Pregenerated sensors for LCA5L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045275

Ensembl transcript IDs: ENSMUST00000054855.14, ENSMUST00000113804.8, ENSMUST00000233151.2

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	AGTTGTGCCGGCCAGCAGCCTTGCTGGCAGAATTTATaGGCCTTAGGCTGGCCAAGAATCGCTGAGTCCCAG	+
Preference number: 3 (lower is better) Translates to: SCAGQQPCWQNL*ALGWPRIAESQ Trigger: CTGGGACTCAGCGATTCTTGGCCAGCCTAAGGCGCATAAATTCTGCCAGCAAGGCTGCTGGCCGGCACAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
3UTR-3UTR CAA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGATGCCGGCCAGCAGCCTaGCTGGCAGAATTTATGCGC	+
Preference number: 3 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRCRPAA*LAEFMR Trigger: GCGCATAAATTCTGCCAGCAAGGCTGCTGGCCGGCA...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
3UTR CAA 72 bp	AGTACCTCTTCCGTGCAGTTGTGCCGGCCAGCAGCCTaGCTGGCAGAATTTATGCGCCTTAGGCTGGCCAAG	+
Preference number: 4 (lower is better) Translates to: STSSVQLCRPAA*LAEFMRLRLAK Trigger: CTTGGCCAGCCTAAGGCGCATAAATTCTGCCAGCAAGGCTGCTGGCCGGCACAACTGCACGGAAGAGGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	AAAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCCCGAAACCTGCCTaGAGGAGGTGGGCAGCCCGT	+
Preference number: 4 (lower is better) Translates to: KNTDFYTGAGAHKGRPLRCPKPA*RRWAAR Trigger: ACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCA...TCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTGGGCGAGGCCTGGATaGACCCCGCCACGGTGGCTC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAWARPG*TPPRWL Trigger: GAGCCACCGTGGCGGGGTCCATCCAGGCCTCGCCCA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	ATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCTCGAACAGCTCCTCCATaGGGCTGCTCTTTCTGTCGC	+
Preference number: 4 (lower is better) Translates to: IQTSIQAQGHTKAGHLDARTAPP*GCSFCR Trigger: GCGACAGAAAGAGCAGCCTCATGGAGGAGCTGTTCG...AGCATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACCCGGGCAGCTCCTGTaGCCCGACCACCTCTTGCGC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAPGQLL*PDHLLR Trigger: GCGCAAGAGGTGGTCGGGGCACAGGAGCTGCCCGGG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGCCTCGCCCGCCCCGTaGACCTCGTCCGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAASPAP*TSSASS Trigger: AGATGAGGCGGACGAGGTGCACGGGGCGGGCGAGGC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTGGCTGTTCTGGGACTaGCCACCAGCGCCAGGGCTA	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDWLFWD*PPAPGL Trigger: TAGCCCTGGCGCTGGTGGCCAGTCCCAGAACAGCCA...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGGGCGAGGCCTGGATaGACCCCGCCACGGTGGCTC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAWARPG*TPPRWL Trigger: GAGCCACCGTGGCGGGGTCCATCCAGGCCTCGCCCA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGGGCTGCCCGAAACCTaGCTGCAGGAGGTGGGCAGC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAGLPET*LQEVGS Trigger: GCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCGGGGACTTGCTGACTaGCTCGCTGTCGCTGGAGCC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSARGLAD*LAVAGA Trigger: GGCTCCAGCGACAGCGAGGCAGTCAGCAAGTCCCCG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACCTGCCTGCAGGAGGTaGGCAGCCCGTGGTGCAGGT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAPACRR*AARGAG Trigger: ACCTGCACCACGGGCTGCCCACCTCCTGCAGGCAGG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGGGCTGCCCGAAACCTaGCTGCAGGAGGTGGGCAGC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVGLPET*LQEVGS Trigger: GCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACGGGGACTTGCTGACTaGCTCGCTGTCGCTGGAGCC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHARGLAD*LAVAGA Trigger: GGCTCCAGCGACAGCGAGGCAGTCAGCAAGTCCCCG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATAGAGGCTTCTCTGACTaGAGTCTCCTGACGGCCGTC	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDRGFSD*SLLTAV Trigger: GACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCT...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	ATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCTTGGCTCTGCCTCTGCTaGGATGGCTCTCTTTTCTTG	+
Preference number: 4 (lower is better) Translates to: IQTSIQAQGHTKAGHLDAWLCLC*DGSLFL Trigger: CAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCA...AGCATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTCCTCGGCGTCCTTGTaGGCCTCGCTTTCCTTTGCA	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDSSASL*ASLSFA Trigger: TGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGA...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	AAAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGAGAGAAGTCAGGCTTGTaGAGGAGCACTGAGACCTGC	+
Preference number: 4 (lower is better) Translates to: KNTDFYTGAGAHKGRPLREKSGL*RSTETC Trigger: GCAGGTCTCAGTGCTCCTGCACAAGCCTGACTTCTC...TCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGCCCCGACCACCTCTTaGGCTCCGACCACTTTGTGC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAAPTTS*APTTLC Trigger: GCACAAAGTGGTCGGAGCGCAAGAGGTGGTCGGGGC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTGCCCGAAACCTGCCTaGAGGAGGTGGGCAGCCCGT	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVCPKPA*RRWAAR Trigger: ACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGCTGGGATGTCCTTCTaGCCTCTAGGCTGGGGGAGT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAAGMSF*PLGWGS Trigger: ACTCCCCCAGCCTAGAGGCCAGAAGGACATCCCAGC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGCCAGAGGCTTCTCTaGCTGGAGTCTCCTGACGGC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHACQRLL*LESPDG Trigger: GCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	ATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCTGTCTTTGTTGCTGTTTaGGCTGCTAACGTCTTCCGA	+
Preference number: 4 (lower is better) Translates to: IQTSIQAQGHTKAGHLDAVFVAV*AANVFR Trigger: TCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGAC...AGCATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGGCCTCGCTTTCCTTTaGAGTTGGCTCTGCCTCTGC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAGLAFL*SWLCLC Trigger: GCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGCCCCGACCACCTCTTaGGCTCCGACCACTTTGTGC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVAPTTS*APTTLC Trigger: GCACAAAGTGGTCGGAGCGCAAGAGGTGGTCGGGGC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTGGCTGTTCTGGGACTaGCCACCAGCGCCAGGGCTA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVWLFWD*PPAPGL Trigger: TAGCCCTGGCGCTGGTGGCCAGTCCCAGAACAGCCA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGCTCGCTCCTTCTCCTaGGATTTCCGGAGGAGCTGT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAARSFS*DFRRSC Trigger: ACAGCTCCTCCGGAAATCCCAGGAGAAGGAGCGAGC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCAACAGTCTTCCTGTTaGCTTCGGTGGGCGAGGCCT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAQQSSC*LRWARP Trigger: AGGCCTCGCCCACCGAAGCCAACAGGAAGACTGTTG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTGCCAGAGGCTTCTCTaGCTGGAGTCTCCTGACGGC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVCQRLL*LESPDG Trigger: GCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACGAACAGCTCCTCCATaGGGCTGCTCTTTCTGTCGC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHARTAPP*GCSFCR Trigger: GCGACAGAAAGAGCAGCCTCATGGAGGAGCTGTTCG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGAGAAGTCAGGCTTGTaGAGGAGCACTGAGACCTGC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAEKSGL*RSTETC Trigger: GCAGGTCTCAGTGCTCCTGCACAAGCCTGACTTCTC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTCCTTAAGCTTCTGCTaGAGCTGTCTCACTTCTGCC	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDSLSFC*SCLTSA Trigger: GGCAGAAGTGAGACAGCTGCAGCAGAAGCTTAAGGA...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCTTTGCAGTTGGCTCTaGCTCTGCTGGGATGGCTCT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSALCSWL*LCWDGS Trigger: AGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCAATCCACGCTCCCATTaGAAGCCTGGCTGTTCTGGG	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSANPRSH*KPGCSG Trigger: CCCAGAACAGCCAGGCTTCCAATGGGAGCGTGGATT...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCAGTCCCCAGGAAGCTaGAGGAGATGGCATGCTCTT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAQSPGS*RRWHAL Trigger: AAGAGCATGCCATCTCCTCCAGCTTCCTGGGGACTG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATCTGCCTCTGCTGGGATaGCTCTCTTTTCTTGGTCTT	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDLPLLG*LSFLGL Trigger: AAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAG...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATCCTCGGCGTCCTTGTaGGCCTCGCTTTCCTTTGCA	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHASSASL*ASLSFA Trigger: TGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	AAAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATCTGGTGCTTGGCTGTaGTTTGAGGTAGGTTGTTCT	+
Preference number: 4 (lower is better) Translates to: KNTDFYTGAGAHKGRPLRSGAWL*FEVGCS Trigger: AGAACAACCTACCTCAAATCACAGCCAAGCACCAGA...TCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCAGTTGGCTCTGCCTCTaGTGGGATGGCTCTCTTTTC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSASWLCL*WDGSLF Trigger: GAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACT...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTTGCTTTTTCTCAGCTaGGATGTCCTTCTGGCCTCT	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDLLFLS*DVLLAS Trigger: AGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAA...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR TCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTCGTATAGATGTTTTTaGTCTCCAGCTCACGGTCCT	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDSYRCF*SPAHGP Trigger: AGGACCGTGAGCTGGAGATCAAAAACATCTATACGA...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTCCTTAAGCTTCTGCTaGAGCTGTCTCACTTCTGCC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSASLSFC*SCLTSA Trigger: GGCAGAAGTGAGACAGCTGCAGCAGAAGCTTAAGGA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTAATCCACGCTCCCATTaGAAGCCTGGCTGTTCTGGG	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVNPRSH*KPGCSG Trigger: CCCAGAACAGCCAGGCTTCCAATGGGAGCGTGGATT...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCTTGCAAGACGTCTTTaGTCCTCAGTAACTCGCCGT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSALARRL*SSVTRR Trigger: ACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCAGTCCCCAGGAAGCTaGAGGAGATGGCATGCTCTT	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVQSPGS*RRWHAL Trigger: AAGAGCATGCCATCTCCTCCAGCTTCCTGGGGACTG...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCTGCCTCTGCTGGGATaGCTCTCTTTTCTTGGTCTT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSALPLLG*LSFLGL Trigger: AAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGGCTCTGCCTCTGCTaGGATGGCTCTCTTTTCTTG	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAWLCLC*DGSLFL Trigger: CAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	ATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCTGTTGATTTTTCTTTATaGGCAATGTTTCCTTTCCCC	+
Preference number: 4 (lower is better) Translates to: IQTSIQAQGHTKAGHLDAVDFSL*AMFPFP Trigger: GGGGAAAGGAAACATTGCTCATAAAGAAAAATCAAC...AGCATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTAGTCTCTGCAGGGCTTaGAAGACGTCTTTGGTCCTC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSLCRA*KTSLVL Trigger: GAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACT...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATCTTCTGAGAGTCTCTaGAGGGCTTGCAAGACGTCT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHASSESL*RACKTS Trigger: AGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTAGTTGGCTCTGCCTCTaGTGGGATGGCTCTCTTTTC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSWLCL*WDGSLF Trigger: GAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACT...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGAGCTGGGATGTCCTTCTaGCCTCTAGGCTGGGGGAGT	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRAGMSF*PLGWGS Trigger: ACTCCCCCAGCCTAGAGGCCAGAAGGACATCCCAGC...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACTTGCAAGACGTCTTTaGTCCTCAGTAACTCGCCGT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHALARRL*SSVTRR Trigger: ACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	AAAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATTCCTTATTCTCTTTTaGCCTCCTAGGAGTTTCCAG	+
Preference number: 4 (lower is better) Translates to: KNTDFYTGAGAHKGRPLRFLILF*PPRSFQ Trigger: CTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAA...TCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR TCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATCTGGTGCTTGGCTGTaGTTTGAGGTAGGTTGTTCT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHASGAWL*FEVGCS Trigger: AGAACAACCTACCTCAAATCACAGCCAAGCACCAGA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAAAGGTTTTTGTCTTCTaGGAGTCTCTGCAGGGCTTG	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAKVFVF*ESLQGL Trigger: CAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTT...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGGGACATCTGACTTTTaGGTTTCCTGGTGTCTCATA	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAGTSDF*VSWCLI Trigger: TATGAGACACCAGGAAACTCAAAAGTCAGATGTCCC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	AAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATCTCTTAGACTCTTCTTaGTTTGGTAGCTTACACACA	+
Preference number: 4 (lower is better) Translates to: KIQTSIQAQGHTKAGHLDLLDSS*FGSLHT Trigger: TGTGTGTAAGCTACCAAAGCAAGAAGAGTCTAAGAG...ATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGAGGCCTCGCTTTCCTTTaGAGTTGGCTCTGCCTCTGC	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRGLAFL*SWLCLC Trigger: GCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCC...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGTATCCGATGTGTCATaGTGTCTCTTCTCTTGGCAA	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAVSDVS*CLFSWQ Trigger: TTGCCAAGAGAAGAGACACCATGACACATCGGATAC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTCTCATATTTACAGATaGCAGGCTTTTCCTGTCCGC	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSASHIYR*QAFPVR Trigger: GCGGACAGGAAAAGCCTGCCATCTGTAAATATGAGA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGACAACAGTCTTCCTGTTaGCTTCGGTGGGCGAGGCCT	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRQQSSC*LRWARP Trigger: AGGCCTCGCCCACCGAAGCCAACAGGAAGACTGTTG...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTAAGGTTTTTGTCTTCTaGGAGTCTCTGCAGGGCTTG	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVKVFVF*ESLQGL Trigger: CAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTT...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGTCTTTGTTGCTGTTTaGGCTGCTAACGTCTTCCGA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVVFVAV*AANVFR Trigger: TCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGAC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGTATGGGTACAAGAGTaGCATTCCAGATGGAAGGCA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVVWVQE*HSRWKA Trigger: TGCCTTCCATCTGGAATGTCACTCTTGTACCCATAC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCATGCTCGTTTGTGTGTaGTTCTGTTGTATCAGCCAA	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAMLVCV*FCCISQ Trigger: TTGGCTGATACAACAGAAGCACACACAAACGAGCAT...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATTCTCCTTAAGCTTCTaGTGCAGCTGTCTCACTTCT	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAFSLSF*CSCLTS Trigger: AGAAGTGAGACAGCTGCAGCAGAAGCTTAAGGAGAA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTTGCTTTTTCTCAGCTaGGATGTCCTTCTGGCCTCT	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVLLFLS*DVLLAS Trigger: AGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGTATCCGATGTGTCATaGTGTCTCTTCTCTTGGCAA	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAVSDVS*CLFSWQ Trigger: TTGCCAAGAGAAGAGACACCATGACACATCGGATAC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGAAATTGGTTTTCTATaGCAGAGGCTTCCAGCTTCC	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAEIGFL*QRLPAS Trigger: GGAAGCTGGAAGCCTCTGCCATAGAAAACCAATTTC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCAGCTGCTTCAGAAATTaGTTTTCTATGGCAGAGGCT	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSASCFRN*FSMAEA Trigger: AGCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCT...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTCGTATAGATGTTTTTaGTCTCCAGCTCACGGTCCT	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSYRCF*SPAHGP Trigger: AGGACCGTGAGCTGGAGATCAAAAACATCTATACGA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGGGACATCTGACTTTTaGGTTTCCTGGTGTCTCATA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVGTSDF*VSWCLI Trigger: TATGAGACACCAGGAAACTCAAAAGTCAGATGTCCC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCAAAATGGGACATCTaGCTTTTGAGTTTCCTGGTG	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVPKWDI*LLSFLV Trigger: CACCAGGAAACTCAAAAGTCAGATGTCCCATTTTGG...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTGGTGTCTCTTCTCTTaGCAATCGTTTGAATTTGAG	+
Preference number: 4 (lower is better) Translates to: GLCNKPNLPKKSGHACSAWCLFS*QSFEFE Trigger: CTCAAATTCAAACGATTGCCAAGAGAAGAGACACCA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGAAATTGGTTTTCTATaGCAGAGGCTTCCAGCTTCC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVEIGFL*QRLPAS Trigger: GGAAGCTGGAAGCCTCTGCCATAGAAAACCAATTTC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTCTCATATTTACAGATaGCAGGCTTTTCCTGTCCGC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSHIYR*QAFPVR Trigger: GCGGACAGGAAAAGCCTGCCATCTGTAAATATGAGA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATTCCTTATTCTCTTTTaGCCTCCTAGGAGTTTCCAG	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAFLILF*PPRSFQ Trigger: CTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGGTGTCTCTTCTCTTaGCAATCGTTTGAATTTGAG	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAWCLFS*QSFEFE Trigger: CTCAAATTCAAACGATTGCCAAGAGAAGAGACACCA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTAGCTGCTTCAGAAATTaGTTTTCTATGGCAGAGGCT	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSCFRN*FSMAEA Trigger: AGCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCT...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATTTGAATTTGAGAACTaGTCAACGAAGCATTCCAGA	+
Preference number: 4 (lower is better) Translates to: QISGLCNKPNLPKKSGHAFEFEN*STKHSR Trigger: TCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCTCTTAGACTCTTCTTaGTTTGGTAGCTTACACACA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVLLDSS*FGSLHT Trigger: TGTGTGTAAGCTACCAAAGCAAGAAGAGTCTAAGAG...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTTTGAATTTGAGAACTaGTCAACGAAGCATTCCAGA	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVFEFEN*STKHSR Trigger: TCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR TCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGATTCAGGTGTCTAAGCTaGAGCTGCTTCAGAAATTGG	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRFRCLS*SCFRNW Trigger: CCAATTTCTGAAGCAGCTTCAGCTTAGACACCTGAA...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR TCA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTGTTGATTTTTCTTTATaGGCAATGTTTCCTTTCCCC	+
Preference number: 4 (lower is better) Translates to: SPGYVINPIFLKRVDMHVVDFSL*AMFPFP Trigger: GGGGAAAGGAAACATTGCTCATAAAGAAAAATCAAC...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR GCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGATTCTCCTTAAGCTTCTaGTGCAGCTGTCTCACTTCT	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRFSLSF*CSCLTS Trigger: AGAAGTGAGACAGCTGCAGCAGAAGCTTAAGGAGAA...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR GCA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGAATGCTCGTTTGTGTGTaGTTCTGTTGTATCAGCCAA	+
Preference number: 4 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRMLVCV*FCCISQ Trigger: TTGGCTGATACAACAGAAGCACACACAAACGAGCAT...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS GCA 90 bp	ACGAGGGCTCGTAGCCGGCAGGCTCCAGCCGCAGCTCCTGCTCGCTaGGGTGCTTGCCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTGC	+
Preference number: 5 (lower is better) Translates to: TRARSRQAPAAAPAR*GACPCRGGSGSAGC Trigger: GCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTGCCGGCTACGAGCCCTCGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	CGCTGCGGTGCTTGCCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTaGCCGAAACCTGCCTGCAGGAGGTGGGCAGCCCGTGGTGCAGGT	+
Preference number: 5 (lower is better) Translates to: RCGACPCRGGSGSAG*PKPACRRWAARGAG Trigger: ACCTGCACCACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	TCCTGCTCGCTGCGGTGCTTGCCCATGTCGTGGCGGCAGCGGCAGTaGGGGCTGCCCGAAACCTGCCTGCAGGAGGTGGGCAGCCCGTGG	+
Preference number: 5 (lower is better) Translates to: SCSLRCLPMSWRQRQ*GLPETCLQEVGSPW Trigger: CCACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	CGTAGCCGGCAGGCTCCAGCCGCAGCTCCTGCTCGCTGCGGTGCTTaGCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTGCCCGAAACCT	+
Preference number: 5 (lower is better) Translates to: RSRQAPAAAPARCGA*PCRGGSGSAGCPKP Trigger: AGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTGCCGGCTACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	CGCGCCGAACAGCTCCTCCATGAGGCTGCTCTTTCTGTCGCGGAATaGCGTCGCCCTGGCCCTGGCCCTGGCCCTGGCCCCGGCCCCCTT	+
Preference number: 5 (lower is better) Translates to: RAEQLLHEAALSVAE*RRPGPGPGPGPGPL Trigger: AAGGGGGCCGGGGCCAGGGCCAGGGCCAGGGCCAGGGCGACGGCATTCCGCGACAGAAAGAGCAGCCTCATGGAGGAGCTGTTCGGCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	CGCGGTCATTGCCGGCATCGCCCGCATCGCCTGCATCGCCTGCATTaGCGGCCGCCCTGGTCAGGGCCTTATCCTCGGCGTCCTTGTGGG	+
Preference number: 5 (lower is better) Translates to: RGHCRHRPHRLHRLH*RPPWSGPYPRRPCG Trigger: CCCACAAGGACGCCGAGGATAAGGCCCTGACCAGGGCGGCCGGCAATGCAGGCGATGCAGGCGATGCGGGCGATGCCGGCAATGACCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	TTGCCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTGCCCGAAACCTaGCTGCAGGAGGTGGGCAGCCCGTGGTGCAGGTTTTCGGTGGCC	+
Preference number: 5 (lower is better) Translates to: LPMSWRQRQCGLPET*LQEVGSPWCRFSVA Trigger: GGCCACCGAAAACCTGCACCACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GCATTGCCGGCCGCCCTGGTCAGGGCCTTATCCTCGGCGTCCTTGTaGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCCTCTGCTGGGATG	+
Preference number: 5 (lower is better) Translates to: ALPAALVRALSSASL*ASLSFAVGSASAGM Trigger: CATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCCCTGACCAGGGCGGCCGGCAATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GGCTTGTGCAGGAGCACTGAGACCTGCTGTAATCCACGCTCCCATTaGAAGCCTGGCTGTTCTGGGACTGGCCACCAGCGCCAGGGCTAC	+
Preference number: 5 (lower is better) Translates to: GLCRSTETCCNPRSH*KPGCSGTGHQRQGY Trigger: GTAGCCCTGGCGCTGGTGGCCAGTCCCAGAACAGCCAGGCTTCCAATGGGAGCGTGGATTACAGCAGGTCTCAGTGCTCCTGCACAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GGCCTTATCCTCGGCGTCCTTGTGGGCCTCGCTTTCCTTTGCAGTTaGCTCTGCCTCTGCTGGGATGGCTCTCTTTTCTTGGTCTTCCTT	+
Preference number: 5 (lower is better) Translates to: GLILGVLVGLAFLCS*LCLCWDGSLFLVFL Trigger: AAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GGGTACAAGAGTGACATTCCAGATGGAAGGCACAGATCTGCTCAGTaGCCACCAGTCCCCAGGAAGCTGGAGGAGATGGCATGCTCTTTA	+
Preference number: 5 (lower is better) Translates to: GYKSDIPDGRHRSAQ*PPVPRKLEEMACSL Trigger: TAAAGAGCATGCCATCTCCTCCAGCTTCCTGGGGACTGGTGGCCACTGAGCAGATCTGTGCCTTCCATCTGGAATGTCACTCTTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	GGCGTCCTTGTGGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCCTCTaGTGGGATGGCTCTCTTTTCTTGGTCTTCCTTATTCTCTTTTGG	+
Preference number: 5 (lower is better) Translates to: GVLVGLAFLCSWLCL*WDGSLFLVFLILFW Trigger: CCAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 90 bp	TTTTCTCCTTCGCCTTTGCCAGAGGCTTCTCTGACTGGAGTCTCCTaGCGGCCGTCTCAGAGCAGTCAGAGAGAAAGTCTTCTGAGTAGT	+
Preference number: 5 (lower is better) Translates to: FSPSPLPEASLTGVS*RPSQSSQRESLLSS Trigger: ACTACTCAGAAGACTTTCTCTCTGACTGCTCTGAGACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	TCTCTCTCTGCAAGGTTTTTGTCTTCTGAGAGTCTCTGCAGGGCTTaGAAGACGTCTTTGGTCCTCAGTAACTCGCCGTCGGTTTCTCGG	+
Preference number: 5 (lower is better) Translates to: SLSARFLSSESLCRA*KTSLVLSNSPSVSR Trigger: CCGAGAAACCGACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	TTGTACTTCCTTTTCTCCTTCGCCTTTGCCAGAGGCTTCTCTGACTaGAGTCTCCTGACGGCCGTCTCAGAGCAGTCAGAGAGAAAGTCT	+
Preference number: 5 (lower is better) Translates to: LYFLFSFAFARGFSD*SLLTAVSEQSERKS Trigger: AGACTTTCTCTCTGACTGCTCTGAGACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAAGGAAGTACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GGTTTTTGTCTTCTGAGAGTCTCTGCAGGGCTTGCAAGACGTCTTTaGTCCTCAGTAACTCGCCGTCGGTTTCTCGGAGTTTCCTGGACA	+
Preference number: 5 (lower is better) Translates to: GFCLLRVSAGLARRL*SSVTRRRFLGVSWT Trigger: TGTCCAGGAAACTCCGAGAAACCGACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 90 bp	TGCTGCAGCTGTCTCACTTCTGCCTGCAGAGTCTTTGTTGCTGTTTaGGCTGCTAACGTCTTCCGATTTTCTTTGGCCAGCTGTCGACTG	+
Preference number: 5 (lower is better) Translates to: CCSCLTSACRVFVAV*AANVFRFSLASCRL Trigger: CAGTCGACAGCTGGCCAAAGAAAATCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAGAAGTGAGACAGCTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 90 bp	GTCAGTTCTTCTCTCTCTGCAAGGTTTTTGTCTTCTGAGAGTCTCTaGAGGGCTTGCAAGACGTCTTTGGTCCTCAGTAACTCGCCGTCG	+
Preference number: 5 (lower is better) Translates to: VSSSLSARFLSSESL*RACKTSLVLSNSPS Trigger: CGACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAGAGAAGAACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	ATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGATGCTTTTTCTCCTTCGCCTTaGCCAGAGGCTTCTCTGACT	+
Preference number: 5 (lower is better) Translates to: IQTSIQAQGHTKAGHLDAFSPSP*PEASLT Trigger: AGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAA...AGCATCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGGGCCTCGCTTTCCTTaGCAGTTGGCTCTGCCTCTG	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSAGPRFP*QLALPL Trigger: CAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 90 bp	CTTCCAGCTTCCGATGTACGTCTGCCAGCTCGTTCTTCAGCTCTTTaGTCTTATGAAGCCTGGCTGACAGTATCCGATGTGTCATGGTGT	+
Preference number: 5 (lower is better) Translates to: LPASDVRLPARSSAL*SYEAWLTVSDVSWC Trigger: ACACCATGACACATCGGATACTGTCAGCCAGGCTTCATAAGATCAAAGAGCTGAAGAACGAGCTGGCAGACGTACATCGGAAGCTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	TCCTTTGCAGTTGGCTCTGCCTCTGCTGGGATGGCTCTCTTTTCTTaGTCTTCCTTATTCTCTTTTGGCCTCCTAGGAGTTTCCAGAGAG	+
Preference number: 5 (lower is better) Translates to: SFAVGSASAGMALFS*SSLFSFGLLGVSRE Trigger: CTCTCTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGGGCCTCGCTTTCCTTaGCAGTTGGCTCTGCCTCTG	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAGPRFP*QLALPL Trigger: CAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 90 bp	TTCCGGTGTTCGACCTCCTTTGATAAATCTGTATGGGTACAAGAGTaGCATTCCAGATGGAAGGCACAGATCTGCTCAGTGGCCACCAGT	+
Preference number: 5 (lower is better) Translates to: FRCSTSFDKSVWVQE*HSRWKAQICSVATS Trigger: ACTGGTGGCCACTGAGCAGATCTGTGCCTTCCATCTGGAATGTCACTCTTGTACCCATACAGATTTATCAAAGGAGGTCGAACACCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233151.2
CDS CCA 90 bp	TTGAGAACTGATCAACGAAGCATTCCAGAATTGCTTTTTCTCAGCTaGGATGTCCTTCTGGCCTCTAGGCTGGGGGAGTTTACCAGCGTT	+
Preference number: 5 (lower is better) Translates to: LRTDQRSIPELLFLS*DVLLASRLGEFTSV Trigger: AACGCTGGTAAACTCCCCCAGCCTAGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	GAGTCTTTGTTGCTGTTTGAGCTGCTAACGTCTTCCGATTTTCTTTaGCCAGCTGTCGACTGTAGGACCGATTGTTCAGTCGCAGCTGTT	+
Preference number: 5 (lower is better) Translates to: ESLLLFELLTSSDFL*PAVDCRTDCSVAAV Trigger: AACAGCTGCGACTGAACAATCGGTCCTACAGTCGACAGCTGGCCAAAGAAAATCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 90 bp	CTCTGCTGGGATGGCTCTCTTTTCTTGGTCTTCCTTATTCTCTTTTaGCCTCCTAGGAGTTTCCAGAGAGGTTTGTGGTTTCCGGTGTTC	+
Preference number: 5 (lower is better) Translates to: LCWDGSLFLVFLILF*PPRSFQRGLWFPVF Trigger: GAACACCGGAAACCACAAACCTCTCTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	AAAAATACAGACTTCTATACAGGCGCAGGGGCACACAAAGGCAGGCCACTTAGACTGCCTGCAGAGTCTTaGTTGCTGTTTGAGCTGCTA	+
Preference number: 5 (lower is better) Translates to: KNTDFYTGAGAHKGRPLRLPAES*LLFELL Trigger: TAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAG...TCTAAGTGGCCTGCCTTTGTGTGCCCCTGCGCCTGTATAGAAGTCTGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTTATCCTCGGCGTCCTaGTGGGCCTCGCTTTCCTTT	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSALSSAS*WASLSF Trigger: AAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAAGTGAGAAGTCAGGCTaGTGCAGGAGCACTGAGACC	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHASEKSG*CRSTET Trigger: GGTCTCAGTGCTCCTGCACAAGCCTGACTTCTCACT...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCGCTTTCCTTTGCAGTaGGCTCTGCCTCTGCTGGGA	+
Preference number: 5 (lower is better) Translates to: SPGYVINPIFLKRVDMHVRFPLQ*ALPLLG Trigger: TCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCG...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATTTTCTCCTTCGCCTTaGCCAGAGGCTTCTCTGACT	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAFSPSP*PEASLT Trigger: AGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACCTGCAGAGTCTTTGTaGCTGTTTGAGCTGCTAACG	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAPAESL*LFELLT Trigger: CGTTAGCAGCTCAAACAGCAACAAAGACTCTGCAGG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACTGCCTGCAGAGTCTTaGTTGCTGTTTGAGCTGCTA	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHALPAES*LLFELL Trigger: TAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAAGTTTCCAGAGAGGTTaGTGGTTTCCGGTGTTCGAC	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHASFQRG*WFPVFD Trigger: GTCGAACACCGGAAACCACAAACCTCTCTGGAAACT...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCCGAAGCATTCCAGAATaGCTTTTTCTCAGCTGGGAT	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSARSIPE*LFLSWD Trigger: ATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCG...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCAAGCTGCTTCAGAAATaGGTTTTCTATGGCAGAGGC	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSAKLLQK*VFYGRG Trigger: GCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCTT...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACTCTCTGCAAGGTTTTaGTCTTCTGAGAGTCTCTGC	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHALSARF*SSESLC Trigger: GCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAGGTGTTCGACCTCCTTaGATAAATCTGCTGTATGGG	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAGVRPP*INLLYG Trigger: CCCATACAGCAGATTTATCAAAGGAGGTCGAACACC...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGACGCTTTCCTTTGCAGTaGGCTCTGCCTCTGCTGGGA	+
Preference number: 5 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRRFPLQ*ALPLLG Trigger: TCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCG...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGGGGAAATGCTCGTTaGTGTGTGCTTCTGTTGTAT	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAWGNAR*CVLLLY Trigger: ATACAACAGAAGCACACACAAACGAGCATTTCCCCA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCACGAAGCATTCCAGAATaGCTTTTTCTCAGCTGGGAT	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHARSIPE*LFLSWD Trigger: ATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCG...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCAAAGCTGCTTCAGAAATaGGTTTTCTATGGCAGAGGC	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHAKLLQK*VFYGRG Trigger: GCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCTT...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATCATTTGCTTCCATTTaGGCTGTAAGGTCGGTCAAC	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHASFASI*AVRSVN Trigger: GTTGACCGACCTTACAGCCAAAATGGAAGCAAATGA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 90 bp	GTGTCATGGTGTCTCTTCTCTTGGCAATCGTTTGAATTTGAGAACTaGTCAACGAAGCATTCCAGAATTGCTTTTTCTCAGCTGGGATGT	+
Preference number: 5 (lower is better) Translates to: VSWCLFSWQSFEFEN*STKHSRIAFSQLGC Trigger: ACATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGAAGAGACACCATGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTGGGGAAATGCTCGTTaGTGTGTGCTTCTGTTGTAT	+
Preference number: 5 (lower is better) Translates to: SPGYVINPIFLKRVDMHVWGNAR*CVLLLY Trigger: ATACAACAGAAGCACACACAAACGAGCATTTCCCCA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTTCATTTGCTTCCATTTaGGCTGTAAGGTCGGTCAAC	+
Preference number: 5 (lower is better) Translates to: SPGYVINPIFLKRVDMHVSFASI*AVRSVN Trigger: GTTGACCGACCTTACAGCCAAAATGGAAGCAAATGA...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCGATGGCTCTCTTTTCTaGGTCTTCCTTATTCTCTTT	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSADGSLF*VFLILF Trigger: AAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATC...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	GGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCCGCCTCTCTTGGCAATCGTTaGAATTTGAGAACTGATCAA	+
Preference number: 5 (lower is better) Translates to: GLCNKPNLPKKSGHACSASLGNR*NLRTDQ Trigger: TTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGA...GGCGGAACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGAAGTTTCCAGAGAGGTTaGTGGTTTCCGGTGTTCGAC	+
Preference number: 5 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRSFQRG*WFPVFD Trigger: GTCGAACACCGGAAACCACAAACCTCTCTGGAAACT...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	CAGATCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATCTCTTGGCAATCGTTaGAATTTGAGAACTGATCAA	+
Preference number: 5 (lower is better) Translates to: QISGLCNKPNLPKKSGHASLGNR*NLRTDQ Trigger: TTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGA...TGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS-3UTR CAA 90 bp	TTAGACCTGAGCAGCCAGATTGAACATGCAGTTATTTTTAGAACAAGATTAAGACTCTCTGCAAGGTTTTaGTCTTCTGAGAGTCTCTGC	+
Preference number: 5 (lower is better) Translates to: LDLSSQIEHAVIFRTRLRLSARF*SSESLC Trigger: GCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAG...TCTTAATCTTGTTCTAAAAATAACTGCATGTTCAATCTGGCTGCTCAGGTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113804.8
CDS-3UTR CAA 90 bp	TCTCCGGGCTATGTAATAAACCCAATCTTCCTAAAAAGAGTGGACATGCATGTTCTTGCACTGATTTCGTaGAAGAAACTTTCGGATAGT	+
Preference number: 5 (lower is better) Translates to: SPGYVINPIFLKRVDMHVLALIS*KKLSDS Trigger: ACTATCCGAAAGTTTCTTCAACGAAATCAGTGCAAG...AACATGCATGTCCACTCTTTTTAGGAAGATTGGGTTTATTACATAGCCCGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	CCGGCAGGCTCCAGCCGCAGCTCCTGCTCGCTGCGGTaGTTGCCCATGTCGTGGCGGCAGCGGCAGTGCGGG	+
Preference number: 6 (lower is better) Translates to: PAGSSRSSCSLR*LPMSWRQRQCG Trigger: CCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTGCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	CAGGCTCCAGCCGCAGCTCCTGCTCGCTGCGGTGCTTaGCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTGC	+
Preference number: 6 (lower is better) Translates to: QAPAAAPARCGA*PCRGGSGSAGC Trigger: GCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	GCAGGCTCCAGCCGCAGCTCCTGCTCGCTGCGGTGCTaGCCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTG	+
Preference number: 6 (lower is better) Translates to: AGSSRSSCSLRC*PMSWRQRQCGL Trigger: CAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	GGCGGCAGCGGCAGTGCGGGCTGCCCGAAACCTGCCTaGAGGAGGTGGGCAGCCCGTGGTGCAGGTTTTCGG	+
Preference number: 6 (lower is better) Translates to: GGSGSAGCPKPA*RRWAARGAGFR Trigger: CCGAAAACCTGCACCACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	GCTTGCCCATGTCGTGGCGGCAGCGGCAGTGCGGGCTaGCCGAAACCTGCCTGCAGGAGGTGGGCAGCCCGT	+
Preference number: 6 (lower is better) Translates to: ACPCRGGSGSAG*PKPACRRWAAR Trigger: ACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGACATGGGCAAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	CGTAGCCGGCAGGCTCCAGCCGCAGCTCCTGCTCGCTaGGGTGCTTGCCCATGTCGTGGCGGCAGCGGCAGT	+
Preference number: 6 (lower is better) Translates to: RSRQAPAAAPAR*GACPCRGGSGS Trigger: ACTGCCGCTGCCGCCACGACATGGGCAAGCACCGCAGCGAGCAGGAGCTGCGGCTGGAGCCTGCCGGCTACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	TGCCGGCATCGCCCGCATCGCCTGCATCGCCTGCATTaGCGGCCGCCCTGGTCAGGGCCTTATCCTCGGCGT	+
Preference number: 6 (lower is better) Translates to: CRHRPHRLHRLH*RPPWSGPYPRR Trigger: ACGCCGAGGATAAGGCCCTGACCAGGGCGGCCGGCAATGCAGGCGATGCAGGCGATGCGGGCGATGCCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	TCGTGGCGGCAGCGGCAGTGCGGGCTGCCCGAAACCTaGCTGCAGGAGGTGGGCAGCCCGTGGTGCAGGTTT	+
Preference number: 6 (lower is better) Translates to: SWRQRQCGLPET*LQEVGSPWCRF Trigger: AAACCTGCACCACGGGCTGCCCACCTCCTGCAGGCAGGTTTCGGGCAGCCCGCACTGCCGCTGCCGCCACGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	CCCTGCCCGCGAAGCCCGCGCCGAACAGCTCCTCCATaGGGCTGCTCTTTCTGTCGCGGAATGCCGTCGCCC	+
Preference number: 6 (lower is better) Translates to: PCPRSPRRTAPP*GCSFCRGMPSP Trigger: GGGCGACGGCATTCCGCGACAGAAAGAGCAGCCTCATGGAGGAGCTGTTCGGCGCGGGCTTCGCGGGCAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	CCGGCCGCCCTGGTCAGGGCCTTATCCTCGGCGTCCTaGTGGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCC	+
Preference number: 6 (lower is better) Translates to: PAALVRALSSAS*WASLSFAVGSA Trigger: GGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCCCTGACCAGGGCGGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	CCTGCATTGCCGGCCGCCCTGGTCAGGGCCTTATCCTCGGCGTCCTaGTGGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCCTCTGCTGGG	+
Preference number: 6 (lower is better) Translates to: PALPAALVRALSSAS*WASLSFAVGSASAG Trigger: CCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCCCTGACCAGGGCGGCCGGCAATGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	TGGGCAGCCCGTGGTGCAGGTTTTCGGTGGCCTCGGTaGAGGAGTAGTGCTTCCGCGGGGTCTTCCTCCTGC	+
Preference number: 6 (lower is better) Translates to: WAARGAGFRWPR*RSSASAGSSSC Trigger: GCAGGAGGAAGACCCCGCGGAAGCACTACTCCTTCACCGAGGCCACCGAAAACCTGCACCACGGGCTGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	GCCGCCCTGGTCAGGGCCTTATCCTCGGCGTCCTTGTaGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCCTCT	+
Preference number: 6 (lower is better) Translates to: AALVRALSSASL*ASLSFAVGSAS Trigger: AGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCCCTGACCAGGGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	TCCACGCTCCCATTGGAAGCCTGGCTGTTCTGGGACTaGCCACCAGCGCCAGGGCTACGCTTGCCTTCTGTA	+
Preference number: 6 (lower is better) Translates to: STLPLEAWLFWD*PPAPGLRLPSV Trigger: TACAGAAGGCAAGCGTAGCCCTGGCGCTGGTGGCCAGTCCCAGAACAGCCAGGCTTCCAATGGGAGCGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	AGGAGCACTGAGACCTGCTGTAATCCACGCTCCCATTaGAAGCCTGGCTGTTCTGGGACTGGCCACCAGCGC	+
Preference number: 6 (lower is better) Translates to: RSTETCCNPRSH*KPGCSGTGHQR Trigger: GCGCTGGTGGCCAGTCCCAGAACAGCCAGGCTTCCAATGGGAGCGTGGATTACAGCAGGTCTCAGTGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	CCTTATCCTCGGCGTCCTTGTGGGCCTCGCTTTCCTTaGCAGTTGGCTCTGCCTCTGCTGGGATGGCTCTCT	+
Preference number: 6 (lower is better) Translates to: PYPRRPCGPRFP*QLALPLLGWLS Trigger: AGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	TGGTCAGGGCCTTATCCTCGGCGTCCTTGTGGGCCTCGCTTTCCTTaGCAGTTGGCTCTGCCTCTGCTGGGATGGCTCTCTTTTCTTGGT	+
Preference number: 6 (lower is better) Translates to: WSGPYPRRPCGPRFP*QLALPLLGWLSFLG Trigger: ACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGACGCCGAGGATAAGGCCCTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	CTGTTCTGGGACTGGCCACCAGCGCCAGGGCTACGCTaGCCTTCTGTAGACTTCTTGTTGCTTCCTAGTGCC	+
Preference number: 6 (lower is better) Translates to: LFWDWPPAPGLR*PSVDFLLLPSA Trigger: GGCACTAGGAAGCAACAAGAAGTCTACAGAAGGCAAGCGTAGCCCTGGCGCTGGTGGCCAGTCCCAGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	CTTCCTTTTCTCCTTCGCCTTTGCCAGAGGCTTCTCTaGCTGGAGTCTCCTGACGGCCGTCTCAGAGCAGTC	+
Preference number: 6 (lower is better) Translates to: LPFLLRLCQRLL*LESPDGRLRAV Trigger: GACTGCTCTGAGACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	CTTTTCTCCTTCGCCTTTGCCAGAGGCTTCTCTGACTaGAGTCTCCTGACGGCCGTCTCAGAGCAGTCAGAG	+
Preference number: 6 (lower is better) Translates to: LFSFAFARGFSD*SLLTAVSEQSE Trigger: CTCTGACTGCTCTGAGACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCAAAGGCGAAGGAGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	AGTGACATTCCAGATGGAAGGCACAGATCTGCTCAGTaGCCACCAGTCCCCAGGAAGCTGGAGGAGATGGCA	+
Preference number: 6 (lower is better) Translates to: SDIPDGRHRSAQ*PPVPRKLEEMA Trigger: TGCCATCTCCTCCAGCTTCCTGGGGACTGGTGGCCACTGAGCAGATCTGTGCCTTCCATCTGGAATGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	TGGCCACCAGCGCCAGGGCTACGCTTGCCTTCTGTAGACTTCTTGTaGCTTCCTAGTGCCAGACTGGGGAAATGCTCGTTTGTGTGTGCT	+
Preference number: 6 (lower is better) Translates to: WPPAPGLRLPSVDFL*LPSARLGKCSFVCA Trigger: AGCACACACAAACGAGCATTTCCCCAGTCTGGCACTAGGAAGCAACAAGAAGTCTACAGAAGGCAAGCGTAGCCCTGGCGCTGGTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	TCGCCTTTGCCAGAGGCTTCTCTGACTGGAGTCTCCTaGCGGCCGTCTCAGAGCAGTCAGAGAGAAAGTCTT	+
Preference number: 6 (lower is better) Translates to: SPLPEASLTGVS*RPSQSSQRESL Trigger: AAGACTTTCTCTCTGACTGCTCTGAGACGGCCGTCAGGAGACTCCAGTCAGAGAAGCCTCTGGCAAAGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	GTCCTTGTGGGCCTCGCTTTCCTTTGCAGTTGGCTCTaGCTCTGCTGGGATGGCTCTCTTTTCTTGGTCTTC	+
Preference number: 6 (lower is better) Translates to: VLVGLAFLCSWL*LCWDGSLFLVF Trigger: GAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCACAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	TCCTTCTGGCCTCTAGGCTGGGGGAGTTTACCAGCGTaGTACTTCCTTTTCTCCTTCGCCTTTGCCAGAGGC	+
Preference number: 6 (lower is better) Translates to: SFWPLGWGSLPA*YFLFSFAFARG Trigger: GCCTCTGGCAAAGGCGAAGGAGAAAAGGAAGTACAACGCTGGTAAACTCCCCCAGCCTAGAGGCCAGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	TCTTCTGAGAGTCTCTGCAGGGCTTGCAAGACGTCTTaGGTCCTCAGTAACTCGCCGTCGGTTTCTCGGAGT	+
Preference number: 6 (lower is better) Translates to: SSESLCRACKTS*VLSNSPSVSRS Trigger: ACTCCGAGAAACCGACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	GTGGGCCTCGCTTTCCTTTGCAGTTGGCTCTGCCTCTaGTGGGATGGCTCTCTTTTCTTGGTCTTCCTTATT	+
Preference number: 6 (lower is better) Translates to: VGLAFLCSWLCL*WDGSLFLVFLI Trigger: AATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCGAGGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	AGGTTTTTGTCTTCTGAGAGTCTCTGCAGGGCTTGCAAGACGTCTTaGGTCCTCAGTAACTCGCCGTCGGTTTCTCGGAGTTTCCTGGAC	+
Preference number: 6 (lower is better) Translates to: RFLSSESLCRACKTS*VLSNSPSVSRSFLD Trigger: GTCCAGGAAACTCCGAGAAACCGACGGCGAGTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	AGTCTTCTGAGTAGTCATAGTGAGAAGTCAGGCTTGTaGAGGAGCACTGAGACCTGCTGTAATCCACGCTCC	+
Preference number: 6 (lower is better) Translates to: SLLSSHSEKSGL*RSTETCCNPRS Trigger: GGAGCGTGGATTACAGCAGGTCTCAGTGCTCCTGCACAAGCCTGACTTCTCACTATGACTACTCAGAAGACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	TTGATCTCCAGCTCACGGTCCTTCTCCTTAAGCTTCTaGTGCAGCTGTCTCACTTCTGCCTGCAGAGTCTTT	+
Preference number: 6 (lower is better) Translates to: LISSSRSFSLSF*CSCLTSACRVF Trigger: AAAGACTCTGCAGGCAGAAGTGAGACAGCTGCAGCAGAAGCTTAAGGAGAAGGACCGTGAGCTGGAGATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	AGGTCGGTCAACCTGTCAGTCAGTTCTTCTCTCTCTGCAAGGTTTTaGTCTTCTGAGAGTCTCTGCAGGGCTTGCAAGACGTCTTTGGTC	+
Preference number: 6 (lower is better) Translates to: RSVNLSVSSSLSARF*SSESLCRACKTSLV Trigger: GACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAGAGAAGAACTGACTGACAGGTTGACCGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	GATCAACGAAGCATTCCAGAATTGCTTTTTCTCAGCTaGGATGTCCTTCTGGCCTCTAGGCTGGGGGAGTTT	+
Preference number: 6 (lower is better) Translates to: DQRSIPELLFLS*DVLLASRLGEF Trigger: AAACTCCCCCAGCCTAGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	TTCCTTTGCAGTTGGCTCTGCCTCTGCTGGGATGGCTCTCTTTTCTaGGTCTTCCTTATTCTCTTTTGGCCTCCTAGGAGTTTCCAGAGA	+
Preference number: 6 (lower is better) Translates to: FLCSWLCLCWDGSLF*VFLILFWPPRSFQR Trigger: TCTCTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	TGTCTCACTTCTGCCTGCAGAGTCTTTGTTGCTGTTTaGGCTGCTAACGTCTTCCGATTTTCTTTGGCCAGC	+
Preference number: 6 (lower is better) Translates to: CLTSACRVFVAV*AANVFRFSLAS Trigger: GCTGGCCAAAGAAAATCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAGAAGTGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS GCA 72 bp	TCTCTCTCTGCAAGGTTTTTGTCTTCTGAGAGTCTCTaGAGGGCTTGCAAGACGTCTTTGGTCCTCAGTAAC	+
Preference number: 6 (lower is better) Translates to: SLSARFLSSESL*RACKTSLVLSN Trigger: GTTACTGAGGACCAAAGACGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	TTGCTGTTTGAGCTGCTAACGTCTTCCGATTTTCTTTaGCCAGCTGTCGACTGTAGGACCGATTGTTCAGTC	+
Preference number: 6 (lower is better) Translates to: LLFELLTSSDFL*PAVDCRTDCSV Trigger: GACTGAACAATCGGTCCTACAGTCGACAGCTGGCCAAAGAAAATCGGAAGACGTTAGCAGCTCAAACAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CCA 72 bp	CGCTTTCCTTTGCAGTTGGCTCTGCCTCTGCTGGGATaGCTCTCTTTTCTTGGTCTTCCTTATTCTCTTTTG	+
Preference number: 6 (lower is better) Translates to: RFPLQLALPLLG*LSFLGLPYSLL Trigger: CAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATCCCAGCAGAGGCAGAGCCAACTGCAAAGGAAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	GGCTTTCAGGTGTCTAAGCTGAAGCTGCTTCAGAAATaGGTTTTCTATGGCAGAGGCTTCCAGCTTCCGATG	+
Preference number: 6 (lower is better) Translates to: GFQVSKLKLLQK*VFYGRGFQLPM Trigger: CATCGGAAGCTGGAAGCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCTTCAGCTTAGACACCTGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	AACCTGTCAGTCAGTTCTTCTCTCTCTGCAAGGTTTTaGTCTTCTGAGAGTCTCTGCAGGGCTTGCAAGACG	+
Preference number: 6 (lower is better) Translates to: NLSVSSSLSARF*SSESLCRACKT Trigger: CGTCTTGCAAGCCCTGCAGAGACTCTCAGAAGACAAAAACCTTGCAGAGAGAGAAGAACTGACTGACAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	GCTGCAGCTGTCTCACTTCTGCCTGCAGAGTCTTTGTaGCTGTTTGAGCTGCTAACGTCTTCCGATTTTCTT	+
Preference number: 6 (lower is better) Translates to: AAAVSLLPAESL*LFELLTSSDFL Trigger: AAGAAAATCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAGAAGTGAGACAGCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	TCTGCTGCAGCTGTCTCACTTCTGCCTGCAGAGTCTTaGTTGCTGTTTGAGCTGCTAACGTCTTCCGATTTT	+
Preference number: 6 (lower is better) Translates to: SAAAVSLLPAES*LLFELLTSSDF Trigger: AAAATCGGAAGACGTTAGCAGCTCAAACAGCAACAAAGACTCTGCAGGCAGAAGTGAGACAGCTGCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	GGCAATCGTTTGAATTTGAGAACTGATCAACGAAGCATTCCAGAATaGCTTTTTCTCAGCTGGGATGTCCTTCTGGCCTCTAGGCTGGGG	+
Preference number: 6 (lower is better) Translates to: GNRLNLRTDQRSIPE*LFLSWDVLLASRLG Trigger: CCCCAGCCTAGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAACGATTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 90 bp	TTTCCCTATGGCTTTCAGGTGTCTAAGCTGAAGCTGCTTCAGAAATaGGTTTTCTATGGCAGAGGCTTCCAGCTTCCGATGTACGTCTGC	+
Preference number: 6 (lower is better) Translates to: FPYGFQVSKLKLLQK*VFYGRGFQLPMYVC Trigger: GCAGACGTACATCGGAAGCTGGAAGCCTCTGCCATAGAAAACCAATTTCTGAAGCAGCTTCAGCTTAGACACCTGAAAGCCATAGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	GTCGAAGGTTCTTCACCTCATTCTGGTGCTTGGCTGTaGTTTGAGGTAGGTTGTTCTGAGAGTTCACGTATT	+
Preference number: 6 (lower is better) Translates to: VEGSSPHSGAWL*FEVGCSESSRI Trigger: AATACGTGAACTCTCAGAACAACCTACCTCAAATCACAGCCAAGCACCAGAATGAGGTGAAGAACCTTCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	ACCTCCTTTGATAAATCTGCTGTATGGGTACAAGAGTaGCATTCCAGATGGAAGGCACAGATCTGCTCAGTG	+
Preference number: 6 (lower is better) Translates to: TSFDKSAVWVQE*HSRWKAQICSV Trigger: CACTGAGCAGATCTGTGCCTTCCATCTGGAATGTCACTCTTGTACCCATACAGCAGATTTATCAAAGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8
CDS TCA 72 bp	TCGACCTCCTTTGATAAATCTGTATGGGTACAAGAGTaGCATTCCAGATGGAAGGCACAGATCTGCTCAGTG	+
Preference number: 6 (lower is better) Translates to: STSFDKSVWVQE*HSRWKAQICSV Trigger: CACTGAGCAGATCTGTGCCTTCCATCTGGAATGTCACTCTTGTACCCATACAGATTTATCAAAGGAGGTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233151.2
CDS CAA 72 bp	CCAGAGAGGTTTGTGGTTTCCGGTGTTCGACCTCCTTaGATAAATCTGTATGGGTACAAGAGTGACATTCCA	+
Preference number: 6 (lower is better) Translates to: PERFVVSGVRPP*INLYGYKSDIP Trigger: TGGAATGTCACTCTTGTACCCATACAGATTTATCAAAGGAGGTCGAACACCGGAAACCACAAACCTCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233151.2
CDS CCA 72 bp	GATGGCTCTCTTTTCTTGGTCTTCCTTATTCTCTTTTaGCCTCCTAGGAGTTTCCAGAGAGGTTTGTGGTTT	+
Preference number: 6 (lower is better) Translates to: DGSLFLVFLILF*PPRSFQRGLWF Trigger: AAACCACAAACCTCTCTGGAAACTCCTAGGAGGCCAAAAGAGAATAAGGAAGACCAAGAAAAGAGAGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	TTGAATTTGAGAACTGATCAACGAAGCATTCCAGAATaGCTTTTTCTCAGCTGGGATGTCCTTCTGGCCTCT	+
Preference number: 6 (lower is better) Translates to: LNLRTDQRSIPE*LFLSWDVLLAS Trigger: AGAGGCCAGAAGGACATCCCAGCTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	CCGATGTGTCATGGTGTCTCTTCTCTTGGCAATCGTTaGAATTTGAGAACTGATCAACGAAGCATTCCAGAA	+
Preference number: 6 (lower is better) Translates to: PMCHGVSSLGNR*NLRTDQRSIPE Trigger: TTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGAAGAGACACCATGACACATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	TTACCCTTGGTTATCCAAAATGGGACATCTGACTTTTaGGTTTCCTGGTGTCTCATATTTACAGATGGCAGG	+
Preference number: 6 (lower is better) Translates to: LPLVIQNGTSDF*VSWCLIFTDGR Trigger: CCTGCCATCTGTAAATATGAGACACCAGGAAACTCAAAAGTCAGATGTCCCATTTTGGATAACCAAGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS CAA 72 bp	TGTCATGGTGTCTCTTCTCTTGGCAATCGTTTGAATTaGAGAACTGATCAACGAAGCATTCCAGAATTGCTT	+
Preference number: 6 (lower is better) Translates to: CHGVSSLGNRLN*RTDQRSIPELL Trigger: AAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGAAGAGACACCATGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2
CDS TCA 72 bp	TGTCTCTTCTCTTGGCAATCGTTTGAATTTGAGAACTaGTCAACGAAGCATTCCAGAATTGCTTTTTCTCAG	+
Preference number: 6 (lower is better) Translates to: CLFSWQSFEFEN*STKHSRIAFSQ Trigger: CTGAGAAAAAGCAATTCTGGAATGCTTCGTTGATCAGTTCTCAAATTCAAACGATTGCCAAGAGAAGAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054855.14 ENSMUST00000113804.8 ENSMUST00000233151.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu