Pregenerated sensors for LBH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024063Ensembl transcript IDs: ENSMUST00000024857.14, ENSMUST00000148556.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTCTTGGGAGATCCACCGTGGGAGGAGGCACTCCCTATTCAGGCTaGAGCCTTGGAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: ILGRSTVGGGTPYSG*SLGVPHKGRKCSGC Trigger: ACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAATAGGGAGTGCCTCCTCCCACGGTGGATCTCCCAAGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 90 bp | CAGATGAACAGTGACAGGCCACAGCATAGCTGGGGACCGTCCACCTaGCTGCTGTGGCCAAAGGAGAAAGGAAGGGCAGGCCTGAGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: QMNSDRPQHSWGPST*LLWPKEKGRAGLRK Trigger: CTTTCTCAGGCCTGCCCTTCCTTTCTCCTTTGGCCACAGCAGTCAGGTGGACGGTCCCCAGCTATGCTGTGGCCTGTCACTGTTCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 90 bp | GCCGTGATCTCACAACAGCTACTGTCTCAAACTGGATGCCACAGCTaGTCCACTGGAGGGCTGATTCCCACATGGGAATCAATGCGGCAC | + |
|
Preference number: 1 (lower is better) Translates to: AVISQQLLSQTGCHS*STGGLIPTWESMRH Trigger: GTGCCGCATTGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 90 bp | TGGGGAATGGTGGTGGAGTCTTCCTTTCCTCTGTATCCCTCCATCTaGCTTCCTAGGCAGTTTACCTGGCCCGACTTCTCTGTGGGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: WGMVVESSFPLYPSI*LPRQFTWPDFSVGD Trigger: GTCACCCACAGAGAAGTCGGGCCAGGTAAACTGCCTAGGAAGCCAGATGGAGGGATACAGAGGAAAGGAAGACTCCACCACCATTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 90 bp | TATGGAGGGCAGGCGGTCCTTCAGCTTGCAGCAACGGTCAAAGTCTaGTGGGTCCGGAAAGATCTGTTTTGCTGTACTCGGAGGGCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: YGGQAVLQLAATVKV*WVRKDLFCCTRRAE Trigger: TTCTGCCCTCCGAGTACAGCAAAACAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR GCA 90 bp | CTTCAGTGGGTTCCACCACTATGGAGGGCAGGCGGTCCTTCAGCTTaGAGCAACGGTCAAAGTCTGATGGGTCCGGAAAGATCTGTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: LQWVPPLWRAGGPSA*SNGQSLMGPERSVL Trigger: CAAAACAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR GCA 90 bp | AGAGGAGAAGCCGTGATCTCACAACAGCTACTGTCTCAAACTGGATaGCACAGCTGCTCCACTGGAGGGCTGATTCCCACATGGGAATCA | + |
|
Preference number: 1 (lower is better) Translates to: RGEAVISQQLLSQTG*HSCSTGGLIPTWES Trigger: TGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGCTTCTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 90 bp | AACAAGAGGAGAAGCCGTGATCTCACAACAGCTACTGTCTCAAACTaGATGCCACAGCTGCTCCACTGGAGGGCTGATTCCCACATGGGA | + |
|
Preference number: 1 (lower is better) Translates to: NKRRSRDLTTATVSN*MPQLLHWRADSHMG Trigger: TCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGCTTCTCCTCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 90 bp | TATCTTCTCCCAACCTGTGCTCAGGAGCAACAAGAGGAGAAGCCGTaGTCTCACAACAGCTACTGTCTCAAACTGGATGCCACAGCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: YLLPTCAQEQQEEKP*SHNSYCLKLDATAA Trigger: AGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGGGAGAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 90 bp | TTCTACAAGGATACTCCAGCACACCCTGTATCTTCTCCCAACCTGTaGTCAGGAGCAACAAGAGGAGAAGCCGTGATCTCACAACAGCTA | + |
|
Preference number: 1 (lower is better) Translates to: FYKDTPAHPVSSPNL*SGATRGEAVISQQL Trigger: TAGCTGTTGTGAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGGGAGAAGATACAGGGTGTGCTGGAGTATCCTTGTAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 90 bp | TTAATTTCCCCATGCAACTGCTGCCCTTTCCAGAGACAGGTAAAGTaGGGAAGGAATAAAGGCTGCTATTCTACAAGGATACTCCAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: LISPCNCCPFQRQVK*GRNKGCYSTRILQH Trigger: GTGCTGGAGTATCCTTGTAGAATAGCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTGGAAAGGGCAGCAGTTGCATGGGGAAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAGGAGGCCAGACAGGAGCTCAGTAGCGGTCAGCCCCTaGCCTGCTCAGACAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: EEEEEEEEEEKRRPDRSSVAVSP*PAQTAH Trigger: ATGTGCTGTCTGAGCAGGTCAGGGGCTGACCGCTAC...TGAGCTCCTGTCTGGCCTCCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR TCA 90 bp | AGACGGGGGTCAACCTGGACTGACAAGAGACGTGAGGGGACATTTGTGAGTGCCGGTCCCTGGGGACTCTaGCAGCCTGAAGCATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRGSTWTDKRREGTFVSAGPWGL*QPEASG Trigger: CCCAGATGCTTCAGGCTGTCAGAGTCCCCAGGGACC...GGCACTCACAAATGTCCCCTCACGTCTCTTGTCAGTCCAGGTTGACCCCCGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | GTGACAGGCCACAGCATAGCTGGGGACCGTCCACCTGACTGCTGTGGCCAAAGGTTCCTTTCTCAGCCTTaGAAGTTGTCAGAGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VTGHSIAGDRPPDCCGQRFLSQP*KLSEGS Trigger: GGAGCCCTCTGACAACTTGCAAGGCTGAGAAAGGAA...CCTTTGGCCACAGCAGTCAGGTGGACGGTCCCCAGCTATGCTGTGGCCTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGCTCCACTGGAGGGCTGATTCCCACATGGGAATCAATGCGGCACCACCCACTGTATCCCTCCATCTaGCTTCCTAGGCAGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: SCSTGGLIPTWESMRHHPLYPSI*LPRQFT Trigger: GGTAAACTGCCTAGGAAGCCAGATGGAGGGATACAG...TGGGTGGTGCCGCATTGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAGGAGGCCAGACAGGAGCTCACAGAGACAGGTAAAGTaGGGAAGGAATAAAGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: EEEEEEEEEEKRRPDRSSQRQVK*GRNKGC Trigger: GCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTG...TGAGCTCCTGTCTGGCCTCCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CAA 90 bp | CCTTCAGTGGGTTCCACCACTATGGAGGGCAGGCGGTCCTTCAGCTaGCAGCAACGGTCAAAGTCTGATGGGTCCGGAAAGATCTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSVGSTTMEGRRSFS*QQRSKSDGSGKICF Trigger: AAAACAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGCACATGGTTGTTCAACACAGTCTAGTGACCAGCAAAAGGAAGAAGCCATGGGGACCGTCCACCTaGCTGCTGTGGCCAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RQHMVVQHSLVTSKRKKPWGPST*LLWPKE Trigger: CTCCTTTGGCCACAGCAGTCAGGTGGACGGTCCCCA...TGGCTTCTTCCTTTTGCTGGTCACTAGACTGTGTTGAACAACCATGTGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | CTATGGAGGGCAGGCGGTCCTTCAGCTTGCAGCAACGGTCAAAGTCTGATGGGTGGAGGGCAGAAGAAATaGTTATCCCACCGAACATCT | + |
|
Preference number: 2 (lower is better) Translates to: LWRAGGPSACSNGQSLMGGGQKK*LSHRTS Trigger: AGATGTTCGGTGGGATAAGCATTTCTTCTGCCCTCC...ACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCCCTTATATACTGGGAGTCTGGGGAATGGTGGTaGAGTCTTCCTTTCCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ECLTRAGSALAVPLIYWESGEWW*SLPFLC Trigger: ACAGAGGAAAGGAAGACTCCACCACCATTCCCCAGA...CTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGCTCCACTGGAGGGCTGATTCCCACATGGGAATCAATGCGGCACCACCCACTTCTTCCATCACCATaGGAAAAACAGTTCAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SCSTGGLIPTWESMRHHPLLPSP*EKQFRC Trigger: ACACCTGAACTGTTTTTCCCATGGTGATGGAAGAAG...TGGGTGGTGCCGCATTGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACTGCTGCCCTTTCCAGAGACAGGTAAAGTGGGGAAGGAATAAAGGCTGCGCTACTGTCTCAAACTaGATGCCACAGCTGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CNCCPFQRQVKWGRNKGCATVSN*MPQLLH Trigger: GTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGC...GCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTGGAAAGGGCAGCAGTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | CAATACAGAACAGACAGAAGTCACAGGAGGTTCATCTCACAACAGGCATGTCACCTCTGGTTGCAGGGTTaGCTGCAGCCCTCTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: QYRTDRSHRRFISQQACHLWLQG*LQPSPT Trigger: AGTGGGAGAGGGCTGCAGCCAACCCTGCAACCAGAG...GTGACATGCCTGTTGTGAGATGAACCTCCTGTGACTTCTGTCTGTTCTGTATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CAA 90 bp | AAACAAAGGCTGGTGGCTGTGAGCAACAGAGCAGGAGATAAGGACTaGGTTGTCAGATGCCCCAGTAGCCAGGACAAATGCTGGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KQRLVAVSNRAGDKD*VVRCPSSQDKCWKE Trigger: CTCTTTCCAGCATTTGTCCTGGCTACTGGGGCATCTGACAACCAAGTCCTTATCTCCTGCTCTGTTGCTCACAGCCACCAGCCTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGCACATGGTTGTTCAACACAGTCTAGTGACCAGCAAAAGGAAGAAGCCACTGCTGCAGGTCAGATaGACAGTGACAGGCCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RQHMVVQHSLVTSKRKKPLLQVR*TVTGHS Trigger: GCTGTGGCCTGTCACTGTTCATCTGACCTGCAGCAG...TGGCTTCTTCCTTTTGCTGGTCACTAGACTGTGTTGAACAACCATGTGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR TCA 90 bp | AACCAGACAAACGAGTCCAAAGACGGGGGTCAACCTGGACTGACAAGAGACGTGTTTAAGTCCACCTCTTaGCCAAACAGCCCTGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: NQTNESKDGGQPGLTRDVFKSTS*PNSPAL Trigger: TAGAGCAGGGCTGTTTGGTCAAGAGGTGGACTTAAA...CACGTCTCTTGTCAGTCCAGGTTGACCCCCGTCTTTGGACTCGTTTGTCTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | AGCTGCTCCACTGGAGGGCTGATTCCCACATGGGAATCAATGCGGCACCACCCAGTCAGAGGGCTCCATTaGTCAACGAATTTAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SCSTGGLIPTWESMRHHPVRGLH*STNLKT Trigger: TGTTTTTAAATTCGTTGAGCAATGGAGCCCTCTGAC...TGGGTGGTGCCGCATTGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCCCTTATATACTGGGAGAACGGAAGCCTCGTTTaGCATTTTCACAATGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: ECLTRAGSALAVPLIYWENGSLV*HFHNDC Trigger: ACAGTCATTGTGAAAATGTCAAACGAGGCTTCCGTT...CTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGGATACTCCAGCACACCCTGTATCTTCTCCCAACCTGTGCTCAGGAGCAAGTAGCCAGGACAAATaGTGGAAAGAGCAGCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: YKDTPAHPVSSPNLCSGASSQDK*WKEQHF Trigger: GAAGTGCTGCTCTTTCCAGCATTTGTCCTGGCTACT...TGCTCCTGAGCACAGGTTGGGAGAAGATACAGGGTGTGCTGGAGTATCCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACTGCTGCCCTTTCCAGAGACAGGTAAAGTGGGGAAGGAATAAAGGCTGCTCGGTGATTTTCAGGTaGAAAACGGAAGCCTCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CNCCPFQRQVKWGRNKGCSVIFR*KTEASF Trigger: AAACGAGGCTTCCGTTTTGCACCTGAAAATCACCGA...GCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTGGAAAGGGCAGCAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR GCA 90 bp | CAATACAGAACAGACAGAAGTCACAGGAGGTTCATCTCACAACAGGCATGTCACATTTCCCCATGCAACTaGTGCCCTTTCCAGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: QYRTDRSHRRFISQQACHISPCN*CPFQRQ Trigger: CTGTCTCTGGAAAGGGCAGCAGTTGCATGGGGAAAT...GTGACATGCCTGTTGTGAGATGAACCTCCTGTGACTTCTGTCTGTTCTGTATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGGGGAAGGAATAAAGGCTGCTATTCTACAAGGATACTCCAGCACACCCTGGTTCCCCTTATATACTaGGAGGCAGAAGGGGGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KWGRNKGCYSTRILQHTLVPLIY*EAEGGK Trigger: TTTACCCCCTTCTGCCTCCCAGTATATAAGGGGAAC...CAGGGTGTGCTGGAGTATCCTTGTAGAATAGCAGCCTTTATTCCTTCCCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | CGTGGGAGGAGGCACTCCCTATTCAGGCTGCAGCCTTaGAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGRRHSLFRLQP*SASQGQEVLWL Trigger: CAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAATAGGGAGTGCCTCCTCCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | TGCCACAGCTGCTCCACTGGAGGGCTGATTCCCACATaGGAATCAATGCGGCACCACCCAGGCCCCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: CHSCSTGGLIPT*ESMRHHPGPCM Trigger: CATGCAGGGGCCTGGGTGGTGCCGCATTGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | GGCTCAACCGCTGAGGGGCCTGTAGCGGTCAGCCCCTaGCCTGCTCAGACAGCACATGGTTGTTCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: GSTAEGPVAVSP*PAQTAHGCSTQ Trigger: CTGTGTTGAACAACCATGTGCTGTCTGAGCAGGTCAGGGGCTGACCGCTACAGGCCCCTCAGCGGTTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | GAGGAGGCACTCCCTATTCAGGCTGCAGCCTTGGAGTaGCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EEALPIQAAALE*LTRAGSALAVP Trigger: GGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAATAGGGAGTGCCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | AGATCCACCGTGGGAGGAGGCACTCCCTATTCAGGCTaGAGCCTTGGAGTGCCTCACAAGGGCAGGAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSTVGGGTPYSG*SLGVPHKGRKC Trigger: GCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAATAGGGAGTGCCTCCTCCCACGGTGGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | GGGAAACCCATTGGAGTGGCCCTGCTGCAGGTCAGATaGACAGTGACAGGCCACAGCATAGCTGGGGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: GKPIGVALLQVR*TVTGHSIAGDR Trigger: ACGGTCCCCAGCTATGCTGTGGCCTGTCACTGTTCATCTGACCTGCAGCAGGGCCACTCCAATGGGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | GAAGCAAGAGAGAGAGAAGCTCTCTGGTTGCAGGGTTaGCTGCAGCCCTCTCCCACTTCTGCAAGGAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: EAREREALWLQG*LQPSPTSARSR Trigger: CCGGCTCCTTGCAGAAGTGGGAGAGGGCTGCAGCCAACCCTGCAACCAGAGAGCTTCTCTCTCTCTTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | AAGGCCAGACACCTGTCCATAAAGGGAGGCGAGGGATaGGAAACGCTGCGGGGGAACAGGAGTGGGATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KARHLSIKGGEG*ETLRGNRSGMN Trigger: GTTCATCCCACTCCTGTTCCCCCGCAGCGTTTCTCATCCCTCGCCTCCCTTTATGGACAGGTGTCTGGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | GGCTGCAGCCTTGGAGTGCCTCACAAGGGCAGGAAGTaGTCTGGCTGTTCCCCTTATATACTGGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GCSLGVPHKGRK*SGCSPYILGGR Trigger: TCTGCCTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | CAGCCTTGGAGTGCCTCACAAGGGCAGGAAGTGCTCTaGCTGTTCCCCTTATATACTGGGAGGCAGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPWSASQGQEVL*LFPLYTGRQKG Trigger: CCCCTTCTGCCTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATCTGGCTTCCTAGGCAGTTTACCTGGCCCGACTTCTCTGTGGGTGACCTTCCTTTCTCAGCCTaGCAAGTTGTCAGAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSIWLPRQFTWPDFSVGDLPFSA*QVVRGL Trigger: GAGCCCTCTGACAACTTGCAAGGCTGAGAAAGGAAG...GTCACCCACAGAGAAGTCGGGCCAGGTAAACTGCCTAGGAAGCCAGATGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAACCCATTGGAGTGGCCCTGCTGCAGGTCAGATGAACAGTGACAGGCCACAGTCTCAGCCTTGCAAGTaGTCAGAGGGCTCCATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ETHWSGPAAGQMNSDRPQSQPCK*SEGSIA Trigger: AGCAATGGAGCCCTCTGACAACTTGCAAGGCTGAGA...CTGTGGCCTGTCACTGTTCATCTGACCTGCAGCAGGGCCACTCCAATGGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | TTAAAGCCTCCCAGGTCCCTGGGGACTCTGACAGCCTaGAGCATCTGGGGAATGGTGGTGGAGTCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKPPRSLGTLTA*SIWGMVVESSF Trigger: AAAGGAAGACTCCACCACCATTCCCCAGATGCTTCAGGCTGTCAGAGTCCCCAGGGACCTGGGAGGCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | GCCGTGATCTCACAACAGCTACTGTCTCAAACTGGATaGCACAGCTGCTCCACTGGAGGGCTGATTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: AVISQQLLSQTG*HSCSTGGLIPT Trigger: TGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGGATACTCCAGCACACCCTGTATCTTCTCCCAACCTGTGCTCAGGAGCAATTCAGGCTGCAGCCTaGGAGTGCCTCACAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YKDTPAHPVSSPNLCSGAIQAAA*ECLTRA Trigger: TGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAAT...TGCTCCTGAGCACAGGTTGGGAGAAGATACAGGGTGTGCTGGAGTATCCTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | AGGGATGAGAAACGCTGCGGGGGAACAGGAGTGGGATaGACAGATCTCTGTAGCCAAAACAGAGCAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RDEKRCGGTGVG*TDLCSQNRAEW Trigger: CCACTCTGCTCTGTTTTGGCTACAGAGATCTGTTCATCCCACTCCTGTTCCCCCGCAGCGTTTCTCATCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | CAGGCGGTCCTTCAGCTTGCAGCAACGGTCAAAGTCTaGTGGGTCCGGAAAGATCTGTTTTGCTGTACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: QAVLQLAATVKV*WVRKDLFCCTR Trigger: CCGAGTACAGCAAAACAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR CCA 72 bp | CTGTATCCCTCCATCTGGCTTCCTAGGCAGTTTACCTaGCCCGACTTCTCTGTGGGTGACCAAACACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LYPSIWLPRQFT*PDFSVGDQTHL Trigger: CAAGTGTGTTTGGTCACCCACAGAGAAGTCGGGCCAGGTAAACTGCCTAGGAAGCCAGATGGAGGGATACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | GTGGTGGAGTCTTCCTTTCCTCTGTATCCCTCCATCTaGCTTCCTAGGCAGTTTACCTGGCCCGACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VVESSFPLYPSI*LPRQFTWPDFS Trigger: AGAGAAGTCGGGCCAGGTAAACTGCCTAGGAAGCCAGATGGAGGGATACAGAGGAAAGGAAGACTCCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | AGAAGCCGTGATCTCACAACAGCTACTGTCTCAAACTaGATGCCACAGCTGCTCCACTGGAGGGCTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSRDLTTATVSN*MPQLLHWRADS Trigger: GGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR TCA 72 bp | CCAACCTGTGCTCAGGAGCAACAAGAGGAGAAGCCGTaGTCTCACAACAGCTACTGTCTCAAACTGGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: PTCAQEQQEEKP*SHNSYCLKLDA Trigger: GGCATCCAGTTTGAGACAGTAGCTGTTGTGAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | GACTTGGTTGTCAGATGCCCCAGTAGCCAGGACAAATaGTGGAAAGAGCAGCACTTCCTGGCTGTAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLVVRCPSSQDK*WKEQHFLAVVL Trigger: GAGAACTACAGCCAGGAAGTGCTGCTCTTTCCAGCATTTGTCCTGGCTACTGGGGCATCTGACAACCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | TCACAACAGCTACTGTCTCAAACTGGATGCCACAGCTaGTCCACTGGAGGGCTGATTCCCACATGGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SQQLLSQTGCHS*STGGLIPTWES Trigger: TGATTCCCATGTGGGAATCAGCCCTCCAGTGGAGCAGCTGTGGCATCCAGTTTGAGACAGTAGCTGTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | GATACTCCAGCACACCCTGTATCTTCTCCCAACCTGTaGTCAGGAGCAACAAGAGGAGAAGCCGTGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DTPAHPVSSPNL*SGATRGEAVIS Trigger: TGAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGGGAGAAGATACAGGGTGTGCTGGAGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CCA 72 bp | GAACCAGACAAACGAGTCCAAAGACGGGGGTCAACCTaGACTGACAAGAGACGTGAGGGGACATTTGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EPDKRVQRRGST*TDKRREGTFVS Trigger: ACTCACAAATGTCCCCTCACGTCTCTTGTCAGTCCAGGTTGACCCCCGTCTTTGGACTCGTTTGTCTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | AGCAACAGAGCAGGAGATAAGGACTTGGTTGTCAGATaGCCCAGTAGCCAGGACAAATGCTGGAAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SNRAGDKDLVVR*PSSQDKCWKEQ Trigger: CTGCTCTTTCCAGCATTTGTCCTGGCTACTGGGGCATCTGACAACCAAGTCCTTATCTCCTGCTCTGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGGGGAAGGAATAAAGGCTGCTATTCTACAAGGATACTCCAGCACACCCTGATCTTTCTTGCTCATTaGCTCACCCCCTCAGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KWGRNKGCYSTRILQHTLIFLAH*LTPSAR Trigger: TCGGGCTGAGGGGGTGAGCAAATGAGCAAGAAAGAT...CAGGGTGTGCTGGAGTATCCTTGTAGAATAGCAGCCTTTATTCCTTCCCCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR GCA 72 bp | AAGATCTGTTTTGCTGTACTCGGAGGGCAGAAGAAATaGTTATCCCACCGAACATCTGAGGTCTCCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KICFAVLGGQKK*LSHRTSEVSQG Trigger: ACCCTGGGAGACCTCAGATGTTCGGTGGGATAAGCATTTCTTCTGCCCTCCGAGTACAGCAAAACAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| 3UTR GCA 72 bp | TTCCAGAGACAGGTAAAGTGGGGAAGGAATAAAGGCTaGTATTCTACAAGGATACTCCAGCACACCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FQRQVKWGRNKG*YSTRILQHTLY Trigger: ATACAGGGTGTGCTGGAGTATCCTTGTAGAATAGCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CAA 72 bp | CCGTGGGAGGAGGCACTCCCTATTCAGGCTGCAGCCTaGGAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWEEALPIQAAA*ECLTRAGSALA Trigger: AGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGCCTGAATAGGGAGTGCCTCCTCCCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAGGAGGCCAGACAGGAGCTCACATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EEEEEEEEEEKRRPDRSSHPCGG*DQSLPW Trigger: CCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATG...TGAGCTCCTGTCTGGCCTCCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCAGAAGAAATGCTTATCCCACCGAACATCTGAGGTCTCCCAGGGTGTCCCCGCGTGGGGCTTCTaGGAATCACGGGCCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGQKKCLSHRTSEVSQGVPAWGF*ESRASQ Trigger: TTGTGAGGCCCGTGATTCTCAGAAGCCCCACGCGGG...GACACCCTGGGAGACCTCAGATGTTCGGTGGGATAAGCATTTCTTCTGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS-3UTR CCA 90 bp | AGACGGGGGTCAACCTGGACTGACAAGAGACGTGAGGGGACATTTGTGAGTGCCTGGGTTCCACCACTATaGAGGGCAGGCGGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGSTWTDKRREGTFVSAWVPPL*RAGGPS Trigger: TGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCA...GGCACTCACAAATGTCCCCTCACGTCTCTTGTCAGTCCAGGTTGACCCCCGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CAA 72 bp | GGTTCCACCACTATGGAGGGCAGGCGGTCCTTCAGCTaGCAGCAACGGTCAAAGTCTGATGGGTCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSTTMEGRRSFS*QQRSKSDGSGK Trigger: CTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS-3UTR TCA 90 bp | GTACTCGGAGGGCAGAAGAAATGCTTATCCCACCGAACATCTGAGGTCTCCCAGCATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGGQKKCLSHRTSEVSQHPCGG*DQSLPW Trigger: CCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATG...CTGGGAGACCTCAGATGTTCGGTGGGATAAGCATTTCTTCTGCCCTCCGAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS-3UTR TCA 90 bp | GAAACCCATTGGAGTGGCCCTGCTGCAGGTCAGATGAACAGTGACAGGCCACAGGCAACGGTCAAAGTCTaGTGGGTCCGGAAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETHWSGPAAGQMNSDRPQATVKV*WVRKDL Trigger: CAGATCTTTCCGGACCCATCAGACTTTGACCGTTGC...CTGTGGCCTGTCACTGTTCATCTGACCTGCAGCAGGGCCACTCCAATGGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR GCA 90 bp | GCCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCCCTTATATACTGGGAGGCAGTCTTCACAGTTGTCTTaGTCATCCTCCTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQGQEVLWLFPLYTGRQSSQLS*SSSWTR Trigger: CCTGGTCCAGGAGGATGAGCAAGACAACTGTGAAGA...CTGCCTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCATCTGGGGAATGGTGGTGGAGTCTTCCTTTCCTCTGTATCCCTCCATCCACCTCCCCTTCAGTaGGTTCCACCACTATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHLGNGGGVFLSSVSLHPPPLQ*VPPLWR Trigger: CCTCCATAGTGGTGGAACCCACTGAAGGGGAGGTGG...ATGGAGGGATACAGAGGAAAGGAAGACTCCACCACCATTCCCCAGATGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| 3UTR CAA 72 bp | CTGGTGGCTGTGAGCAACAGAGCAGGAGATAAGGACTaGGTTGTCAGATGCCCCAGTAGCCAGGACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LVAVSNRAGDKD*VVRCPSSQDKC Trigger: GCATTTGTCCTGGCTACTGGGGCATCTGACAACCAAGTCCTTATCTCCTGCTCTGTTGCTCACAGCCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR GCA 90 bp | TGTATCTTCTCCCAACCTGTGCTCAGGAGCAACAAGAGGAGAAGCCGTGATCTCGGCGGTCCTTCAGCTTaGAGCAACGGTCAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CIFSQPVLRSNKRRSRDLGGPSA*SNGQSL Trigger: CAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCC...GAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGGGAGAAGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCAGAAGAAATGCTTATCCCACCGAACATCTGAGGTCTCCCAGGGTGTCGACCAATCTCTTCCATaGATGGAGCGTTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GGQKKCLSHRTSEVSQGVDQSLP*MERSSS Trigger: TGATGATGAACGCTCCATCCATGGAAGAGATTGGTC...GACACCCTGGGAGACCTCAGATGTTCGGTGGGATAAGCATTTCTTCTGCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS-3UTR CCA 90 bp | TGTATCTTCTCCCAACCTGTGCTCAGGAGCAACAAGAGGAGAAGCCGTGATCTCTCTTGCTCATCCTCCTaGACCAGGAATTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIFSQPVLRSNKRRSRDLSCSSS*TRNSSG Trigger: TCCTGAGGAATTCCTGGTCCAGGAGGATGAGCAAGA...GAGATCACGGCTTCTCCTCTTGTTGCTCCTGAGCACAGGTTGGGAGAAGATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CCA 90 bp | CGGAAAGATCTGTTTTGCTGTACTCGGAGGGCAGAAGAAATGCTTATCCCACCGAATCTCTTCCATGGATaGAGCGTTCATCATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKDLFCCTRRAEEMLIPPNLFHG*SVHHHL Trigger: GAGGTGATGATGAACGCTCCATCCATGGAAGAGATT...CGGTGGGATAAGCATTTCTTCTGCCCTCCGAGTACAGCAAAACAGATCTTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCTGCCCTTTCCAGAGACAGGTAAAGTGGGGAAGGAATAAAGGCTGCTATAATCTCTTCCATGGATaGAGCGTTCATCATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCCPFQRQVKWGRNKGCYNLFHG*SVHHHL Trigger: GAGGTGATGATGAACGCTCCATCCATGGAAGAGATT...ATAGCAGCCTTTATTCCTTCCCCACTTTACCTGTCTCTGGAAAGGGCAGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CCA 90 bp | TGGATTTACAAGCACATCCCATCACACGGCAAGACCAAGACAGATAACTGGGGTGACCAATCTCTTCCATaGATGGAGCGTTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WIYKHIPSHGKTKTDNWGDQSLP*MERSSS Trigger: TGATGATGAACGCTCCATCCATGGAAGAGATTGGTC...ACCCCAGTTATCTGTCTTGGTCTTGCCGTGTGATGGGATGTGCTTGTAAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS CCA 90 bp | GGAGCTCCCCGCTTTCCACCTCCCCTTCAGTGGGTTCCACCACTATaGAGGGCAGGCGGTCCTTCAGCTTGCAGCAACGGTCAAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPRFPPPLQWVPPL*RAGGPSACSNGQSL Trigger: CAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAGGGGAGGTGGAAAGCGGGGAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CAA 90 bp | CCCTCCATCTGGCTTCCTAGGCAGTTTACCTGGCCCGACTTCTCTGTGGGTGACCTCTTCACAGTTGTCTaGCTCATCCTCCTGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSIWLPRQFTWPDFSVGDLFTVV*LILLDQ Trigger: CTGGTCCAGGAGGATGAGCAAGACAACTGTGAAGAG...GTCACCCACAGAGAAGTCGGGCCAGGTAAACTGCCTAGGAAGCCAGATGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAGGAGGCCAGACAGGAGCTCAGTTGTCTCTTCACAGTaGTCTTGCTCATCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEEEEEEEEEKRRPDRSSVVSSQ*SCSSSW Trigger: CCAGGAGGATGAGCAAGACAACTGTGAAGAGACAAC...TGAGCTCCTGTCTGGCCTCCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS GCA 90 bp | CTTCAGTGGGTTCCACCACTATGGAGGGCAGGCGGTCCTTCAGCTTaGAGCAACGGTCAAAGTCTGATGGGTCCGGAAAGATCTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQWVPPLWRAGGPSA*SNGQSLMGPERSDR Trigger: CCTATCAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS TCA 90 bp | ATGGGTCCGGAAAGATCTGATAGGAAAGGCCATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGGATGGAGCGTTCATCATCACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MGPERSDRKGHPCGG*DQSLPWMERSSSPR Trigger: CCGAGGTGATGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATGGCCTTTCCTATCAGATCTTTCCGGACCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS TCA 90 bp | CAAATCGTCCCAATCCCTGATAGGAAAGGCCATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGGATGGAGCGTTCATCATCACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QIVPIPDRKGHPCGG*DQSLPWMERSSSPR Trigger: CCGAGGTGATGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATGGCCTTTCCTATCAGGGATTGGGACGATTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS CCA 90 bp | GGAAAGGCCATCCTTGCGGGGGCTGAGACCAATCTCTTCCATGGATaGAGCGTTCATCATCACCTCGGTCATCTCAGCCGATCTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: GKAILAGAETNLFHG*SVHHHLGHLSRSQI Trigger: TATCTGAGATCGGCTGAGATGACCGAGGTGATGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATGGCCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024857.14 ENSMUST00000148556.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGACAAACGAGTCCAAAGACGGGGGTCAACCTGGACTGACAAGAGACGTGAGGCGGTCCTTCAGCTaGCAGCAACGGTCAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQTNESKDGGQPGLTRDVRRSFS*QQRSKS Trigger: AGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCT...CACGTCTCTTGTCAGTCCAGGTTGACCCCCGTCTTTGGACTCGTTTGTCTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS CCA 90 bp | TTCTTTTCATTTGTTGTCTCTTCACAGTTGTCTTGCTCATCCTCCTaGACCAGGAATTCCTCAGGAGGCCACCGGAGCTCCCCGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FFSFVVSSQLSCSSS*TRNSSGGHRSSPLS Trigger: GGAAAGCGGGGAGCTCCGGTGGCCTCCTGAGGAATTCCTGGTCCAGGAGGATGAGCAAGACAACTGTGAAGAGACAACAAATGAAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGCCTTGGAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCCCTTGGTCCTTCTTTTCATTaGTTGTCTCTTCACAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAALECLTRAGSALAVPLGPSFH*LSLHSC Trigger: ACAACTGTGAAGAGACAACAAATGAAAAGAAGGACC...AAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTCCAAGGCTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS-3UTR CAA 90 bp | GAGTGCCTCACAAGGGCAGGAAGTGCTCTGGCTGTTCCCCTTATATACTGGGAGCCTTCTTTTCATTTGTaGTCTCTTCACAGTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ECLTRAGSALAVPLIYWEPSFHL*SLHSCL Trigger: AAGACAACTGTGAAGAGACAACAAATGAAAAGAAGG...CTCCCAGTATATAAGGGGAACAGCCAGAGCACTTCCTGCCCTTGTGAGGCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS CCA 72 bp | GCCACCGGAGCTCCCCGCTTTCCACCTCCCCTTCAGTaGGTTCCACCACTATGGAGGGCAGGCGGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATGAPRFPPPLQ*VPPLWRAGGPS Trigger: TGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAGGGGAGGTGGAAAGCGGGGAGCTCCGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS CCA 72 bp | CGCTTTCCACCTCCCCTTCAGTGGGTTCCACCACTATaGAGGGCAGGCGGTCCTTCAGCTTGCAGCAACGGT | + |
|
Preference number: 6 (lower is better) Translates to: RFPPPLQWVPPL*RAGGPSACSNG Trigger: ACCGTTGCTGCAAGCTGAAGGACCGCCTGCCCTCCATAGTGGTGGAACCCACTGAAGGGGAGGTGGAAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS CCA 72 bp | ATCCTTGCGGGGGCTGAGACCAATCTCTTCCATGGATaGAGCGTTCATCATCACCTCGGTCATCTCAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ILAGAETNLFHG*SVHHHLGHLSR Trigger: TCGGCTGAGATGACCGAGGTGATGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024857.14 ENSMUST00000148556.2 |
||
| CDS TCA 72 bp | CAGGCGGTCCTTCAGCTTGCAGCAACGGTCAAAGTCTaGTGGGTCCGGAAAGATCTGATAGGAAAGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: QAVLQLAATVKV*WVRKDLIGKAI Trigger: GATGGCCTTTCCTATCAGATCTTTCCGGACCCATCAGACTTTGACCGTTGCTGCAAGCTGAAGGACCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS TCA 72 bp | CCAATCCCTGATAGGAAAGGCCATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGGATGGAGCGTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: PIPDRKGHPCGG*DQSLPWMERSS Trigger: TGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATGGCCTTTCCTATCAGGGATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148556.2 |
||
| CDS CCA 72 bp | TTTGTTGTCTCTTCACAGTTGTCTTGCTCATCCTCCTaGACCAGGAATTCCTCAGGAGGCCACCGGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FVVSSQLSCSSS*TRNSSGGHRSS Trigger: GGAGCTCCGGTGGCCTCCTGAGGAATTCCTGGTCCAGGAGGATGAGCAAGACAACTGTGAAGAGACAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||
| CDS TCA 72 bp | GAAAGATCTGATAGGAAAGGCCATCCTTGCGGGGGCTaGGACCAATCTCTTCCATGGATGGAGCGTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: ERSDRKGHPCGG*DQSLPWMERSS Trigger: TGATGAACGCTCCATCCATGGAAGAGATTGGTCTCAGCCCCCGCAAGGATGGCCTTTCCTATCAGATCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024857.14 |
||