Pregenerated sensors for LBX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025216Ensembl transcript IDs: ENSMUST00000099401.6
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCACTATATAGGCTTAAATATTTATACAGAAGCCATACAGAATTaGACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGTGGCGGC | + |
|
Preference number: 1 (lower is better) Translates to: THYIGLNIYTEAIQN*TARASGAAEASCGG Trigger: GCCGCCACACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTGTATAAATATTTAAGCCTATATAGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CCA 90 bp | GGGCCTCGGGAGGCAGACACGCCATCGAAAGCAGACTTCTCTCGCTaGGGAAAGAAAAGATCGATTTTGAAACTTGCAAGTCAGGGCCCG | + |
|
Preference number: 1 (lower is better) Translates to: GPREADTPSKADFSR*GKKRSILKLASQGP Trigger: CGGGCCCTGACTTGCAAGTTTCAAAATCGATCTTTTCTTTCCCCAGCGAGAGAAGTCTGCTTTCGATGGCGTGTCTGCCTCCCGAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR GCA 90 bp | CTAGGGCTTTGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTaGTTTTTCCCTAAGAGCCAGACTTCAGCAATCAGTCCGAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LGLWVLFSMTGWVLP*FFPKSQTSAISPRK Trigger: TTTTCTCGGACTGATTGCTGAAGTCTGGCTCTTAGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCAAAGCCCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR-3UTR GCA 90 bp | CGGCCGGCCCGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGGTGGAGGCGGGAGGTaGAGAGGAGGTCCCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RPARIYCFEKEEAAIRGQGGGGR*RGGPSS Trigger: GGAGCTGGGACCTCCTCTGCACCTCCCGCCTCCACC...TTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCGGGCCGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CAA 90 bp | AACCCACTATATAGGCTTAAATATTTATACAGAAGCCATACAGAATaGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGTGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: NPLYRLKYLYRSHTE*HGEGFRGGGGLVWR Trigger: CCGCCACACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTGTATAAATATTTAAGCCTATATAGTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTTTGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTGCTTTTTCCCTGAAGCCATACAGAATTaGACGGCGAGGGCTTCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLWVLFSMTGWVLPCFFPEAIQN*TARASG Trigger: CCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTC...AGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCAAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CCA 72 bp | GGCTATCAGGGGCCAAGCCCGGCCCCGGGACAAGGGTaGAGGCGGGAGGTGCAGAGGAGGTCCCAGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GYQGPSPAPGQG*RREVQRRSQLP Trigger: GGGGAGCTGGGACCTCCTCTGCACCTCCCGCCTCCACCCTTGTCCCGGGGCCGGGCTTGGCCCCTGATAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR-3UTR CAA 90 bp | TATACAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCGCCGGCCCGGATTTATaGCTTCGAAAAGGAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YTEAIQNCTARASGAAEAAGPDL*LRKGRG Trigger: GCCTCTTCCTTTTCGAAGCAATAAATCCGGGCCGGC...GGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTGTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTGTAATAGGCCGAGAGAGGTGAGCGGACCGGTGCATTCGCCACATGCAGAAAGAAGCCATACAGAATaGCACGGCGAGGGCTTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: NCNRPREVSGPVHSPHAERSHTE*HGEGFR Trigger: CCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT...TTCTGCATGTGGCGAATGCACCGGTCCGCTCACCTCTCTCGGCCTATTACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR GCA 72 bp | TGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTaGTTTTTCCCTAAGAGCCAGACTTCAGCAATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WVLFSMTGWVLP*FFPKSQTSAIS Trigger: ACTGATTGCTGAAGTCTGGCTCTTAGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CCA 72 bp | AATGGCAAAGACTTTATTTATCGGAGGAAGAGGCCTTaGGTACAGTCGAAGAAAGAGAGGGCAAGGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NGKDFIYRRKRP*VQSKKERARQE Trigger: CTCCTGCCTTGCCCTCTCTTTCTTCGACTGTACCCAAGGCCTCTTCCTCCGATAAATAAAGTCTTTGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CCA 72 bp | GAGGCAGACACGCCATCGAAAGCAGACTTCTCTCGCTaGGGAAAGAAAAGATCGATTTTGAAACTTGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EADTPSKADFSR*GKKRSILKLAS Trigger: ACTTGCAAGTTTCAAAATCGATCTTTTCTTTCCCCAGCGAGAGAAGTCTGCTTTCGATGGCGTGTCTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGTGGCCCGCTGGTCCGTaGGTGGAGAGGCGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSHTELHGEGFRGGGGLVWPAGP*VERRAR Trigger: TCTCGCCCGCCTCTCCACTCACGGACCAGCGGGCCA...CACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGCCAAGCCCGGCCCCGGGACAAGGGTGGAGGCGGGAGGTGCAGAGGAGAGCTGCTGCGCAATTTaGTCGCGATCTGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGAKPGPGTRVEAGGAEESCCAI*SRSAGD Trigger: GTCCCCGGCAGATCGCGACCAAATTGCGCAGCAGCT...CTCCTCTGCACCTCCCGCCTCCACCCTTGTCCCGGGGCCGGGCTTGGCCCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGCCAAGCCCGGCCCCGGGACAAGGGTGGAGGCGGGAGGTGCAGAGGAGGGTGAAGGCCGTGCGTaGTTTTCGCCGTTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKPGPGTRVEAGGAEEGEGRA*FSPFLG Trigger: CCCAAGAAACGGCGAAAATCACGCACGGCCTTCACC...CTCCTCTGCACCTCCCGCCTCCACCCTTGTCCCGGGGCCGGGCTTGGCCCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTCGGCCTTCGGCTGCCTaGAGGACGCTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKPYRIARRGLPGRRRPRRPSAA*RTLTSS Trigger: GCTGGAGGTCAGCGTCCTGCAGGCAGCCGAAGGCCG...ACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTCCGCTGGTCCGTGAGTaGAGAGGCGGGCGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKPYRIARRGLPGRRRPRPLVRE*RGGREL Trigger: CAGCTCTCGCCCGCCTCTCCACTCACGGACCAGCGG...ACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGATCGCGGCCTTCGGCTaGCTGCAGGACGCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHTELHGEGFRGGGGLVIAAFG*LQDADL Trigger: GAGGTCAGCGTCCTGCAGGCAGCCGAAGGCCGCGAT...CACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CGGCCGGCCCGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGGTGGTCCAGAGGGCTaGGTCGCCGCTCCTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPARIYCFEKEEAAIRGQGGPEG*VAAPPL Trigger: CAGGGGAGGAGCGGCGACGCAGCCCTCTGGACCACC...TTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCGGGCCGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGTGAGGCCCAGCTGCTaGGCAATTTGGTCGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPYRIARRGLPGRRRPRVRPSC*AIWSRS Trigger: AGATCGCGACCAAATTGCGCAGCAGCTGGGCCTCAC...ACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGCCAAGCCCGGCCCCGGGACAAGGGTGGAGGCGGGAGGTGCAGAGGAGGGGGACAGGTACTTCTaGTATAGAAAGCGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAKPGPGTRVEAGGAEEGDRYF*YRKRFS Trigger: GGAGAAACGCTTTCTATACCAGAAGTACCTGTCCCC...CTCCTCTGCACCTCCCGCCTCCACCCTTGTCCCGGGGCCGGGCTTGGCCCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGAGATCTGGTGGTTGGTaGAGGCCGTGCGTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHTELHGEGFRGGGGLVRSGGW*RPCVIF Trigger: GAAAATCACGCACGGCCTTCACCAACCACCAGATCT...CACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGCCCGGCCCGAAGCCTCCGAGTTCTaGTCGAGTTCGGCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIYCFEKEEAAIRGQARPEASEF*SSSASA Trigger: GGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCTTC...GGGCCGGGCTTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | TATACAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCGCCTCTGCCCAAAGATaGTCATCCCATCGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTEAIQNCTARASGAAEAASAQR*SSHRGL Trigger: AAGGCCGCGATGGGATGACCATCTTTGGGCAGAGGC...GGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTGTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCCTTGGGTACAGTCGAAGAAAGAGAGGGCAAGGCAGGAGCTGGGAAAGTGGCTGCTGGCCCGCTaGTCCGTGAGTGGAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRPWVQSKKERARQELGKWLLAR*SVSGEA Trigger: CGCCTCTCCACTCACGGACCAGCGGGCCAGCAGCCA...CTTTCCCAGCTCCTGCCTTGCCCTCTCTTTCTTCGACTGTACCCAAGGCCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR TCA 90 bp | AACTGTAATAGGCCGAGAGAGGTGAGCGGACCGGTGCATTCGCCACATGCAGAACCTCTAGGTCCCGCTTaGGCTTGGCGCGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCNRPREVSGPVHSPHAEPLGPA*AWRAGS Trigger: AGAACCGGCGCGCCAAGCTCAAGCGGGACCTAGAGG...TTCTGCATGTGGCGAATGCACCGGTCCGCTCACCTCTCTCGGCCTATTACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | CGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGCCCGGCCCTGGGGCCCAGTTTCTTaGCAGACTCCACGTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIYCFEKEEAAIRGQARPWGPVS*QTPRRP Trigger: AGGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCA...GGGCCGGGCTTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGCCCGGCCCTTGGTGAGGCCCAGCTaGTGCGCAATTTGGTCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RIYCFEKEEAAIRGQARPLVRPS*CAIWSR Trigger: TCGCGACCAAATTGCGCAGCAGCTGGGCCTCACCAA...GGGCCGGGCTTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | AACTGTAATAGGCCGAGAGAGGTGAGCGGACCGGTGCATTCGCCACATGCAGAAGCCACGATGTCCATCTaGCCGCTGGGGCCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCNRPREVSGPVHSPHAEATMSI*PLGPSF Trigger: GAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGC...TTCTGCATGTGGCGAATGCACCGGTCCGCTCACCTCTCTCGGCCTATTACAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCGACCCGGCAGCACCCGGGCTTTGAAAACATCGAAATCTCTGAGATTAAAGCGGCTTGTTGGAGTTaGCGGGCGGCGGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPTRQHPGFENIEISEIKAACWS*RAAAGG Trigger: ACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGC...TTTAATCTCAGAGATTTCGATGTTTTCAAAGCCCGGGTGCTGCCGGGTCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTTTTTCCCTAAGAGCCAGACTTCAGCAATCAGTCCGAGAAAATGCAGGCAGAGAGGCGAGGTCTaGGAGAGCAGAGCGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCFFPKSQTSAISPRKCRQRGEV*ESRARP Trigger: GGGCCGCGCTCTGCTCTCGCAGACCTCGCCTCTCTG...CCTGCATTTTCTCGGACTGATTGCTGAAGTCTGGCTCTTAGGGAAAAAGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCTTGGGTACAGTCGAAGAAAGAGAGGGCAAGGCAGGAGCTGGGAAAGCGTTTCTTGGGCGTCTaGCTCTGCCCAAAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRPWVQSKKERARQELGKRFLGV*LCPKMV Trigger: GACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACG...CTTTCCCAGCTCCTGCCTTGCCCTCTCTTTCTTCGACTGTACCCAAGGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | GGGCTTTGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTGCTTTTTCCCTCCAGGTGATGACCTGTaGATTGGTGAGGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLWVLFSMTGWVLPCFFPPGDDL*IGEAQL Trigger: CAGCTGGGCCTCACCAATGCACAGGTCATCACCTGG...AGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCAAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CCA 90 bp | GCAGACACGCCATCGAAAGCAGACTTCTCTCGCTGGGGAAAGAAAAGATCGATTTGTCCATCTGCCCGCTaGGGCCCAGTTTCTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADTPSKADFSRWGKKRSICPSAR*GPVSWQ Trigger: CTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACA...AATCGATCTTTTCTTTCCCCAGCGAGAGAAGTCTGCTTTCGATGGCGTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTGCTTTTTCCCTAAGAGCTTGGGCGTCTGCCTCTaGCCAAAGATGGTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVLFSMTGWVLPCFFPKSLGVCL*PKMVIP Trigger: TGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAA...GCTCTTAGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR GCA 90 bp | GCAGACACGCCATCGAAAGCAGACTTCTCTCGCTGGGGAAAGAAAAGATCGATTAATTTGGTCGCGATCTaGCGGGGACAGGTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADTPSKADFSRWGKKRSINLVAI*RGQVLL Trigger: CAGAAGTACCTGTCCCCGGCAGATCGCGACCAAATT...AATCGATCTTTTCTTTCCCCAGCGAGAGAAGTCTGCTTTCGATGGCGTGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| 3UTR CAA 72 bp | AAATGGCAAAGACTTTATTTATCGGAGGAAGAGGCCTaGGGTACAGTCGAAGAAAGAGAGGGCAAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWQRLYLSEEEA*GTVEEREGKAG Trigger: TCCTGCCTTGCCCTCTCTTTCTTCGACTGTACCCAAGGCCTCTTCCTCCGATAAATAAAGTCTTTGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | TGCGAGAGCAGAGCGCGGCCCGCCAGGGGCAAGCCGCCCGGCGCGTaGTTGTCCGCGGCCGCCAGCAGGTGCGCCGCCCCACACAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CESRARPARGKPPGA*LSAAASRCAAPHSE Trigger: CTCGCTGTGTGGGGCGGCGCACCTGCTGGCGGCCGCGGACAAGCACGCGCCGGGCGGCTTGCCCCTGGCGGGCCGCGCTCTGCTCTCGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | GCGGCTTGTTGGAGTTGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTaGGTCGCCGCTCCTCCCCTGGCGCCGCCTTGCCGTCCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AACWSWRAAAGGPEG*VAAPPLAPPCRPPW Trigger: CCAAGGAGGACGGCAAGGCGGCGCCAGGGGAGGAGCGGCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | AAGGTCTTGCTGGCGAGCTCCTCCAAGGCGCAGAGAGGCGAGGTCTaGGAGAGCAGAGCGCGGCCCGCCAGGGGCAAGCCGCCCGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: KVLLASSSKAQRGEV*ESRARPARGKPPGA Trigger: CGCGCCGGGCGGCTTGCCCCTGGCGGGCCGCGCTCTGCTCTCGCAGACCTCGCCTCTCTGCGCCTTGGAGGAGCTCGCCAGCAAGACCTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 90 bp | CTGAACGGCGTCAGCGGCTTGTTGGAGTTGGCGGGCGGCGGCAGGTaGTCCAGAGGGCTGCGTCGCCGCTCCTCCCCTGGCGCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNGVSGLLELAGGGR*SRGLRRRSSPGAAL Trigger: CAAGGCGGCGCCAGGGGAGGAGCGGCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS TCA 90 bp | CTTCCTCATCCTCTGAGCAGTCCTGGCTGCTGGCCCGCTGGTCCGTaGGTGGAGAGGCGGGCGAGAGCTGCAAGGGTCCTCCGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPHPLSSPGCWPAGP*VERRARAARVLRPG Trigger: CCCCGGGCGGAGGACCCTTGCAGCTCTCGCCCGCCTCTCCACTCACGGACCAGCGGGCCAGCAGCCAGGACTGCTCAGAGGATGAGGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTAACGGCGTCAGCGGCTaGTTGGAGTTGGCGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QKPYRIARRGLPGRRRPRNGVSG*LELAGG Trigger: GCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTT...ACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | GCCTCCGAGTTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTaGCCGCTGGGGCCCAGTTTCTTGGCAGACTCCACGTCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASEFCSSSASATMSI*PLGPSFLADSTSAF Trigger: GAAGGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 90 bp | TCTTCATCTTCCTCATCCTCTGAGCAGTCCTGGCTGCTGGCCCGCTaGTCCGTGAGTGGAGAGGCGGGCGAGAGCTGCAAGGGTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSEQSWLLAR*SVSGEAGESCKGPP Trigger: CGGAGGACCCTTGCAGCTCTCGCCCGCCTCTCCACTCACGGACCAGCGGGCCAGCAGCCAGGACTGCTCAGAGGATGAGGAAGATGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | CCGCCGGCCGGCCCGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCTGGGGCCCAGTTTCTaGGCAGACTCCACGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAGPDLLLRKGRGGYQGLGPSF*ADSTSA Trigger: GGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCAG...CCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCGGGCCGGCCGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCTCGTGAGCCCCTTAAAGGTCTaGCTGGCGAGCTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSHTELHGEGFRGGGGLVSPLKV*LASSSK Trigger: CTTGGAGGAGCTCGCCAGCAAGACCTTTAAGGGGCT...CACGAGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | GTGAAGGCCGTGCGTGATTTTCGCCGTTTCTTGGGCGTCTGCCTCTaGCCAAAGATGGTCATCCCATCGCGGCCTTCGGCTGCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKAVRDFRRFLGVCL*PKMVIPSRPSAACR Trigger: CCTGCAGGCAGCCGAAGGCCGCGATGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 90 bp | AGTTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTGCCCGCTaGGGCCCAGTTTCTTGGCAGACTCCACGTCGGCCTTCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSARVRPAPRCPSAR*GPVSWQTPRRPSSP Trigger: AGGAGATGAAGGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCTTGGGTACAGTCGAAGAAAGAGAGGGCAAGGCAGGAGCTGGGAAAGAGCGGCTTGTTGGAGTaGGCGGGCGGCGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRPWVQSKKERARQELGKSGLLE*AGGGRW Trigger: CCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCT...CTTTCCCAGCTCCTGCCTTGCCCTCTCTTTCTTCGACTGTACCCAAGGCCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 90 bp | TGGTTGGTGAAGGCCGTGCGTGATTTTCGCCGTTTCTTGGGCGTCTaGCTCTGCCCAAAGATGGTCATCCCATCGCGGCCTTCGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WLVKAVRDFRRFLGV*LCPKMVIPSRPSAA Trigger: GGCAGCCGAAGGCCGCGATGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | CACCGTCAGCCGACCCGGCAGCACCCGGGCTTTGAAAACATCGAAATCTCTGAGCAGCTGCTGCGCAATTaGGTCGCGATCTGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRQPTRQHPGFENIEISEQLLRN*VAICRG Trigger: TCCCCGGCAGATCGCGACCAAATTGCGCAGCAGCTG...CTCAGAGATTTCGATGTTTTCAAAGCCCGGGTGCTGCCGGGTCGGCTGACGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | CGGATTTATTGCTTCGAAAAGGAAGAGGCGGCTATCAGGGGCCAAGCCCGGCCCGATTTTCGCCGTTTCTaGGGCGTCTGCCTCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RIYCFEKEEAAIRGQARPDFRRF*GVCLCP Trigger: TGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATC...GGGCCGGGCTTGGCCCCTGATAGCCGCCTCTTCCTTTTCGAAGCAATAAATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 90 bp | CAGGTGATGACCTGTGCATTGGTGAGGCCCAGCTGCTGCGCAATTTaGTCGCGATCTGCCGGGGACAGGTACTTCTGGTATAGAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QVMTCALVRPSCCAI*SRSAGDRYFWYRKR Trigger: ACGCTTTCTATACCAGAAGTACCTGTCCCCGGCAGATCGCGACCAAATTGCGCAGCAGCTGGGCCTCACCAATGCACAGGTCATCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS TCA 90 bp | GCGTTTCTCCAACTCGTAGATCTGGTGGTTGGTGAAGGCCGTGCGTaGTTTTCGCCGTTTCTTGGGCGTCTGCCTCTGCCCAAAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: AFLQLVDLVVGEGRA*FSPFLGRLPLPKDG Trigger: ACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCACCAGATCTACGAGTTGGAGAAACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS-3UTR CAA 90 bp | GGGCTTTGGGTTCTGTTTTCCATGACTGGTTGGGTGCTTCCCTGCTTTTTCCCTCTCCGCACGGACGGCTaGTTGAGGATGTCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLWVLFSMTGWVLPCFFPLRTDG*LRMSSM Trigger: CATCGAGGACATCCTCAACAAGCCGTCCGTGCGGAG...AGGGAAAAAGCAGGGAAGCACCCAACCAGTCATGGAAAACAGAACCCAAAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS TCA 90 bp | TCTGGTATAGAAAGCGTTTCTCCAACTCGTAGATCTGGTGGTTGGTaGAGGCCGTGCGTGATTTTCGCCGTTTCTTGGGCGTCTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGIESVSPTRRSGGW*RPCVIFAVSWASAS Trigger: AGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCACCAGATCTACGAGTTGGAGAAACGCTTTCTATACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 72 bp | TGGAGTTGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTaGGTCGCCGCTCCTCCCCTGGCGCCGCCTTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WSWRAAAGGPEG*VAAPPLAPPCR Trigger: ACGGCAAGGCGGCGCCAGGGGAGGAGCGGCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | GTCAGCGGCTTGTTGGAGTTGGCGGGCGGCGGCAGGTaGTCCAGAGGGCTGCGTCGCCGCTCCTCCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSGLLELAGGGR*SRGLRRRSSPG Trigger: GCCAGGGGAGGAGCGGCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 90 bp | TTGAGGATGTCCTCGATGCTGAACGGCGTCAGCGGCTTGTTGGAGTaGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTGCGTCGCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRMSSMLNGVSGLLE*AGGGRWSRGLRRRS Trigger: GGAGCGGCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGACATCCTCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 72 bp | TCCTCGATGCTGAACGGCGTCAGCGGCTTGTTGGAGTaGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSMLNGVSGLLE*AGGGRWSRGLR Trigger: ACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 90 bp | GGCTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGCGGCTTGTaGGAGTTGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTGCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLRMSSMLNGVSGL*ELAGGGRWSRGLRR Trigger: GCGACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | CGAGTTCGGCCAGCGCCACGATGTCCATCTGCCCGCTaGGGCCCAGTTTCTTGGCAGACTCCACGTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RVRPAPRCPSAR*GPVSWQTPRRP Trigger: AGGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | TCCTCATCCTCTGAGCAGTCCTGGCTGCTGGCCCGCTaGTCCGTGAGTGGAGAGGCGGGCGAGAGCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSEQSWLLAR*SVSGEAGESCK Trigger: CTTGCAGCTCTCGCCCGCCTCTCCACTCACGGACCAGCGGGCCAGCAGCCAGGACTGCTCAGAGGATGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 90 bp | GACGGCTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGCGGCTaGTTGGAGTTGGCGGGCGGCGGCAGGTGGTCCAGAGGGCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DGLLRMSSMLNGVSG*LELAGGGRWSRGLR Trigger: ACGCAGCCCTCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 90 bp | CCTTCGGCTGCCTGCAGGACGCTGACCTCCAGCCCCTTAAAGGTCTaGCTGGCGAGCTCCTCCAAGGCGCAGAGAGGCGAGGTCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSAACRTLTSSPLKV*LASSSKAQRGEVCE Trigger: CTCGCAGACCTCGCCTCTCTGCGCCTTGGAGGAGCTCGCCAGCAAGACCTTTAAGGGGCTGGAGGTCAGCGTCCTGCAGGCAGCCGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 72 bp | GCCTGCAGGACGCTGACCTCCAGCCCCTTAAAGGTCTaGCTGGCGAGCTCCTCCAAGGCGCAGAGAGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ACRTLTSSPLKV*LASSSKAQRGE Trigger: CTCGCCTCTCTGCGCCTTGGAGGAGCTCGCCAGCAAGACCTTTAAGGGGCTGGAGGTCAGCGTCCTGCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 72 bp | TTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTaGCCGCTGGGGCCCAGTTTCTTGGCAGACTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FCSSSASATMSI*PLGPSFLADST Trigger: CGTGGAGTCTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 72 bp | TTGAGGATGTCCTCGATGCTGAACGGCGTCAGCGGCTaGTTGGAGTTGGCGGGCGGCGGCAGGTGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRMSSMLNGVSG*LELAGGGRWSR Trigger: TCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGACATCCTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | TTCGCCGTTTCTTGGGCGTCTGCCTCTGCCCAAAGATaGTCATCCCATCGCGGCCTTCGGCTGCCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FAVSWASASAQR*SSHRGLRLPAG Trigger: TCCTGCAGGCAGCCGAAGGCCGCGATGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | CCACGATGTCCATCTGCCCGCTGGGGCCCAGTTTCTTaGCAGACTCCACGTCGGCCTTCATCTCCTCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRCPSARWGPVS*QTPRRPSSPLG Trigger: ACCTAGAGGAGATGAAGGCCGACGTGGAGTCTGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 72 bp | GTGCGTGATTTTCGCCGTTTCTTGGGCGTCTGCCTCTaGCCAAAGATGGTCATCCCATCGCGGCCTTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRDFRRFLGVCL*PKMVIPSRPSA Trigger: AGCCGAAGGCCGCGATGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS GCA 72 bp | AAGGCCGTGCGTGATTTTCGCCGTTTCTTGGGCGTCTaGCTCTGCCCAAAGATGGTCATCCCATCGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KAVRDFRRFLGV*LCPKMVIPSRP Trigger: AGGCCGCGATGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 72 bp | GACCTGTGCATTGGTGAGGCCCAGCTGCTGCGCAATTaGGTCGCGATCTGCCGGGGACAGGTACTTCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DLCIGEAQLLRN*VAICRGQVLLV Trigger: TACCAGAAGTACCTGTCCCCGGCAGATCGCGACCAAATTGCGCAGCAGCTGGGCCTCACCAATGCACAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS TCA 72 bp | CAACTCGTAGATCTGGTGGTTGGTGAAGGCCGTGCGTaGTTTTCGCCGTTTCTTGGGCGTCTGCCTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLVDLVVGEGRA*FSPFLGRLPLP Trigger: GGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCACCAGATCTACGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CCA 72 bp | ACCTGTGCATTGGTGAGGCCCAGCTGCTGCGCAATTTaGTCGCGATCTGCCGGGGACAGGTACTTCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: TCALVRPSCCAI*SRSAGDRYFWY Trigger: ATACCAGAAGTACCTGTCCCCGGCAGATCGCGACCAAATTGCGCAGCAGCTGGGCCTCACCAATGCACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS CAA 72 bp | TGGTTGGTGAAGGCCGTGCGTGATTTTCGCCGTTTCTaGGGCGTCTGCCTCTGCCCAAAGATGGTCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLVKAVRDFRRF*GVCLCPKMVIP Trigger: TGGGATGACCATCTTTGGGCAGAGGCAGACGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||
| CDS TCA 72 bp | GAAAGCGTTTCTCCAACTCGTAGATCTGGTGGTTGGTaGAGGCCGTGCGTGATTTTCGCCGTTTCTTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ESVSPTRRSGGW*RPCVIFAVSWA Trigger: CGCCCAAGAAACGGCGAAAATCACGCACGGCCTTCACCAACCACCAGATCTACGAGTTGGAGAAACGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099401.6 |
||