Pregenerated sensors for LBR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004880Ensembl transcript IDs: ENSMUST00000005003.12, ENSMUST00000191878.6, ENSMUST00000193030.6, ENSMUST00000194415.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTACGGGCACAGCCACTTaGCACTCTAAGCTACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSTGTAT*HSKLQS Trigger: GCTCTGTAGCTTAGAGTGTCAAGTGGCTGTGCCCGT...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTACTTTCCCTTGTTTCTaGGAGAGGTCTGAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLTFPCF*ERSELP Trigger: TGGCAGCTCAGACCTCTCCCAGAAACAAGGGAAAGT...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR TCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTCACACACCTGCAAATTaGGGTAGCAAAGCCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLHTPAN*GSKAKF Trigger: GAATTTGGCTTTGCTACCTCAATTTGCAGGTGTGTG...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAATGCACTTTTAAAGGCTaGAGTGGAGTCACTGCTATG | + |
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Preference number: 2 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKCTFKG*SGVTAM Trigger: CATAGCAGTGACTCCACTTCAGCCTTTAAAAGTGCA...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAGTCCTGCAAGTAATCTaGCCTTATTCTTCAGCTATA | + |
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Preference number: 2 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKVLQVI*PYSSAI Trigger: TATAGCTGAAGAATAAGGGCAGATTACTTGCAGGAC...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAATCCTTATGTTTACTCTaGGGACAATGTAGCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKSLCLL*GQCSFE Trigger: TTCAAAGCTACATTGTCCTCAGAGTAAACATAAGGA...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR CCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCAAAAGATGTACTATTTaGCTCTATAGTCCTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: TCGMCNRNPNVHTICIASKRCTI*LYSPDS Trigger: TGAGTCAGGACTATAGAGCCAAATAGTACATCTTTT...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACGCTATAACACCAATATaGGGCTGGGTTTTGCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PFQNQAKNPKLFPCKLINAITPI*GWVLLD Trigger: ATCAAGCAAAACCCAGCCCAATATTGGTGTTATAGC...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACGAAGACCTGAATATTTaGCATCTAGCTCACATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFQNQAKNPKLFPCKLINEDLNI*HLAHMW Trigger: CCACATGTGAGCTAGATGCAAAATATTCAGGTCTTC...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| 3UTR GCA 72 bp | TATGAATGGTCCTTTAAACAGGTCCTGCAAGTAATCTaGCCTTATTCTTCAGCTATAACACCAATATTGGGC | + |
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Preference number: 3 (lower is better) Translates to: YEWSFKQVLQVI*PYSSAITPILG Trigger: GCCCAATATTGGTGTTATAGCTGAAGAATAAGGGCAGATTACTTGCAGGACCTGTTTAAAGGACCATTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAATTGAGCGGCTGCGGCTaGGGCTGCCACGGCGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKLSGCG*GCHGVE Trigger: CTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAA...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAAGCCCCGGGTCCTTCTaGCTGCACTGCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKSPGSF*LHCSSS Trigger: GCTGCTGCTGCAGTGCAGGCAGAAGGACCCGGGGCT...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTCCCGGTGGCTGCCAGTaGCAACTGCAGGAAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSPGGCQ*QLQEVS Trigger: ACTCACTTCCTGCAGTTGGCACTGGCAGCCACCGGG...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTGGAGAACCCGGTGGCTaGCAGTGCCAACTGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSGEPGG*QCQLQE Trigger: TTCCTGCAGTTGGCACTGGCAGCCACCGGGTTCTCC...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCAGAGGTGGAGGGAAGTaGAGCAGCCCCGGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSRGGGK*SSPGSF Trigger: GAAGGACCCGGGGCTGCTCCACTTCCCTCCACCTCT...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTGTGGTTGAAACCACATaGGAGGGACCACGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLVVETT*EGPRQS Trigger: GCTCTGGCGTGGTCCCTCCCATGTGGTTTCAACCAC...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAACCGGGTCCTTCTGCCTaGACTGCAGCAGCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKPGPSA*TAAAAR Trigger: TCTTGCTGCTGCTGCAGTGCAGGCAGAAGGACCCGG...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAGGCCGTACTTCCTCCTaGACTGGTGTTCATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKGRTSS*TGVHPG Trigger: CCCGGGATGAACACCAGTGCAGGAGGAAGTACGGCC...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCAAACGCCGCACACCCTaGGTTCCCACAGCTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSKRRTP*VPTARG Trigger: TCCACGAGCTGTGGGAACCCAGGGTGTGCGGCGTTT...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTGTGCGGGTCCTTTGGTaGCAAGGTTTTGTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLVRVLW*QGFVPQ Trigger: CTGAGGAACAAAACCTTGTCACCAAAGGACCCGCAC...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTGATGACAGAAGCCAATaGCCAGGACAAGTCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLDDRSQ*PGQVMG Trigger: CCCCATGACTTGTCCTGGCCATTGGCTTCTGTCATC...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCTCCCGGGCCTCTCGATaGATAAGCAAGGCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSSRASR*ISKAVK Trigger: CTTCACCGCCTTGCTTATCCATCGAGAGGCCCGGGA...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCAGTCATGGGGATGGCTaGCCAGGTAAAAGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSSHGDG*PGKRPG Trigger: TCCAGGCCTTTTACCTGGTCAGCCATCCCCATGACT...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACAGCTGCTCCCAGGGCTaGAGATGTCAGAATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PFQNQAKNPKLFPCKLINSCSQG*RCQNEG Trigger: GCCTTCATTCTGACATCTGCAGCCCTGGGAGCAGCT...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAAAGCCAAAGCCGTCGTaGATGATGTCCATGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKKPKPS*MMSMEV Trigger: GACCTCCATGGACATCATGCACGACGGCTTTGGCTT...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACTACTTCCTCCTGCACTaGTGTTCATCCCGGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PFQNQAKNPKLFPCKLINYFLLH*CSSRAS Trigger: AGAGGCCCGGGATGAACACCAGTGCAGGAGGAAGTA...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTCTATTTCTTTGGCTTTaGCCTCTTCTCTCCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSLFLWL*PLLSWD Trigger: GTCCCAGGAGAGAAGAGGTCAAAGCCAAAGAAATAG...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTGGAGCAGCTCGCTCCTaGATTTTCATTTCCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSGAARS*IFISIR Trigger: TCTGATGGAAATGAAAATTCAGGAGCGAGCTGCTCC...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTGGAGTCAGCTTAACTTaGAGAATTTCCCTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLGVSLT*RISLLI Trigger: GATGAGGAGGGAAATTCTGCAAGTTAAGCTGACTCC...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAAAAGGTTCCCAAAGGTaGGGGTCCTTTGGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKKGSQR*GSFGDK Trigger: CTTGTCACCAAAGGACCCGCACCTTTGGGAACCTTT...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACAAATGTAGGGGAATATaGGGTAGGGCACTCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PFQNQAKNPKLFPCKLINKCRGI*GRALAG Trigger: GCCAGCGAGTGCCCTACCGCATATTCCCCTACATTT...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAAAGTATGGCAGGAGGTaGTTGAAACCACATGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKKYGRR*LKPHGR Trigger: CCTCCCATGTGGTTTCAACCACCTCCTGCCATACTT...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTCGGAATGCATTTTTCTaGGAGTTTGCACAACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSRNAFF*EFAQRK Trigger: CTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCG...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCATGGCAGGAGGTGGTTaGAACCACATGGGAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASMAGGG*NHMGGT Trigger: GGTCCCTCCCATGTGGTTTCAACCACCTCCTGCCAT...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCTCCTTCTGCCTGCACTaGAGCAGCAGCAAGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASSFCLH*SSSKRT Trigger: CGTCCTCTTGCTGCTGCTGCAGTGCAGGCAGAAGGA...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCACCCCAGAAGACAGCTaGTCCCAGGGCTGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASTPEDS*SQGCRC Trigger: ACATCTGCAGCCCTGGGAGCAGCTGTCTTCTGGGGT...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTACTCACAAAAGAACTTaGGATCGAAAGCACCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSTHKRT*DRKHQV Trigger: GACTTGGTGCTTTCGATCTCAAGTTCTTTTGTGAGT...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCTTCCCCGTGGAAGTATaGATGGTCTTCAAATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSFPVEV*MVFKCA Trigger: TGCACATTTGAAGACCATTCATACTTCCACGGGGAA...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAACAAGCTTTGGATCAGTaGGATTCTTCCGGAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKQALDQ*DSSGMH Trigger: ATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTG...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCGCAGACTTTTCCCCGTaGAAGTATGAATGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSADFSP*KYEWSS Trigger: TGAAGACCATTCATACTTCCACGGGGAAAAGTCTGC...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAAAATGGTCTTCAAATGTaGAAGCTTTGGATCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKNGLQM*KLWISG Trigger: CCCACTGATCCAAAGCTTGCACATTTGAAGACCATT...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCGGTCACCCAAGTAATTaGGATGGCGAACAAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASGHPSN*DGEQSP Trigger: GGGGCTTTGTTCGCCATCCCAATTACTTGGGTGACC...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCGATAATGTAGAAGTATaGCAGGAGGTGGTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSDNVEV*QEVVET Trigger: GGTTTCAACCACCTCCTGCCATACTTCTACATTATC...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR TCA 90 bp | CCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTATTAACCTGCAGATGTCAGAATaGAGGCATACAATCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: PFQNQAKNPKLFPCKLINLQMSE*RHTIHS Trigger: TGAATGGATTGTATGCCTTCATTCTGACATCTGCAG...GTTAATAAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCCCTTCCTCTGTGGAGTaGTCACTTGAAAGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASPSSVE*SLERFP Trigger: TGGGAACCTTTCAAGTGACCACTCCACAGAGGAAGG...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS-3UTR CCA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAACCATTCAGTCTATACTaGAGTCTTCTTCCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKPFSLY*SLLPST Trigger: TGTTGATGGAAGAAGACTCCAGTATAGACTGAATGG...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTACCACATATAAGAGCTaGAAACTGTTAACCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSTTYKS*KLLTKI Trigger: GATCTTGGTTAACAGTTTCCAGCTCTTATATGTGGT...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCCAAATGTGCAAGCTTTaGATCAGTGGGATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASQMCKL*ISGILP Trigger: CGGAAGAATCCCACTGATCCAAAGCTTGCACATTTG...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| 3UTR CAA 72 bp | AGTTGTTTCCTTGTAAGCTTATTAACACATACCATGTaGATTCCAGCAGAAAGCATGATAGAAAACCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCFLVSLLTHTM*IPAESMIENHL Trigger: CAGGTGGTTTTCTATCATGCTTTCTGCTGGAATCAACATGGTATGTGTTAATAAGCTTACAAGGAAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR TCA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCCTTCTGTTGACAAAATaGTTCTTTCCTGCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCGMCNRNPNVHTICIASLLLTK*FFPACL Trigger: AAGACAAGCAGGAAAGAATCATTTTGTCAACAGAAG...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| 3UTR CAA 72 bp | TGTGTAATAGAAACCCAAATGTACACACTATATGTATaGCATCCTTATGTTTACTCTGAGGACAATGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVIETQMYTLYV*HPYVYSEDNVA Trigger: AGCTACATTGTCCTCAGAGTAAACATAAGGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | AGAGCCGGCAGAGGTGGAGGGAAGTGGAGCAGCCCCGGGTCCTTCTaGCTGCACTGCAGCAGCAGCAAGAGGACGCAGGCGGGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGRGGGKWSSPGSF*LHCSSSKRTQAGRP Trigger: GGGCCTGCCCGCCTGCGTCCTCTTGCTGCTGCTGCAGTGCAGGCAGAAGGACCCGGGGCTGCTCCACTTCCCTCCACCTCTGCCGGCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | GTGCTCTGCCCGGGGATCGGGAACGTGATCTTGAGCGGCTGCGGCTaGGGCTGCCACGGCGTCGAGAGGGAGAGCTGGAAATCGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLCPGIGNVILSGCG*GCHGVERESWKSSH Trigger: GTGGCTCGATTTCCAGCTCTCCCTCTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS GCA 90 bp | CTTTCGGTGCTCTGCCCGGGGATCGGGAACGTGATCTTGAGCGGCTaGGGCTGCGGCTGCCACGGCGTCGAGAGGGAGAGCTGGAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: LSVLCPGIGNVILSG*GCGCHGVERESWKS Trigger: CGATTTCCAGCTCTCCCTCTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS GCA 90 bp | AGAGGTGGAGGGAAGTGGAGCAGCCCCGGGTCCTTCTGCCTGCACTaGAGCAGCAGCAAGAGGACGCAGGCGGGCAGGCCCAGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGGGKWSSPGSFCLH*SSSKRTQAGRPSMM Trigger: CATCATGCTGGGCCTGCCCGCCTGCGTCCTCTTGCTGCTGCTGCAGTGCAGGCAGAAGGACCCGGGGCTGCTCCACTTCCCTCCACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | TGCCCGGGGATCGGGAACGTGATCTTGAGCGGCTGCGGCTGCGGCTaGCACGGCGTCGAGAGGGAGAGCTGGAAATCGAGCCACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPGIGNVILSGCGCG*HGVERESWKSSHFF Trigger: GAAAAAGTGGCTCGATTTCCAGCTCTCCCTCTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS GCA 90 bp | CCTCATGGGAAGCAGAGACGGATCTTCTGGAGCCTTTCGGTGCTCTaGCCGGGGATCGGGAACGTGATCTTGAGCGGCTGCGGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHGKQRRIFWSLSVL*PGIGNVILSGCGCG Trigger: GCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAGGCTCCAGAAGATCCGTCTCTGCTTCCCATGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CCA 90 bp | AGAGAGCTTGAACGAAAAACCAGAGGAGGTAAACGCCGCACACCCTaGGTTCCCACAGCTCGTGGAGAGCCGGCAGAGGTGGAGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RELERKTRGGKRRTP*VPTARGEPAEVEGS Trigger: ACTTCCCTCCACCTCTGCCGGCTCTCCACGAGCTGTGGGAACCCAGGGTGTGCGGCGTTTACCTCCTCTGGTTTTTCGTTCAAGCTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS CCA 90 bp | CTCTCGGCCAATGAAGAAGTCGTAGACAGCATTTCCGGAACTGGCTaGCGACAGCTCCTCCCTCGGGGCTCGCAGAGAGCGAACATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSANEEVVDSISGTG*RQLLPRGSQRANIE Trigger: CTCTATGTTCGCTCTCTGCGAGCCCCGAGGGAGGAGCTGTCGCCAGCCAGTTCCGGAAATGCTGTCTACGACTTCTTCATTGGCCGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS CCA 90 bp | TCTTCTCCTTCACGTCACCCTCATGGGAAGCAGAGACGGATCTTCTaGAGCCTTTCGGTGCTCTGCCCGGGGATCGGGAACGTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSPSRHPHGKQRRIF*SLSVLCPGIGNVIL Trigger: CAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAGGCTCCAGAAGATCCGTCTCTGCTTCCCATGAGGGTGACGTGAAGGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CCA 90 bp | GAGGACCGCACCAGGTACTCCTCCAAACTCCAAGTCCTTCCTCTGTaGAGTGGTCACTTGAAAGGTTCCCAAAGGTGCGGGTCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EDRTRYSSKLQVLPL*SGHLKGSQRCGSFG Trigger: ACCAAAGGACCCGCACCTTTGGGAACCTTTCAAGTGACCACTCCACAGAGGAAGGACTTGGAGTTTGGAGGAGTACCTGGTGCGGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS CCA 90 bp | AGCAGTGCTTCCTCATTCCAGAGGGCGTCCACCACATATAAGAGCTaGAAACTGTTAACCAAGATCATTGCCAAGGACGGAGCAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSASSFQRASTTYKS*KLLTKIIAKDGAAR Trigger: GCGAGCTGCTCCGTCCTTGGCAATGATCTTGGTTAACAGTTTCCAGCTCTTATATGTGGTGGACGCCCTCTGGAATGAGGAAGCACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | GAAGTGAGTGTACAGGTAGCACAGCTCAACACCCCAGAAGACAGCTaGTCCCAGGGCTGCAGATGTCAGAATGAAGGCATACAATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: EVSVQVAQLNTPEDS*SQGCRCQNEGIQSI Trigger: AATGGATTGTATGCCTTCATTCTGACATCTGCAGCCCTGGGAGCAGCTGTCTTCTGGGGTGTTGAGCTGTGCTACCTGTACACTCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | GAAGTGAGTGTACAGGTAGCACAGCTCAACACCCCAGAAGACAGCTaGTCCCAGGGCATTCAGTCTATACTGGAGTCTTCTTCCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EVSVQVAQLNTPEDS*SQGIQSILESSSIN Trigger: GTTGATGGAAGAAGACTCCAGTATAGACTGAATGCCCTGGGAGCAGCTGTCTTCTGGGGTGTTGAGCTGTGCTACCTGTACACTCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194415.2 |
||
| CDS CCA 90 bp | GATTACATATCCACACAATTTCAGAGCAATGATGACAGAAGCCAATaGCCAGGACAAGTCATGGGGATGGCTGACCAGGTAAAAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DYISTQFQSNDDRSQ*PGQVMGMADQVKGL Trigger: CAGGCCTTTTACCTGGTCAGCCATCCCCATGACTTGTCCTGGCCATTGGCTTCTGTCATCATTGCTCTGAAATTGTGTGGATATGTAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | CCACGGCGTCGAGAGGGAGAGCTGGAAATCGAGCCACTTTTTCTTTaGTTAAAGGATTTTAAAGGCTTGATATCACTCTCCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRREGELEIEPLFL*LKDFKGLISLSFSS Trigger: GGAACTGAAGGAGAGTGATATCAAGCCTTTAAAATCCTTTAAGCAAAGAAAAAGTGGCTCGATTTCCAGCTCTCCCTCTCGACGCCGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCCTGTGGAGTGGTCACTaGAAAGGTTCCCAAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSLWSGH*KGSQRC Trigger: GCACCTTTGGGAACCTTTCAAGTGACCACTCCACAG...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTAAACGGAGTCAGCTTAACTaGCAGAATTTCCCTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRKHDRKPPAEHLRTSKRSQLN*QNFPPH Trigger: ATGAGGAGGGAAATTCTGCAAGTTAAGCTGACTCCG...TTTACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGAACACCTTAGGACTAGTAAAACAGTAAAGAATGACAGAATGCAGAGCATGATTCTTTCCTGCTaGTCTTTATACGGCGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAEHLRTSKTVKNDRMQSMILSC*SLYGVA Trigger: CGCTACGCCGTATAAAGACAAGCAGGAAAGAATCAT...GCTCTGCATTCTGTCATTCTTTACTGTTTTACTAGTCCTAAGGTGTTCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTTCAGACTCTATTTCTTaGGCTTTGACCTCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSSDSIS*ALTSSL Trigger: GAGAGAAGAGGTCAAAGCCAAAGAAATAGAGTCTGA...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | ACATGTGGTATGTGTAATAGAAACCCAAATGTACACACTATATGTATTGCATCCTATGGCAGGAGGTGGTaGAAACCACATGGGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TCGMCNRNPNVHTICIASYGRRW*KPHGRD Trigger: GTCCCTCCCATGTGGTTTCAACCACCTCCTGCCATA...GGATGCAATACATATAGTGTGTACATTTGGGTTTCTATTACACATACCACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS TCA 90 bp | AAACTGTTAACCAAGATCATTGCCAAGGACGGAGCAGCTCGCTCCTaGATTTTCATTTCCATCAGAAGCATCACTAAGTTAATAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KLLTKIIAKDGAARS*IFISIRSITKLITT Trigger: GGTGGTTATTAACTTAGTGATGCTTCTGATGGAAATGAAAATTCAGGAGCGAGCTGCTCCGTCCTTGGCAATGATCTTGGTTAACAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 90 bp | GGTCTTCAAATGTGCAAGCTTTGGATCAGTGGGATTCTTCCGGAATaGATTTTTCTGAGAGTTTGCACAACGGAAGATTACATATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLQMCKLWISGILPE*IFLRVCTTEDYIST Trigger: TGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTGCACATTTGAAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | GATTCCAGCAGAAAGCATGATAGAAAACCACCTGCTGAACACCTTAGGACTAGTTTTGGTGACAAGGTTTaGTTCCTCAGACTCTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSRKHDRKPPAEHLRTSFGDKV*FLRLYF Trigger: GAAATAGAGTCTGAGGAACAAAACCTTGTCACCAAA...ACTAGTCCTAAGGTGTTCAGCAGGTGGTTTTCTATCATGCTTTCTGCTGGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS-3UTR CAA 90 bp | TGTCCGCCCTTTCAGAACCAGGCAAAGAACCCAAAGTTGTTTCCTTGTAAGCTTCATTTTTCTGAGAGTTaGCACAACGGAAGATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: CPPFQNQAKNPKLFPCKLHFSES*HNGRLH Trigger: ATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATG...AAGCTTACAAGGAAACAACTTTGGGTTCTTTGCCTGGTTCTGAAAGGGCGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS TCA 90 bp | TGTGCAAGCTTTGGATCAGTGGGATTCTTCCGGAATGCATTTTTCTaGGAGTTTGCACAACGGAAGATTACATATCCACACAATTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CASFGSVGFFRNAFF*EFAQRKITYPHNFR Trigger: TCTGAAATTGTGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 90 bp | CTTTGGATCAGTGGGATTCTTCCGGAATGCATTTTTCTGAGAGTTTaGACAACGGAAGATTACATATCCACACAATTTCAGAGCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWISGILPECIFLRV*TTEDYISTQFQSND Trigger: ATCATTGCTCTGAAATTGTGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS GCA 72 bp | CTCTGCCCGGGGATCGGGAACGTGATCTTGAGCGGCTaGGGCTGCGGCTGCCACGGCGTCGAGAGGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCPGIGNVILSG*GCGCHGVERES Trigger: GCTCTCCCTCTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS GCA 72 bp | GGGAAGTGGAGCAGCCCCGGGTCCTTCTGCCTGCACTaGAGCAGCAGCAAGAGGACGCAGGCGGGCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GKWSSPGSFCLH*SSSKRTQAGRP Trigger: GGGCCTGCCCGCCTGCGTCCTCTTGCTGCTGCTGCAGTGCAGGCAGAAGGACCCGGGGCTGCTCCACTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS CAA 72 bp | CTTTCGGTGCTCTGCCCGGGGATCGGGAACGTGATCTaGAGCGGCTGCGGCTGCGGCTGCCACGGCGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSVLCPGIGNVI*SGCGCGCHGVE Trigger: CTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CAA 90 bp | TTCTGGAGCCTTTCGGTGCTCTGCCCGGGGATCGGGAACGTGATCTaGAGCGGCTGCGGCTGCGGCTGCCACGGCGTCGAGAGGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FWSLSVLCPGIGNVI*SGCGCGCHGVERES Trigger: GCTCTCCCTCTCGACGCCGTGGCAGCCGCAGCCGCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAGGCTCCAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CCA 72 bp | CCTGGGTTCCCACAGCTCGTGGAGAGCCGGCAGAGGTaGAGGGAAGTGGAGCAGCCCCGGGTCCTTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGFPQLVESRQR*REVEQPRVLLP Trigger: AGGCAGAAGGACCCGGGGCTGCTCCACTTCCCTCCACCTCTGCCGGCTCTCCACGAGCTGTGGGAACCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 72 bp | AGAGGTGGAGGGAAGTGGAGCAGCCCCGGGTCCTTCTaGCTGCACTGCAGCAGCAGCAAGAGGACGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGGGKWSSPGSF*LHCSSSKRTQA Trigger: CGCCTGCGTCCTCTTGCTGCTGCTGCAGTGCAGGCAGAAGGACCCGGGGCTGCTCCACTTCCCTCCACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 72 bp | AAGCAGAGACGGATCTTCTGGAGCCTTTCGGTGCTCTaGCCGGGGATCGGGAACGTGATCTTGAGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KQRRIFWSLSVL*PGIGNVILSGC Trigger: GCAGCCGCTCAAGATCACGTTCCCGATCCCCGGGCAGAGCACCGAAAGGCTCCAGAAGATCCGTCTCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CCA 72 bp | TCACGTCACCCTCATGGGAAGCAGAGACGGATCTTCTaGAGCCTTTCGGTGCTCTGCCCGGGGATCGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRHPHGKQRRIF*SLSVLCPGIGN Trigger: GTTCCCGATCCCCGGGCAGAGCACCGAAAGGCTCCAGAAGATCCGTCTCTGCTTCCCATGAGGGTGACGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005003.12 ENSMUST00000191878.6 ENSMUST00000193030.6 |
||
| CDS CCA 72 bp | GAACGAAAAACCAGAGGAGGTAAACGCCGCACACCCTaGGTTCCCACAGCTCGTGGAGAGCCGGCAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERKTRGGKRRTP*VPTARGEPAEV Trigger: CACCTCTGCCGGCTCTCCACGAGCTGTGGGAACCCAGGGTGTGCGGCGTTTACCTCCTCTGGTTTTTCGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 72 bp | AGCACTCAGGAGCACGGAGAACCCGGTGGCTGCCAGTaGCAACTGCAGGAAGTGAGTGTACAGGTAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: STQEHGEPGGCQ*QLQEVSVQVAQ Trigger: CTGTGCTACCTGTACACTCACTTCCTGCAGTTGGCACTGGCAGCCACCGGGTTCTCCGTGCTCCTGAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS CCA 72 bp | AATGAAGAAGTCGTAGACAGCATTTCCGGAACTGGCTaGCGACAGCTCCTCCCTCGGGGCTCGCAGAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NEEVVDSISGTG*RQLLPRGSQRA Trigger: CGCTCTCTGCGAGCCCCGAGGGAGGAGCTGTCGCCAGCCAGTTCCGGAAATGCTGTCTACGACTTCTTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 72 bp | GAGGTAAGCACTCAGGAGCACGGAGAACCCGGTGGCTaGCAGTGCCAACTGCAGGAAGTGAGTGTACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EVSTQEHGEPGG*QCQLQEVSVQV Trigger: TACCTGTACACTCACTTCCTGCAGTTGGCACTGGCAGCCACCGGGTTCTCCGTGCTCCTGAGTGCTTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS CCA 72 bp | CATAGAGGTAAGCACTCAGGAGCACGGAGAACCCGGTaGCTGCCAGTGCCAACTGCAGGAAGTGAGTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: HRGKHSGARRTR*LPVPTAGSECT Trigger: TGTACACTCACTTCCTGCAGTTGGCACTGGCAGCCACCGGGTTCTCCGTGCTCCTGAGTGCTTACCTCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
||
| CDS GCA 72 bp | GTACAGGTAGCACAGCTCAACACCCCAGAAGACAGCTaGTCCCAGGGCTGCAGATGTCAGAATGAAGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: VQVAQLNTPEDS*SQGCRCQNEGI Trigger: TATGCCTTCATTCTGACATCTGCAGCCCTGGGAGCAGCTGTCTTCTGGGGTGTTGAGCTGTGCTACCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
||
| CDS CCA 72 bp | ACCAGGTACTCCTCCAAACTCCAAGTCCTTCCTCTGTaGAGTGGTCACTTGAAAGGTTCCCAAAGGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TRYSSKLQVLPL*SGHLKGSQRCG Trigger: CCCGCACCTTTGGGAACCTTTCAAGTGACCACTCCACAGAGGAAGGACTTGGAGTTTGGAGGAGTACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS TCA 72 bp | CGAAAGCACCAAGTCGCGGGTTTAACTCTCGGCCAATaGAGAAGTCGTAGACAGCATTTCCGGAACTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RKHQVAGLTLGQ*RSRRQHFRNWL Trigger: CAGCCAGTTCCGGAAATGCTGTCTACGACTTCTTCATTGGCCGAGAGTTAAACCCGCGACTTGGTGCTTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
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| CDS GCA 72 bp | GTACAGGTAGCACAGCTCAACACCCCAGAAGACAGCTaGTCCCAGGGCATTCAGTCTATACTGGAGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VQVAQLNTPEDS*SQGIQSILESS Trigger: AGAAGACTCCAGTATAGACTGAATGCCCTGGGAGCAGCTGTCTTCTGGGGTGTTGAGCTGTGCTACCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194415.2 |
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| CDS CCA 72 bp | TCCACACAATTTCAGAGCAATGATGACAGAAGCCAATaGCCAGGACAAGTCATGGGGATGGCTGACCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: STQFQSNDDRSQ*PGQVMGMADQV Trigger: TACCTGGTCAGCCATCCCCATGACTTGTCCTGGCCATTGGCTTCTGTCATCATTGCTCTGAAATTGTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 90 bp | ATAACCACCCATCCAATCAATCCAGGGCGCAACTCACAAAAGAACTaGAGATCGAAAGCACCAAGTCGCGGGTTTAACTCTCGGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: ITTHPINPGRNSQKN*RSKAPSRGFNSRPM Trigger: CATTGGCCGAGAGTTAAACCCGCGACTTGGTGCTTTCGATCTCAAGTTCTTTTGTGAGTTGCGCCCTGGATTGATTGGATGGGTGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
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| CDS CCA 72 bp | TCCTCATTCCAGAGGGCGTCCACCACATATAAGAGCTaGAAACTGTTAACCAAGATCATTGCCAAGGACGGA | + |
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Preference number: 6 (lower is better) Translates to: SSFQRASTTYKS*KLLTKIIAKDG Trigger: TCCGTCCTTGGCAATGATCTTGGTTAACAGTTTCCAGCTCTTATATGTGGTGGACGCCCTCTGGAATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 72 bp | GGTTCCCAAAGGTGCGGGTCCTTTGGTGACAAGGTTTaGTTCCTCAGACTCTATTTCTTTGGCTTTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: GSQRCGSFGDKV*FLRLYFFGFDL Trigger: GAGGTCAAAGCCAAAGAAATAGAGTCTGAGGAACAAAACCTTGTCACCAAAGGACCCGCACCTTTGGGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 90 bp | CACTTGAAAGGTTCCCAAAGGTGCGGGTCCTTTGGTGACAAGGTTTaGTTCCTCAGACTCTATTTCTTTGGCTTTGACCTCTTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLKGSQRCGSFGDKV*FLRLYFFGFDLFSP Trigger: AGGAGAGAAGAGGTCAAAGCCAAAGAAATAGAGTCTGAGGAACAAAACCTTGTCACCAAAGGACCCGCACCTTTGGGAACCTTTCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS TCA 72 bp | ATCCAATCAATCCAGGGCGCAACTCACAAAAGAACTTaGGATCGAAAGCACCAAGTCGCGGGTTTAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: IQSIQGATHKRT*DRKHQVAGLTL Trigger: GAGAGTTAAACCCGCGACTTGGTGCTTTCGATCTCAAGTTCTTTTGTGAGTTGCGCCCTGGATTGATTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
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| CDS CAA 72 bp | CATCCAATCAATCCAGGGCGCAACTCACAAAAGAACTaGAGATCGAAAGCACCAAGTCGCGGGTTTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: HPINPGRNSQKN*RSKAPSRGFNS Trigger: AGAGTTAAACCCGCGACTTGGTGCTTTCGATCTCAAGTTCTTTTGTGAGTTGCGCCCTGGATTGATTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005003.12 ENSMUST00000194415.2 |
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| CDS TCA 72 bp | TCACTTGAAAGGTTCCCAAAGGTGCGGGTCCTTTGGTaGCAAGGTTTTGTTCCTCAGACTCTATTTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLERFPKVRVLW*QGFVPQTLFLW Trigger: CCAAAGAAATAGAGTCTGAGGAACAAAACCTTGTCACCAAAGGACCCGCACCTTTGGGAACCTTTCAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS TCA 72 bp | CATCCGGAAACAAGCAGACTTTTCCCCGTGGAAGTATaGATGGTCTTCAAATGTGCAAGCTTTGGATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: HPETSRLFPVEV*MVFKCASFGSV Trigger: CACTGATCCAAAGCTTGCACATTTGAAGACCATTCATACTTCCACGGGGAAAAGTCTGCTTGTTTCCGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CCA 72 bp | CGGAAACAAGCAGACTTTTCCCCGTGGAAGTATGAATaGTCTTCAAATGTGCAAGCTTTGGATCAGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RKQADFSPWKYE*SSNVQALDQWD Trigger: ATCCCACTGATCCAAAGCTTGCACATTTGAAGACCATTCATACTTCCACGGGGAAAAGTCTGCTTGTTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS GCA 72 bp | ATGTGCAAGCTTTGGATCAGTGGGATTCTTCCGGAATaGATTTTTCTGAGAGTTTGCACAACGGAAGATTAC | + |
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Preference number: 6 (lower is better) Translates to: MCKLWISGILPE*IFLRVCTTEDY Trigger: GTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTGCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CCA 72 bp | CGTGGAAGTATGAATGGTCTTCAAATGTGCAAGCTTTaGATCAGTGGGATTCTTCCGGAATGCATTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGSMNGLQMCKL*ISGILPECIFL Trigger: CAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTGCACATTTGAAGACCATTCATACTTCCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 72 bp | CCGTGGAAGTATGAATGGTCTTCAAATGTGCAAGCTTaGGATCAGTGGGATTCTTCCGGAATGCATTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PWKYEWSSNVQA*DQWDSSGMHFS Trigger: AGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAAGCTTGCACATTTGAAGACCATTCATACTTCCACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 90 bp | GTAACTATATATCTGTCTTCTGTTGACAAAATGATTCTTTCCTGCTaGTCTTTATACGGCGTAGCGTTCTTCTCCATGTGTTCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VTIYLSSVDKMILSC*SLYGVAFFSMCSGS Trigger: GGAGCCCGAACACATGGAGAAGAACGCTACGCCGTATAAAGACAAGCAGGAAAGAATCATTTTGTCAACAGAAGACAGATATATAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS TCA 72 bp | TTTGGATCAGTGGGATTCTTCCGGAATGCATTTTTCTaGGAGTTTGCACAACGGAAGATTACATATCCACAC | + |
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Preference number: 6 (lower is better) Translates to: FGSVGFFRNAFF*EFAQRKITYPH Trigger: GTGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTGATCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CCA 72 bp | GTCAGAATGAAGGCATACAATCCATTCAGTCTATACTaGAGTCTTCTTCCATCAACAAGAGGTGTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VRMKAYNPFSLY*SLLPSTRGVPS Trigger: AGAAGGAACACCTCTTGTTGATGGAAGAAGACTCCAGTATAGACTGAATGGATTGTATGCCTTCATTCTGAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS GCA 72 bp | AGTGGGATTCTTCCGGAATGCATTTTTCTGAGAGTTTaGACAACGGAAGATTACATATCCACACAATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGILPECIFLRV*TTEDYISTQFQ Trigger: CTGAAATTGTGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 72 bp | TATCTGTCTTCTGTTGACAAAATGATTCTTTCCTGCTaGTCTTTATACGGCGTAGCGTTCTTCTCCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: YLSSVDKMILSC*SLYGVAFFSMC Trigger: ACACATGGAGAAGAACGCTACGCCGTATAAAGACAAGCAGGAAAGAATCATTTTGTCAACAGAAGACAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS CAA 72 bp | CAGTGGGATTCTTCCGGAATGCATTTTTCTGAGAGTTaGCACAACGGAAGATTACATATCCACACAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: QWDSSGMHFSES*HNGRLHIHTIS Trigger: TGAAATTGTGTGGATATGTAATCTTCCGTTGTGCAAACTCTCAGAAAAATGCATTCCGGAAGAATCCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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| CDS GCA 72 bp | ATATATCTGTCTTCTGTTGACAAAATGATTCTTTCCTaGTTGTCTTTATACGGCGTAGCGTTCTTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: IYLSSVDKMILS*LSLYGVAFFSM Trigger: CATGGAGAAGAACGCTACGCCGTATAAAGACAAGCAGGAAAGAATCATTTTGTCAACAGAAGACAGATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005003.12 |
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