Pregenerated sensors for LCLAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054469Ensembl transcript IDs: ENSMUST00000067545.8, ENSMUST00000149064.9, ENSMUST00000232703.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCTGAGCCCTGGCTGAAGGTGTGGCAGGGGCATTCCTTAGGCTaGCAACCATCAAGGCCACATCTGCTTAGGCCTGATGCTCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: AAEPWLKVWQGHSLG*QPSRPHLLRPDAQV Trigger: TACTTGAGCATCAGGCCTAAGCAGATGTGGCCTTGATGGTTGTCAGCCTAAGGAATGCCCCTGCCACACCTTCAGCCAGGGCTCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR GCA 90 bp | CTGAGTGCAGATGTGATTTCCAGGCGAGGAAAGGGGGTCTTTTCCTaGCTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LSADVISRRGKGVFS*LTQHKRLSVMEGSL Trigger: CAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAGGCAGGAAAAGACCCCCTTTCCTCGCCTGGAAATCACATCTGCACTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 90 bp | TGCCCCAATCACATGACACAGATGGGAGCATGCAGCTCAGTGGAGTaGAAACAGTGGCCACAAGGATTCTCTTACCCAGGACACTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: CPNHMTQMGACSSVE*KQWPQGFSYPGHCV Trigger: CACGCAGTGTCCTGGGTAAGAGAATCCTTGTGGCCACTGTTTCCACTCCACTGAGCTGCATGCTCCCATCTGTGTCATGTGATTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 90 bp | CACATGACACAGATGGGAGCATGCAGCTCAGTGGAGTGGAAACAGTaGCCACAAGGATTCTCTTACCCAGGACACTGCGTGCTCGCTATT | + |
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Preference number: 1 (lower is better) Translates to: HMTQMGACSSVEWKQ*PQGFSYPGHCVLAI Trigger: AATAGCGAGCACGCAGTGTCCTGGGTAAGAGAATCCTTGTGGCCACTGTTTCCACTCCACTGAGCTGCATGCTCCCATCTGTGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | ATGACGCTCCCTGGTGACCATCAGGAAGGCAGGACTGAGTGTGAGTaGAAAGCAAGCTGCACCAGTTTCTGTCTTTTAAAAGCCAAATGG | + |
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Preference number: 1 (lower is better) Translates to: MTLPGDHQEGRTECE*KASCTSFCLLKAKW Trigger: CCATTTGGCTTTTAAAAGACAGAAACTGGTGCAGCTTGCTTTTCACTCACACTCAGTCCTGCCTTCCTGATGGTCACCAGGGAGCGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR GCA 90 bp | AGAGCTTCTTTGTTGGGCTTGAGAGCCGGTGAAATGGAACCAATCTaGAGAATTCAGACTTATACCAACATAGGGTCTGCGTGTGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: RASLLGLRAGEMEPI*RIQTYTNIGSACGV Trigger: CACGCCACACGCAGACCCTATGTTGGTATAAGTCTGAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 90 bp | GTGCCCAATGAGATGGACAGCACTGTTAACCGAGCCCAACTACTGTaGGCAAAGATGACAGCATTTCTCTTTTTCCTGGGCAACAAATTG | + |
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Preference number: 1 (lower is better) Translates to: VPNEMDSTVNRAQLL*AKMTAFLFFLGNKL Trigger: CAATTTGTTGCCCAGGAAAAAGAGAAATGCTGTCATCTTTGCCCACAGTAGTTGGGCTCGGTTAACAGTGCTGTCCATCTCATTGGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | CATAGCGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTaGGGCACCACTTTCCTCCTAGTGAGTGACGAGGAGAGACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: HSVLFCFSQPLTHWY*GTTFLLVSDEERLY Trigger: ATAAAGTCTCTCCTCGTCACTCACTAGGAGGAAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | ACACCCTGCATGCATAGGACAGACACCTGCCTTCCAGTTTCTGTCTaGACTACAGATGTTTTTCTAATGCATCTTTACATGAACCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: TPCMHRTDTCLPVSV*TTDVFLMHLYMNQS Trigger: GGACTGGTTCATGTAAAGATGCATTAGAAAAACATCTGTAGTTCAGACAGAAACTGGAAGGCAGGTGTCTGTCCTATGCATGCAGGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | TGTTCTGTGGGCGTGCAGAGGCAGGATTTTAGGGAGAGTCTTAAGTaGGAAGCTCTCGCAGATAGATATGTTTCTACTTCATTTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: CSVGVQRQDFRESLK*EALADRYVSTSFSV Trigger: GACTGAAAATGAAGTAGAAACATATCTATCTGCGAGAGCTTCTCACTTAAGACTCTCCCTAAAATCCTGCCTCTGCACGCCCACAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | CTGCTAGTCCTTATTGTGACTGTTCCAGAGCTTCTTTGTTGGGCTTaGGAGCCGGTGAAATGGAACCAATCTGCAGAATTCAGACTTATA | + |
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Preference number: 1 (lower is better) Translates to: LLVLIVTVPELLCWA*EPVKWNQSAEFRLI Trigger: TATAAGTCTGAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAGGACTAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | AGGTGTGCACAGCTACTAATTAGTAAGTTCCCAGCAGGATTAAAGTaGGTTTTGATGGAGCAGTTAAACATGGGCTGGCTTGTTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: RCAQLLISKFPAGLK*VLMEQLNMGWLVSP Trigger: TGGAGAAACAAGCCAGCCCATGTTTAACTGCTCCATCAAAACTCACTTTAATCCTGCTGGGAACTTACTAATTAGTAGCTGTGCACACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | GACAACCATCAAGGCCACATCTGCTTAGGCCTGATGCTCAAGTATTaGCTTAAAGCAGTTCCAAGCTCAAAAGCATTAGGTGTATATGCA | + |
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Preference number: 1 (lower is better) Translates to: DNHQGHICLGLMLKY*LKAVPSSKALGVYA Trigger: TGCATATACACCTAATGCTTTTGAGCTTGGAACTGCTTTAAGTCAATACTTGAGCATCAGGCCTAAGCAGATGTGGCCTTGATGGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 90 bp | TTAGTGATTGTTTGTAATACTCTGACCCTAGTAATTCACAGCGATTaGCCCCTGCTACATACTCAGCATTGGAATTACATTCAGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: LVIVCNTLTLVIHSD*PLLHTQHWNYIQRF Trigger: AAATCTCTGAATGTAATTCCAATGCTGAGTATGTAGCAGGGGTCAATCGCTGTGAATTACTAGGGTCAGAGTATTACAAACAATCACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGCTGCTTCCTTCTCGGGTTTGTTCTGTGGGCGTGCAGAGGCAGGATTTTCTGCTGAGCCCTGGCTaGGCTGCTGAGCCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KALLPSRVCSVGVQRQDFLLSPG*AAEPWL Trigger: CAGCCAGGGCTCAGCAGCTCAGCCAGGGCTCAGCAG...AAAATCCTGCCTCTGCACGCCCACAGAACAAACCCGAGAAGGAAGCAGCGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTGATGACGCTCCCTGGTaGCCATCAGGAAGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RFVLFQSTADPLVLRHHFDDAPW*PSGRQD Trigger: GTCCTGCCTTCCTGATGGTCACCAGGGAGCGTCATC...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATGGGGCTCAAAAGAATTAAAGAATaGACTGTGTCCTGCGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LTQHKRLSVMEGSLPMGLKRIKE*TVSCGG Trigger: TCCCCCGCAGGACACAGTCCATTCTTTAATTCTTTT...GAGCCCCATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | ACCATCCTGTCTGCAGGCATGTTTGTTGTAGCTCTAATGGCAGAAGGCAGACACAGGACTGAGTGTGAGTaGAAAGCAAGCTGCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: TILSAGMFVVALMAEGRHRTECE*KASCTS Trigger: ACTGGTGCAGCTTGCTTTTCACTCACACTCAGTCCT...GTGTCTGCCTTCTGCCATTAGAGCTACAACAAACATGCCTGCAGACAGGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGTTCCAGAGCTTCTTTGTTGGGCTTGAGAGCCGGTGAAATGGAACCAATCAGGCAGATTTCTGTCTaGGCACACAGGGCAGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: DCSRASLLGLRAGEMEPIRQISV*AHRAVK Trigger: CTTAACTGCCCTGTGTGCTCAGACAGAAATCTGCCT...GATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGGTTGTGTGTGTGTAACCTTAAAAACTAGGGAGTCAAACAGCTGTGTTGGGGAAGCTTCTATGTaGCTCTGTCCCTGCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GEGCVCVTLKTRESNSCVGEASM*LCPCPN Trigger: ATTGGGGCAGGGACAGAGGCACATAGAAGCTTCCCC...AACACAGCTGTTTGACTCCCTAGTTTTTAAGGTTACACACACACAACCCTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTCAGAGAGCCTGTGGGTaGCCAATGAGATGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RFVLFQSTADPLVLRHHFQRACG*PMRWTA Trigger: TGCTGTCCATCTCATTGGGCACCCACAGGCTCTCTG...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CAA 90 bp | GATCCCTCTGCTAGTCCTTATTGTGACTGTTCCAGAGCTTCTTTGTaGGGCTTGAGAGCCGGTGAAATGGAACCAATCTGCAGAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: DPSASPYCDCSRASL*GLRAGEMEPICRIQ Trigger: CTGAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAGGACTAGCAGAGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTCATCAAGGCCACATCTaGTTAGGCCTGATGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RFVLFQSTADPLVLRHHFHQGHI*LGLMLK Trigger: CTTGAGCATCAGGCCTAAGCAGATGTGGCCTTGATG...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CAA 90 bp | CCACAAGGATTCTCTTACCCAGGACACTGCGTGCTCGCTATTGGTTaGCTATGTTGTCACTGCTTCCAAATGATAGGAATATTTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PQGFSYPGHCVLAIG*LCCHCFQMIGIFGR Trigger: TCTGCCAAATATTCCTATCATTTGGAAGCAGTGACAACATAGCAAACCAATAGCGAGCACGCAGTGTCCTGGGTAAGAGAATCCTTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CAA 90 bp | TCTGCTAGTCCTTATTGTGACTGTTCCAGAGCTTCTTTGTTGGGCTaGAGAGCCGGTGAAATGGAACCAATCTGCAGAATTCAGACTTAT | + |
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Preference number: 2 (lower is better) Translates to: SASPYCDCSRASLLG*RAGEMEPICRIQTY Trigger: ATAAGTCTGAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAGGACTAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGTCACTGCTTCCAAATGATAGGAATATTTGGCAGACAGTAGGTCAGTGTAAGGGGGTCTTTTCCTaGCTCACTCAGCACAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: MLSLLPNDRNIWQTVGQCKGVFS*LTQHKR Trigger: TCTCTTGTGCTGAGTGAGGCAGGAAAAGACCCCCTT...ACACTGACCTACTGTCTGCCAAATATTCCTATCATTTGGAAGCAGTGACAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTAAAGCAAGTAGAGTGTCCACATTCTCTAGTTTTAGTGCTGTATTAGGAACACAGATGGGAGCATaGAGCTCAGTGGAGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLKASRVSTFSSFSAVLGTQMGA*SSVEWK Trigger: TTTCCACTCCACTGAGCTGCATGCTCCCATCTGTGT...TCCTAATACAGCACTAAAACTAGAGAATGTGGACACTCTACTTGCTTTAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGAAATGTAAACAGTTTAACACCGACAGGATCCCTCTGCTAGTCCTTATTTGCCAAGGCTACCTCTaGGCCAAAAGTCTGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IKKCKQFNTDRIPLLVLICQGYL*AKSLSE Trigger: TTCTGACAGACTTTTGGCTCAGAGGTAGCCTTGGCA...AATAAGGACTAGCAGAGGGATCCTGTCGGTGTTAAACTGTTTACATTTCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGGTTGTGTGTGTGTAACCTTAAAAACTAGGGAGTCAAACAGCTGTGTTTCTCCCACTAACAAATaGACAAACATCAAAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GEGCVCVTLKTRESNSCVSPTNK*TNIKKP Trigger: TGGCTTTTTGATGTTTGTGCATTTGTTAGTGGGAGA...AACACAGCTGTTTGACTCCCTAGTTTTTAAGGTTACACACACACAACCCTCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGTCACTGCTTCCAAATGATAGGAATATTTGGCAGACAGTAGGTCAGTGTGTCACTGTTGAGAGATaGCTAAAAAGAGAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MLSLLPNDRNIWQTVGQCVTVER*LKRESV Trigger: CACACTCTCTCTTTTTAGTCATCTCTCAACAGTGAC...ACACTGACCTACTGTCTGCCAAATATTCCTATCATTTGGAAGCAGTGACAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTTATTCTGGATGCATTTTACAGGTAATTCACAAATATCCCAGTGGACACCAGTTAAACATGGGCTaGCTTGTTTCTCCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PFYSGCILQVIHKYPSGHQLNMG*LVSPEA Trigger: TGCCTCTGGAGAAACAAGCCAGCCCATGTTTAACTG...GTGTCCACTGGGATATTTGTGAATTACCTGTAAAATGCATCCAGAATAAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CAA 90 bp | CTGTGGGCAAAGATGACAGCATTTCTCTTTTTCCTGGGCAACAAATaGCTAGCTATTTCCACATTTAAATGTGATCCATCAGAGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: LWAKMTAFLFFLGNK*LAISTFKCDPSEKL Trigger: AAGTTTCTCTGATGGATCACATTTAAATGTGGAAATAGCTAGCAATTTGTTGCCCAGGAAAAAGAGAAATGCTGTCATCTTTGCCCACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTTTATTCTGGATGCATTTTACAGGTAATTCACAAATATCCCAGTGGACACGCTTGCATTTTGTCTTaGCAGCTTAGTGATTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PFYSGCILQVIHKYPSGHACILS*QLSDCL Trigger: CAAACAATCACTAAGCTGTCAAGACAAAATGCAAGC...GTGTCCACTGGGATATTTGTGAATTACCTGTAAAATGCATCCAGAATAAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGAAATGTAAACAGTTTAACACCGACAGGATCCCTCTGCTAGTCCTTATTCTTCCAGTTTCTGTCTaGACTACAGATGTTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: IKKCKQFNTDRIPLLVLILPVSV*TTDVFL Trigger: TAGAAAAACATCTGTAGTTCAGACAGAAACTGGAAG...AATAAGGACTAGCAGAGGGATCCTGTCGGTGTTAAACTGTTTACATTTCTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAAATGTAAACAGTTTAACACCGACAGGATCCCTCTGCTAGTCCTTATTTTGCTATGTTGTCACTaGTTCCAAATGATAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: IKKCKQFNTDRIPLLVLILLCCH*FQMIGI Trigger: TATTCCTATCATTTGGAAGCAGTGACAACATAGCAA...AATAAGGACTAGCAGAGGGATCCTGTCGGTGTTAAACTGTTTACATTTCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 72 bp | CCCTGGCTGAAGGTGTGGCAGGGGCATTCCTTAGGCTaGCAACCATCAAGGCCACATCTGCTTAGGCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: PWLKVWQGHSLG*QPSRPHLLRPD Trigger: ATCAGGCCTAAGCAGATGTGGCCTTGATGGTTGTCAGCCTAAGGAATGCCCCTGCCACACCTTCAGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR GCA 72 bp | GGCGAAGGGAAGAACAAGAGACAGAGAGCCTGTGGGTaGCCAATGAGATGGACAGCACTGTTAACCGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GEGKNKRQRACG*PMRWTALLTEP Trigger: GGGCTCGGTTAACAGTGCTGTCCATCTCATTGGGCACCCACAGGCTCTCTGTCTCTTGTTCTTCCCTTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | GGTCTGCGTGTGGCGTGGTCACCATTAGAACACGAGTaGAAGGCGCTGCTTCCTTCTCGGGTTTGTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GLRVAWSPLEHE*KALLPSRVCSV Trigger: CACAGAACAAACCCGAGAAGGAAGCAGCGCCTTCCACTCGTGTTCTAATGGTGACCACGCCACACGCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR GCA 72 bp | TGTCCCTGCCCCAATCACATGACACAGATGGGAGCATaGAGCTCAGTGGAGTGGAAACAGTGGCCACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: CPCPNHMTQMGA*SSVEWKQWPQG Trigger: TCCTTGTGGCCACTGTTTCCACTCCACTGAGCTGCATGCTCCCATCTGTGTCATGTGATTGGGGCAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | CAGATGGGAGCATGCAGCTCAGTGGAGTGGAAACAGTaGCCACAAGGATTCTCTTACCCAGGACACTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: QMGACSSVEWKQ*PQGFSYPGHCV Trigger: CACGCAGTGTCCTGGGTAAGAGAATCCTTGTGGCCACTGTTTCCACTCCACTGAGCTGCATGCTCCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | GGTGTCCTGTCCCCAACGGGGCTTTCTCAGTGTGCTTaGCAAGATGAGGAAGTCCTTACCAGGTACAGATGC | + |
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Preference number: 3 (lower is better) Translates to: GVLSPTGLSQCA*QDEEVLTRYRC Trigger: GCATCTGTACCTGGTAAGGACTTCCTCATCTTGCCAAGCACACTGAGAAAGCCCCGTTGGGGACAGGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR GCA 72 bp | AGGCGCTGCTTCCTTCTCGGGTTTGTTCTGTGGGCGTaGAGAGGCAGGATTTTAGGGAGAGTCTTAAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RRCFLLGFVLWA*RGRILGRVLSE Trigger: CTCACTTAAGACTCTCCCTAAAATCCTGCCTCTGCACGCCCACAGAACAAACCCGAGAAGGAAGCAGCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | AACAAGAGACAGAGAGCCTGTGGGTGCCCAATGAGATaGACAGCACTGTTAACCGAGCCCAACTACTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: NKRQRACGCPMR*TALLTEPNYCG Trigger: CCCACAGTAGTTGGGCTCGGTTAACAGTGCTGTCCATCTCATTGGGCACCCACAGGCTCTCTGTCTCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | AGAGGGCGAAGGGAAGAACAAGAGACAGAGAGCCTGTaGGTGCCCAATGAGATGGACAGCACTGTTAACCGA | + |
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Preference number: 3 (lower is better) Translates to: RGRREEQETESL*VPNEMDSTVNR Trigger: TCGGTTAACAGTGCTGTCCATCTCATTGGGCACCCACAGGCTCTCTGTCTCTTGTTCTTCCCTTCGCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | AGTGGAAGGCGCTGCTTCCTTCTCGGGTTTGTTCTGTaGGCGTGCAGAGGCAGGATTTTAGGGAGAGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: SGRRCFLLGFVL*ACRGRILGRVL Trigger: TAAGACTCTCCCTAAAATCCTGCCTCTGCACGCCCACAGAACAAACCCGAGAAGGAAGCAGCGCCTTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR TCA 72 bp | CACTGGGGCTGGTGTTCATGGTGCCAAGGCTACCTCTaGGCCAAAAGTCTGTCAGAAACAGGTTGGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: HWGWCSWCQGYL*AKSLSETGWSF Trigger: AAAGGACCAACCTGTTTCTGACAGACTTTTGGCTCAGAGGTAGCCTTGGCACCATGAACACCAGCCCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| 3UTR CCA 72 bp | CACATGACACAGATGGGAGCATGCAGCTCAGTGGAGTaGAAACAGTGGCCACAAGGATTCTCTTACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HMTQMGACSSVE*KQWPQGFSYPG Trigger: TCCTGGGTAAGAGAATCCTTGTGGCCACTGTTTCCACTCCACTGAGCTGCATGCTCCCATCTGTGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | GTAGGTACAAGACACCTTTTAGGGCCACACGTGGTGTaGAGTCCACTTCGTGGCCAAGCAATTGTTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VGTRHLLGPHVV*SPLRGQAIVCH Trigger: GTGGCAAACAATTGCTTGGCCACGAAGTGGACTTCACACCACGTGTGGCCCTAAAAGGTGTCTTGTACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR GCA 72 bp | GTTGTAGCTCTAATGGCAGAAGGCAGACACCCTGCATaGATAGGACAGACACCTGCCTTCCAGTTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VVALMAEGRHPA*IGQTPAFQFLS Trigger: AGACAGAAACTGGAAGGCAGGTGTCTGTCCTATGCATGCAGGGTGTCTGCCTTCTGCCATTAGAGCTACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTGCGAGCACTTCAGCTCACCTGCACAGGGAGCAGGGAAAGAGTCTGCTGGCTACATACTCAGCATaGGAATTACATTCAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SAASTSAHLHREQGKSLLATYSA*ELHSEI Trigger: AATCTCTGAATGTAATTCCAATGCTGAGTATGTAGC...CAGCAGACTCTTTCCCTGCTCCCTGTGCAGGTGAGCTGAAGTGCTCGCAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR GCA 72 bp | GTTTGTTGTAGCTCTAATGGCAGAAGGCAGACACCCTaGATGCATAGGACAGACACCTGCCTTCCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VCCSSNGRRQTP*MHRTDTCLPVS Trigger: AGAAACTGGAAGGCAGGTGTCTGTCCTATGCATGCAGGGTGTCTGCCTTCTGCCATTAGAGCTACAACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR GCA 72 bp | AAGATGAGGAAGTCCTTACCAGGTACAGATGCGCACTaGCATCTTAGGAAAGGCAGATTTCTGTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KMRKSLPGTDAH*HLRKGRFLSEH Trigger: GTGCTCAGACAGAAATCTGCCTTTCCTAAGATGGCAGTGCGCATCTGTACCTGGTAAGGACTTCCTCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CCTGGTGACCATCAGGAAGGCAGGACTGAGTGTGAGTaGAAAGCAAGCTGCACCAGTTTCTGTCTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGDHQEGRTECE*KASCTSFCLLK Trigger: TTTTAAAAGACAGAAACTGGTGCAGCTTGCTTTTCACTCACACTCAGTCCTGCCTTCCTGATGGTCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CCACTGGTATTGAGGCACCACTTTCCTCCTAGTGAGTaGCGAGGAGAGACTTTATCTAAGAACACGGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: PLVLRHHFPPSE*RGETLSKNTVY Trigger: GTATACCGTGTTCTTAGATAAAGTCTCTCCTCGTCACTCACTAGGAGGAAAGTGGTGCCTCAATACCAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CCA 72 bp | AGGATTCTCTTACCCAGGACACTGCGTGCTCGCTATTaGTTTGCTATGTTGTCACTGCTTCCAAATGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: RILLPRTLRARY*FAMLSLLPNDR Trigger: CCTATCATTTGGAAGCAGTGACAACATAGCAAACCAATAGCGAGCACGCAGTGTCCTGGGTAAGAGAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | GGCGTGCAGAGGCAGGATTTTAGGGAGAGTCTTAAGTaGGAAGCTCTCGCAGATAGATATGTTTCTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GVQRQDFRESLK*EALADRYVSTS Trigger: TGAAGTAGAAACATATCTATCTGCGAGAGCTTCTCACTTAAGACTCTCCCTAAAATCCTGCCTCTGCACGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CTGTTCCAGAGCTTCTTTGTTGGGCTTGAGAGCCGGTaGAATGGAACCAATCTGCAGAATTCAGACTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: LFQSFFVGLESR*NGTNLQNSDLY Trigger: GTATAAGTCTGAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CTTATTGTGACTGTTCCAGAGCTTCTTTGTTGGGCTTaGGAGCCGGTGAAATGGAACCAATCTGCAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LIVTVPELLCWA*EPVKWNQSAEF Trigger: GAATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CCA 72 bp | ACCTTTGCGTTTGATTGGTGTAAAAGAATTAAAGAATaGACTGTGTCCTGCGGGGGAGGCAGACTACTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TFAFDWCKRIKE*TVSCGGGRLLP Trigger: AGGTAGTAGTCTGCCTCCCCCGCAGGACACAGTCCATTCTTTAATTCTTTTACACCAATCAAACGCAAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CAAGGCCACATCTGCTTAGGCCTGATGCTCAAGTATTaGCTTAAAGCAGTTCCAAGCTCAAAAGCATTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QGHICLGLMLKY*LKAVPSSKALG Trigger: ACCTAATGCTTTTGAGCTTGGAACTGCTTTAAGTCAATACTTGAGCATCAGGCCTAAGCAGATGTGGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CCA 72 bp | GATTCCCTGGGTTTGTTTCATCAAAGACACACAATGTaGGAACTCATCACCCAGCCTCTATATCGGTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: DSLGLFHQRHTM*ELITQPLYRFI Trigger: TATGAACCGATATAGAGGCTGGGTGATGAGTTCCCACATTGTGTGTCTTTGATGAAACAAACCCAGGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTAGTCCACCTTTGCGTTaGATTGGTGTAAAAGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: RFVLFQSTADPLVLRHHFSPPLR*IGVKEL Trigger: TAATTCTTTTACACCAATCAAACGCAAAGGTGGACT...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CATAGTCATGCAAAACTCGTCTCAGTTTACAAAGACTaGCATTCCCGTGACAACCCTAGGTTTTCACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: HSHAKLVSVYKD*HSRDNPRFSHE Trigger: TTCATGTGAAAACCTAGGGTTGTCACGGGAATGTCAGTCTTTGTAAACTGAGACGAGTTTTGCATGACTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | CAGCTACTAATTAGTAAGTTCCCAGCAGGATTAAAGTaGGTTTTGATGGAGCAGTTAAACATGGGCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLLISKFPAGLK*VLMEQLNMGWL Trigger: AAGCCAGCCCATGTTTAACTGCTCCATCAAAACTCACTTTAATCCTGCTGGGAACTTACTAATTAGTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | GTTTGTAATACTCTGACCCTAGTAATTCACAGCGATTaGCCCCTGCTACATACTCAGCATTGGAATTACATT | + |
|
Preference number: 3 (lower is better) Translates to: VCNTLTLVIHSD*PLLHTQHWNYI Trigger: AATGTAATTCCAATGCTGAGTATGTAGCAGGGGTCAATCGCTGTGAATTACTAGGGTCAGAGTATTACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR TCA 72 bp | ATGCATAGGACAGACACCTGCCTTCCAGTTTCTGTCTaGACTACAGATGTTTTTCTAATGCATCTTTACATG | + |
|
Preference number: 3 (lower is better) Translates to: MHRTDTCLPVSV*TTDVFLMHLYM Trigger: CATGTAAAGATGCATTAGAAAAACATCTGTAGTTCAGACAGAAACTGGAAGGCAGGTGTCTGTCCTATGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAGAAATGTAAACAGTTTAACACCGACAGGATCCCTCTGCTAGTCCTTATTTCTGTCAGAAACAGGTaGGTCCTTTCAGAAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IKKCKQFNTDRIPLLVLISVRNR*VLSEKL Trigger: AAGCTTTTCTGAAAGGACCAACCTGTTTCTGACAGA...AATAAGGACTAGCAGAGGGATCCTGTCGGTGTTAAACTGTTTACATTTCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CCA 72 bp | TGGATGCATTTTACAGGTAATTCACAAATATCCCAGTaGACACTGAAGCTAAGGCCATTCTGTGAGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: WMHFTGNSQISQ*TLKLRPFCELF Trigger: AAATAACTCACAGAATGGCCTTAGCTTCAGTGTCCACTGGGATATTTGTGAATTACCTGTAAAATGCATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGCGAGCACTTCAGCTCACCTGCACAGGGAGCAGGGAAAGAGTCTGCTGCTGTGGCACCAGAGCTaGAGGTCCTCCTTGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAASTSAHLHREQGKSLLLWHQS*RSSLDV Trigger: CACATCCAAGGAGGACCTTCAGCTCTGGTGCCACAG...CAGCAGACTCTTTCCCTGCTCCCTGTGCAGGTGAGCTGAAGTGCTCGCAGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATGGGGCTCGGTCCTCCTTGGATGTaGGAAGAGAGTCAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQHKRLSVMEGSLPMGLGPPWM*EESQLD Trigger: ATCCAGCTGACTCTCTTCCCACATCCAAGGAGGACC...GAGCCCCATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATCGCTGGACGTGGAAGTaGATCTCCTTGGGAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSAQETISDGGLPANRWTWK*ISLGKS Trigger: AGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCG...ATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAGGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR GCA 90 bp | ACGGGGCTTTCTCAGTGTGCTTGGCAAGATGAGGAAGTCCTTACCAGGTACAGACATGGTCTCCAGCAATaGCACAGGAAGTGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLSQCAWQDEEVLTRYRHGLQQ*HRKCEP Trigger: TGGCTCACACTTCCTGTGGCATTGCTGGAGACCATG...TCTGTACCTGGTAAGGACTTCCTCATCTTGCCAAGCACACTGAGAAAGCCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATCTCTCACACCAAACATaGTCTCCAGCAATGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSAQETISDGGLPANLSHQT*SPAMPQ Trigger: CTGTGGCATTGCTGGAGACCATGTTTGGTGTGAGAG...ATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAGGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATGGGGCTCAACATGCAAGTTCAATaGTTTCCAGTCCACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LTQHKRLSVMEGSLPMGLNMQVQ*FPVHQI Trigger: TATTTGGTGGACTGGAAATCATTGAACTTGCATGTT...GAGCCCCATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CCA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTGCTGAAGGTCCTCCTTaGATGTGGGAAGAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFVLFQSTADPLVLRHHFAEGPP*MWEESQ Trigger: CTGACTCTCTTCCCACATCCAAGGAGGACCTTCAGC...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CAA 72 bp | GCTAGTCCTTATTGTGACTGTTCCAGAGCTTCTTTGTaGGGCTTGAGAGCCGGTGAAATGGAACCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPYCDCSRASL*GLRAGEMEPIC Trigger: GCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAGGACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTTCCAGAGCTTCTTTGTTGGGCTTGAGAGCCGGTGAAATGGAACCAATCTCCTTCCACTTCCTATaGATAAAGATAAAGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCSRASLLGLRAGEMEPISFHFL*IKIKAA Trigger: TGCGGCCTTTATCTTTATTCATAGGAAGTGGAAGGA...GATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCAGGCATGTTTGTTGTAGCTCTAATGGCAGAAGGCAGACACCCTGCACCTTATTATTTTCTGTaGGGTCAGTTCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAGMFVVALMAEGRHPAPYYFL*GQFLLE Trigger: TTCCAGAAGGAACTGACCTCACAGAAAATAATAAGG...TGCAGGGTGTCTGCCTTCTGCCATTAGAGCTACAACAAACATGCCTGCAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCAGGCATGTTTGTTGTAGCTCTAATGGCAGAAGGCAGACACCCTGCAACATACTCATATTTCTaGAGTCCGTTCTTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAGMFVVALMAEGRHPATYSYF*SPFFSA Trigger: TGCTGAGAAGAACGGACTTCAGAAATATGAGTATGT...TGCAGGGTGTCTGCCTTCTGCCATTAGAGCTACAACAAACATGCCTGCAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTTCCAGAGCTTCTTTGTTGGGCTTGAGAGCCGGTGAAATGGAACCAATCTTCCTTCTGGAAAAATaGGAAGCTGTAGTGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCSRASLLGLRAGEMEPIFLLEK*EAVVVH Trigger: ATGAACCACTACAGCTTCTCATTTTTCCAGAAGGAA...GATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGGTTGTGTGTGTGTAACCTTAAAAACTAGGGAGTCAAACAGCTGTGTTGGTGGAACTGTACTCTaGCCAGTAAAGTGGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEGCVCVTLKTRESNSCVGGTVL*PVKWKF Trigger: AAACTTCCACTTTACTGGGCAGAGTACAGTTCCACC...AACACAGCTGTTTGACTCCCTAGTTTTTAAGGTTACACACACACAACCCTCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| 3UTR CAA 72 bp | CCTTATTGTGACTGTTCCAGAGCTTCTTTGTTGGGCTaGAGAGCCGGTGAAATGGAACCAATCTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PYCDCSRASLLG*RAGEMEPICRI Trigger: AATTCTGCAGATTGGTTCCATTTCACCGGCTCTCAAGCCCAACAAAGAAGCTCTGGAACAGTCACAATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTTAAAGCAAGTAGAGTGTCCACATTCTCTAGTTTTAGTGCTGTATTAGGATATGAGCAGGCACATTaGAGAGCAGAACAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKASRVSTFSSFSAVLGYEQAH*RAEQGP Trigger: TGGGCCTTGTTCTGCTCTGCAATGTGCCTGCTCATA...TCCTAATACAGCACTAAAACTAGAGAATGTGGACACTCTACTTGCTTTAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAAGCAAGTAGAGTGTCCACATTCTCTAGTTTTAGTGCTGTATTAGGAGGAAGTGGATCTCCTTaGGAAAGTCTCCAAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKASRVSTFSSFSAVLGGSGSP*ESLQGE Trigger: TTCTCCTTGGAGACTTTCCCAAGGAGATCCACTTCC...TCCTAATACAGCACTAAAACTAGAGAATGTGGACACTCTACTTGCTTTAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTGTCACTGCTTCCAAATGATAGGAATATTTGGCAGACAGTAGGTCAGTGTCCAAATATTCTCTCCTaGAGCACGAAGAACACAATG | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLPNDRNIWQTVGQCPNILS*STKNTM Trigger: CATTGTGTTCTTCGTGCTGCAGGAGAGAATATTTGG...ACACTGACCTACTGTCTGCCAAATATTCCTATCATTTGGAAGCAGTGACAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS CCA 90 bp | GCACCAGAGCTGAAGGTCCTCCTTGGATGTGGGAAGAGAGTCAGCTaGATACCGCTGGACGTGGAAGTGGATCTCCTTGGGAAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: APELKVLLGCGKRVS*IPLDVEVDLLGKVS Trigger: GGAGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATCCAAGGAGGACCTTCAGCTCTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
||
| CDS CCA 90 bp | CTTCCCACCTTCTGTGGCACCAGAGCTGAAGGTCCTCCTTGGATGTaGGAAGAGAGTCAGCTGGATACCGCTGGACGTGGAAGTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTFCGTRAEGPPWM*EESQLDTAGRGSGS Trigger: AGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATCCAAGGAGGACCTTCAGCTCTGGTGCCACAGAAGGTGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
||
| CDS CCA 90 bp | CTCATTAGACAGTTCCACAGGAACATCCAGTCCACACGTGTCCGGTaGTTCATGATGATGACGCTCCGCTCTCCAGGCACAAAGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIRQFHRNIQSTRVR*FMMMTLRSPGTKAS Trigger: TGACGCCTTTGTGCCTGGAGAGCGGAGCGTCATCATCATGAACCACCGGACACGTGTGGACTGGATGTTCCTGTGGAACTGTCTAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTCAGCACAAGAGACTATCAGTGATGGAGGGCTCCCTGCCAATGGGGCTCAATCCAGGAACACTTTaGAGACTGGATTTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTQHKRLSVMEGSLPMGLNPGTL*RLDLRQ Trigger: TTGCCTCAAATCCAGTCTCAAAAGTGTTCCTGGATT...GAGCCCCATTGGCAGGGAGCCCTCCATCACTGATAGTCTCTTGTGCTGAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACTCATCACCCAGCCTCTATATCGGTTCATATTTTAGGGTGAAATGGTTCGATAAAGGCCGCAACTaGCATGGCCCAGCCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSSPSLYIGSYFRVKWFDKGRN*HGPAES Trigger: GGATTCGGCTGGGCCATGCAAGTTGCGGCCTTTATC...GAACCATTTCACCCTAAAATATGAACCGATATAGAGGCTGGGTGATGAGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS TCA 90 bp | GAAGGTGCTTCTCAGTTTGAGGGATGTTGTAAGGATATGCGACCGTaGTGTCATGAACAGCATCGAGGTTCTTCCCTTCTCTTAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGASQFEGCCKDMRP*CHEQHRGSSLLLGG Trigger: ACCGCCTAAGAGAAGGGAAGAACCTCGATGCTGTTCATGACATCACGGTCGCATATCCTTACAACATCCCTCAAACTGAGAAGCACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
||
| CDS GCA 90 bp | TCCAAGGAGAAGGTGCTTCTCAGTTTGAGGGATGTTGTAAGGATATaGGACCGTGATGTCATGAACAGCATCGAGGTTCTTCCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKEKVLLSLRDVVRI*DRDVMNSIEVLPFS Trigger: AGAGAAGGGAAGAACCTCGATGCTGTTCATGACATCACGGTCGCATATCCTTACAACATCCCTCAAACTGAGAAGCACCTTCTCCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTCTTTTGAGACTGGATTaGAGGCAAATCTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RFVLFQSTADPLVLRHHFLLRLD*RQIFST Trigger: GGTGGAGAAGATTTGCCTCAAATCCAGTCTCAAAAG...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTCTCGCAGATAGATATGTTTCTACTTCATTTTCAGTCTCTCCCGCCATGGAAGTTTTTCTCTCCTaGGTAGAAGGACCGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EALADRYVSTSFSVSPAMEVFLS*VEGPKP Trigger: AGGCTTCGGTCCTTCTACCAAGGAGAGAAAAACTTC...CATGGCGGGAGAGACTGAAAATGAAGTAGAAACATATCTATCTGCGAGAGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTGTTTTGTTTCAGTCAACCGCTGACCCACTGGTATTGAGGCACCACTTTAAGGTGCTTCTCAGTTaGAGGGATGTTGTAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RFVLFQSTADPLVLRHHFKVLLS*RDVVRI Trigger: TATCCTTACAACATCCCTCAAACTGAGAAGCACCTT...AAAGTGGTGCCTCAATACCAGTGGGTCAGCGGTTGACTGAAACAAAACAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGTCACTGCTTCCAAATGATAGGAATATTTGGCAGACAGTAGGTCAGTGTACTCTGAGCTCAGACTaGCAAGGTGGAACTGTACTC | + |
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Preference number: 5 (lower is better) Translates to: MLSLLPNDRNIWQTVGQCTLSSD*QGGTVL Trigger: GAGTACAGTTCCACCTTGCAAGTCTGAGCTCAGAGT...ACACTGACCTACTGTCTGCCAAATATTCCTATCATTTGGAAGCAGTGACAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| CDS TCA 90 bp | TCAATCATGTCTTCAAAATGGCTCTTATCATCCTTCCACTTCCTATaGATAAAGATAAAGGCCGCAACTTGCATGGCCCAGCCGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: SIMSSKWLLSSFHFL*IKIKAATCMAQPNP Trigger: TGGATTCGGCTGGGCCATGCAAGTTGCGGCCTTTATCTTTATTCATAGGAAGTGGAAGGATGATAAGAGCCATTTTGAAGACATGATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
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| CDS-3UTR CAA 90 bp | CCATTTTATTCTGGATGCATTTTACAGGTAATTCACAAATATCCCAGTGGACACTGGAAGTGGATCTCCTaGGGAAAGTCTCCAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PFYSGCILQVIHKYPSGHWKWIS*GKSPRR Trigger: TCTCCTTGGAGACTTTCCCAAGGAGATCCACTTCCA...GTGTCCACTGGGATATTTGTGAATTACCTGTAAAATGCATCCAGAATAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067545.8 |
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| CDS TCA 90 bp | AAGGTAAAGCCAGTGGTTCTTGGGTGTAAAACATACTCATATTTCTaGAGTCCGTTCTTCTCAGCAAAATCATTACTCCTAGCCTTATTA | + |
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Preference number: 5 (lower is better) Translates to: KVKPVVLGCKTYSYF*SPFFSAKSLLLALL Trigger: TAATAAGGCTAGGAGTAATGATTTTGCTGAGAAGAACGGACTTCAGAAATATGAGTATGTTTTACACCCAAGAACCACTGGCTTTACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | CAGTTCCACAGGAACATCCAGTCCACACGTGTCCGGTaGTTCATGATGATGACGCTCCGCTCTCCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: QFHRNIQSTRVR*FMMMTLRSPGT Trigger: TGTGCCTGGAGAGCGGAGCGTCATCATCATGAACCACCGGACACGTGTGGACTGGATGTTCCTGTGGAACTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | CTGAAGGTCCTCCTTGGATGTGGGAAGAGAGTCAGCTaGATACCGCTGGACGTGGAAGTGGATCTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LKVLLGCGKRVS*IPLDVEVDLLG Trigger: CCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATCCAAGGAGGACCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | TTCTGTGGCACCAGAGCTGAAGGTCCTCCTTGGATGTaGGAAGAGAGTCAGCTGGATACCGCTGGACGTGGA | + |
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Preference number: 6 (lower is better) Translates to: FCGTRAEGPPWM*EESQLDTAGRG Trigger: TCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATCCAAGGAGGACCTTCAGCTCTGGTGCCACAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | GGAAGAGAGTCAGCTGGATACCGCTGGACGTGGAAGTaGATCTCCTTGGGAAAGTCTCCAAGGAGAAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRESAGYRWTWK*ISLGKSPRRRC Trigger: GCACCTTCTCCTTGGAGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | GATGTGGGAAGAGAGTCAGCTGGATACCGCTGGACGTaGAAGTGGATCTCCTTGGGAAAGTCTCCAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DVGRESAGYRWT*KWISLGKSPRR Trigger: TCTCCTTGGAGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | TCCTTGGATGTGGGAAGAGAGTCAGCTGGATACCGCTaGACGTGGAAGTGGATCTCCTTGGGAAAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLDVGRESAGYR*TWKWISLGKSP Trigger: TGGAGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTGACTCTCTTCCCACATCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | CAGCTGGATACCGCTGGACGTGGAAGTGGATCTCCTTaGGAAAGTCTCCAAGGAGAAGGTGCTTCTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QLDTAGRGSGSP*ESLQGEGASQF Trigger: AAACTGAGAAGCACCTTCTCCTTGGAGACTTTCCCAAGGAGATCCACTTCCACGTCCAGCGGTATCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS GCA 72 bp | CCGAACAGGGCTGTACAGATATATGAGCAGGCACATTaGAGAGCAGAACAAGGCCCAGTACACTATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PNRAVQIYEQAH*RAEQGPVHYGQ Trigger: CTGTCCATAGTGTACTGGGCCTTGTTCTGCTCTGCAATGTGCCTGCTCATATATCTGTACAGCCCTGTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CAA 72 bp | GACAGTAGCTTGACCACAAGGACTCTGAGCTCAGACTaGCAAGGTGGAACTGTACTCTGCCCAGTAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: DSSLTTRTLSSD*QGGTVLCPVKW Trigger: CCACTTTACTGGGCAGAGTACAGTTCCACCTTGCAAGTCTGAGCTCAGAGTCCTTGTGGTCAAGCTACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CAA 72 bp | GAGCAGAACAAGGCCCAGTACACTATGGACAGTAGCTaGACCACAAGGACTCTGAGCTCAGACTTGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: EQNKAQYTMDSS*TTRTLSSDLQG Trigger: ACCTTGCAAGTCTGAGCTCAGAGTCCTTGTGGTCAAGCTACTGTCCATAGTGTACTGGGCCTTGTTCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CAA 90 bp | CACATTGCAGAGCAGAACAAGGCCCAGTACACTATGGACAGTAGCTaGACCACAAGGACTCTGAGCTCAGACTTGCAAGGTGGAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: HIAEQNKAQYTMDSS*TTRTLSSDLQGGTV Trigger: TACAGTTCCACCTTGCAAGTCTGAGCTCAGAGTCCTTGTGGTCAAGCTACTGTCCATAGTGTACTGGGCCTTGTTCTGCTCTGCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CAA 90 bp | TACACTATGGACAGTAGCTTGACCACAAGGACTCTGAGCTCAGACTaGCAAGGTGGAACTGTACTCTGCCCAGTAAAGTGGAAGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: YTMDSSLTTRTLSSD*QGGTVLCPVKWKFF Trigger: GAAAAACTTCCACTTTACTGGGCAGAGTACAGTTCCACCTTGCAAGTCTGAGCTCAGAGTCCTTGTGGTCAAGCTACTGTCCATAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CCA 72 bp | CTTGACCACAAGGACTCTGAGCTCAGACTTGCAAGGTaGAACTGTACTCTGCCCAGTAAAGTGGAAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LDHKDSELRLAR*NCTLPSKVEVF Trigger: AAAAACTTCCACTTTACTGGGCAGAGTACAGTTCCACCTTGCAAGTCTGAGCTCAGAGTCCTTGTGGTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS CAA 72 bp | CTTCCACTTCCTATGAATAAAGATAAAGGCCGCAACTaGCATGGCCCAGCCGAATCCAGGAACACTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLPMNKDKGRN*HGPAESRNTFE Trigger: CTCAAAAGTGTTCCTGGATTCGGCTGGGCCATGCAAGTTGCGGCCTTTATCTTTATTCATAGGAAGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
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| CDS GCA 72 bp | AAGGTGCTTCTCAGTTTGAGGGATGTTGTAAGGATATaGGACCGTGATGTCATGAACAGCATCGAGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVLLSLRDVVRI*DRDVMNSIEVL Trigger: AAGAACCTCGATGCTGTTCATGACATCACGGTCGCATATCCTTACAACATCCCTCAAACTGAGAAGCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067545.8 ENSMUST00000232703.2 |
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| CDS TCA 72 bp | TCTTCAAAATGGCTCTTATCATCCTTCCACTTCCTATaGATAAAGATAAAGGCCGCAACTTGCATGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKWLLSSFHFL*IKIKAATCMAQ Trigger: CTGGGCCATGCAAGTTGCGGCCTTTATCTTTATTCATAGGAAGTGGAAGGATGATAAGAGCCATTTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067545.8 ENSMUST00000149064.9 ENSMUST00000232703.2 |
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