Pregenerated sensors for LCE3E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074433

Ensembl transcript IDs: ENSMUST00000098886.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CCAGACAACAGACAGGAAGAGAAGTTACTAGGGAAGTTGAAACTCTaGATAGAAGAAGTCAGCAGGGCCCCTGGGAATGGAAAAGACGGG	+
Preference number: 1 (lower is better) Translates to: PDNRQEEKLLGKLKL*IEEVSRAPGNGKDG Trigger: CCCGTCTTTTCCATTCCCAGGGGCCCTGCTGACTTCTTCTATCCAGAGTTTCAACTTCCCTAGTAACTTCTCTTCCTGTCTGTTGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098886.5
CDS-3UTR TCA 90 bp	CCCTGGGAATGGAAAAGACGGGCTGAATTTTCCTTGGCTCCTGAGATTCTTTTTGCTGTGGCTGCAGCCTaGACCCCCAGACTGCTGACC	+
Preference number: 4 (lower is better) Translates to: PWEWKRRAEFSLAPEILFAVAAA*TPRLLT Trigger: GGTCAGCAGTCTGGGGGTTCAGGCTGCAGCCACAGC...AAAAAGAATCTCAGGAGCCAAGGAAAATTCAGCCCGTCTTTTCCATTCCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000098886.5
CDS-3UTR GCA 90 bp	AAGTTGAAACTCTGGATAGAAGAAGTCAGCAGGGCCCCTGGGAATGGAAAAGACAGGAACTGGAGCTCCTaGGCCTGCATCTGTGGGACC	+
Preference number: 4 (lower is better) Translates to: KLKLWIEEVSRAPGNGKDRNWSS*ACICGT Trigger: GGTCCCACAGATGCAGGCGCAGGAGCTCCAGTTCCT...GTCTTTTCCATTCCCAGGGGCCCTGCTGACTTCTTCTATCCAGAGTTTCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098886.5

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