Pregenerated sensors for LBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016024Ensembl transcript IDs: ENSMUST00000016168.9, ENSMUST00000109491.8, ENSMUST00000129811.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCTCCCACCCAGTGTTGGAGAGGGCCCTTCCTGGAGAAGTCAGTaGGGGGAGGGGCCCTTCCTGGAGGATGGGACGGAGTCAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GLPPSVGEGPSWRSQ*GEGPFLEDGTESSP Trigger: TGGACTTGACTCCGTCCCATCCTCCAGGAAGGGCCCCTCCCCTCACTGACTTCTCCAGGAAGGGCCCTCTCCAACACTGGGTGGGAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 90 bp | GAGAGGGCCCTTCCTGGAGAAGTCAGTGAGGGGAGGGGCCCTTCCTaGAGGATGGGACGGAGTCAAGTCCAGGTCAAGGGTGCACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ERALPGEVSEGRGPS*RMGRSQVQVKGAPA Trigger: AGCAGGTGCACCCTTGACCTGGACTTGACTCCGTCCCATCCTCCAGGAAGGGCCCCTCCCCTCACTGACTTCTCCAGGAAGGGCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 90 bp | GAGAGAAAGAAACTCGGGACTCGGACTCCGGCCCCCACTGGGGCCTaGGTTACACCTGTCTGTCCATCATGTGGTCTTTCTGATGACCCA | + |
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Preference number: 1 (lower is better) Translates to: ERKKLGTRTPAPTGA*VTPVCPSCGLSDDP Trigger: TGGGTCATCAGAAAGACCACATGATGGACAGACAGGTGTAACCCAGGCCCCAGTGGGGGCCGGAGTCCGAGTCCCGAGTTTCTTTCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR TCA 90 bp | GGGTCAGGGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTTaGGACTCTCCAGAGATGTGCTGTACATCTGGAATTACAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: GSGPTRARSRNIFVF*DSPEMCCTSGITNG Trigger: GCCATTTGTAATTCCAGATGTACAGCACATCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCCCTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR GCA 90 bp | AGTCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTaGAGCAAACAGCAACCATGGAAGAGATACCTGTGGAAACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SRGSLPFCFCSGPVV*SKQQPWKRYLWKQS Trigger: GCTTTGTTTCCACAGGTATCTCTTCCATGGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 90 bp | CGCAGGCATGTGGCTCGTGAACAGCAGTCCGATGAGTTTTTGATTTaGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTA | + |
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Preference number: 1 (lower is better) Translates to: RRHVAREQQSDEFLI*VQPKPSLDPSLAHL Trigger: TAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGACTGCTGTTCACGAGCCACATGCCTGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 90 bp | AGAGACCACAGCTCCGGCAAGCATCTAAGACTGGCTCAGACCAGATaGAAGAGCAATAAAGAGGTTCAGCTGGGATGTTGTGATATTCTA | + |
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Preference number: 1 (lower is better) Translates to: RDHSSGKHLRLAQTR*KSNKEVQLGCCDIL Trigger: TAGAATATCACAACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTTGCCGGAGCTGTGGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGCGCCCTTCCTGGAGGATaGGACGGAGTCAAGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VGACHFAFVLGLLSAANSALPGG*DGVKSR Trigger: CCTGGACTTGACTCCGTCCCATCCTCCAGGAAGGGC...GCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CAA 90 bp | CACAGGCCTCCATGGGGACAGTCGTGGGAGCCTGCCATTTTGCTTTaGTTCTGGGCCTGTTGTCTGCAGCAAACAGCAACCATGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HRPPWGQSWEPAILL*FWACCLQQTATMEE Trigger: CTCTTCCATGGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGACTGTCCCCATGGAGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR TCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACACAAGGGTGCACCTGCTaGAGAGGACTCTGGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SWEPAILLLFWACCLQQTQGCTC*RGLWGQ Trigger: CTGACCCCAGAGTCCTCTTCAGCAGGTGCACCCTTG...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTTCCTGGAGAAGTCAGTaGGGGGAGGGGCCCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPSWRSQ*GEGPFL Trigger: CAGGAAGGGCCCCTCCCCTCACTGACTTCTCCAGGA...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGCTCCAGCTGTGGCCACTaGGACCCATCTTTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VGACHFAFVLGLLSAANSSSCGH*DPSFFL Trigger: CAAGAAGAAAGATGGGTCTCAGTGGCCACAGCTGGA...GCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTTCTCCCACCCAGTGTTaGAGAGGGCCCTTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCSPTQC*RGPFLE Trigger: CTCCAGGAAGGGCCCTCTCCAACACTGGGTGGGAGA...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CAA 90 bp | GGGACAGTCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTaGTCTGCAGCAAACAGCAACCATGGAAGAGATACCTGTGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GTVVGACHFAFVLGL*SAANSNHGRDTCGN Trigger: GTTTCCACAGGTATCTCTTCCATGGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGACTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CAA 90 bp | GGGGTCAGGGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTaGAGACTCTCCAGAGATGTGCTGTACATCTGGAATTACAAATGG | + |
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Preference number: 2 (lower is better) Translates to: GVRAHPSQEQKHLCI*RLSRDVLYIWNYKW Trigger: CCATTTGTAATTCCAGATGTACAGCACATCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCCCTGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CAA 90 bp | TCTCCTCGCAGGCATGTGGCTCGTGAACAGCAGTCCGATGAGTTTTaGATTTGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SPRRHVAREQQSDEF*IWVQPKPSLDPSLA Trigger: AGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGACTGCTGTTCACGAGCCACATGCCTGCGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGCGACTCTCCAGAGATGTaGTGTACATCTGGAATTACA | + |
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Preference number: 2 (lower is better) Translates to: VGACHFAFVLGLLSAANSDSPEM*CTSGIT Trigger: TGTAATTCCAGATGTACAGCACATCTCTGGAGAGTC...GCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTGCACCCTGTCAAACATaGAGGTCAGATGGTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPAPCQT*RSDGEF Trigger: AAATTCACCATCTGACCTTCATGTTTGACAGGGTGC...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR CCA 90 bp | TCCGATGAGTTTTTGATTTGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTCTGGCTCAGACCAGATaGAAGAGCAATAAAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SDEFLIWVQPKPSLDPSLLAQTR*KSNKEV Trigger: AACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAG...AAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR TCA 90 bp | TCCGATGAGTTTTTGATTTGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTAACATCTTTGTATTTTaGGACTCTCCAGAGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: SDEFLIWVQPKPSLDPSLNIFVF*DSPEMC Trigger: GCACATCTCTGGAGAGTCTCAAAATACAAAGATGTT...AAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 72 bp | CTTCCTGGAGAAGTCAGTGAGGGGAGGGGCCCTTCCTaGAGGATGGGACGGAGTCAAGTCCAGGTCAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPGEVSEGRGPS*RMGRSQVQVKG Trigger: ACCCTTGACCTGGACTTGACTCCGTCCCATCCTCCAGGAAGGGCCCCTCCCCTCACTGACTTCTCCAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR TCA 72 bp | CTGATGAGCTGTCTCCCAGTCCTGCGCCATGAGCTCTaGCTGTCCCTAAGCTTACAGCTCCTGGTCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LMSCLPVLRHEL*LSLSLQLLVRA Trigger: GGCCCTGACCAGGAGCTGTAAGCTTAGGGACAGTCAGAGCTCATGGCGCAGGACTGGGAGACAGCTCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR CCA 72 bp | AAACTCGGGACTCGGACTCCGGCCCCCACTGGGGCCTaGGTTACACCTGTCTGTCCATCATGTGGTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KLGTRTPAPTGA*VTPVCPSCGLS Trigger: AGAAAGACCACATGATGGACAGACAGGTGTAACCCAGGCCCCAGTGGGGGCCGGAGTCCGAGTCCCGAGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR TCA 72 bp | AGGGTCACTGATGAGCTGTCTCCCAGTCCTGCGCCATaGGCTCTGACTGTCCCTAAGCTTACAGCTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: RVTDELSPSPAP*ALTVPKLTAPG Trigger: ACCAGGAGCTGTAAGCTTAGGGACAGTCAGAGCTCATGGCGCAGGACTGGGAGACAGCTCATCAGTGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR CCA 72 bp | GAGAGACCAGAGCGGTCAAGAGCCCACATGGAAGTGTaGCAAGCACAAGCCATGTTCAGGCTGAGGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ERPERSRAHMEV*QAQAMFRLRRE Trigger: CTCTCTCCTCAGCCTGAACATGGCTTGTGCTTGCCACACTTCCATGTGGGCTCTTGACCGCTCTGGTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR CCA 72 bp | GGACAGTCGTGGGAGCCTGCCATTTTGCTTTTGTTCTaGGCCTGTTGTCTGCAGCAAACAGCAACCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: GQSWEPAILLLF*ACCLQQTATME Trigger: TTCCATGGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGACTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 72 bp | TTGGATCCATCTCTTGCTCACTTACACAGGCCTCCATaGGGACAGTCGTGGGAGCCTGCCATTTTGCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LDPSLAHLHRPP*GQSWEPAILLL Trigger: CAAAAGCAAAATGGCAGGCTCCCACGACTGTCCCCATGGAGGCCTGTGTAAGTGAGCAAGAGATGGATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR-3UTR CAA 90 bp | AGACAGGATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGGGAGCAGAAACATCTTaGTATTTTGAGACTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RQDKGLVMNTRPSAGEGRGAETS*YFETLQ Trigger: CTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCC...CCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR TCA 72 bp | ATGGTGAATTTAAAACCACAGTGCCCGCTCTTAAAGTaGTTCCAGGTCTCCCACCCAGTGTTGGAGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: MVNLKPQCPLLK*FQVSHPVLERA Trigger: GGCCCTCTCCAACACTGGGTGGGAGACCTGGAATCACTTTAAGAGCGGGCACTGTGGTTTTAAATTCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR GCA 72 bp | AGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTaGAGCAAACAGCAACCATGGAAGAGATACCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SLPFCFCSGPVV*SKQQPWKRYLW Trigger: CCACAGGTATCTCTTCCATGGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 72 bp | AGCTCCGGCAAGCATCTAAGACTGGCTCAGACCAGATaGAAGAGCAATAAAGAGGTTCAGCTGGGATGTTGT | + |
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Preference number: 3 (lower is better) Translates to: SSGKHLRLAQTR*KSNKEVQLGCC Trigger: ACAACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTTGCCGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR TCA 72 bp | GGCATGTGGCTCGTGAACAGCAGTCCGATGAGTTTTTaGTTTGGGTCCAACCAAAACCTTCCTTGGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: GMWLVNSSPMSF*FGSNQNLPWIH Trigger: ATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGACTGCTGTTCACGAGCCACATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR TCA 72 bp | ATATCTGTGTTTCCCAATGGTCTTAGGTGGCCCTTGTaGAACACATTTACTGCCCCAAAGGGGTCACAACCC | + |
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Preference number: 3 (lower is better) Translates to: ISVFPNGLRWPL*NTFTAPKGSQP Trigger: GGGTTGTGACCCCTTTGGGGCAGTAAATGTGTTTCACAAGGGCCACCTAAGACCATTGGGAAACACAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| 3UTR CCA 72 bp | TGTATTTTGAGACTCTCCAGAGATGTGCTGTACATCTaGAATTACAAATGGCCGGTCCAGCTGTGGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: CILRLSRDVLYI*NYKWPVQLWPL Trigger: CAGTGGCCACAGCTGGACCGGCCATTTGTAATTCCAGATGTACAGCACATCTCTGGAGAGTCTCAAAATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR TCA 72 bp | TTGAGGACCTACAAAGTGCCAGCACCCTGTCAAACATaGAGGTCAGATGGTGAATTTAAAACCACAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LRTYKVPAPCQT*RSDGEFKTTVP Trigger: GGGCACTGTGGTTTTAAATTCACCATCTGACCTTCATGTTTGACAGGGTGCTGGCACTTTGTAGGTCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| 3UTR CCA 72 bp | GTGGCTCGTGAACAGCAGTCCGATGAGTTTTTGATTTaGGTCCAACCAAAACCTTCCTTGGATCCATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VAREQQSDEFLI*VQPKPSLDPSL Trigger: AAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGACTGCTGTTCACGAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | GGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGTGTGTGTGTGTCCACCAGCCCCTCCTTaGCCGCGTAGGCCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GPSDEHQAKCWGRAVCVCPPAPP*PRRPGP Trigger: AGGGCCTGGCCTACGCGGCCAAGGAGGGGCTGGTGG...ACACACACACACCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | ACAGCTCCTGGTCAGGGCCTCTCTCTGAGGGAGAGCACAGACAGCCACTTCCCACCACCAGCCCCTCCTTaGCCGCGTAGGCCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TAPGQGLSLRESTDSHFPPPAPP*PRRPGP Trigger: AGGGCCTGGCCTACGCGGCCAAGGAGGGGCTGGTGG...TGGGAAGTGGCTGTCTGTGCTCTCCCTCAGAGAGAGGCCCTGACCAGGAGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAGGGCCTCTCTCTGAGGGAGAGCACAGACAGCCACTTCCCAAGGACACCAGGCCCTTGTCGGTaGTCCTGGCCACCACACCGG | + |
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Preference number: 4 (lower is better) Translates to: PGQGLSLRESTDSHFPRTPGPCR*SWPPHR Trigger: CCGGTGTGGTGGCCAGGATCACCGACAAGGGCCTGG...TGTCCTTGGGAAGTGGCTGTCTGTGCTCTCCCTCAGAGAGAGGCCCTGACCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| CDS-3UTR GCA 90 bp | AAACTCGGGACTCGGACTCCGGCCCCCACTGGGGCCTGGGTTACACCTGTCTGTTTGTACAGCTCTCTCTaGAGAGCCACCAGCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLGTRTPAPTGAWVTPVCLYSSL*RATSPS Trigger: GGAGGGGCTGGTGGCTCTGCAGAGAGAGCTGTACAA...ACAGACAGGTGTAACCCAGGCCCCAGTGGGGGCCGGAGTCCGAGTCCCGAGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTCAGGGCCTCTCTCTGAGGGAGAGCACAGACAGCCACTTCCCAAGGACAGCGAGACTCAGGCCCTaGCCTGGGAGCAGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGQGLSLRESTDSHFPRTARLRP*PGSSFR Trigger: TCTGAAGCTGCTCCCAGGCCAGGGCCTGAGTCTCGC...TGTCCTTGGGAAGTGGCTGTCTGTGCTCTCCCTCAGAGAGAGGCCCTGACCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| CDS-3UTR GCA 90 bp | AGTCAAGTCCAGGTCAAGGGTGCACCTGCTGAAGAGGACTCTGGGGTCAGGGCCTTGTACAGCTCTCTCTaGAGAGCCACCAGCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SQVQVKGAPAEEDSGVRALYSSL*RATSPS Trigger: GGAGGGGCTGGTGGCTCTGCAGAGAGAGCTGTACAA...GGCCCTGACCCCAGAGTCCTCTTCAGCAGGTGCACCCTTGACCTGGACTTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR TCA 90 bp | GATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGTGTGTGTCGAGGTCGTGGAGCTaGATATGCCTTGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: DKGLVMNTRPSAGEGRCVSRSWS*ICLGRG Trigger: CCCTCTGCCAAGGCATATTCAGCTCCACGACCTCGA...CACACACCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR GCA 90 bp | AGACAGGATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGCACAAATGCGGCTGCTaGACCCAGAGGCAGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: RQDKGLVMNTRPSAGEGRHKCGC*TQRQRL Trigger: CAGTCTCTGCCTCTGGGTGCAGCAGCCGCATTTGTG...CCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATCCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR TCA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTCCAGGCCCTTGTCGGTaGTCCTGGCCACCACACCGG | + |
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Preference number: 4 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPPGPCR*SWPPHR Trigger: CCGGTGTGGTGGCCAGGATCACCGACAAGGGCCTGG...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR TCA 90 bp | GGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGTGTGTGTGTGTACAGATTCCCAGGACTaGCATTCAGAATCGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GPSDEHQAKCWGRAVCVCTDSQD*HSESGQ Trigger: CTGCCCCGATTCTGAATGTCAGTCCTGGGAATCTGT...ACACACACACACCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | AGCACAGACAGCCACTTCCCAAGGACAGCTCTACCTCATGGGAGTCCCAGCCTTCGCCAGTTCCCTGTATaGACAGGAACAGCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: STDSHFPRTALPHGSPSLRQFPV*TGTAAP Trigger: TGGGGCTGCTGTTCCTGTCCATACAGGGAACTGGCG...AAGGCTGGGACTCCCATGAGGTAGAGCTGTCCTTGGGAAGTGGCTGTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
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| CDS-3UTR GCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGCCCTGAGGGATCCATaGCCAGGAGGAGGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTALRDP*PGGGPL Trigger: CAGTGGACCTCCTCCTGGGCATGGATCCCTCAGGGC...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAAGTCCAGGTCAAGGGTGCACCTGCTGAAGAGGACTCTGGGGTCAGGGCCCCACCCCACATTTCCTaGTATGTGCACATCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQVQVKGAPAEEDSGVRAPPHIS*YVHIQI Trigger: GATTTGGATGTGCACATATCAGGAAATGTGGGGTGG...GGCCCTGACCCCAGAGTCCTCTTCAGCAGGTGCACCCTTGACCTGGACTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGGATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGGACATTGTCGATCTCTaGTGTGACTGGCAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQDKGLVMNTRPSAGEGRDIVDL*CDWQSL Trigger: CAGACTCTGCCAGTCACAGCAGAGATCGACAATGTC...CCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTTGAGACTCTCCAGAGAATGACATCCAGCACCTaGGCCTTCGCTTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPPEPGAETSLYFETLQRMTSST*AFAWGA Trigger: GGCTCCCCAAGCGAAGGCCCAGGTGCTGGATGTCAT...TCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| 3UTR CAA 72 bp | CCATGGGGACAGTCGTGGGAGCCTGCCATTTTGCTTTaGTTCTGGGCCTGTTGTCTGCAGCAAACAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PWGQSWEPAILL*FWACCLQQTAT Trigger: GGTTGCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGACTGTCCCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTTGAGACTCTCCAGAGATGGAAGAGTCAGAGATaGCGAGACTCAGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPPEPGAETSLYFETLQRWKSQR*RDSGPG Trigger: GCCAGGGCCTGAGTCTCGCCATCTCTGACTCTTCCA...TCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTCTTCATGGGGCTACCTCATCTAAGGGCTGGAATGCTAATGGCCCCGAATTGGAAGAGTCAGAGATaGCGAGACTCAGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVFMGLPHLRAGMLMAPNWKSQR*RDSGPG Trigger: GCCAGGGCCTGAGTCTCGCCATCTCTGACTCTTCCA...ATTCGGGGCCATTAGCATTCCAGCCCTTAGATGAGGTAGCCCCATGAAGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109491.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTGGGAGGGGGAAGCCCTaGGCCAGCTCAGCATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCGRGKP*ASSALT Trigger: TGTCAATGCTGAGCTGGCCCAGGGCTTCCCCCTCCC...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGAGCTGAATATGCCTTaGCAGAGGGAGGGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTELNMP*QREGEA Trigger: GGCTTCCCCCTCCCTCTGCCAAGGCATATTCAGCTC...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | GATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGTGTGTGGGAACAGGTTCACATTaGACATGCCGACTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DKGLVMNTRPSAGEGRCVGTGSH*TCRLWI Trigger: AATCCAAAGTCGGCATGTTCAATGTGAACCTGTTCC...CACACACCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTACTCAGGCCCTGGCCTaGGAGCAGCTTCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCTQALA*EQLQRG Trigger: TCCTCTCTGAAGCTGCTCCCAGGCCAGGGCCTGAGT...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACATGTCGATCTCTGCTGTaGCTGGCAGAGTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTCRSLL*LAESGD Trigger: ATCTCCAGACTCTGCCAGTCACAGCAGAGATCGACA...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | AGACAGGATAAGGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGGTTGAAGGCATAATCTaGGATGGCAAAGTAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQDKGLVMNTRPSAGEGRVEGII*DGKVDH Trigger: ATGGTCTACTTTGCCATCTCAGATTATGCCTTCAAC...CCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCCTTATCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTGGGCCAGCTCAGCATTaGCATCAGGGTAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCGPAQH*HQGRGC Trigger: ACAGCCTCTACCCTGATGTCAATGCTGAGCTGGCCC...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTTGAGACTCTCCAGAGATTCGATCTCCATCTGTaGGGCCAAGGACAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPPEPGAETSLYFETLQRFDLHL*GQGQIP Trigger: GGGAATCTGTCCTTGGCCCCACAGATGGAGATCGAA...TCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTCCCGGCTGGCTATGTTaGAGGCATAATCTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPPGWLC*RHNLRW Trigger: CCATCTCAGATTATGCCTTCAACATAGCCAGCCGGG...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | AAGCATCTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGCGCCAGTTCCCTGTATaGACAGGAACAGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHLRLAQTRWKSNKEVQLRQFPV*TGTAAP Trigger: TGGGGCTGCTGTTCCTGTCCATACAGGGAACTGGCG...CAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | TCCGATGAGTTTTTGATTTGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCGAGACTCAGGCCCTaGCCTGGGAGCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDEFLIWVQPKPSLDPSLARLRP*PGSSFR Trigger: TCTGAAGCTGCTCCCAGGCCAGGGCCTGAGTCTCGC...AAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | GACCACAGCTCCGGCAAGCATCTAAGACTGGCTCAGACCAGATGGAAGAGCAATAGCTTCGACTCGATCTaGTTGTGGAAGAGATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHSSGKHLRLAQTRWKSNSFDSI*LWKRFS Trigger: GCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCT...ATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTTGCCGGAGCTGTGGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| 3UTR CAA 72 bp | GGTCAGGGCCCACCCGAGCCAGGAGCAGAAACATCTTaGTATTTTGAGACTCTCCAGAGATGTGCTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGPPEPGAETS*YFETLQRCAVH Trigger: ATGTACAGCACATCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCCCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| 3UTR CAA 72 bp | TTTGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTaGCTCACTTACACAGGCCTCCATGGGGACAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FGSNQNLPWIHL*LTYTGLHGDSR Trigger: ACGACTGTCCCCATGGAGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTTGGTGTTCAACCGGATaGCGGAGTCATGTGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPWCSTG*RSHVVT Trigger: TGTTACCACATGACTCCGGCATCCGGTTGAACACCA...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACATTCTCCAGTACTTTCTaGAGCTTCGACTCGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTFSSTF*SFDSIW Trigger: CCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAA...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTGACTCGATCTGGTTGTaGAAGAGATTCAGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCDSIWL*KRFSSH Trigger: GTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTC...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| 3UTR CAA 72 bp | GCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTaGAGACTCTCCAGAGATGTGCTGTACATCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHPSQEQKHLCI*RLSRDVLYIWN Trigger: ATTCCAGATGTACAGCACATCTCTGGAGAGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| 3UTR CAA 72 bp | AGGCATGTGGCTCGTGAACAGCAGTCCGATGAGTTTTaGATTTGGGTCCAACCAAAACCTTCCTTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHVAREQQSDEF*IWVQPKPSLDP Trigger: TGGATCCAAGGAAGGTTTTGGTTGGACCCAAATCAAAAACTCATCGGACTGCTGTTCACGAGCCACATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGAGGTCACAGACTTCTaGATCATCTCACAAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTEVTDF*IISQTL Trigger: TAAGGTTTGTGAGATGATCCAGAAGTCTGTGACCTC...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | GACCACAGCTCCGGCAAGCATCTAAGACTGGCTCAGACCAGATGGAAGAGCAATAGGCATAATCTGAGATaGCAAAGTAGACCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DHSSGKHLRLAQTRWKSNRHNLR*QSRPFA Trigger: AGCAAATGGTCTACTTTGCCATCTCAGATTATGCCT...ATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTTGCCGGAGCTGTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACACAGACTCTCATATACTaGACATTGGCACCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWEPAILLLFWACCLQQTQTLIY*TLAPKY Trigger: ATACTTGGGTGCCAATGTCCAGTATATGAGAGTCTG...TGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTAGTATAAGAAGTCCTTaGGGATCTGGAAGTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCSIRSP*GSGSRG Trigger: ACCTCGACTTCCAGATCCGCAAGGACTTCTTATACT...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCAGGGCCCACCCGAGCCAGGAGCAGAAACATCTTTGTATTTTGAGACTACATTTCCTGATATGTaGACATCCAAATCACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: WGQGPPEPGAETSLYFETTFPDM*TSKSQM Trigger: CATTTGTGATTTGGATGTGCACATATCAGGAAATGT...AGTCTCAAAATACAAAGATGTTTCTGCTCCTGGCTCGGGTGGGCCCTGACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR GCA 90 bp | AAGCATCTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGCCAAACTGTAGTCAATaGCCAGGACATTGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHLRLAQTRWKSNKEVQLPNCSQ*PGHCRS Trigger: AGATCGACAATGTCCTGGGCATTGACTACAGTTTGG...CAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS CCA 90 bp | CCTCGGACACCGATGGAAGAGTCAGAGATGGCGAGACTCAGGCCCTaGCCTGGGAGCAGCTTCAGAGAGGAGCCACGCAGCTCACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRTPMEESEMARLRP*PGSSFREEPRSSQF Trigger: GAACTGTGAGCTGCGTGGCTCCTCTCTGAAGCTGCTCCCAGGCCAGGGCCTGAGTCTCGCCATCTCTGACTCTTCCATCGGTGTCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000109491.8 |
||
| CDS CCA 90 bp | GTCCTTGCGGATCTGGAAGTCGAGGTCGTGGAGCTGAATATGCCTTaGCAGAGGGAGGGGGAAGCCCTGGGCCAGCTCAGCATTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: VLADLEVEVVELNMP*QREGEALGQLSIDI Trigger: GATGTCAATGCTGAGCTGGCCCAGGGCTTCCCCCTCCCTCTGCCAAGGCATATTCAGCTCCACGACCTCGACTTCCAGATCCGCAAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS CCA 90 bp | GTTTCAGGAAGGATTTGCGCACCTTCCATTTGCCTCGGACACCGATaGAAGAGTCAGAGATGGCGAGACTCAGGCCCTGGCCTGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSGRICAPSICLGHR*KSQRWRDSGPGLGA Trigger: TGCTCCCAGGCCAGGGCCTGAGTCTCGCCATCTCTGACTCTTCCATCGGTGTCCGAGGCAAATGGAAGGTGCGCAAATCCTTCCTGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS TCA 90 bp | AGCCTTCGATCTCCATCTGTGGGGCCAAGGACAGATTCCCAGGACTaGCATTCAGAATCGGGGCAGAGACCACTGTTCCAAGGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSPSVGPRTDSQD*HSESGQRPLFQGAP Trigger: TGGAGCTCCTTGGAACAGTGGTCTCTGCCCCGATTCTGAATGTCAGTCCTGGGAATCTGTCCTTGGCCCCACAGATGGAGATCGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CAA 90 bp | GGGCCTAGTGATGAACACCAGGCCAAGTGCTGGGGAAGGGCGGTGTGTGTGTGTAGTTTCAGGAAGGATTaGCGCACCTTCCATTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSDEHQAKCWGRAVCVCSFRKD*RTFHLP Trigger: AGGCAAATGGAAGGTGCGCAAATCCTTCCTGAAACT...ACACACACACACCGCCCTTCCCCAGCACTTGGCCTGGTGTTCATCACTAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTGGAGCTGAATATGCCTaGGCAGAGGGAGGGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPGAEYA*AEGGGS Trigger: GCTTCCCCCTCCCTCTGCCAAGGCATATTCAGCTCC...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS TCA 90 bp | CTCGATCTGGTTGTGGAAGAGATTCAGCAGCCACCCCACATTTCCTaGTATGTGCACATCCAAATCACAAATGCGGCTGCTGCACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LDLVVEEIQQPPHIS*YVHIQITNAAAAPR Trigger: TCTGGGTGCAGCAGCCGCATTTGTGATTTGGATGTGCACATATCAGGAAATGTGGGGTGGCTGCTGAATCTCTTCCACAACCAGATCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS TCA 90 bp | TGGTGTTCAACCGGATGCCGGAGTCATGTGGTAACATGTCATCTGTaGTGGAAAAATTCAGGTACCCAGCCTGGTGATAAACCCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCSTGCRSHVVTCHL*WKNSGTQPGDKPGW Trigger: CCAGCCGGGTTTATCACCAGGCTGGGTACCTGAATTTTTCCATCACAGATGACATGTTACCACATGACTCCGGCATCCGGTTGAACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000129811.2 |
||
| CDS TCA 90 bp | TCCACTGAAATGGTGACACCTTTGACATCCAGGTCAAAGGAGCCATaGAGTTTCAGGAAGGATTTGCGCACCTTCCATTTGCCTCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: STEMVTPLTSRSKEP*SFRKDLRTFHLPRT Trigger: TGTCCGAGGCAAATGGAAGGTGCGCAAATCCTTCCTGAAACTTCATGGCTCCTTTGACCTGGATGTCAAAGGTGTCACCATTTCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGCCTGCCATTTTGCTTTTGTTCTGGGCCTGTTGTCTGCAGCAAACAGCATGTCGGGATACTTTTaGTATATCTGGGGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGACHFAFVLGLLSAANSMSGYF*YIWGVK Trigger: CTTCACTCCCCAGATATACAAAAAGTATCCCGACAT...GCTGTTTGCTGCAGACAACAGGCCCAGAACAAAAGCAAAATGGCAGGCTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CAA 90 bp | CTAAGACTGGCTCAGACCAGATGGAAGAGCAATAAAGAGGTTCAGCTGGGATGTTTCGATCAGTCTCACTaGTGCCTTGTCTGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRLAQTRWKSNKEVQLGCFDQSH*CLVWMQ Trigger: CTGCATCCAGACAAGGCACAAGTGAGACTGATCGAA...ACATCCCAGCTGAACCTCTTTATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS GCA 90 bp | ATGCCGACTTTGGATTCGATCAGTCTCACTTGTGCCTTGTCTGGATaGAGCATCCCGGTAACCTTGCTGTTGTTGAAAGTTAATGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MPTLDSISLTCALSG*SIPVTLLLLKVNEA Trigger: TGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGCACAAGTGAGACTGATCGAATCCAAAGTCGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS CCA 90 bp | TCACAAACCTTATTCTCCAGTACTTTCTGGAGCTTCGACTCGATCTaGTTGTGGAAGAGATTCAGCAGCCACCCCACATTTCCTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: SQTLFSSTFWSFDSI*LWKRFSSHPTFPDM Trigger: CATATCAGGAAATGTGGGGTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAATAAGGTTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS CCA 90 bp | ACAGACTTCTGGATCATCTCACAAACCTTATTCTCCAGTACTTTCTaGAGCTTCGACTCGATCTGGTTGTGGAAGAGATTCAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TDFWIISQTLFSSTF*SFDSIWLWKRFSSH Trigger: GTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAATAAGGTTTGTGAGATGATCCAGAAGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
||
| CDS-3UTR CAA 90 bp | GACCACAGCTCCGGCAAGCATCTAAGACTGGCTCAGACCAGATGGAAGAGCAATGTAACCTTGCTGTTGTaGAAAGTTAATGAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DHSSGKHLRLAQTRWKSNVTLLL*KVNEAN Trigger: ATTTGCCTCATTAACTTTCAACAACAGCAAGGTTAC...ATTGCTCTTCCATCTGGTCTGAGCCAGTCTTAGATGCTTGCCGGAGCTGTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS-3UTR CAA 90 bp | TGGGTCCAACCAAAACCTTCCTTGGATCCATCTCTTGCTCACTTACACAGGCCTAGCATCCCGGTAACCTaGCTGTTGTTGAAAGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: WVQPKPSLDPSLAHLHRPSIPVT*LLLKVN Trigger: ATTAACTTTCAACAACAGCAAGGTTACCGGGATGCT...AGGCCTGTGTAAGTGAGCAAGAGATGGATCCAAGGAAGGTTTTGGTTGGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS TCA 90 bp | AAAAATTCAGGTACCCAGCCTGGTGATAAACCCGGCTGGCTATGTTaGAGGCATAATCTGAGATGGCAAAGTAGACCATTTGCTTACTGT | + |
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Preference number: 5 (lower is better) Translates to: KNSGTQPGDKPGWLC*RHNLRWQSRPFAYC Trigger: ACAGTAAGCAAATGGTCTACTTTGCCATCTCAGATTATGCCTTCAACATAGCCAGCCGGGTTTATCACCAGGCTGGGTACCTGAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000129811.2 |
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| CDS GCA 90 bp | ATTGACATCAGGGTAGAGGCTGTTGAGAAGGTAGTAGTTAAGGAATaGCTGGAACAGGTTCACATTGAACATGCCGACTTTGGATTCGAT | + |
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Preference number: 5 (lower is better) Translates to: IDIRVEAVEKVVVKE*LEQVHIEHADFGFD Trigger: ATCGAATCCAAAGTCGGCATGTTCAATGTGAACCTGTTCCAGGCATTCCTTAACTACTACCTTCTCAACAGCCTCTACCCTGATGTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | CACAAATGCGGCTGCTGCACCCAGAGGCAGAGACTGTaGGCCGCCCTGAGGGATCCATGCCCAGGAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: HKCGCCTQRQRL*AALRDPCPGGG Trigger: ACCTCCTCCTGGGCATGGATCCCTCAGGGCGGCCCACAGTCTCTGCCTCTGGGTGCAGCAGCCGCATTTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | CCGATGGAAGAGTCAGAGATGGCGAGACTCAGGCCCTaGCCTGGGAGCAGCTTCAGAGAGGAGCCACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PMEESEMARLRP*PGSSFREEPRS Trigger: GCTGCGTGGCTCCTCTCTGAAGCTGCTCCCAGGCCAGGGCCTGAGTCTCGCCATCTCTGACTCTTCCATCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000109491.8 |
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| CDS CCA 72 bp | CCACGCCAAGCCGGAAGACAGGTTCCCGGGCGGAGGTaGGCAGGATCACAAAGCCTTCGATCTCCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PRQAGRQVPGRR*AGSQSLRSPSV Trigger: CACAGATGGAGATCGAAGGCTTTGTGATCCTGCCCACCTCCGCCCGGGAACCTGTCTTCCGGCTTGGCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | GATCTGGAAGTCGAGGTCGTGGAGCTGAATATGCCTTaGCAGAGGGAGGGGGAAGCCCTGGGCCAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: DLEVEVVELNMP*QREGEALGQLS Trigger: GCTGAGCTGGCCCAGGGCTTCCCCCTCCCTCTGCCAAGGCATATTCAGCTCCACGACCTCGACTTCCAGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | AGGCCCTTGTCGGTGATCCTGGCCACCACACCGGGGTaGACACCGCCAGTTCCCTGTATGGACAGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: RPLSVILATTPG*TPPVPCMDRNS Trigger: GCTGTTCCTGTCCATACAGGGAACTGGCGGTGTCAACCCCGGTGTGGTGGCCAGGATCACCGACAAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000109491.8 |
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| CDS GCA 72 bp | TTCCTGATATGTGCACATCCAAATCACAAATGCGGCTaGTGCACCCAGAGGCAGAGACTGTGGGCCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FLICAHPNHKCG*CTQRQRLWAAL Trigger: CAGGGCGGCCCACAGTCTCTGCCTCTGGGTGCAGCAGCCGCATTTGTGATTTGGATGTGCACATATCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | ACCCTTAAACATGACATCCAGCACCTGGGCCTTCGCTaGGGGAGCCGCCACCAAACTGTAGTCAATGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TLKHDIQHLGLR*GSRHQTVVNAQ Trigger: CTGGGCATTGACTACAGTTTGGTGGCGGCTCCCCAAGCGAAGGCCCAGGTGCTGGATGTCATGTTTAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000129811.2 |
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| CDS CAA 72 bp | TCGATCTCCATCTGGGGAGTGAAGGGACGGAAGGCCTaGGTGTTCAACCGGATGCCGGAGTCATGTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SISIWGVKGRKA*VFNRMPESCGN Trigger: GTTACCACATGACTCCGGCATCCGGTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATGGAGATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129811.2 |
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| CDS TCA 72 bp | TCTCCATCTGTGGGGCCAAGGACAGATTCCCAGGACTaGCATTCAGAATCGGGGCAGAGACCACTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SPSVGPRTDSQD*HSESGQRPLFQ Trigger: TTGGAACAGTGGTCTCTGCCCCGATTCTGAATGTCAGTCCTGGGAATCTGTCCTTGGCCCCACAGATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | ACAAAGCCTTCGATCTCCATCTGGGGAGTGAAGGGACGGAAGGCCTaGGTGTTCAACCGGATGCCGGAGTCATGTGGTAACATGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TKPSISIWGVKGRKA*VFNRMPESCGNMSS Trigger: AGATGACATGTTACCACATGACTCCGGCATCCGGTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATGGAGATCGAAGGCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129811.2 |
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| CDS CAA 90 bp | AAAAATTTCACCCTTAAACATGACATCCAGCACCTGGGCCTTCGCTaGGGGAGCCGCCACCAAACTGTAGTCAATGCCCAGGACATTGTC | + |
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Preference number: 6 (lower is better) Translates to: KNFTLKHDIQHLGLR*GSRHQTVVNAQDIV Trigger: GACAATGTCCTGGGCATTGACTACAGTTTGGTGGCGGCTCCCCAAGCGAAGGCCCAGGTGCTGGATGTCATGTTTAAGGGTGAAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000129811.2 |
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| CDS CAA 72 bp | TTTTTGTATATCTGGGGAGTGAAGGGACGGAAGGCCTaGGTGTTCAACCGGATGCCGGAGTCATGTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: FLYIWGVKGRKA*VFNRMPESCGN Trigger: GTTACCACATGACTCCGGCATCCGGTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATATACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | TCGGGATACTTTTTGTATATCTGGGGAGTGAAGGGACGGAAGGCCTaGGTGTTCAACCGGATGCCGGAGTCATGTGGTAACATGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SGYFLYIWGVKGRKA*VFNRMPESCGNMSS Trigger: AGATGACATGTTACCACATGACTCCGGCATCCGGTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATATACAAAAAGTATCCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS GCA 72 bp | AAGAGATTCAGCAGCCACCCCACATTTCCTGATATGTaGACATCCAAATCACAAATGCGGCTGCTGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: KRFSSHPTFPDM*TSKSQMRLLHP Trigger: TGGGTGCAGCAGCCGCATTTGTGATTTGGATGTGCACATATCAGGAAATGTGGGGTGGCTGCTGAATCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | TTCTCCAGTACTTTCTGGAGCTTCGACTCGATCTGGTaGTGGAAGAGATTCAGCAGCCACCCCACATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FSSTFWSFDSIW*WKRFSSHPTFP Trigger: AGGAAATGTGGGGTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | GAGACCACTGTTCCAAGGAGCTCCAATTTCATGTCGGGATACTTTTaGTATATCTGGGGAGTGAAGGGACGGAAGGCCTTGGTGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ETTVPRSSNFMSGYF*YIWGVKGRKALVFN Trigger: GTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATATACAAAAAGTATCCCGACATGAAATTGGAGCTCCTTGGAACAGTGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | ACTTGTGCCTTGTCTGGATGCAGCATCCCGGTAACCTTGCTGTTGTaGAAAGTTAATGAGGCAAATACATTAGTGACCACGCCAAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TCALSGCSIPVTLLL*KVNEANTLVTTPSR Trigger: CCGGCTTGGCGTGGTCACTAATGTATTTGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGCACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS TCA 72 bp | GTTGTGGAAGAGATTCAGCAGCCACCCCACATTTCCTaGTATGTGCACATCCAAATCACAAATGCGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VVEEIQQPPHIS*YVHIQITNAAA Trigger: AGCAGCCGCATTTGTGATTTGGATGTGCACATATCAGGAAATGTGGGGTGGCTGCTGAATCTCTTCCACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | GACTTTGGATTCGATCAGTCTCACTTGTGCCTTGTCTaGATGCAGCATCCCGGTAACCTTGCTGTTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: DFGFDQSHLCLV*MQHPGNLAVVE Trigger: TTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGCACAAGTGAGACTGATCGAATCCAAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | GTTCCAAGGAGCTCCAATTTCATGTCGGGATACTTTTaGTATATCTGGGGAGTGAAGGGACGGAAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VPRSSNFMSGYF*YIWGVKGRKAL Trigger: CAAGGCCTTCCGTCCCTTCACTCCCCAGATATACAAAAAGTATCCCGACATGAAATTGGAGCTCCTTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | CAAACCTTATTCTCCAGTACTTTCTGGAGCTTCGACTCGATCTGGTaGTGGAAGAGATTCAGCAGCCACCCCACATTTCCTGATATGTGC | + |
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Preference number: 6 (lower is better) Translates to: QTLFSSTFWSFDSIW*WKRFSSHPTFPDMC Trigger: GCACATATCAGGAAATGTGGGGTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAATAAGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS TCA 72 bp | ATGGTGACACCTTTGACATCCAGGTCAAAGGAGCCATaGAGTTTCAGGAAGGATTTGCGCACCTTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: MVTPLTSRSKEP*SFRKDLRTFHL Trigger: CAAATGGAAGGTGCGCAAATCCTTCCTGAAACTTCATGGCTCCTTTGACCTGGATGTCAAAGGTGTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS GCA 72 bp | TATACTGGACATTGGCACCCAAGTATAAGAAGTCCTTaGGGATCTGGAAGTCGAGGTCGTGGAGCTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: YTGHWHPSIRSP*GSGSRGRGAEY Trigger: ATATTCAGCTCCACGACCTCGACTTCCAGATCCGCAAGGACTTCTTATACTTGGGTGCCAATGTCCAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | TTATTCTCCAGTACTTTCTGGAGCTTCGACTCGATCTaGTTGTGGAAGAGATTCAGCAGCCACCCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: LFSSTFWSFDSI*LWKRFSSHPTF Trigger: AAATGTGGGGTGGCTGCTGAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | AGCTCCAATTTCATGTCGGGATACTTTTTGTATATCTaGGGAGTGAAGGGACGGAAGGCCTTGGTGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SSNFMSGYFLYI*GVKGRKALVFN Trigger: GTTGAACACCAAGGCCTTCCGTCCCTTCACTCCCCAGATATACAAAAAGTATCCCGACATGAAATTGGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 90 bp | ATCAGTCTCACTTGTGCCTTGTCTGGATGCAGCATCCCGGTAACCTaGCTGTTGTTGAAAGTTAATGAGGCAAATACATTAGTGACCACG | + |
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Preference number: 6 (lower is better) Translates to: ISLTCALSGCSIPVT*LLLKVNEANTLVTT Trigger: CGTGGTCACTAATGTATTTGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGCACAAGTGAGACTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS TCA 72 bp | GTGATAAACCCGGCTGGCTATGTTGAAGGCATAATCTaGGATGGCAAAGTAGACCATTTGCTTACTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VINPAGYVEGII*DGKVDHLLTVL Trigger: GAGGACAGTAAGCAAATGGTCTACTTTGCCATCTCAGATTATGCCTTCAACATAGCCAGCCGGGTTTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016168.9 ENSMUST00000129811.2 |
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| CDS GCA 72 bp | AGGGTAGAGGCTGTTGAGAAGGTAGTAGTTAAGGAATaGCTGGAACAGGTTCACATTGAACATGCCGACTTT | + |
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Preference number: 6 (lower is better) Translates to: RVEAVEKVVVKE*LEQVHIEHADF Trigger: AAAGTCGGCATGTTCAATGTGAACCTGTTCCAGGCATTCCTTAACTACTACCTTCTCAACAGCCTCTACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | GCCTTGTCTGGATGCAGCATCCCGGTAACCTTGCTGTaGTTGAAAGTTAATGAGGCAAATACATTAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: ALSGCSIPVTLL*LKVNEANTLVT Trigger: GGTCACTAATGTATTTGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CCA 72 bp | TGGATCATCTCACAAACCTTATTCTCCAGTACTTTCTaGAGCTTCGACTCGATCTGGTTGTGGAAGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: WIISQTLFSSTF*SFDSIWLWKRF Trigger: GAATCTCTTCCACAACCAGATCGAGTCGAAGCTCCAGAAAGTACTGGAGAATAAGGTTTGTGAGATGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | TTGTCTGGATGCAGCATCCCGGTAACCTTGCTGTTGTaGAAAGTTAATGAGGCAAATACATTAGTGACCACG | + |
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Preference number: 6 (lower is better) Translates to: LSGCSIPVTLLL*KVNEANTLVTT Trigger: CGTGGTCACTAATGTATTTGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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| CDS CAA 72 bp | ACTTGTGCCTTGTCTGGATGCAGCATCCCGGTAACCTaGCTGTTGTTGAAAGTTAATGAGGCAAATACATTA | + |
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Preference number: 6 (lower is better) Translates to: TCALSGCSIPVT*LLLKVNEANTL Trigger: TAATGTATTTGCCTCATTAACTTTCAACAACAGCAAGGTTACCGGGATGCTGCATCCAGACAAGGCACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016168.9 |
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