFYHDLCETFQDEIM*TLQMPL Trigger: GAGTGGCATCTGAAGTGTTCACATTATTTCATCCTG...AAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTCAGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR TCA 90 bp | AGGATGTATGCCACTCTTTTGATGCTTTATTTTTATACTTACTGCTGGTCTGTAAAACACTGGAGTTTCTaGCAGAATGTCTCCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RMYATLLMLYFYTYCWSVKHWSF*QNVSPR Trigger: TCTAGGGGAGACATTCTGTCAGAAACTCCAGTGTTT...TACAGACCAGCAGTAAGTATAAAAATAAAGCATCAAAAGAGTGGCATACATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | TGGAGGGCTCCAAGTAGGTCAGCACCGCCTCGGCCAGGAGCAGCGTaGGAGAGGTGGCGTCCAGGCCGGCGCCATCCAGGGCCTCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WRAPSRSAPPRPGAA*ERWRPGRRHPGPLL Trigger: TAGGAGAGGCCCTGGATGGCGCCGGCCTGGACGCCACCTCTCCCACGCTGCTCCTGGCCGAGGCGGTGCTGACCTACTTGGAGCCCTCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | CCAAGTAGGTCAGCACCGCCTCGGCCAGGAGCAGCGTGGGAGAGGTaGCGTCCAGGCCGGCGCCATCCAGGGCCTCTCCTAATCGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSRSAPPRPGAAWER*RPGRRHPGPLLIAG Trigger: TCCAGCGATTAGGAGAGGCCCTGGATGGCGCCGGCCTGGACGCCACCTCTCCCACGCTGCTCCTGGCCGAGGCGGTGCTGACCTACTTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | GGGCCTCTCCTAATCGCTGGAGCTCCCGCAGGTCCGCGCCCAGGATaGGGTAGTCCGCGCTCTCGAAGCACAGAGATGACGCCGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPLLIAGAPAGPRPG*GSPRSRSTEMTPSP Trigger: GGGACTCGGCGTCATCTCTGTGCTTCGAGAGCGCGGACTACCGCATCCTGGGCGCGGACCTGCGGGAGCTCCAGCGATTAGGAGAGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | CTGCCGAGAGAAGGCGGCGATAGAACTCGTTCAGGTCCAGGGCGCTaGAGGCAGTCCAGCCAGCTTGAAGGAAGCGCTGGCGCTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPREGGDRTRSGPGR*RQSSQLEGSAGAGP Trigger: AGGCCCAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGAACGAGTTCTATCGCCGCCTTCTCTCGGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | TCCCGGGACCAGCAGCGCCGCAAAGGGGTCGCGCACGTATCCGTGTaGGGCAAGCGATCGTTTGCTGAGGGAGCTGCTGTCGTTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRDQQRRKGVAHVSV*GKRSFAEGAAVVGA Trigger: AGCACCAACGACAGCAGCTCCCTCAGCAAACGATCGCTTGCCGCACACGGATACGTGCGCGACCCCTTTGCGGCGCTGCTGGTCCCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | GCGCTGGGCCTTCACGACGGGAAACAGCTCCAGGCCATGCAAGGGTaGATGCAACCGCTGAAAGTGCTGCAGCATGATCTGCCCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGLHDGKQLQAMQG*MQPLKVLQHDLPKG Trigger: GCCTTTGGGCAGATCATGCTGCAGCACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTGGAGCTGTTTCCCGTCGTGAAGGCCCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | CCTGCTCACTCGGCAGTGTCGTCCCTCTTGTTCTCCAAAGCCTCCTaGACTGAAAATAACGCCAGGGCTCAAGAGGGCAGAGGCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAHSAVSSLLFSKAS*TENNARAQEGRGVA Trigger: GGCCACGCCTCTGCCCTCTTGAGCCCTGGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | CCAGCGATAAGTGCTCCCCCTTGCCAACTGCAGGCGCTATGGGAATaGCGACCTTCGGGTGATGCGCCTTGTACTGGGATTCTGACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAISAPPCQLQALWE*RPSGDAPCTGILTQ Trigger: TTGGGTCAGAATCCCAGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | AGACCTCCAGCGATAAGTGCTCCCCCTTGCCAACTGCAGGCGCTATaGGAATGCCGACCTTCGGGTGATGCGCCTTGTACTGGGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPAISAPPCQLQAL*ECRPSGDAPCTGIL Trigger: CAGAATCCCAGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCCTCCAAAAATGATGCCGGCAGTCCAGCCAGCTaGAAGGAAGCGCTGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLHSRPEGHLSASKNDAGSPAS*KEALAL Trigger: CAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCC...GGCATCATTTTTGGAGGCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS TCA 90 bp | GCCAGGGCTCAAGAGGGCAGAGGCGTGGCCATATCGCTTCAGGCTTaGGTGCTGGTGGTCACTAGTGACTACTCTGGCAGAAAGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: ARAQEGRGVAISLQA*VLVVTSDYSGRKKP Trigger: GGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTTGAGCCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | TCCCCCTTGCCAACTGCAGGCGCTATGGGAATGCCGACCTTCGGGTaGTGCGCCTTGTACTGGGATTCTGACCCAAGCCATTGTCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPLPTAGAMGMPTFG*CALYWDSDPSHCLY Trigger: GTAGAGACAATGGCTTGGGTCAGAATCCCAGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | AGAGCTCAACAGTTCCTCAGAAGCCCCAAGACCTCCAGCGATAAGTaGTCCCCCTTGCCAACTGCAGGCGCTATGGGAATGCCGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQQFLRSPKTSSDK*SPLPTAGAMGMPTF Trigger: GAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGTCTTGGGGCTTCTGAGGAACTGTTGAGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | CCAGGCCATGCAAGGGTGAATGCAACCGCTGAAAGTGCTGCAGCATaGTCTGCCCAAAGGCATCCCCCGGCTGCATCTGCTCATAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PGHARVNATAESAAA*SAQRHPPAASAHRS Trigger: TGATCTATGAGCAGATGCAGCCGGGGGATGCCTTTGGGCAGATCATGCTGCAGCACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | ATATTCATCAAAGGGTTCAAGCGTCTCAACCCGCTGGCGCTCTTCTaGCGAGAGAAGGCGGCGATAGAACTCGTTCAGGTCCAGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFIKGFKRLNPLALF*REKAAIELVQVQGA Trigger: AGCGCCCTGGACCTGAACGAGTTCTATCGCCGCCTTCTCTCGGCAGAAGAGCGCCAGCGGGTTGAGACGCTTGAACCCTTTGATGAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | AGCCTTCCCATTCCGAGTCACAGGATCTGGAGAGCACGTGAAACCTaGTCACTCGGCAGTGTCGTCCCTCTTGTTCTCCAAAGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPIPSHRIWRARET*SLGSVVPLVLQSLL Trigger: CAGGAGGCTTTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAATGGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | CCTCCTGCACTGAAAATAACGCCAGGGCTCAAGAGGGCAGAGGCGTaGCCATATCGCTTCAGGCTTGAGTGCTGGTGGTCACTAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PPALKITPGLKRAEA*PYRFRLECWWSLVT Trigger: AGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTTGAGCCCTGGCGTTATTTTCAGTGCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | GGGCTCAAGAGGGCAGAGGCGTGGCCATATCGCTTCAGGCTTGAGTaGTGGTGGTCACTAGTGACTACTCTGGCAGAAAGAAACCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLKRAEAWPYRFRLE*WWSLVTTLAERNPE Trigger: TTCAGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTTGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | AAGAGGGCAGAGGCGTGGCCATATCGCTTCAGGCTTGAGTGCTGGTaGTCACTAGTGACTACTCTGGCAGAAAGAAACCCTGAAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRAEAWPYRFRLECW*SLVTTLAERNPEGE Trigger: CTCGCCTTCAGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | CTCAAGAGGGCAGAGGCGTGGCCATATCGCTTCAGGCTTGAGTGCTaGTGGTCACTAGTGACTACTCTGGCAGAAAGAAACCCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKRAEAWPYRFRLEC*WSLVTTLAERNPEG Trigger: GCCTTCAGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | CCAATAAGCAGGAGCTGCTGCTCTTCAGGAAGGAGGGCGCTGCTGTaGTTGTGCAGCATTAATGGCCATGGCACAGACGCTGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PISRSCCSSGRRALL*LCSINGHGTDAVSI Trigger: GATTGACACAGCGTCTGTGCCATGGCCATTAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGCAGAAGCTGTGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCGATAAGTGCTCCCCCTaGCCAACTGCAGGCGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: FKAEAVSTPFQARGSSQRDKCSP*PTAGAM Trigger: CATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATC...GCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACACAGCTTCTGCTTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS TCA 90 bp | ATTTGGCAGCCTTCCCATTCCGAGTCACAGGATCTGGAGAGCACGTaGAACCTGCTCACTCGGCAGTGTCGTCCCTCTTGTTCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IWQPSHSESQDLEST*NLLTRQCRPSCSPK Trigger: CTTTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAATGGGAAGGCTGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS GCA 90 bp | GTACCAAAGGAAAAGCAGTTCCCTCCACCTCCAATAAGCAGGAGCTaGTGCTCTTCAGGAAGGAGGGCGCTGCTGTGGTTGTGCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VPKEKQFPPPPISRS*CSSGRRALLWLCSI Trigger: AATGCTGCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTATTGGAGGTGGAGGGAACTGCTTTTCCTTTGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | CCAAGGTACTTATTTGGCAGCCTTCCCATTCCGAGTCACAGGATCTaGAGAGCACGTGAAACCTGCTCACTCGGCAGTGTCGTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRYLFGSLPIPSHRI*RARETCSLGSVVPL Trigger: AAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAATGGGAAGGCTGCCAAATAAGTACCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGCAGAAGCTGTGTCTACTCCATTCCAGGCCAGAGGGTCATCTCAGCGCAGGGCGCTGCTGTGGTaGTGCAGCATTAATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FKAEAVSTPFQARGSSQRRALLW*CSINGH Trigger: ATGGCCATTAATGCTGCACAACCACAGCAGCGCCCT...GCGCTGAGATGACCCTCTGGCCTGGAATGGAGTAGACACAGCTTCTGCTTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS GCA 90 bp | CCAAAGGAAAAGCAGTTCCCTCCACCTCCAATAAGCAGGAGCTGCTaGTCTTCAGGAAGGAGGGCGCTGCTGTGGTTGTGCAGCATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PKEKQFPPPPISRSC*SSGRRALLWLCSIN Trigger: ATTAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTATTGGAGGTGGAGGGAACTGCTTTTCCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 90 bp | GTCTTCCTCCAAGAACCAGAACCCGAGTATCAGAAAGCCTTGTCATaGTGTGATAAAGGCGTCCATCCCACTGGCCTTCAGTCCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLQEPEPEYQKALS*CDKGVHPTGLQSPR Trigger: CCTTGGGGACTGAAGGCCAGTGGGATGGACGCCTTTATCACACCATGACAAGGCTTTCTGATACTCGGGTTCTGGTTCTTGGAGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTGGCAGTCCAGCCAGCTaGAAGGAAGCGCTGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPGSPAS*KEALAL Trigger: CAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCC...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | GTCGTTCCTTCCACGGAGCTGGATACCTCAGAACCTGAAAGTCCATGTCTGATCCCCCAAGGTACTTATTaGGCAGCCTTCCCATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VVPSTELDTSEPESPCLIPQGTY*AAFPFR Trigger: TCGGAATGGGAAGGCTGCCAAATAAGTACCTTGGGG...GATCAGACATGGACTTTCAGGTTCTGAGGTATCCAGCTCCGTGGAAGGAACGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR CAA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTGATAAGTGCTCCCCCTaGCCAACTGCAGGCGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPDKCSP*PTAGAM Trigger: CATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATC...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | GAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCTAGGGCGCTGCTGTGGTaGTGCAGCATTAATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ERCVCWECGNTTNSPLGPRALLW*CSINGH Trigger: ATGGCCATTAATGCTGCACAACCACAGCAGCGCCCT...AGGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | ACTACTCTGGCAGAAAGAAACCCTGAAGGCGAGGCAGGATCTATCTaGAAAGAAGCCTCTGAGGGCTCAAACACTGGAGTTTCTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTLAERNPEGEAGSI*KEASEGSNTGVSDR Trigger: TCTGTCAGAAACTCCAGTGTTTGAGCCCTCAGAGGCTTCTTTTCAGATAGATCCTGCCTCGCCTTCAGGGTTTCTTTCTGCCAGAGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | GAAAGGTGTGTGTGTTGGGAGTGTGGCAATACAACAAATTCACCCTTAGGTCCTCCCCAAGGTACTTATTaGGCAGCCTTCCCATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ERCVCWECGNTTNSPLGPPQGTY*AAFPFR Trigger: TCGGAATGGGAAGGCTGCCAAATAAGTACCTTGGGG...AGGACCTAAGGGTGAATTTGTTGTATTGCCACACTCCCAACACACACACCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | GCTGGATATCTATTGATTCCCAGAGGAATCCAGAGGACACTGGTTTaGGAAAGAGTACAGAGCTCAACAGTTCCTCAGAAGCCCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGYLLIPRGIQRTLV*ERVQSSTVPQKPQD Trigger: GTCTTGGGGCTTCTGAGGAACTGTTGAGCTCTGTACTCTTTCTCAAACCAGTGTCCTCTGGATTCCTCTGGGAATCAATAGATATCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS TCA 90 bp | CCTGTAGTCAAACAGATAACAGTCACTCCAGGAACTGAGGAGGAATaGATCCAGACCCCTCCAACCAGAAGCAGCTTTCCATTAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: PVVKQITVTPGTEEE*IQTPPTRSSFPLNT Trigger: TGTGTTTAATGGAAAGCTGCTTCTGGTTGGAGGGGTCTGGATTCATTCCTCCTCAGTTCCTGGAGTGACTGTTATCTGTTTGACTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | GGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGTGAGTATACTTCCGTTGTaGAATGCCGCCAACATGACA | + |
|
Preference number: 5 (lower is better) Translates to: GMPCDGFSNASRLNGNQVSILPL*NAANMT Trigger: TGTCATGTTGGCGGCATTCAACAACGGAAGTATACT...CACCTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR CAA 90 bp | AATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTAAGAGGGCTGGATATCTATaGATTCCCAGAGGAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NASRLNGNQVMCPPSTTKRAGYL*IPRGIQ Trigger: CTGGATTCCTCTGGGAATCAATAGATATCCAGCCCT...CTTAGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS TCA 90 bp | TGGTTGTGCAGCATTAATGGCCATGGCACAGACGCTGTGTCAATCTaGTATTCAGAGCTCAACCCTGTAGTCAAACAGATAACAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: WLCSINGHGTDAVSI*YSELNPVVKQITVT Trigger: AGTGACTGTTATCTGTTTGACTACAGGGTTGAGCTCTGAATATCAGATTGACACAGCGTCTGTGCCATGGCCATTAATGCTGCACAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCTTGTGATGGTTTCAGCAATGCTTCAAGGCTGAATGGTAACCAGGAGTATCAGAAAGCCTaGTCATGGTGTGATAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGMPCDGFSNASRLNGNQEYQKA*SWCDKG Trigger: GCCTTTATCACACCATGACAAGGCTTTCTGATACTC...CTGGTTACCATTCAGCCTTGAAGCATTGCTGAAACCATCACAAGGCATTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR CAA 90 bp | AATGCTTCAAGGCTGAATGGTAACCAGGTGATGTGTCCTCCAAGTACCACTAAGGATAGTATACTTCCGTaGTTGAATGCCGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: NASRLNGNQVMCPPSTTKDSILP*LNAANM Trigger: CATGTTGGCGGCATTCAACAACGGAAGTATACTATC...CTTAGTGGTACTTGGAGGACACATCACCTGGTTACCATTCAGCCTTGAAGCATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099486.3 |
||
| CDS-3UTR CAA 90 bp | ATATCAACCTGTAGACTGACAGAGGAAAAGCACAACTACTGTGGCTCACTTCCTAGGGCTGGATATCTATaGATTCCCAGAGGAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISTCRLTEEKHNYCGSLPRAGYL*IPRGIQ Trigger: CTGGATTCCTCTGGGAATCAATAGATATCCAGCCCT...AGGAAGTGAGCCACAGTAGTTGTGCTTTTCCTCTGTCAGTCTACAGGTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | TCATTTTTATGGTCTCTGCTCAATGGTGTGGTAAGGAAGAAAGGTGTGTGTGTTGATAGTATACTTCCGTaGTTGAATGCCGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLWSLLNGVVRKKGVCVDSILP*LNAANM Trigger: CATGTTGGCGGCATTCAACAACGGAAGTATACTATC...AACACACACACCTTTCTTCCTTACCACACCATTGAGCAGAGACCATAAAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS-3UTR CAA 90 bp | GAACTATACTCAGCTGTGGATTTTTACCATGACCTGTGTGAAACTTTTTCCAAAAGTATACTTCCGTTGTaGAATGCCGCCAACATGACA | + |
|
Preference number: 5 (lower is better) Translates to: ELYSAVDFYHDLCETFSKSILPL*NAANMT Trigger: TGTCATGTTGGCGGCATTCAACAACGGAAGTATACT...TTTGGAAAAAGTTTCACACAGGTCATGGTAAAAATCCACAGCTGAGTATAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 72 bp | TCAGCACCGCCTCGGCCAGGAGCAGCGTGGGAGAGGTaGCGTCCAGGCCGGCGCCATCCAGGGCCTCTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SAPPRPGAAWER*RPGRRHPGPLL Trigger: TAGGAGAGGCCCTGGATGGCGCCGGCCTGGACGCCACCTCTCCCACGCTGCTCCTGGCCGAGGCGGTGCTGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CCA 72 bp | CCAAGTAGGTCAGCACCGCCTCGGCCAGGAGCAGCGTaGGAGAGGTGGCGTCCAGGCCGGCGCCATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRSAPPRPGAA*ERWRPGRRHPG Trigger: CCCTGGATGGCGCCGGCCTGGACGCCACCTCTCCCACGCTGCTCCTGGCCGAGGCGGTGCTGACCTACTTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS CAA 72 bp | GCACGCAGCTCCGGGGTCTCCTCGATCCTCTCCGCCTaGAGCCGAGACACGTCCGGGAAGTCCACCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARSSGVSSILSA*SRDTSGKSTSQ Trigger: CTGGGAGGTGGACTTCCCGGACGTGTCTCGGCTCAAGGCGGAGAGGATCGAGGAGACCCCGGAGCTGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS TCA 72 bp | TTCAGGTCCAGGGCGCTGCAGGCAGTCCAGCCAGCTTaGAGGAAGCGCTGGCGCTGGGCCTTCACGACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FRSRALQAVQPA*RKRWRWAFTTG Trigger: TCCCGTCGTGAAGGCCCAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS TCA 72 bp | CACGCAGCTCCGGGGTCTCCTCGATCCTCTCCGCCTTaGGCCGAGACACGTCCGGGAAGTCCACCTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HAAPGSPRSSPP*AETRPGSPPPR Trigger: TCTGGGAGGTGGACTTCCCGGACGTGTCTCGGCTCAAGGCGGAGAGGATCGAGGAGACCCCGGAGCTGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 72 bp | CAGCAGCGCCGCAAAGGGGTCGCGCACGTATCCGTGTaGGGCAAGCGATCGTTTGCTGAGGGAGCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQRRKGVAHVSV*GKRSFAEGAAV Trigger: GACAGCAGCTCCCTCAGCAAACGATCGCTTGCCGCACACGGATACGTGCGCGACCCCTTTGCGGCGCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 72 bp | GATGACGCCGAGTCCCCGATCTTGAAAGGACCGGTCTaGGCACGCAGCTCCGGGGTCTCCTCGATCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DDAESPILKGPV*ARSSGVSSILS Trigger: GGAGAGGATCGAGGAGACCCCGGAGCTGCGTGCGCAGACCGGTCCTTTCAAGATCGGGGACTCGGCGTCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
||
| CDS GCA 72 bp | GAAGGCGGCGATAGAACTCGTTCAGGTCCAGGGCGCTaGAGGCAGTCCAGCCAGCTTGAAGGAAGCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGGDRTRSGPGR*RQSSQLEGSAG Trigger: GCCAGCGCTTCCTTCAAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGAACGAGTTCTATCGCCGCCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
||
| CDS CAA 90 bp | ATAGAACTCGTTCAGGTCCAGGGCGCTGCAGGCAGTCCAGCCAGCTaGAAGGAAGCGCTGGCGCTGGGCCTTCACGACGGGAAACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IELVQVQGAAGSPAS*KEALALGLHDGKQL Trigger: GAGCTGTTTCCCGTCGTGAAGGCCCAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCCTGCAGCGCCCTGGACCTGAACGAGTTCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | GAAGCCCCAAGACCTCCAGCGATAAGTGCTCCCCCTTaGCAACTGCAGGCGCTATGGGAATGCCGACCTTCG | + |
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Preference number: 6 (lower is better) Translates to: EAPRPPAISAPP*QLQALWECRPS Trigger: CGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGTCTTGGGGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | AGTGCTCCCCCTTGCCAACTGCAGGCGCTATGGGAATaGCGACCTTCGGGTGATGCGCCTTGTACTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: SAPPCQLQALWE*RPSGDAPCTGI Trigger: AATCCCAGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CCA 72 bp | GCGATAAGTGCTCCCCCTTGCCAACTGCAGGCGCTATaGGAATGCCGACCTTCGGGTGATGCGCCTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: AISAPPCQLQAL*ECRPSGDAPCT Trigger: AGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 72 bp | AGAAGCCCCAAGACCTCCAGCGATAAGTGCTCCCCCTaGCCAACTGCAGGCGCTATGGGAATGCCGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSPKTSSDKCSP*PTAGAMGMPTF Trigger: GAAGGTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGTCTTGGGGCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | CCAACTGCAGGCGCTATGGGAATGCCGACCTTCGGGTaGTGCGCCTTGTACTGGGATTCTGACCCAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PTAGAMGMPTFG*CALYWDSDPSH Trigger: ATGGCTTGGGTCAGAATCCCAGTACAAGGCGCATCACCCGAAGGTCGGCATTCCCATAGCGCCTGCAGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | GCAAGGGTGAATGCAACCGCTGAAAGTGCTGCAGCATaGTCTGCCCAAAGGCATCCCCCGGCTGCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ARVNATAESAAA*SAQRHPPAASA Trigger: AGCAGATGCAGCCGGGGGATGCCTTTGGGCAGATCATGCTGCAGCACTTTCAGCGGTTGCATTCACCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS GCA 72 bp | AAAGGGTTCAAGCGTCTCAACCCGCTGGCGCTCTTCTaGCGAGAGAAGGCGGCGATAGAACTCGTTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KGFKRLNPLALF*REKAAIELVQV Trigger: GACCTGAACGAGTTCTATCGCCGCCTTCTCTCGGCAGAAGAGCGCCAGCGGGTTGAGACGCTTGAACCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | CAGTTCCTCAGAAGCCCCAAGACCTCCAGCGATAAGTaGTCCCCCTTGCCAACTGCAGGCGCTATGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: QFLRSPKTSSDK*SPLPTAGAMGM Trigger: CATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCTGGAGGTCTTGGGGCTTCTGAGGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | AAGCAGTTCCCTCCACCTCCAATAAGCAGGAGCTGCTaGTCTTCAGGAAGGAGGGCGCTGCTGTGGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: KQFPPPPISRSC*SSGRRALLWLC Trigger: GCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTATTGGAGGTGGAGGGAACTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS CCA 72 bp | AGGAGCTGCTGCTCTTCAGGAAGGAGGGCGCTGCTGTaGTTGTGCAGCATTAATGGCCATGGCACAGACGCT | + |
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Preference number: 6 (lower is better) Translates to: RSCCSSGRRALL*LCSINGHGTDA Trigger: AGCGTCTGTGCCATGGCCATTAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | CCTTCCCATTCCGAGTCACAGGATCTGGAGAGCACGTaGAACCTGCTCACTCGGCAGTGTCGTCCCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PSHSESQDLEST*NLLTRQCRPSC Trigger: ACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAATGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | TGCTGCTCTTCAGGAAGGAGGGCGCTGCTGTGGTTGTaGAGCATTAATGGCCATGGCACAGACGCTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CCSSGRRALLWL*SINGHGTDAVS Trigger: TGACACAGCGTCTGTGCCATGGCCATTAATGCTGCACAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | GAAAAGCAGTTCCCTCCACCTCCAATAAGCAGGAGCTaGTGCTCTTCAGGAAGGAGGGCGCTGCTGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: EKQFPPPPISRS*CSSGRRALLWL Trigger: CAACCACAGCAGCGCCCTCCTTCCTGAAGAGCAGCAGCTCCTGCTTATTGGAGGTGGAGGGAACTGCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110674.4 |
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| CDS TCA 72 bp | CTTCACGACGGGAAACAGCTCCAGGCCATGCAAGGGTaGATGCAACCGCTGAAAGTGCTGCAGCATGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LHDGKQLQAMQG*MQPLKVLQHDL Trigger: CAGATCATGCTGCAGCACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTGGAGCTGTTTCCCGTCGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | AGGGCAGAGGCGTGGCCATATCGCTTCAGGCTTGAGTaGTGGTGGTCACTAGTGACTACTCTGGCAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RAEAWPYRFRLE*WWSLVTTLAER Trigger: TCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 90 bp | TCTGGAGAGCACGTGAAACCTGCTCACTCGGCAGTGTCGTCCCTCTaGTTCTCCAAAGCCTCCTGCACTGAAAATAACGCCAGGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGEHVKPAHSAVSSL*FSKASCTENNARAQ Trigger: TTGAGCCCTGGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS GCA 72 bp | ATTCCGAGTCACAGGATCTGGAGAGCACGTGAAACCTaGTCACTCGGCAGTGTCGTCCCTCTTGTTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: IPSHRIWRARET*SLGSVVPLVLQ Trigger: TTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CCA 72 bp | GAGGCGTGGCCATATCGCTTCAGGCTTGAGTGCTGGTaGTCACTAGTGACTACTCTGGCAGAAAGAAACCCT | + |
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Preference number: 6 (lower is better) Translates to: EAWPYRFRLECW*SLVTTLAERNP Trigger: AGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CCA 72 bp | GCAGAGGCGTGGCCATATCGCTTCAGGCTTGAGTGCTaGTGGTCACTAGTGACTACTCTGGCAGAAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AEAWPYRFRLEC*WSLVTTLAERN Trigger: GTTTCTTTCTGCCAGAGTAGTCACTAGTGACCACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CCA 72 bp | TTATTTGGCAGCCTTCCCATTCCGAGTCACAGGATCTaGAGAGCACGTGAAACCTGCTCACTCGGCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LFGSLPIPSHRI*RARETCSLGSV Trigger: GACACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAATGGGAAGGCTGCCAAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 72 bp | CACGTGAAACCTGCTCACTCGGCAGTGTCGTCCCTCTaGTTCTCCAAAGCCTCCTGCACTGAAAATAACGCC | + |
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Preference number: 6 (lower is better) Translates to: HVKPAHSAVSSL*FSKASCTENNA Trigger: GGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAACAAGAGGGACGACACTGCCGAGTGAGCAGGTTTCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 90 bp | GGGAGAGTCTTCCTCCAAGAACCAGAACCCGAGTATCAGAAAGCCTaGTCATGGTGTGATAAAGGCGTCCATCCCACTGGCCTTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GRVFLQEPEPEYQKA*SWCDKGVHPTGLQS Trigger: GGACTGAAGGCCAGTGGGATGGACGCCTTTATCACACCATGACAAGGCTTTCTGATACTCGGGTTCTGGTTCTTGGAGGAAGACTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CCA 72 bp | CAAGAACCAGAACCCGAGTATCAGAAAGCCTTGTCATaGTGTGATAAAGGCGTCCATCCCACTGGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QEPEPEYQKALS*CDKGVHPTGLQ Trigger: CTGAAGGCCAGTGGGATGGACGCCTTTATCACACCATGACAAGGCTTTCTGATACTCGGGTTCTGGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 72 bp | TTCCTCCAAGAACCAGAACCCGAGTATCAGAAAGCCTaGTCATGGTGTGATAAAGGCGTCCATCCCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: FLQEPEPEYQKA*SWCDKGVHPTG Trigger: GCCAGTGGGATGGACGCCTTTATCACACCATGACAAGGCTTTCTGATACTCGGGTTCTGGTTCTTGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | GTGGTCACTAGTGACTACTCTGGCAGAAAGAAACCCTaGAGGCGAGGCAGGATCTATCTGAAAAGAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VVTSDYSGRKKP*RRGRIYLKRSL Trigger: GAGGCTTCTTTTCAGATAGATCCTGCCTCGCCTTCAGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | CCCTGTAGTCAAACAGATAACAGTCACTCCAGGAACTaGGGAGGAATGAATCCAGACCCCTCCAACCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PCSQTDNSHSRN*GGMNPDPSNQK Trigger: CTTCTGGTTGGAGGGGTCTGGATTCATTCCTCCTCAGTTCCTGGAGTGACTGTTATCTGTTTGACTACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | AGAGTACCTTGGGGTAATGGAGGGCTGGATATCTATTaGTTCCCAGAGGAATCCAGAGGACACTGGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RVPWGNGGLDIY*FPEESRGHWFE Trigger: CTCAAACCAGTGTCCTCTGGATTCCTCTGGGAATCAATAGATATCCAGCCCTCCATTACCCCAAGGTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 90 bp | GGCTGGATATCTATTGATTCCCAGAGGAATCCAGAGGACACTGGTTaGAGAAAGAGTACAGAGCTCAACAGTTCCTCAGAAGCCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GWISIDSQRNPEDTG*RKSTELNSSSEAPR Trigger: TCTTGGGGCTTCTGAGGAACTGTTGAGCTCTGTACTCTTTCTCAAACCAGTGTCCTCTGGATTCCTCTGGGAATCAATAGATATCCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | CTATTGATTCCCAGAGGAATCCAGAGGACACTGGTTTaGGAAAGAGTACAGAGCTCAACAGTTCCTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLIPRGIQRTLV*ERVQSSTVPQK Trigger: CTTCTGAGGAACTGTTGAGCTCTGTACTCTTTCTCAAACCAGTGTCCTCTGGATTCCTCTGGGAATCAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | AGCATTAATGGCCATGGCACAGACGCTGTGTCAATCTaGTATTCAGAGCTCAACCCTGTAGTCAAACAGATA | + |
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Preference number: 6 (lower is better) Translates to: SINGHGTDAVSI*YSELNPVVKQI Trigger: TATCTGTTTGACTACAGGGTTGAGCTCTGAATATCAGATTGACACAGCGTCTGTGCCATGGCCATTAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS TCA 72 bp | AATGTCTCCCCTAGATGCTGCCAGGATGAAATAATGTaGACACTTCAGATGCCACTCCTCATATTCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: NVSPRCCQDEIM*TLQMPLLIFIK Trigger: TTTGATGAATATGAGGAGTGGCATCTGAAGTGTTCACATTATTTCATCCTGGCAGCATCTAGGGGAGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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| CDS CAA 72 bp | ATAAGTATCTTTGATTCTGATAGTATACTTCCGTTGTaGAATGCCGCCAACATGACAACACTGAACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ISIFDSDSILPL*NAANMTTLNLL Trigger: AAGAAGGTTCAGTGTTGTCATGTTGGCGGCATTCAACAACGGAAGTATACTATCAGAATCAAAGATACTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099486.3 ENSMUST00000110674.4 |
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