Pregenerated sensors for LAX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051998Ensembl transcript IDs: ENSMUST00000169295.8, ENSMUST00000189524.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATCTTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTaGGGAAGCCTGCTAGTGCCCAGTTCCTCTTGGCCTCCTTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: NLAQEGFSGLPKLLL*GSLLVPSSSWPPSP Trigger: AGGGGAAGGAGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTGCCCGGGGCCACAGCTaGTTGGTAGCCAGCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: NRAPVVLHPHQLFSSWKSARGHS*LVASWS Trigger: ACTCCAGCTGGCTACCAAGCAGCTGTGGCCCCGGGC...AGATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTACTCTAAGTGCTATGTaGCTTTTTATCCCCAACATC | + |
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Preference number: 2 (lower is better) Translates to: CNPPASTGLLSFYTLTSSTLSAM*LFIPNI Trigger: GATGTTGGGGATAAAAAGGCACATAGCACTTAGAGT...AGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAGAGCCTAAACTTTTGCTTTaGGGAAGCCTGCTAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: ERHGEMNEIGVHDVKFTEPKLLL*GSLLVP Trigger: GGGCACTAGCAGGCTTCCCCAAAGCAAAAGTTTAGG...CTCTGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR CAA 90 bp | CTTAAAGGGAACCTGCCCCTCCTTATCTACAATAGACTAACTTATTaGTACACATTGAAAGTAGTTTCACATCCTAAGGGTGAGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LKGNLPLLIYNRLTY*YTLKVVSHPKGEMD Trigger: GTCCATCTCACCCTTAGGATGTGAAACTACTTTCAATGTGTACAAATAAGTTAGTCTATTGTAGATAAGGAGGGGCAGGTTCCCTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTCCCACAGCCTGATCCTCCTTTaGGCCTGCCCGGGGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: GSCRSTPSPALLKLEISHSLILL*ACPGPQ Trigger: CTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCT...GTGGGAGATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGTATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACAGTGCCCAGTTCCTCTaGGCCTCCTTCCCCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GRYLICNPPASTGLLSFYSAQFL*ASFPSA Trigger: TGCTGAGGGGAAGGAGGCCAAGAGGAACTGGGCACT...GTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATACCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR TCA 72 bp | CTAAGGGTGAGATGGACGGCTCCAACGGCAGGTATCTaGTCTGTAATCCACCAGCATCAACAGGGCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LRVRWTAPTAGI*SVIHQHQQGSC Trigger: ACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATACCTGCCGTTGGAGCCGTCCATCTCACCCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR TCA 72 bp | ATGCTGGGGTTACTTCTGGAAGTTCTGACACAGACATaGTGTGTTGAGGAGGCCAGGTGCCTGCACATCTGG | + |
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Preference number: 3 (lower is better) Translates to: MLGLLLEVLTQT*CVEEARCLHIW Trigger: CCAGATGTGCAGGCACCTGGCCTCCTCAACACATCATGTCTGTGTCAGAACTTCCAGAAGTAACCCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189524.2 |
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| 3UTR CCA 72 bp | CAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTaGGGAAGCCTGCTAGTGCCCAGTTCCTCTTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: QEGFSGLPKLLL*GSLLVPSSSWP Trigger: AGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAGAGAATCAACGGGGCCACAGCTGCTaGGTAGCCAGCTGGAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: HGEMNEIGVHDVKFTENQRGHSC*VASWSL Trigger: CAAACTCCAGCTGGCTACCAAGCAGCTGTGGCCCCG...TTGATTCTCTGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAGAGGAGCTAACAGCAATCTaGCTCAGGAAGGATTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: ERHGEMNEIGVHDVKFTEELTAI*LRKDSL Trigger: CAGAGAATCCTTCCTGAGCAAGATTGCTGTTAGCTC...CTCTGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGGCCACAGCTGCTTGGTAGCCAGGGCTGTCAGATGCTCTaGAGAGGAGGCTCTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PSLILLLACPGPQLLGSQGCQML*RGGSRY Trigger: GTACCGAGAGCCTCCTCTCCAGAGCATCTGACAGCC...CTGGCTACCAAGCAGCTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | CAAGCTGGAAATCTCCCACTACCCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGCTGAGTTCCTTCTTGTaGCCTCTGGAGGGGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: QAGNLPLPQPDPPFGLPGLSSFL*PLEGPG Trigger: CCCCGGCCCCTCCAGAGGTCACAAGAAGGAACTCAG...CCCGGGCAGGCCAAAAGGAGGATCAGGCTGGGGTAGTGGGAGATTTCCAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGGCCACAGCTGCTTGGTAGCCAGAGGTGCCTGCACATCTaGGGCACTGTGCCATTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSLILLLACPGPQLLGSQRCLHI*GTVPLS Trigger: TGACAATGGCACAGTGCCCCAGATGTGCAGGCACCT...CTGGCTACCAAGCAGCTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR CAA 72 bp | CTGGAAATCTCCCACTACCCCAGCCTGATCCTCCTTTaGGCCTGCCCGGGGCCACAGCTGCTTGGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LEISHYPSLILL*ACPGPQLLGSQ Trigger: CTGGCTACCAAGCAGCTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCTGGGGTAGTGGGAGATTTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGGCCACAGCTGCTTGGTAGCCAGGGAGGCTCTCGGTACTaGAACCACTCAACTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: PSLILLLACPGPQLLGSQGGSRY*NHSTDV Trigger: GACATCAGTTGAGTGGTTTCAGTACCGAGAGCCTCC...CTGGCTACCAAGCAGCTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TGGGGAAGCCTGCTAGTGCCCAGTTCCTCTTGGCCTCCTTCCCCTCAGCAAGTGGAGTCCCCTGCCGAGTaGTGGGCTCTGAGTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WGSLLVPSSSWPPSPQQVESPAE*WALSSF Trigger: GAAGGAACTCAGAGCCCAGCACTCGGCAGGGGACTC...CACTTGCTGAGGGGAAGGAGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | CAAGCTGGAAATCTCCCACTACCCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGCTCCCCAGCTCTGTCTaGTGCCGGGGCAAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QAGNLPLPQPDPPFGLPGLPSSV*CRGKKS Trigger: TGACTTCTTGCCCCGGCAGCAGACAGAGCTGGGGAG...CCCGGGCAGGCCAAAAGGAGGATCAGGCTGGGGTAGTGGGAGATTTCCAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | CAAGCTGGAAATCTCCCACTACCCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGCAAAGCCAGGGAAGATaGTCTGGCCTTTCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QAGNLPLPQPDPPFGLPGQSQGR*SGLSLP Trigger: AGGGAGAGAAAGGCCAGATCATCTTCCCTGGCTTTG...CCCGGGCAGGCCAAAAGGAGGATCAGGCTGGGGTAGTGGGAGATTTCCAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGGCCACAGCTGCTTGGTAGCCAGGAATACTCCACAGTATaGACGGACACTCTATGCATC | + |
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Preference number: 4 (lower is better) Translates to: PSLILLLACPGPQLLGSQEYSTV*TDTLCI Trigger: GATGCATAGAGTGTCCGTTCATACTGTGGAGTATTC...CTGGCTACCAAGCAGCTGTGGCCCCGGGCAGGCCAAAAGGAGGATCAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | TGGGGAAGCCTGCTAGTGCCCAGTTCCTCTTGGCCTCCTTCCCCTCAGCAAGTGGTTCTGACACAGACATaGTGTGTTGAGGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WGSLLVPSSSWPPSPQQVVLTQT*CVEEAR Trigger: CCTGGCCTCCTCAACACATCATGTCTGTGTCAGAAC...CACTTGCTGAGGGGAAGGAGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTCCCACCCGAGTGCTGGGCTCTaGGTTCCTTCTTGTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: GSCRSTPSPALLKLEISHPSAGL*VPSCDL Trigger: GAGGTCACAAGAAGGAACTCAGAGCCCAGCACTCGG...GTGGGAGATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTCCCACGGCTCGATGTCTGGGTaGAGGCAGAGTCAACGATGG | + |
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Preference number: 4 (lower is better) Translates to: GSCRSTPSPALLKLEISHGSMSG*RQSQRW Trigger: CCATCGTTGACTCTGCCTCCACCCAGACATCGAGCC...GTGGGAGATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | TGGGGAAGCCTGCTAGTGCCCAGTTCCTCTTGGCCTCCTTCCCCTCAGCAAGTGGTGAATCACTGCACTTaGGTCCTGGAGCCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: WGSLLVPSSSWPPSPQQVVNHCT*VLEPKN Trigger: GTTTTTGGGCTCCAGGACCCAAGTGCAGTGATTCAC...CACTTGCTGAGGGGAAGGAGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR CAA 72 bp | TTTGCTTTGGGGAAGCCTGCTAGTGCCCAGTTCCTCTaGGCCTCCTTCCCCTCAGCAAGTGAGTCCCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: FALGKPASAQFL*ASFPSASESRD Trigger: ATCTCGGGACTCACTTGCTGAGGGGAAGGAGGCCAAGAGGAACTGGGCACTAGCAGGCTTCCCCAAAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | AACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTCCTTCTTGTGACCTCTaGAGGGGCCGGGGTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NRAPVVLHPHQLFSSWKSPSCDL*RGRGAV Trigger: TACAGCACCCCGGCCCCTCCAGAGGTCACAAGAAGG...AGATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACACCCTCGTTGAGGAGGCCAGGTaGCTGCACATCTGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: YLICNPPASTGLLSFYTLVEEAR*LHIWGT Trigger: AGTGCCCCAGATGTGCAGGCACCTGGCCTCCTCAAC...GAGGGTGTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | TTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGAAGCCTGCAGGGAACCATTGGCTTaGGGGGCCTCAGGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLRKDSLDFLNFCFGEACREPLA*GASGSG Trigger: CCCTGAGCCTGAGGCCCCCCAAGCCAATGGTTCCCT...GCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATACAGACATGATGTGTTaGGGAGGCCAGGTGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: STGLLSFYTLTSSSQAGNTDMMC*GGQVPA Trigger: TGCAGGCACCTGGCCTCCTCAACACATCATGTCTGT...ATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | CAAGCTGGAAATCTCCCACTACCCCAGCCTGATCCTCCTTTTGGCCTGCCCGGGCCAACCCTGTCATATTaGCGTAGTCATTTGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QAGNLPLPQPDPPFGLPGPTLSY*RSHLKS Trigger: AGACTTCAAATGACTACGTCAATATGACAGGGTTGG...CCCGGGCAGGCCAAAAGGAGGATCAGGCTGGGGTAGTGGGAGATTTCCAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACACCCTCCTCAGGGCTGTCAGATaGTCTGGAGAGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLICNPPASTGLLSFYTLLRAVR*SGEEAL Trigger: GAGAGCCTCCTCTCCAGAGCATCTGACAGCCCTGAG...GAGGGTGTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTCCTGCTTCCAGTCCCTaGCTTCTAACTCAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: CNPPASTGLLSFYTLTSSPASSP*LLTQQP Trigger: TGGTTGCTGAGTTAGAAGGCAGGGACTGGAAGCAGG...AGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | TCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATAACCATCGTGGTCCGTaGCATTCCCACAGCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: STGLLSFYTLTSSSQAGNNHRGP*HSHSLH Trigger: ATGCAGGCTGTGGGAATGCCACGGACCACGATGGTT...ATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGAAGCCTGCTTCCCACAGCCTGCATaGCCTCCTTCAGCAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LLRKDSLDFLNFCFGEACFPQPA*PPSANS Trigger: GGAGTTTGCTGAAGGAGGGCATGCAGGCTGTGGGAA...GCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGTATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACCTTCTCTATGGACCATaGCACTGTCCTCACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GRYLICNPPASTGLLSFYLLYGP*HCPHSV Trigger: CACAGAGTGAGGACAGTGCCATGGTCCATAGAGAAG...GTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATACCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAATCTTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGTCTCCGTCGCTGAGTaGATCACTGCACTTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TAILLRKDSLDFLNFCFGVSVAE*ITALGS Trigger: GGACCCAAGTGCAGTGATTCACTCAGCGACGGAGAC...CCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAAGATTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | ATAGAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACATCTCTCCCTGCAGGCTaGCAAGAGTCCCCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: IERHGEMNEIGVHDVKFTSLPAG*QESPAE Trigger: CTCGGCAGGGGACTCTTGGCAGCCTGCAGGGAGAGA...TGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | CATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAGAGAATCAAAGGAGGCCAGGTGCCTaGACATCTGGGGCACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: HGEMNEIGVHDVKFTENQRRPGA*TSGALC Trigger: GCACAGTGCCCCAGATGTGCAGGCACCTGGCCTCCT...TTGATTCTCTGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | TCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCAGGAGTGCTTTCTATaGGAGTTAGAGTCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: STGLLSFYTLTSSSQAGNQECFL*ELESHR Trigger: CCTGTGAGACTCTAACTCGCATAGAAAGCACTCCTG...ATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| 3UTR CAA 72 bp | CTTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTaGCTTTGGGGAAGCCTGCTAGTGCCCAGTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LAQEGFSGLPKL*LWGSLLVPSSS Trigger: AGAGGAACTGGGCACTAGCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | TCAACAGGGCTCCTGTCGTTCTACACCCTCACCAGCTCTTCTCAAGCTGGAAATCTTGGAAGACCAAGGTaGTTTTCAGGAGTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: STGLLSFYTLTSSSQAGNLGRPR*FSGVLS Trigger: AGAAAGCACTCCTGAAAATCACCTTGGTCTTCCAAG...ATTTCCAGCTTGAGAAGAGCTGGTGAGGGTGTAGAACGACAGGAGCCCTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | ATAGAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACATGGCCTTTCTCTCCCTaGAGGCTGCCAAGAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: IERHGEMNEIGVHDVKFTWPFSP*RLPRVP Trigger: GGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCA...TGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGTATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACACTCCTTGGAAGAAATaGTGGGGTTACTTCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GRYLICNPPASTGLLSFYTPWKK*WGYFWK Trigger: CTTCCAGAAGTAACCCCAGCATTTCTTCCAAGGAGT...GTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAATCTTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGTCATCAGAAGGATGCTaGGTACCAGGTCCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TAILLRKDSLDFLNFCFGSSEGC*VPGPCF Trigger: GAAGCAGGGACCTGGTACTCAGCATCCTTCTGATGA...CCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAAGATTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGTATCTGATCTGTAATCCACCAGCATCAACAGGGCTCCTGTCGTTCTACCATTTTCATAATCTCTaGAGCACTGAAAAGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GRYLICNPPASTGLLSFYHFHNL*STEKLP Trigger: GGGGAGCTTTTCAGTGCTGCAGAGATTATGAAAATG...GTAGAACGACAGGAGCCCTGTTGATGCTGGTGGATTACAGATCAGATACCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | ATAGAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACACCAGGGAAGATGATCTaGCCTTTCTCTCCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IERHGEMNEIGVHDVKFTPGKMI*PFSPCR Trigger: CCTGCAGGGAGAGAAAGGCCAGATCATCTTCCCTGG...TGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | TTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGAAGCCTGCAATCATTTGACTCCTTaGAAGAAATGCTGGGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LLRKDSLDFLNFCFGEACNHLTP*KKCWGY Trigger: GTAACCCCAGCATTTCTTCCAAGGAGTCAAATGATT...GCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR GCA 90 bp | ACAGCAATCTTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGGTGATTTTCAGGAGTaGTTTCTATGCGAGTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TAILLRKDSLDFLNFCFGGDFQE*FLCELE Trigger: CTCTAACTCGCATAGAAAGCACTCCTGAAAATCACC...CCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAAGATTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CCA 90 bp | ATAGAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAAGTCATAAATATTTTTaGCTCGATGTCTGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IERHGEMNEIGVHDVKFTSHKYF*LDVWVE Trigger: CTCCACCCAGACATCGAGCCAAAAATATTTATGACT...TGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS GCA 90 bp | AGGAGCACGACAAAGCCAGGGAAGATGATCTGGCCTTTCTCTCCCTaGAGGCTGCCAAGAGTCCCCTGCCGAGTGCTGGGCTCTGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RSTTKPGKMIWPFSP*RLPRVPCRVLGSEF Trigger: GAACTCAGAGCCCAGCACTCGGCAGGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCAGATCATCTTCCCTGGCTTTGTCGTGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS GCA 90 bp | AAGATGATCTGGCCTTTCTCTCCCTGCAGGCTGCCAAGAGTCCCCTaGCGAGTGCTGGGCTCTGAGTTCCTTCTTGTGACCTCTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KMIWPFSPCRLPRVP*RVLGSEFLLVTSGG Trigger: CCCTCCAGAGGTCACAAGAAGGAACTCAGAGCCCAGCACTCGGCAGGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCAGATCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | ACCAGGATGATGGTCAGGAGCACGACAAAGCCAGGGAAGATGATCTaGCCTTTCTCTCCCTGCAGGCTGCCAAGAGTCCCCTGCCGAGTG | + |
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Preference number: 5 (lower is better) Translates to: TRMMVRSTTKPGKMI*PFSPCRLPRVPCRV Trigger: CACTCGGCAGGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCAGATCATCTTCCCTGGCTTTGTCGTGCTCCTGACCATCATCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | AATCACTGCACTTGGGTCCTGGAGCCCAAAAACCATCGTGGTCCGTaGCATTCCCACAGCCTGCATGCCCTCCTTCAGCAAACTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: NHCTWVLEPKNHRGP*HSHSLHALLQQTPA Trigger: GGCTGGAGTTTGCTGAAGGAGGGCATGCAGGCTGTGGGAATGCCACGGACCACGATGGTTTTTGGGCTCCAGGACCCAAGTGCAGTGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | CTGAGTGAATCACTGCACTTGGGTCCTGGAGCCCAAAAACCATCGTaGTCCGTGGCATTCCCACAGCCTGCATGCCCTCCTTCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LSESLHLGPGAQKPS*SVAFPQPACPPSAN Trigger: GTTTGCTGAAGGAGGGCATGCAGGCTGTGGGAATGCCACGGACCACGATGGTTTTTGGGCTCCAGGACCCAAGTGCAGTGATTCACTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS GCA 90 bp | CTTCATCAGAAGGATGCTGAGTACCAGGTCCCTGCTTCCAGTCCCTaGCTTCTAACTCAGCAACCAGCACAGTCTCATAGTCACTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LHQKDAEYQVPASSP*LLTQQPAQSHSHWS Trigger: ACTCCAGTGACTATGAGACTGTGCTGGTTGCTGAGTTAGAAGGCAGGGACTGGAAGCAGGGACCTGGTACTCAGCATCCTTCTGATGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | CATAGTCACTGGAGTCTTCGCTTGACTGCTCTTCTCTATGGACCATaGCACTGTCCTCACTCTGTGCCGACGGCTGAAATGCCATATGAT | + |
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Preference number: 5 (lower is better) Translates to: HSHWSLRLTALLYGP*HCPHSVPTAEMPYD Trigger: ATCATATGGCATTTCAGCCGTCGGCACAGAGTGAGGACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | AGTCCCTGCCTTCTAACTCAGCAACCAGCACAGTCTCATAGTCACTaGAGTCTTCGCTTGACTGCTCTTCTCTATGGACCATGGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: SPCLLTQQPAQSHSH*SLRLTALLYGPWHC Trigger: ACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATGAGACTGTGCTGGTTGCTGAGTTAGAAGGCAGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CAA 90 bp | TTGCTCAGGAAGGATTCTCTGGACTTCCTAAACTTTTGCTTTGGGGAAGCCTGCCACTGGAGTCTTCGCTaGACTGCTCTTCTCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: LLRKDSLDFLNFCFGEACHWSLR*TALLYG Trigger: TCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTG...GCAGGCTTCCCCAAAGCAAAAGTTTAGGAAGTCCAGAGAATCCTTCCTGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 90 bp | ATAAATATTTTTGGCTCGATGTCTGGGTGGAGGCAGAGTCAACGATaGAGCTACTTGGAAGTAAGGAACAGGCCGCTTCTTCTGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: INIFGSMSGWRQSQR*SYLEVRNRPLLLFL Trigger: AAGAAACAGAAGAAGCGGCCTGTTCCTTACTTCCAAGTAGCTCCATCGTTGACTCTGCCTCCACCCAGACATCGAGCCAAAAATATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 90 bp | AGTCTCACAGGTGTCCTCTACTGTGGGGATATTGACATAATCATTTaGCTCCTTGGAAGAAATGCTGGGGTTACTTCTGGAAGTTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SLTGVLYCGDIDIII*LLGRNAGVTSGSSD Trigger: GTCAGAACTTCCAGAAGTAACCCCAGCATTTCTTCCAAGGAGTCAAATGATTATGTCAATATCCCCACAGTAGAGGACACCTGTGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 90 bp | CTATGCGAGTTAGAGTCTCACAGGTGTCCTCTACTGTGGGGATATTaGCATAATCATTTGACTCCTTGGAAGAAATGCTGGGGTTACTTC | + |
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Preference number: 5 (lower is better) Translates to: LCELESHRCPLLWGY*HNHLTPWKKCWGYF Trigger: GAAGTAACCCCAGCATTTCTTCCAAGGAGTCAAATGATTATGTCAATATCCCCACAGTAGAGGACACCTGTGAGACTCTAACTCGCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CAA 90 bp | AACCTGCCCCTCCTTATCTACAATAGACTAACTTATTTGTACACATTGAAAGTACACAGACATGATGTGTaGAGGAGGCCAGGTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: NLPLLIYNRLTYLYTLKVHRHDV*RRPGAC Trigger: GCAGGCACCTGGCCTCCTCAACACATCATGTCTGTG...TACTTTCAATGTGTACAAATAAGTTAGTCTATTGTAGATAAGGAGGGGCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAAGGCATGGGGAGATGAATGAGATTGGGGTACATGATGTGAAATTCACAAGTGAATCACTGCACTaGGGTCCTGGAGCCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: IERHGEMNEIGVHDVKFTSESLH*GPGAQK Trigger: TTTTTGGGCTCCAGGACCCAAGTGCAGTGATTCACT...TGTGAATTTCACATCATGTACCCCAATCTCATTCATCTCCCCATGCCTTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS-3UTR CAA 90 bp | AACCTGCCCCTCCTTATCTACAATAGACTAACTTATTTGTACACATTGAAAGTACCAGCCGCAGGGCACTaGGAAGACCAAGGTGATTTT | + |
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Preference number: 5 (lower is better) Translates to: NLPLLIYNRLTYLYTLKVPAAGH*EDQGDF Trigger: AAAATCACCTTGGTCTTCCAAGTGCCCTGCGGCTGG...TACTTTCAATGTGTACAAATAAGTTAGTCTATTGTAGATAAGGAGGGGCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS GCA 72 bp | TGGCCTTTCTCTCCCTGCAGGCTGCCAAGAGTCCCCTaGCGAGTGCTGGGCTCTGAGTTCCTTCTTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: WPFSPCRLPRVP*RVLGSEFLLVT Trigger: GGTCACAAGAAGGAACTCAGAGCCCAGCACTCGGCAGGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | TCACTGCACTTGGGTCCTGGAGCCCAAAAACCATCGTaGTCCGTGGCATTCCCACAGCCTGCATGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLHLGPGAQKPS*SVAFPQPACPP Trigger: AGGAGGGCATGCAGGCTGTGGGAATGCCACGGACCACGATGGTTTTTGGGCTCCAGGACCCAAGTGCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | ATGGTCAGGAGCACGACAAAGCCAGGGAAGATGATCTaGCCTTTCTCTCCCTGCAGGCTGCCAAGAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MVRSTTKPGKMI*PFSPCRLPRVP Trigger: GGGGACTCTTGGCAGCCTGCAGGGAGAGAAAGGCCAGATCATCTTCCCTGGCTTTGTCGTGCTCCTGACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | ACTTGGGTCCTGGAGCCCAAAAACCATCGTGGTCCGTaGCATTCCCACAGCCTGCATGCCCTCCTTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TWVLEPKNHRGP*HSHSLHALLQQ Trigger: TTGCTGAAGGAGGGCATGCAGGCTGTGGGAATGCCACGGACCACGATGGTTTTTGGGCTCCAGGACCCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | TGGAGTCTTCGCTTGACTGCTCTTCTCTATGGACCATaGCACTGTCCTCACTCTGTGCCGACGGCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: WSLRLTALLYGP*HCPHSVPTAEM Trigger: CATTTCAGCCGTCGGCACAGAGTGAGGACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 72 bp | GATAAATCGTCTCCGTCGCTGAGTGAATCACTGCACTaGGGTCCTGGAGCCCAAAAACCATCGTGGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DKSSPSLSESLH*GPGAQKPSWSV Trigger: CACGGACCACGATGGTTTTTGGGCTCCAGGACCCAAGTGCAGTGATTCACTCAGCGACGGAGACGATTTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | TTTGGCTCGATGTCTGGGTGGAGGCAGAGTCAACGATaGAGCTACTTGGAAGTAAGGAACAGGCCGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FGSMSGWRQSQR*SYLEVRNRPLL Trigger: AAGAAGCGGCCTGTTCCTTACTTCCAAGTAGCTCCATCGTTGACTCTGCCTCCACCCAGACATCGAGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 72 bp | CATGCCCTCCTTCAGCAAACTCCAGCCGCAGGGCACTaGGAAGACCAAGGTGATTTTCAGGAGTGCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: HALLQQTPAAGH*EDQGDFQECFL Trigger: TAGAAAGCACTCCTGAAAATCACCTTGGTCTTCCAAGTGCCCTGCGGCTGGAGTTTGCTGAAGGAGGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 90 bp | TTTGGCTCGATGTCTGGGTGGAGGCAGAGTCAACGATGGAGCTACTaGGAAGTAAGGAACAGGCCGCTTCTTCTGTTTCTTCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FGSMSGWRQSQRWSY*EVRNRPLLLFLPAP Trigger: TGGAGCTGGAAGAAACAGAAGAAGCGGCCTGTTCCTTACTTCCAAGTAGCTCCATCGTTGACTCTGCCTCCACCCAGACATCGAGCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 90 bp | CTAACTCAGCAACCAGCACAGTCTCATAGTCACTGGAGTCTTCGCTaGACTGCTCTTCTCTATGGACCATGGCACTGTCCTCACTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LTQQPAQSHSHWSLR*TALLYGPWHCPHSV Trigger: CACAGAGTGAGGACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATGAGACTGTGCTGGTTGCTGAGTTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 72 bp | AACCAGCACAGTCTCATAGTCACTGGAGTCTTCGCTTaGCTGCTCTTCTCTATGGACCATGGCACTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: NQHSLIVTGVFA*LLFSMDHGTVL Trigger: GAGGACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATGAGACTGTGCTGGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | CTGTCTGCTGCCGGGGCAAGAAGTCATAAATATTTTTaGCTCGATGTCTGGGTGGAGGCAGAGTCAACGATG | + |
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Preference number: 6 (lower is better) Translates to: LSAAGARSHKYF*LDVWVEAESTM Trigger: CATCGTTGACTCTGCCTCCACCCAGACATCGAGCCAAAAATATTTATGACTTCTTGCCCCGGCAGCAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 72 bp | CAACCAGCACAGTCTCATAGTCACTGGAGTCTTCGCTaGACTGCTCTTCTCTATGGACCATGGCACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QPAQSHSHWSLR*TALLYGPWHCP Trigger: AGGACAGTGCCATGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATGAGACTGTGCTGGTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 72 bp | ATGTCTGGGTGGAGGCAGAGTCAACGATGGAGCTACTaGGAAGTAAGGAACAGGCCGCTTCTTCTGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: MSGWRQSQRWSY*EVRNRPLLLFL Trigger: AAGAAACAGAAGAAGCGGCCTGTTCCTTACTTCCAAGTAGCTCCATCGTTGACTCTGCCTCCACCCAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | CAGAGTCGGCAGCTGGCTCTCATTGGTATCTACCCATaGGACATTTTCATAATCTCTGCAGCACTGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QSRQLALIGIYP*DIFIISAALKS Trigger: GCTTTTCAGTGCTGCAGAGATTATGAAAATGTCCCATGGGTAGATACCAATGAGAGCCAGCTGCCGACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CCA 72 bp | CTTCTAACTCAGCAACCAGCACAGTCTCATAGTCACTaGAGTCTTCGCTTGACTGCTCTTCTCTATGGACCA | + |
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Preference number: 6 (lower is better) Translates to: LLTQQPAQSHSH*SLRLTALLYGP Trigger: TGGTCCATAGAGAAGAGCAGTCAAGCGAAGACTCCAGTGACTATGAGACTGTGCTGGTTGCTGAGTTAGAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS GCA 72 bp | TTGGAAGACCAAGGTGATTTTCAGGAGTGCTTTCTATaGGAGTTAGAGTCTCACAGGTGTCCTCTACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEDQGDFQECFL*ELESHRCPLLW Trigger: CCACAGTAGAGGACACCTGTGAGACTCTAACTCGCATAGAAAGCACTCCTGAAAATCACCTTGGTCTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS CAA 90 bp | TTCATAATCTCTGCAGCACTGAAAAGCTCCCCTGGGTCGATTCTCTaGGATGTTCTCAAGATCCAACCCTGTCATATTGACGTAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: FIISAALKSSPGSIL*DVLKIQPCHIDVVI Trigger: AATGACTACGTCAATATGACAGGGTTGGATCTTGAGAACATCCAAGAGAATCGACCCAGGGGAGCTTTTCAGTGCTGCAGAGATTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 72 bp | CATCTGGGGCACTGTGCCATTGTCATAGATGTTTACTaGATACTCCACAGTATGAACGGACACTCTATGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLGHCAIVIDVY*ILHSMNGHSMH Trigger: ATGCATAGAGTGTCCGTTCATACTGTGGAGTATTCAGTAAACATCTATGACAATGGCACAGTGCCCCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 72 bp | TTAGAGTCTCACAGGTGTCCTCTACTGTGGGGATATTaGCATAATCATTTGACTCCTTGGAAGAAATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LESHRCPLLWGY*HNHLTPWKKCW Trigger: CCAGCATTTCTTCCAAGGAGTCAAATGATTATGTCAATATCCCCACAGTAGAGGACACCTGTGAGACTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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| CDS TCA 72 bp | TCTCTTGGATGTTCTCAAGATCCAACCCTGTCATATTaGCGTAGTCATTTGAAGTCTGAGATAAATCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLGCSQDPTLSY*RSHLKSEINRL Trigger: GAGACGATTTATCTCAGACTTCAAATGACTACGTCAATATGACAGGGTTGGATCTTGAGAACATCCAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169295.8 |
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