RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCAT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035237

Ensembl transcript IDs: ENSMUST00000038896.8

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGGGCTGCGACTGGCGGCCCTGCCACTGGCCACAGAGCTCAGTGCTaGGGGTGGCTACGGTGTCGTCCCCATCTTCATAGAGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RAATGGPATGHRAQC*GWLRCRPHLHRVQP
Trigger: TGGCTGCACTCTATGAAGATGGGGACGACACCGTAGCCACCCGCAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 90 bp GTCTCGTTCATGGGCAGCAAATGTACGGGCTGCGACTGGCGGCCCTaGCACTGGCCACAGAGCTCAGTGCTGCGGGTGGCTACGGTGTCG +
Preference number: 5 (lower is better)
Translates to: VSFMGSKCTGCDWRP*HWPQSSVLRVATVS
Trigger: CGACACCGTAGCCACCCGCAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCGTACATTTGCTGCCCATGAACGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 90 bp TTCATGGGCAGCAAATGTACGGGCTGCGACTGGCGGCCCTGCCACTaGCCACAGAGCTCAGTGCTGCGGGTGGCTACGGTGTCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: FMGSKCTGCDWRPCH*PQSSVLRVATVSSP
Trigger: TGGGGACGACACCGTAGCCACCCGCAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCGTACATTTGCTGCCCATGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp TTTCAGCTTTATGTTGGACAGGATGGGGATGCCCTGGTTGTCACCTaGGGCCAGGATCCGCATGGCCTTGATGGAACCACCCCACGGAGC +
Preference number: 5 (lower is better)
Translates to: FQLYVGQDGDALVVT*GQDPHGLDGTTPRS
Trigger: GCTCCGTGGGGTGGTTCCATCAAGGCCATGCGGATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 90 bp GTAGTATTCATCCTGCTGGTGGGGTGCCAGACGCCAGTCATAGGGTaGGGCCCGCACTGTCTCATCCCGCACATATCCGTTGTTAACCAG +
Preference number: 5 (lower is better)
Translates to: VVFILLVGCQTPVIG*GPHCLIPHISVVNQ
Trigger: CTGGTTAACAACGGATATGTGCGGGATGAGACAGTGCGGGCCGCACCCTATGACTGGCGTCTGGCACCCCACCAGCAGGATGAATACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 90 bp CTTCAGGCCACACGTGAGGGGCTGGGAGCATCCAGGGGGAAGTCGTaGTTATGCGCTGCTCCTCTTTCAGCTTTATGTTGGACAGGATGG +
Preference number: 5 (lower is better)
Translates to: LQATREGLGASRGKS*LCAAPLSALCWTGW
Trigger: CCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGACTTCCCCCTGGATGCTCCCAGCCCCTCACGTGTGGCCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 90 bp TCGTGGTTATGCGCTGCTCCTCTTTCAGCTTTATGTTGGACAGGATaGGGATGCCCTGGTTGTCACCTGAGGCCAGGATCCGCATGGCCT +
Preference number: 5 (lower is better)
Translates to: SWLCAAPLSALCWTG*GCPGCHLRPGSAWP
Trigger: AGGCCATGCGGATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 90 bp AGGGGGAAGTCGTGGTTATGCGCTGCTCCTCTTTCAGCTTTATGTTaGACAGGATGGGGATGCCCTGGTTGTCACCTGAGGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: RGKSWLCAAPLSALC*TGWGCPGCHLRPGS
Trigger: GGATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGACTTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp TTGAAGTTTGGTGTGGAAATGAACACATGGTCTTCAGGCCACACGTaGGGGGCTGGGAGCATCCAGGGGGAAGTCGTGGTTATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LKFGVEMNTWSSGHT*GAGSIQGEVVVMRC
Trigger: GCAGCGCATAACCACGACTTCCCCCTGGATGCTCCCAGCCCCTCACGTGTGGCCTGAAGACCATGTGTTCATTTCCACACCAAACTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp GCCCCGAGAGAGATAAAACCATCAATGAAGTGGTCCTTCCAGGACTaGGGCTGCCGCAGTAAGAAGTGGAGCACATGCAGACAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: APREIKPSMKWSFQD*GCRSKKWSTCRQPR
Trigger: CCTTGGCTGTCTGCATGTGCTCCACTTCTTACTGCGGCAGCCTCAGTCCTGGAAGGACCACTTCATTGATGGTTTTATCTCTCTCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp GCAGTAAGAAGTGGAGCACATGCAGACAGCCAAGGCTATGCCCAATaGGGAAGACAGGCTTCCCATAAGCGGCATACATCTCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: AVRSGAHADSQGYAQ*GRQASHKRHTSPLP
Trigger: TGGTAGAGGAGATGTATGCCGCTTATGGGAAGCCTGTCTTCCTCATTGGGCATAGCCTTGGCTGTCTGCATGTGCTCCACTTCTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp ACTTCTACACCAGGTGCGGGGAGGCGCTCCAGTAGGTCACGAGACTaGAGAAACATGTGCCAGCCTTCTTCAAAATGCAGATCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TSTPGAGRRSSRSRD*RNMCQPSSKCRSVK
Trigger: TTTCACAGATCTGCATTTTGAAGAAGGCTGGCACATGTTTCTTCAGTCTCGTGACCTACTGGAGCGCCTCCCCGCACCTGGTGTAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 90 bp GCATTGATATGCTCCAGTGTCTTATTGCTGAAGACCATGTTGAGGTaGTCTGTCTCGTTCATGGGCAGCAAATGTACGGGCTGCGACTGG +
Preference number: 5 (lower is better)
Translates to: ALICSSVLLLKTMLR*SVSFMGSKCTGCDW
Trigger: CCAGTCGCAGCCCGTACATTTGCTGCCCATGAACGAGACAGATCACCTCAACATGGTCTTCAGCAATAAGACACTGGAGCATATCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 72 bp ATGGGCAGCAAATGTACGGGCTGCGACTGGCGGCCCTaGCACTGGCCACAGAGCTCAGTGCTGCGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: MGSKCTGCDWRP*HWPQSSVLRVA
Trigger: AGCCACCCGCAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCGTACATTTGCTGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp AGCAAATGTACGGGCTGCGACTGGCGGCCCTGCCACTaGCCACAGAGCTCAGTGCTGCGGGTGGCTACGGTG +
Preference number: 6 (lower is better)
Translates to: SKCTGCDWRPCH*PQSSVLRVATV
Trigger: CACCGTAGCCACCCGCAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCGTACATTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp CCCAAGCAGCCAGGCACGAGGATGACAGGCCGTGTGTaGTTACTGAGTTCAGCCTTGGGCGTGGTGTGCGGG +
Preference number: 6 (lower is better)
Translates to: PKQPGTRMTGRV*LLSSALGVVCG
Trigger: CCCGCACACCACGCCCAAGGCTGAACTCAGTAACCACACACGGCCTGTCATCCTCGTGCCTGGCTGCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp GTCTCGTTCATGGGCAGCAAATGTACGGGCTGCGACTaGCGGCCCTGCCACTGGCCACAGAGCTCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: VSFMGSKCTGCD*RPCHWPQSSVL
Trigger: CAGCACTGAGCTCTGTGGCCAGTGGCAGGGCCGCCAGTCGCAGCCCGTACATTTGCTGCCCATGAACGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 72 bp ATCCTGCTGGTGGGGTGCCAGACGCCAGTCATAGGGTaGGGCCCGCACTGTCTCATCCCGCACATATCCGTT +
Preference number: 6 (lower is better)
Translates to: ILLVGCQTPVIG*GPHCLIPHISV
Trigger: AACGGATATGTGCGGGATGAGACAGTGCGGGCCGCACCCTATGACTGGCGTCTGGCACCCCACCAGCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CAA 72 bp CCCTGGTTGTCACCTGAGGCCAGGATCCGCATGGCCTaGATGGAACCACCCCACGGAGCCCCGAGAGAGATA +
Preference number: 6 (lower is better)
Translates to: PWLSPEARIRMA*MEPPHGAPREI
Trigger: TATCTCTCTCGGGGCTCCGTGGGGTGGTTCCATCAAGGCCATGCGGATCCTGGCCTCAGGTGACAACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp CAAAGCCAGGGACACGGATCTGGACACCAGGGGCATTaGACACGCGCCCAGAGCTGTGGTTGTAGACAATCC +
Preference number: 6 (lower is better)
Translates to: QSQGHGSGHQGH*TRAQSCGCRQS
Trigger: GGATTGTCTACAACCACAGCTCTGGGCGCGTGTCCAATGCCCCTGGTGTCCAGATCCGTGTCCCTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 72 bp TATGTTGGACAGGATGGGGATGCCCTGGTTGTCACCTaGGGCCAGGATCCGCATGGCCTTGATGGAACCACC +
Preference number: 6 (lower is better)
Translates to: YVGQDGDALVVT*GQDPHGLDGTT
Trigger: GGTGGTTCCATCAAGGCCATGCGGATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CAA 90 bp CAGGGGGAAGTCGTGGTTATGCGCTGCTCCTCTTTCAGCTTTATGTaGGACAGGATGGGGATGCCCTGGTTGTCACCTGAGGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: QGEVVVMRCSSFSFM*DRMGMPWLSPEARI
Trigger: GATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGACTTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 72 bp GCTGGGAGCATCCAGGGGGAAGTCGTGGTTATGCGCTaGTCCTCTTTCAGCTTTATGTTGGACAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: AGSIQGEVVVMR*SSFSFMLDRMG
Trigger: CCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGACTTCCCCCTGGATGCTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 72 bp GAGGGGCTGGGAGCATCCAGGGGGAAGTCGTGGTTATaGGCTGCTCCTCTTTCAGCTTTATGTTGGACAGGA +
Preference number: 6 (lower is better)
Translates to: EGLGASRGKSWL*AAPLSALCWTG
Trigger: TCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGACTTCCCCCTGGATGCTCCCAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp TGCGCTGCTCCTCTTTCAGCTTTATGTTGGACAGGATaGGGATGCCCTGGTTGTCACCTGAGGCCAGGATCC +
Preference number: 6 (lower is better)
Translates to: CAAPLSALCWTG*GCPGCHLRPGS
Trigger: GGATCCTGGCCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 72 bp CCAGGTGCGGGGAGGCGCTCCAGTAGGTCACGAGACTaGAGAAACATGTGCCAGCCTTCTTCAAAATGCAGA +
Preference number: 6 (lower is better)
Translates to: PGAGRRSSRSRD*RNMCQPSSKCR
Trigger: TCTGCATTTTGAAGAAGGCTGGCACATGTTTCTTCAGTCTCGTGACCTACTGGAGCGCCTCCCCGCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS GCA 72 bp GCTTGTTGTCATCCACGTACTCAACAGATTCGGTCTTaGCAAAGCCAGGGACACGGATCTGGACACCAGGGG +
Preference number: 6 (lower is better)
Translates to: ACCHPRTQQIRS*QSQGHGSGHQG
Trigger: CCCCTGGTGTCCAGATCCGTGTCCCTGGCTTTGGCAAGACCGAATCTGTTGAGTACGTGGATGACAACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp AGCACATCCAGTTCACCACATCTGGTTTATCCAGCTTaGCTTCTAGCCGATTCCCCAAGCAGCCAGGCACGA +
Preference number: 6 (lower is better)
Translates to: STSSSPHLVYPA*LLADSPSSQAR
Trigger: TCGTGCCTGGCTGCTTGGGGAATCGGCTAGAAGCCAAGCTGGATAAACCAGATGTGGTGAACTGGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp TCGTGGTTATGCGCTGCTCCTCTTTCAGCTTTATGTTaGACAGGATGGGGATGCCCTGGTTGTCACCTGAGG +
Preference number: 6 (lower is better)
Translates to: SWLCAAPLSALC*TGWGCPGCHLR
Trigger: CCTCAGGTGACAACCAGGGCATCCCCATCCTGTCCAACATAAAGCTGAAAGAGGAGCAGCGCATAACCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CAA 72 bp AGCTTGTTGTCATCCACGTACTCAACAGATTCGGTCTaGCCAAAGCCAGGGACACGGATCTGGACACCAGGG +
Preference number: 6 (lower is better)
Translates to: SLLSSTYSTDSV*PKPGTRIWTPG
Trigger: CCCTGGTGTCCAGATCCGTGTCCCTGGCTTTGGCAAGACCGAATCTGTTGAGTACGTGGATGACAACAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 72 bp AGTGGAGCACATGCAGACAGCCAAGGCTATGCCCAATaGGGAAGACAGGCTTCCCATAAGCGGCATACATCT +
Preference number: 6 (lower is better)
Translates to: SGAHADSQGYAQ*GRQASHKRHTS
Trigger: AGATGTATGCCGCTTATGGGAAGCCTGTCTTCCTCATTGGGCATAGCCTTGGCTGTCTGCATGTGCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS TCA 72 bp TGCTCCAGTGTCTTATTGCTGAAGACCATGTTGAGGTaGTCTGTCTCGTTCATGGGCAGCAAATGTACGGGC +
Preference number: 6 (lower is better)
Translates to: CSSVLLLKTMLR*SVSFMGSKCTG
Trigger: GCCCGTACATTTGCTGCCCATGAACGAGACAGATCACCTCAACATGGTCTTCAGCAATAAGACACTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8
CDS CCA 72 bp AAAACGCTCAAAGTCTTGGACGGTGTAGTTGAAGTTTaGTGTGGAAATGAACACATGGTCTTCAGGCCACAC +
Preference number: 6 (lower is better)
Translates to: KTLKVLDGVVEV*CGNEHMVFRPH
Trigger: GTGTGGCCTGAAGACCATGTGTTCATTTCCACACCAAACTTCAACTACACCGTCCAAGACTTTGAGCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038896.8