Pregenerated sensors for LBHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096740Ensembl transcript IDs: ENSMUST00000187504.7
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AAAAAGATAGGGTCTTATAAAGCCCTGGAACTCAATGTGAGGCCTTaGACAGAGATCTGCCTGCCTCTCTGCCTGGCAAATGTTGGGATT | + |
Preference number: 1 (lower is better) Translates to: KKIGSYKALELNVRP*TEICLPLCLANVGI Trigger: AATCCCAACATTTGCCAGGCAGAGAGGCAGGCAGATCTCTGTTCAAGGCCTCACATTGAGTTCCAGGGCTTTATAAGACCCTATCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR TCA 90 bp | AAAAGTTTAAGGCCAGTGGTATTGTACACATTCAATCACAGCATTTaGGACAGGGGTAGGTGGATCTCTATAAGTTTGAGGCCAGCCAGT | + |
Preference number: 1 (lower is better) Translates to: KSLRPVVLYTFNHSI*DRGRWISISLRPAS Trigger: ACTGGCTGGCCTCAAACTTATAGAGATCCACCTACCCCTGTCTCAAATGCTGTGATTGAATGTGTACAATACCACTGGCCTTAAACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR CCA 90 bp | GCAGGCAGATTTCTGAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGGACGCCTGCCTCTCTGCCTaGCAAATGTTGGGATTAAAG | + |
Preference number: 2 (lower is better) Translates to: AGRFLKFEASLVYREFQDACLSA*QMLGLK Trigger: CTTTAATCCCAACATTTGCCAGGCAGAGAGGCAGGC...GTCCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR TCA 90 bp | TGCTGTGTGTATGGGGACATGTGCTTGCCACAATTCAAGTGTGGAAGCCAGAGGCATCTCACTGAGTGCTaGCTGGGAAATACAGGCCCT | + |
Preference number: 2 (lower is better) Translates to: CCVYGDMCLPQFKCGSQRHLTEC*LGNTGP Trigger: AGGGCCTGTATTTCCCAGTCAGCACTCAGTGAGATG...CCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATACACACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR CCA 90 bp | GCAGGCAGATTTCTGAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGGACAAAGGCCTTTCTACATaGCTCATCCCTGCTGCACTT | + |
Preference number: 2 (lower is better) Translates to: AGRFLKFEASLVYREFQDKGLST*LIPAAL Trigger: AAGTGCAGCAGGGATGAGCCATGTAGAAAGGCCTTT...GTCCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR CCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTACAGCTGGGCAGTGGTaGCGCACACCTTTAATCCCA | + |
Preference number: 2 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFTAGQW*RTPLIP Trigger: TGGGATTAAAGGTGTGCGCCACCACTGCCCAGCTGT...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR GCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTGAACAGAGATCTGCCTaGCTCTCTGCCTGGCAAATG | + |
Preference number: 2 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFEQRSA*LSAWQM Trigger: CATTTGCCAGGCAGAGAGGCAGGCAGATCTCTGTTC...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR GCA 90 bp | AGCCTCTTCTGGCCTCTGAAGACTCCAGGCATGCACTACATACATAGTGTACACAGGCATGCGCCACCATaGCTTCACTTTGTAGCTTCT | + |
Preference number: 2 (lower is better) Translates to: SLFWPLKTPGMHYIHSVHRHAPP*LHFVAS Trigger: AGAAGCTACAAAGTGAAGGCATGGTGGCGCATGCCT...GTGTACACTATGTATGTAGTGCATGCCTGGAGTCTTCAGAGGCCAGAAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR GCA 90 bp | AGCCTCTTCTGGCCTCTGAAGACTCCAGGCATGCACTACATACATAGTGTACACATCTGCCTGCCTCTCTaGCTGGCAAATGTTGGGATT | + |
Preference number: 2 (lower is better) Translates to: SLFWPLKTPGMHYIHSVHICLPL*LANVGI Trigger: AATCCCAACATTTGCCAGGCAGAGAGGCAGGCAGAT...GTGTACACTATGTATGTAGTGCATGCCTGGAGTCTTCAGAGGCCAGAAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR TCA 90 bp | GTAGAGTCAGCTCTTTCCACTATTTGGGTAACAGGGATAGAACTCAGATTGTTGAGGCAGGCAGATTTCTaGAGTTCGAGGCCAGCCTGG | + |
Preference number: 2 (lower is better) Translates to: VESALSTIWVTGIELRLLRQADF*SSRPAW Trigger: CCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGCCT...CAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGAAAGAGCTGACTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CAA 90 bp | GAGTCAGCTCTTTCCACTATTTGGGTAACAGGGATAGAACTCAGATaGTTGGGCTTGGGCCAAGTACCCTTACCCCTGAGTTACATCACT | + |
Preference number: 2 (lower is better) Translates to: ESALSTIWVTGIELR*LGLGQVPLPLSYIT Trigger: AGTGATGTAACTCAGGGGTAAGGGTACTTGGCCCAAGCCCAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGAAAGAGCTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | GTGCTGACTGGGAAATACAGGCCCTCAAGATGTAGATaGCACAGGGGTTGCCTCGAATGCAGGTACCCTGGG | + |
Preference number: 3 (lower is better) Translates to: VLTGKYRPSRCR*HRGCLECRYPG Trigger: CCCAGGGTACCTGCATTCGAGGCAACCCCTGTGCCATCTACATCTTGAGGGCCTGTATTTCCCAGTCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR CAA 90 bp | AGAGGGTGTCCCAGGGCAGCCAGGCTACAAAGATCTCCCGTCTCAAAAATAAAGTCTGCCTGGCAAATGTaGGGATTAAAGGCATGCGCC | + |
Preference number: 3 (lower is better) Translates to: RGCPRAARLQRSPVSKIKSAWQM*GLKACA Trigger: GGCGCATGCCTTTAATCCCAACATTTGCCAGGCAGA...CTTTATTTTTGAGACGGGAGATCTTTGTAGCCTGGCTGCCCTGGGACACCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR GCA 72 bp | GTTCAGGGGTTAGGAATACTTGGTGCTCTTTCAAAATaGTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTT | + |
Preference number: 3 (lower is better) Translates to: VQGLGILGALSK*SGSVPSTYVAV Trigger: AACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAAGTATTCCTAACCCCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR-3UTR CAA 90 bp | AGAGGGTGTCCCAGGGCAGCCAGGCTACAAAGATCTCCCGTCTCAAAAATAAAGAGCTTTTATCTTCTTTaGTTGCTTGGGCTGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: RGCPRAARLQRSPVSKIKSFYLL*LLGLWL Trigger: CAGCCACAGCCCAAGCAACAAAAGAAGATAAAAGCT...CTTTATTTTTGAGACGGGAGATCTTTGTAGCCTGGCTGCCCTGGGACACCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR GCA 72 bp | GTTTTGACACTTGCTGTGTGTATGGGGACATGTGCTTaGCACAATTCAAGTGTGGAAGCCAGAGGACAAGAG | + |
Preference number: 3 (lower is better) Translates to: VLTLAVCMGTCA*HNSSVEARGQE Trigger: CTCTTGTCCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATACACACAGCAAGTGTCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | TGTGTATGGGGACATGTGCTTGCCACAATTCAAGTGTaGAAGCCAGAGGACAAGAGTAGAGTCAGCTCTTTC | + |
Preference number: 3 (lower is better) Translates to: CVWGHVLATIQV*KPEDKSRVSSF Trigger: GAAAGAGCTGACTCTACTCTTGTCCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR GCA 72 bp | GGATGGAAAGATAGTTCAGGGGTTAGGAATACTTGGTaGTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCAC | + |
Preference number: 3 (lower is better) Translates to: GWKDSSGVRNTW*SFKMLRLSSQH Trigger: GTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAAGTATTCCTAACCCCTGAACTATCTTTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | TATAACTCTGATTCCAAGGGATCCAACAGCCTCTTCTaGCCTCTGAAGACTCCAGGCATGCACTACATACAT | + |
Preference number: 3 (lower is better) Translates to: YNSDSKGSNSLF*PLKTPGMHYIH Trigger: ATGTATGTAGTGCATGCCTGGAGTCTTCAGAGGCCAGAAGAGGCTGTTGGATCCCTTGGAATCAGAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR TCA 72 bp | GAAAACAAAACAAAGTCCTCAGATCTGGCATCTCACTaGGTGCTGACTGGGAAATACAGGCCCTCAAGATGT | + |
Preference number: 3 (lower is better) Translates to: ENKTKSSDLASH*VLTGKYRPSRC Trigger: ACATCTTGAGGGCCTGTATTTCCCAGTCAGCACTCAGTGAGATGCCAGATCTGAGGACTTTGTTTTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | CAGAGGACAAGAGTAGAGTCAGCTCTTTCCACTATTTaGGTAACAGGGATAGAACTCAGATTGTTGGGCTTG | + |
Preference number: 3 (lower is better) Translates to: QRTRVESALSTI*VTGIELRLLGL Trigger: CAAGCCCAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGAAAGAGCTGACTCTACTCTTGTCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | GGTGGTTGTGAGTTGTGTGACATTTATAAAGTAGTCTaGAGATGGAGAGATGGCTCAGCAGTTAAGAGCACT | + |
Preference number: 3 (lower is better) Translates to: GGCELCDIYKVV*RWRDGSAVKST Trigger: AGTGCTCTTAACTGCTGAGCCATCTCTCCATCTCCAGACTACTTTATAAATGTCACACAACTCACAACCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR TCA 72 bp | ATTCCAGGGCTTCTGATTCTGGTCTCCATGGGCATATaGTACACATGCATCCATGCTGGCAAAATATTCATA | + |
Preference number: 3 (lower is better) Translates to: IPGLLILVSMGI*YTCIHAGKIFI Trigger: TATGAATATTTTGCCAGCATGGATGCATGTGTATCATATGCCCATGGAGACCAGAATCAGAAGCCCTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | TTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTaGCAGTTTACAAATATCTATAACTCTGATTCCAAG | + |
Preference number: 3 (lower is better) Translates to: FQNAQAQFPAPT*QFTNIYNSDSK Trigger: CTTGGAATCAGAGTTATAGATATTTGTAAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CCA 72 bp | AATGTTCCTTACTTAACTCTAATGCTAAACATAGTGTaGACTATGATCAGACCCTCTCCTCCCTATCTACCA | + |
Preference number: 3 (lower is better) Translates to: NVPYLTLMLNIV*TMIRPSPPYLP Trigger: TGGTAGATAGGGAGGAGAGGGTCTGATCATAGTCCACACTATGTTTAGCATTAGAGTTAAGTAAGGAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR GCA 72 bp | TCTGGTCTCCATGGGCATATGATACACATGCATCCATaGTGGCAAAATATTCATATCCATAAGATAAATCTA | + |
Preference number: 3 (lower is better) Translates to: SGLHGHMIHMHP*WQNIHIHKINL Trigger: TAGATTTATCTTATGGATATGAATATTTTGCCAGCATGGATGCATGTGTATCATATGCCCATGGAGACCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | TGGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGCAGCAACTCCTCATGTaGCCACTGGTGGTCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: WPSSLSLCPLRSQYTPPGQQLLM*PLVVFL Trigger: CAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTG...CCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGGGCTGCTTTTTCTTTCTaGGCAAGTCGGATCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GPPVFLCVLFGPNIHLQGAAFSF*ASRICC Trigger: GCAGCAGATCCGACTTGCCCAGAAAGAAAAAGCAGC...CCCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR GCA 90 bp | TGGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGACCAAGATCCATCCTTaGTACTCTCTGGCACAAGGG | + |
Preference number: 4 (lower is better) Translates to: WPSSLSLCPLRSQYTPPGTKIHP*YSLAQG Trigger: CCCTTGTGCCAGAGAGTAGCAAGGATGGATCTTGGT...CCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR GCA 90 bp | TGCTGTGTGTATGGGGACATGTGCTTGCCACAATTCAAGTGTGGAAGCCAGAGGCGCTTCTTGAGGTGGTaGTTCGTAGTCAGCCCTTCG | + |
Preference number: 4 (lower is better) Translates to: CCVYGDMCLPQFKCGSQRRFLRW*FVVSPS Trigger: CGAAGGGCTGACTACGAAGCACCACCTCAAGAAGCG...CCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATACACACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GTATGGGGACATGTGCTTGCCACAATTCAAGTGTGGAAGCCAGAGGACAAGAGTAGATGTGGGATCCTGTaGGATCCAGGCCCAACCTGG | + |
Preference number: 4 (lower is better) Translates to: VWGHVLATIQVWKPEDKSRCGIL*DPGPTW Trigger: CCAGGTTGGGCCTGGATCCCACAGGATCCCACATCT...ACTCTTGTCCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR TCA 90 bp | GCAGGGATTTTAGCTCTTATCTTCAAGATCCTCCATAGCTACGTCCTGGGGAGCAGGGGGTTGGCCAACTaGGGACTTTCTGGATGCCAT | + |
Preference number: 4 (lower is better) Translates to: AGILALIFKILHSYVLGSRGLAN*GLSGCH Trigger: ATGGCATCCAGAAAGTCCTCAGTTGGCCAACCCCCT...GCTCCCCAGGACGTAGCTATGGAGGATCTTGAAGATAAGAGCTAAAATCCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR TCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTAAGGCATCTTGTTCTTaGCCCCAGCCAAGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFKASCS*PQPSPG Trigger: CCCTGGACTTGGCTGGGGTCAAGAACAAGATGCCTT...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GCAGGCAGATTTCTGAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGGACACTTTCTGGATGCCATaGAGAGTCTGGGTTATCTCC | + |
Preference number: 4 (lower is better) Translates to: AGRFLKFEASLVYREFQDTFWMP*RVWVIS Trigger: GGAGATAACCCAGACTCTCCATGGCATCCAGAAAGT...GTCCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | AGCCTCTTCTGGCCTCTGAAGACTCCAGGCATGCACTACATACATAGTGTACACGATGCAGGACCCTGTTaGGTCCCAAAGAGGACAGAG | + |
Preference number: 4 (lower is better) Translates to: SLFWPLKTPGMHYIHSVHDAGPC*VPKRTE Trigger: CTCTGTCCTCTTTGGGACCCAACAGGGTCCTGCATC...GTGTACACTATGTATGTAGTGCATGCCTGGAGTCTTCAGAGGCCAGAAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GTATGGGGACATGTGCTTGCCACAATTCAAGTGTGGAAGCCAGAGGACAAGAGTTCATGTGGCCACTGGTaGTCTTCCTGGTCTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: VWGHVLATIQVWKPEDKSSCGHW*SSWSSS Trigger: TGAGGAAGACCAGGAAGACCACCAGTGGCCACATGA...ACTCTTGTCCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GCAGGGATTTTAGCTCTTATCTTCAAGATCCTCCATAGCTACGTCCTGGGGAGCGATCCAGGCCCAACCTaGCTCTTCACTTTGATCCTG | + |
Preference number: 4 (lower is better) Translates to: AGILALIFKILHSYVLGSDPGPT*LFTLIL Trigger: CAGGATCAAAGTGAAGAGCCAGGTTGGGCCTGGATC...GCTCCCCAGGACGTAGCTATGGAGGATCTTGAAGATAAGAGCTAAAATCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR TCA 90 bp | GGGGAGGGCACTGAAGAAGCTAACCAGTTTCATTTTGAGATAGGGTCTTACAGCTTCCTCACTCCCCTCTaGGGCCTCTACCACAATAGA | + |
Preference number: 4 (lower is better) Translates to: GEGTEEANQFHFEIGSYSFLTPL*GLYHNR Trigger: TCTATTGTGGTAGAGGCCTCAGAGGGGAGTGAGGAA...GCTGTAAGACCCTATCTCAAAATGAAACTGGTTAGCTTCTTCAGTGCCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR TCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTATACCCTGCGGCGCTTaGACAACTTCTTCTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFIPCGA*TTSSSA Trigger: AGCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTAT...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTCAACTGAGGACTTTCTaGATGCCATGGAGAGTCTGG | + |
Preference number: 4 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFQLRTF*MPWRVW Trigger: CCAGACTCTCCATGGCATCCAGAAAGTCCTCAGTTG...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGGAAAAGTACTGAGAGGTaGGAAATGGGGATATTCCAT | + |
Preference number: 4 (lower is better) Translates to: GPPVFLCVLFGPNIHLQGKSTER*EMGIFH Trigger: ATGGAATATCCCCATTTCCCACCTCTCAGTACTTTT...CCCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | ATGTGTCCTTCTTCTGAAGTGTCTCCACCCACACGCAAAGGCCTTTCTACATGGTTCTTAAAGGAGATGTaGGATCCTGTGGGATCCAGG | + |
Preference number: 4 (lower is better) Translates to: MCPSSEVSPPTRKGLSTWFLKEM*DPVGSR Trigger: CCTGGATCCCACAGGATCCCACATCTCCTTTAAGAA...CCATGTAGAAAGGCCTTTGCGTGTGGGTGGAGACACTTCAGAAGAAGGACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | GCAGGGATTTTAGCTCTTATCTTCAAGATCCTCCATAGCTACGTCCTGGGGAGCAAAGAGGACAGAGATTaGGAGTTTCCTGACCCTCTG | + |
Preference number: 4 (lower is better) Translates to: AGILALIFKILHSYVLGSKEDRD*EFPDPL Trigger: CAGAGGGTCAGGAAACTCCCAATCTCTGTCCTCTTT...GCTCCCCAGGACGTAGCTATGGAGGATCTTGAAGATAAGAGCTAAAATCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CAA 72 bp | TCCACTATTTGGGTAACAGGGATAGAACTCAGATTGTaGGGCTTGGGCCAAGTACCCTTACCCCTGAGTTAC | + |
Preference number: 4 (lower is better) Translates to: STIWVTGIELRL*GLGQVPLPLSY Trigger: GTAACTCAGGGGTAAGGGTACTTGGCCCAAGCCCAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | CTATCTACCACCCTTAATCGTCTGTATGTTCCAGAAATGCAGAATTGGAAGTGTGCCCGCTTCTTGAGGTaGTGCTTCGTAGTCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: LSTTLNRLYVPEMQNWKCARFLR*CFVVSP Trigger: AGGGCTGACTACGAAGCACCACCTCAAGAAGCGGGC...ACACTTCCAATTCTGCATTTCTGGAACATACAGACGATTAAGGGTGGTAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | CTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTACAAATATGCCATGGAGAGTCTaGGTTATCTCCAGACCAAGA | + |
Preference number: 4 (lower is better) Translates to: LFQNAQAQFPAPTWQFTNMPWRV*VISRPR Trigger: TCTTGGTCTGGAGATAACCCAGACTCTCCATGGCAT...ATTTGTAAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | CTATCTACCACCCTTAATCGTCTGTATGTTCCAGAAATGCAGAATTGGAAGTGTCACTGGTGGTCTTCCTaGTCTTCCTCACTCCCCTCT | + |
Preference number: 4 (lower is better) Translates to: LSTTLNRLYVPEMQNWKCHWWSS*SSSLPS Trigger: AGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTG...ACACTTCCAATTCTGCATTTCTGGAACATACAGACGATTAAGGGTGGTAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CCA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTCTGAGAGGTGGGAAATaGGGATATTCCATAAATCGT | + |
Preference number: 4 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFLRGGK*GYSINR Trigger: ACGATTTATGGAATATCCCCATTTCCCACCTCTCAG...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CAA 72 bp | TGTTTTGACACTTGCTGTGTGTATGGGGACATGTGCTaGCCACAATTCAAGTGTGGAAGCCAGAGGACAAGA | + |
Preference number: 4 (lower is better) Translates to: CFDTCCVYGDMC*PQFKCGSQRTR Trigger: TCTTGTCCTCTGGCTTCCACACTTGAATTGTGGCAAGCACATGTCCCCATACACACAGCAAGTGTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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3UTR CAA 72 bp | CCAGAGGACAAGAGTAGAGTCAGCTCTTTCCACTATTaGGGTAACAGGGATAGAACTCAGATTGTTGGGCTT | + |
Preference number: 4 (lower is better) Translates to: PEDKSRVSSFHY*GNRDRTQIVGL Trigger: AAGCCCAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGAAAGAGCTGACTCTACTCTTGTCCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR GCA 90 bp | ACCACCCTTAATCGTCTGTATGTTCCAGAAATGCAGAATTGGAAGTGTTTAGAAATCGTGTTCTATAGATaGAGGACCCTGTTGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: TTLNRLYVPEMQNWKCLEIVFYR*RTLLGP Trigger: GGGACCCAACAGGGTCCTGCATCTATAGAACACGAT...TTCTAAACACTTCCAATTCTGCATTTCTGGAACATACAGACGATTAAGGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 90 bp | TCAGTGAGCACCAGCAACTCCTCATGTGGCCACTGGTGGTCTTCCTaGTCTTCCTCACTCCCCTCTGAGGCCTCTACCACAATAGAGGGC | + |
Preference number: 5 (lower is better) Translates to: SVSTSNSSCGHWWSS*SSSLPSEASTTIEG Trigger: GCCCTCTATTGTGGTAGAGGCCTCAGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGTGCTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | TGGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGCTGGACGCCCGCTTCTaGAGGTGGTGCTTCGTAGTC | + |
Preference number: 5 (lower is better) Translates to: WPSSLSLCPLRSQYTPPGLDARF*RWCFVV Trigger: GACTACGAAGCACCACCTCAAGAAGCGGGCGTCCAG...CCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 90 bp | CCTGGCGTTTCCGTCGCCGATCCCTGCTTAATACCCTGCGGCGCTTaGACAACTTCTTCTTCAGCTCCCCCAAAAGTACTGAGAGGTGGG | + |
Preference number: 5 (lower is better) Translates to: PGVSVADPCLIPCGA*TTSSSAPPKVLRGG Trigger: CCCACCTCTCAGTACTTTTGGGGGAGCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTATTAAGCAGGGATCGGCGACGGAAACGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 90 bp | TCTTCACCATCAGTGAGCACCAGCAACTCCTCATGTGGCCACTGGTaGTCTTCCTGGTCTTCCTCACTCCCCTCTGAGGCCTCTACCACA | + |
Preference number: 5 (lower is better) Translates to: SSPSVSTSNSSCGHW*SSWSSSLPSEASTT Trigger: TGTGGTAGAGGCCTCAGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGTGCTCACTGATGGTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 90 bp | TCTTCTTCACCATCAGTGAGCACCAGCAACTCCTCATGTGGCCACTaGTGGTCTTCCTGGTCTTCCTCACTCCCCTCTGAGGCCTCTACC | + |
Preference number: 5 (lower is better) Translates to: SSSPSVSTSNSSCGH*WSSWSSSLPSEAST Trigger: GGTAGAGGCCTCAGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGTGCTCACTGATGGTGAAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | GCAGGCAGATTTCTGAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGGACCTAGTCCTGGTTGACTaGGAGGGGGCTTCCACTTCC | + |
Preference number: 5 (lower is better) Translates to: AGRFLKFEASLVYREFQDLVLVD*EGASTS Trigger: GGAAGTGGAAGCCCCCTCCAAGTCAACCAGGACTAG...GTCCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 90 bp | GATGTGGGATCCTGTGGGATCCAGGCCCAACCTGGCTCTTCACTTTaGTCCTGGAAGAAAGCTTCTGCGTCTTCTTCACCATCAGTGAGC | + |
Preference number: 5 (lower is better) Translates to: DVGSCGIQAQPGSSL*SWKKASASSSPSVS Trigger: GCTCACTGATGGTGAAGAAGACGCAGAAGCTTTCTTCCAGGATCAAAGTGAAGAGCCAGGTTGGGCCTGGATCCCACAGGATCCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 90 bp | AAGGGGGTTGGCCAACTGAGGACTTTCTGGATGCCATGGAGAGTCTaGGTTATCTCCAGACCAAGATCCATCCTTGCTACTCTCTGGCAC | + |
Preference number: 5 (lower is better) Translates to: KGVGQLRTFWMPWRV*VISRPRSILATLWH Trigger: GTGCCAGAGAGTAGCAAGGATGGATCTTGGTCTGGAGATAACCCAGACTCTCCATGGCATCCAGAAAGTCCTCAGTTGGCCAACCCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 90 bp | CACTTTGATCCTGGAAGAAAGCTTCTGCGTCTTCTTCACCATCAGTaGGCACCAGCAACTCCTCATGTGGCCACTGGTGGTCTTCCTGGT | + |
Preference number: 5 (lower is better) Translates to: HFDPGRKLLRLLHHQ*APATPHVATGGLPG Trigger: ACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGTGCTCACTGATGGTGAAGAAGACGCAGAAGCTTTCTTCCAGGATCAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 90 bp | CTTGACCCCAGCCAAGTCCAGGGTTTATTGTTCTTAAAGGAGATGTaGGATCCTGTGGGATCCAGGCCCAACCTGGCTCTTCACTTTGAT | + |
Preference number: 5 (lower is better) Translates to: LDPSQVQGLLFLKEM*DPVGSRPNLALHFD Trigger: ATCAAAGTGAAGAGCCAGGTTGGGCCTGGATCCCACAGGATCCCACATCTCCTTTAAGAACAATAAACCCTGGACTTGGCTGGGGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | GCAGGCAGATTTCTGAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGGACTCTCTTCTCTGTTTTTaGAAAGGGGGTTGGCCAACT | + |
Preference number: 5 (lower is better) Translates to: AGRFLKFEASLVYREFQDSLLCF*KGGWPT Trigger: AGTTGGCCAACCCCCTTTCAAAAAACAGAGAAGAGA...GTCCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTCAGAAATCTGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | GGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGGCAAGTCCAGGGTTTATaGTTCTTAAAGGAGATGTGG | + |
Preference number: 5 (lower is better) Translates to: GPPVFLCVLFGPNIHLQGQVQGL*FLKEMW Trigger: CCACATCTCCTTTAAGAACAATAAACCCTGGACTTG...CCCCTGGAGGTGTATATTGGGACCGAAGAGGACACAGAGAAAGACTGGAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | TTGGTGCTCTTTCAAAATGCTCAGGCTCAGTTCCCAGCACCTACGTGGCAGTTTAATACCCTGCGGCGCTaGAACAACTTCTTCTTCAGC | + |
Preference number: 5 (lower is better) Translates to: LVLFQNAQAQFPAPTWQFNTLRR*NNFFFS Trigger: GCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTATT...AAACTGCCACGTAGGTGCTGGGAACTGAGCCTGAGCATTTTGAAAGAGCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS-3UTR CAA 90 bp | GTAGAGTCAGCTCTTTCCACTATTTGGGTAACAGGGATAGAACTCAGATTGTTGAGATGCAGGACCCTGTaGGGTCCCAAAGAGGACAGA | + |
Preference number: 5 (lower is better) Translates to: VESALSTIWVTGIELRLLRCRTL*GPKEDR Trigger: TCTGTCCTCTTTGGGACCCAACAGGGTCCTGCATCT...CAACAATCTGAGTTCTATCCCTGTTACCCAAATAGTGGAAAGAGCTGACTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 72 bp | CCACTGGTGGTCTTCCTGGTCTTCCTCACTCCCCTCTaGGGCCTCTACCACAATAGAGGGCAGGCGGGGCTT | + |
Preference number: 6 (lower is better) Translates to: PLVVFLVFLTPL*GLYHNRGQAGL Trigger: AAGCCCCGCCTGCCCTCTATTGTGGTAGAGGCCTCAGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 72 bp | ACCAGCAACTCCTCATGTGGCCACTGGTGGTCTTCCTaGTCTTCCTCACTCCCCTCTGAGGCCTCTACCACA | + |
Preference number: 6 (lower is better) Translates to: TSNSSCGHWWSS*SSSLPSEASTT Trigger: TGTGGTAGAGGCCTCAGAGGGGAGTGAGGAAGACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CAA 90 bp | ACCTGGCGTTTCCGTCGCCGATCCCTGCTTAATACCCTGCGGCGCTaGAACAACTTCTTCTTCAGCTCCCCCAAAAGTACTGAGAGGTGG | + |
Preference number: 6 (lower is better) Translates to: TWRFRRRSLLNTLRR*NNFFFSSPKSTERW Trigger: CCACCTCTCAGTACTTTTGGGGGAGCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTATTAAGCAGGGATCGGCGACGGAAACGCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 72 bp | TTCTTCACCATCAGTGAGCACCAGCAACTCCTCATGTaGCCACTGGTGGTCTTCCTGGTCTTCCTCACTCCC | + |
Preference number: 6 (lower is better) Translates to: FFTISEHQQLLM*PLVVFLVFLTP Trigger: GGGAGTGAGGAAGACCAGGAAGACCACCAGTGGCCACATGAGGAGTTGCTGGTGCTCACTGATGGTGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 72 bp | TCCGTCGCCGATCCCTGCTTAATACCCTGCGGCGCTTaGACAACTTCTTCTTCAGCTCCCCCAAAAGTACTG | + |
Preference number: 6 (lower is better) Translates to: SVADPCLIPCGA*TTSSSAPPKVL Trigger: CAGTACTTTTGGGGGAGCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTATTAAGCAGGGATCGGCGACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CAA 72 bp | TTCCGTCGCCGATCCCTGCTTAATACCCTGCGGCGCTaGAACAACTTCTTCTTCAGCTCCCCCAAAAGTACT | + |
Preference number: 6 (lower is better) Translates to: FRRRSLLNTLRR*NNFFFSSPKST Trigger: AGTACTTTTGGGGGAGCTGAAGAAGAAGTTGTTCAAGCGCCGCAGGGTATTAAGCAGGGATCGGCGACGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 72 bp | GGCCAACTGAGGACTTTCTGGATGCCATGGAGAGTCTaGGTTATCTCCAGACCAAGATCCATCCTTGCTACT | + |
Preference number: 6 (lower is better) Translates to: GQLRTFWMPWRV*VISRPRSILAT Trigger: AGTAGCAAGGATGGATCTTGGTCTGGAGATAACCCAGACTCTCCATGGCATCCAGAAAGTCCTCAGTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CCA 72 bp | AGCCAAGTCCAGGGTTTATTGTTCTTAAAGGAGATGTaGGATCCTGTGGGATCCAGGCCCAACCTGGCTCTT | + |
Preference number: 6 (lower is better) Translates to: SQVQGLLFLKEM*DPVGSRPNLAL Trigger: AAGAGCCAGGTTGGGCCTGGATCCCACAGGATCCCACATCTCCTTTAAGAACAATAAACCCTGGACTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CAA 72 bp | CTGACCCTCTGTATCTTCAGGAATCCAGAAGGCATCTaGTTCTTGACCCCAGCCAAGTCCAGGGTTTATTGT | + |
Preference number: 6 (lower is better) Translates to: LTLCIFRNPEGI*FLTPAKSRVYC Trigger: ACAATAAACCCTGGACTTGGCTGGGGTCAAGAACAAGATGCCTTCTGGATTCCTGAAGATACAGAGGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS CAA 90 bp | CAACATCCTGATGATCTTCACATCTGCCAGTCTCTTCTCTGTTTTTaGAAAGGGGGTTGGCCAACTGAGGACTTTCTGGATGCCATGGAG | + |
Preference number: 6 (lower is better) Translates to: QHPDDLHICQSLLCF*KGGWPTEDFLDAME Trigger: CTCCATGGCATCCAGAAAGTCCTCAGTTGGCCAACCCCCTTTCAAAAAACAGAGAAGAGACTGGCAGATGTGAAGATCATCAGGATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |
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CDS TCA 72 bp | TCTGTATCTTCAGGAATCCAGAAGGCATCTTGTTCTTaGCCCCAGCCAAGTCCAGGGTTTATTGTTCTTAAA | + |
Preference number: 6 (lower is better) Translates to: SVSSGIQKASCS*PQPSPGFIVLK Trigger: TTTAAGAACAATAAACCCTGGACTTGGCTGGGGTCAAGAACAAGATGCCTTCTGGATTCCTGAAGATACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187504.7 |