Pregenerated sensors for LAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040751Ensembl transcript IDs: ENSMUST00000036362.13, ENSMUST00000077636.8, ENSMUST00000200737.4, ENSMUST00000200998.4, ENSMUST00000201632.2, ENSMUST00000202085.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTaGAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: DAQCLPGCGAATARV*NLSIPGEQALFSRQ Trigger: CTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTGGGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR TCA 90 bp | AGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTaGGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SVSQAVEQPRPGCET*ASLENRLYSAGSKG Trigger: GCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR TCA 90 bp | GCAGTTTTATTTCCCTATCACCGACGCACAAGGTCCCCGCAGGAATaGAAGATCAGAACAAACTGGAGCCCACTAAGAAACCAAAGCGAT | + |
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Preference number: 1 (lower is better) Translates to: AVLFPYHRRTRSPQE*KIRTNWSPLRNQSD Trigger: ATCGCTTTGGTTTCTTAGTGGGCTCCAGTTTGTTCTGATCTTTCATTCCTGCGGGGACCTTGTGCGTCGGTGATAGGGAAATAAAACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR CAA 90 bp | AGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCGATaGATTGGTTCTCTCCTAGATGTTCTCTGCTGCGGCCACATCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSRSDPPSSGPSSFR*IGSLLDVLCCGHIP Trigger: GGGGATGTGGCCGCAGCAGAGAACATCTAGGAGAGAACCAATCAATCGGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGTTGGGGCTCTGGCGATaGCCAGTGTCTCCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SHGQGVKLEHPWRTGFIQLGLWR*PVSPRL Trigger: CAGCCTGGGAGACACTGGGCATCGCCAGAGCCCCAA...CTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR CAA 90 bp | CAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGCACTaGCTTTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QVLGFQSAQSISSGH*LCPQRSPGHHLRVG Trigger: CCCAACCCTCAAGTGATGCCCTGGACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATATAGACTGTGCTGACTGGAAGCCCAAGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCCAGGGTGTGAAACTTaGGCATCCCTGGAGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SHGQGVKLEHPWRTGFIQPGCET*ASLENR Trigger: CCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGG...CTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR-3UTR TCA 90 bp | CATCTTGCCTCAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGCACCAGGGTGTGAAACTTaGGCATCCCTGGAGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: HLASGLGLPVSTVYILWAPGCET*ASLENR Trigger: CCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGG...TGCCCAGAGGATATAGACTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR-3UTR TCA 90 bp | GTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTGTCCAGGGCATCACTTaGGGGTTGGGGCTCTGGCGA | + |
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Preference number: 2 (lower is better) Translates to: VKLEHPWRTGFIQQAVKAVQGIT*GLGLWR Trigger: TCGCCAGAGCCCCAACCCTCAAGTGATGCCCTGGAC...AGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR CAA 90 bp | CATGTGTGCAGCGCCTGCTCTCACACTCACAGGGTTTATTGGTGTTaGGTGAGGGGGCAGTTTTATTTCCCTATCACCGACGCACAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HVCSACSHTHRVYWC*VRGQFYFPITDAQG Trigger: ACCTTGTGCGTCGGTGATAGGGAAATAAAACTGCCCCCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR-3UTR GCA 90 bp | CGACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAATTGGGGCTCTGGCGATaGCCAGTGTCTCCCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RLQQLQLTTKRVIATVLELGLWR*PVSPRL Trigger: CAGCCTGGGAGACACTGGGCATCGCCAGAGCCCCAA...TTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTGTGTCTCCCAGGCTGTaGAGCAGCCACGGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TPATSVNHKKSHSNSPRSVSPRL*SSHGQG Trigger: ACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACAC...ACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCTCTGGGCACTTGCTTTaGCCCCAAAGAAGTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LQQLQLTTKRVIATVLEVSGHLL*PQRSPG Trigger: CCCTGGACTTCTTTGGGGGCAAAGCAAGTGCCCAGA...GACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACATTGACAATATTAAATACGACTCCAGCAACTTCAGTTAACCACAAAAAGGTGTCTCCCAGGCTGTaGAGCAGCCACGGCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LTLTILNTTPATSVNHKKVSPRL*SSHGQG Trigger: ACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACAC...CTTTTTGTGGTTAACTGAAGTTGCTGGAGTCGTATTTAATATTGTCAATGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCTCTTGCCTCAGGTCTTaGGCTTCCAGTCAGCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LQQLQLTTKRVIATVLEVSCLRS*ASSQHS Trigger: ACTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGA...GACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCAACAAAACCCACAAATaGCACTGTTGTGCCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: LQQLQLTTKRVIATVLEVNKTHK*HCCASF Trigger: AAATGAGGCACAACAGTGGCATTTGTGGGTTTTGTT...GACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACATTGACAATATTAAATACGACTCCAGCAACTTCAGTTAACCACAAAAAGCAAATGCCACTGTTGTaGCTCATTTTAGATGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LTLTILNTTPATSVNHKKQMPLL*LILDVR Trigger: TCTCACATCTAAAATGAGGCACAACAGTGGCATTTG...CTTTTTGTGGTTAACTGAAGTTGCTGGAGTCGTATTTAATATTGTCAATGTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR CCA 72 bp | TTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTaGGGCTCTGGCGATGCCCAGTGTCTCCCAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LPPKKSRASLEG*GSGDAQCLPGC Trigger: ACAGCCTGGGAGACACTGGGCATCGCCAGAGCCCCAACCCTCAAGTGATGCCCTGGACTTCTTTGGGGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR TCA 72 bp | TGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTaGAACTTGAGCATCCCTTCCTTCCGATTGATTGGT | + |
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Preference number: 3 (lower is better) Translates to: CLPGCGAATARV*NLSIPSFRLIG Trigger: ACCAATCAATCGGAAGGAAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201632.2 |
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| 3UTR CCA 72 bp | GGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTaGGCACTTGCTTTGCCCCCAAAGAAGTCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GLGLPVSTVYIL*ALALPPKKSRA Trigger: TGCCCTGGACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATATAGACTGTGCTGACTGGAAGCCCAAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR CCA 72 bp | TCCCCCATCCTCGGGCCCTTCTTCCTTCCGATTGATTaGTTCTCTCCTAGATGTTCTCTGCTGCGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SPILGPFFLPID*FSPRCSLLRPH Trigger: ATGTGGCCGCAGCAGAGAACATCTAGGAGAGAACCAATCAATCGGAAGGAAGAAGGGCCCGAGGATGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| 3UTR CCA 72 bp | AGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTaGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSHGQGVKLEHP*RTGFIQQAVKA Trigger: AGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| 3UTR CCA 72 bp | GTGTGCAGCGCCTGCTCTCACACTCACAGGGTTTATTaGTGTTTGGTGAGGGGGCAGTTTTATTTCCCTATC | + |
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Preference number: 3 (lower is better) Translates to: VCSACSHTHRVY*CLVRGQFYFPI Trigger: GATAGGGAAATAAAACTGCCCCCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR TCA 72 bp | TTTCCCTATCACCGACGCACAAGGTCCCCGCAGGAATaGAAGATCAGAACAAACTGGAGCCCACTAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: FPYHRRTRSPQE*KIRTNWSPLRN Trigger: GTTTCTTAGTGGGCTCCAGTTTGTTCTGATCTTTCATTCCTGCGGGGACCTTGTGCGTCGGTGATAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR GCA 72 bp | GGGAAGGTGTTTAAACAAAGGCATGTGTGCAGCGCCTaGTCTCACACTCACAGGGTTTATTGGTGTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GKVFKQRHVCSA*SHTHRVYWCLV Trigger: CACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACACATGCCTTTGTTTAAACACCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 |
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| 3UTR GCA 72 bp | AACACACAGGGGAAGGTGTTTAAACAAAGGCATGTGTaGAGCGCCTGCTCTCACACTCACAGGGTTTATTGG | + |
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Preference number: 3 (lower is better) Translates to: NTQGKVFKQRHV*SACSHTHRVYW Trigger: CCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACACATGCCTTTGTTTAAACACCTTCCCCTGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 |
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| 3UTR-3UTR CAA 90 bp | TATTGGTGTTTGGTGAGGGGGCAGTTTTATTTCCCTATCACCGACGCACAAGGTATATCCTCTGGGCACTaGCTTTGCCCCCAAAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: YWCLVRGQFYFPITDAQGISSGH*LCPQRS Trigger: ACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATAT...ACCTTGTGCGTCGGTGATAGGGAAATAAAACTGCCCCCTCACCAAACACCAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCATCTTGCCTCAGGTCTaGGGCTTCCAGTCAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: LQQLQLTTKRVIATVLEVILPQV*GFQSAQ Trigger: CTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGAT...GACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTATCTTGCCTCAGGTCTaGGGCTTCCAGTCAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TPATSVNHKKSHSNSPRSILPQV*GFQSAQ Trigger: CTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGAT...ACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR-3UTR CAA 90 bp | AATACGACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTATATCCTCTGGGCACTaGCTTTGCCCCCAAAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: NTTPATSVNHKKSHSNSPISSGH*LCPQRS Trigger: ACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATAT...AGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGTCGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| 3UTR TCA 72 bp | CCCATTCCTCTGCTACAGTTAGTACACATAATGCTCTaGGACAGGGAACCCCCTGACATTGACAATATTAAA | + |
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Preference number: 3 (lower is better) Translates to: PIPLLQLVHIML*DREPPDIDNIK Trigger: TTTAATATTGTCAATGTCAGGGGGTTCCCTGTCTCAGAGCATTATGTGTACTAACTGTAGCAGAGGAATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR-3UTR CAA 90 bp | ACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCCACAAATGCCACTGTaGTGCCTCATTTTAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: TPATSVNHKKSHSNSPRSPQMPL*CLILDV Trigger: CACATCTAAAATGAGGCACAACAGTGGCATTTGTGG...ACTTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGGTCCATCTGGGGTCCTaGCCACACCTGCCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CPVSPRLWSSHGQGVKLEVHLGS*PHLPGQ Trigger: CTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGAC...CTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCCTGGACGGGAGCAGTaGACACACAGCCAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CPVSPRLWSSHGQGVKLEPGREQ*THSQAV Trigger: CACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGG...CTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTGGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | GGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCGATTGCCTGGACGGGAGCAGTaGACACACAGCCAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GFSSRSDPPSSGPSSFRLPGREQ*THSQAV Trigger: CACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGG...CAATCGGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTGGGGCTCTGGCGATGGTCCATCTGGGGTCCTaGCCACACCTGCCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCPQRSPGHHLRVGALAMVHLGS*PHLPGQ Trigger: CTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGAC...CATCGCCAGAGCCCCAACCCTCAAGTGATGCCCTGGACTTCTTTGGGGGCAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR TCA 90 bp | CTTGAGGGTTGGGGCTCTGGCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCGGAATCGTCGTCTTCTaGGGGCTTCTGGAAACATCC | + |
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Preference number: 4 (lower is better) Translates to: LEGWGSGDAQCLPGCGAAGIVVF*GLLETS Trigger: GGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCC...GGCTGCTCCACAGCCTGGGAGACACTGGGCATCGCCAGAGCCCCAACCCTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS-3UTR GCA 90 bp | GCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTGGTCCTGGCCACACCTaGCTGGCCAGGGAGTATGTC | + |
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Preference number: 4 (lower is better) Translates to: AVKASVPAQIPHPRALLPGPGHT*LAREYV Trigger: GACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACC...AGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCTTTACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR GCA 90 bp | GTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCCACCTGACTCGGGGGTaGTGGGCTTGCAGACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VKASVPAQIPHPRALLPSHLTRG*WACRRA Trigger: TGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTG...GGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCTTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | GCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTCCTGGACGGGAGCAGTaGACACACAGCCAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AVKASVPAQIPHPRALLPPGREQ*THSQAV Trigger: CACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGG...AGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCTTTACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR TCA 90 bp | GGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCGATTGGGAATCGTCGTCTTCTaGGGGCCTCAAGGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GFSSRSDPPSSGPSSFRLGIVVF*GPQGGR Trigger: TCTCCCACCTTGAGGCCCTCAGAAGACGACGATTCC...CAATCGGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS-3UTR CCA 90 bp | CACATCTTGCCTCAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGGTCCATCTGGGGTCCTaGCCACACCTGCCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HILPQVLGFQSAQSISSGVHLGS*PHLPGQ Trigger: CTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGAC...CCCAGAGGATATAGACTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | GCATGTGTGCAGCGCCTGCTCTCACACTCACAGGGTTTATTGGTGTTTGGTGAGGTCCATCTGGGGTCCTaGCCACACCTGCCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVQRLLSHSQGLLVFGEVHLGS*PHLPGQ Trigger: CTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGAC...CTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACACATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR GCA 90 bp | TCACATAGTCTGGCTCCTCATCTGGGCTTCCTGATAGGGACATTGGTGCACCCAGGTCCTGGCCACACCTaGCTGGCCAGGGAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSLAPHLGFLIGTLVHPGPGHT*LAREYV Trigger: GACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACC...TGGGTGCACCAATGTCCCTATCAGGAAGCCCAGATGAGGAGCCAGACTATGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS-3UTR TCA 90 bp | GCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTGGAATCGTCGTCTTCTaGGGGCTTCTGGAAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: AVKASVPAQIPHPRALLPGIVVF*GLLETS Trigger: GGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCC...AGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCTTTACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | ATCAGGGTCACCCCGGTTTATAAAGCAAGTTCCAGGGTAGCCAGGGGCTACACACTGGCCACACCTGCCTaGCCAGGGAGTATGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRVTPVYKASSRVARGYTLATPA*PGSMSE Trigger: CTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAG...TGTGTAGCCCCTGGCTACCCTGGAACTTGCTTTATAAACCGGGGTGACCCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTGTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTACCTGGACGGGAGCAGTaGACACACAGCCAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGVKLEHPWRTGFIQQAVPGREQ*THSQAV Trigger: CACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGG...TACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
||
| 3UTR CAA 72 bp | TCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCGATaGATTGGTTCTCTCCTAGATGTTCTCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDPPSSGPSSFR*IGSLLDVLCCG Trigger: GCCGCAGCAGAGAACATCTAGGAGAGAACCAATCAATCGGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGTTACCCCACACCCCATTCCTCTGCTACAGTTAGTACACATAATGCTGGTCCTGGCCACACCTaGCTGGCCAGGGAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPGYPTPHSSATVSTHNAGPGHT*LAREYV Trigger: GACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACC...AGCATTATGTGTACTAACTGTAGCAGAGGAATGGGGTGTGGGGTAACCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR CAA 72 bp | GGCTTCCAGTCAGCACAGTCTATATCCTCTGGGCACTaGCTTTGCCCCCAAAGAAGTCCAGGGCATCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFQSAQSISSGH*LCPQRSPGHHL Trigger: CAAGTGATGCCCTGGACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATATAGACTGTGCTGACTGGAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGTGCAGCGCCTGCTCTCACACTCACAGGGTTTATTGGTGTTTGGTGAGGGGAATCGTCGTCTTCTaGGGGCTTCTGGAAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: HVCSACSHTHRVYWCLVRGIVVF*GLLETS Trigger: GGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCC...CCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCTGCACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | GCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTCTCGCCACTGATGGATaGATACTGAGTTCTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVKASVPAQIPHPRALLPLATDG*ILSSGN Trigger: ATTACCAGAACTCAGTATCCATCCATCAGTGGCGAG...AGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCTTTACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR TCA 90 bp | CTCATTTTAGATGTGAGACTGGGGACACATCTTGCCTCAGGTCTTGGGCTTCCAGGAATCGTCGTCTTCTaGGGGCTTCTGGAAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LILDVRLGTHLASGLGLPGIVVF*GLLETS Trigger: GGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCC...TGGAAGCCCAAGACCTGAGGCAAGATGTGTCCCCAGTCTCACATCTAAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
||
| CDS-3UTR GCA 90 bp | CGACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGGTCCTGGCCACACCTaGCTGGCCAGGGAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLQQLQLTTKRVIATVLEGPGHT*LAREYV Trigger: GACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACC...TTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| 3UTR CAA 72 bp | AGCGCCTGCTCTCACACTCACAGGGTTTATTGGTGTTaGGTGAGGGGGCAGTTTTATTTCCCTATCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SACSHTHRVYWC*VRGQFYFPITD Trigger: GTCGGTGATAGGGAAATAAAACTGCCCCCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | AAACCAAAGCGATCCCAGGTTACCCCACACCCCATTCCTCTGCTACAGTTAGTATCAGGACCCTCAAGGTaGGAGAACAGCATCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKRSQVTPHPIPLLQLVSGPSR*ENSILF Trigger: GAACAAGATGCTGTTCTCCCACCTTGAGGGTCCTGA...TACTAACTGTAGCAGAGGAATGGGGTGTGGGGTAACCTGGGATCGCTTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | GCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTTCAGTTCCCGCCTCGCCACTGATGGATaGATACTGAGTTCTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLENRLYSAGSKGFSSRLATDG*ILSSGN Trigger: ATTACCAGAACTCAGTATCCATCCATCAGTGGCGAG...GCGGGAACTGAAGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CCA 90 bp | ATCAGGGTCACCCCGGTTTATAAAGCAAGTTCCAGGGTAGCCAGGGGCTACACATTACTTCCCTCAAGGTaGGAGAACAGCATCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRVTPVYKASSRVARGYTLLPSR*ENSILF Trigger: GAACAAGATGCTGTTCTCCCACCTTGAGGGAAGTAA...TGTGTAGCCCCTGGCTACCCTGGAACTTGCTTTATAAACCGGGGTGACCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077636.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTCTGAGGGCCTCAAGGTaGGAGAACAGCATCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLEHPWRTGFIQQAVKALRASR*ENSILF Trigger: GAACAAGATGCTGTTCTCCCACCTTGAGGCCCTCAG...AGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS-3UTR CCA 90 bp | CCTCATTTTAGATGTGAGACTGGGGACACATCTTGCCTCAGGTCTTGGGCTTCCCTCGCCACTGATGGATaGATACTGAGTTCTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFRCETGDTSCLRSWASLATDG*ILSSGN Trigger: ATTACCAGAACTCAGTATCCATCCATCAGTGGCGAG...GGAAGCCCAAGACCTGAGGCAAGATGTGTCCCCAGTCTCACATCTAAAATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS-3UTR TCA 90 bp | CATTTTAGATGTGAGACTGGGGACACATCTTGCCTCAGGTCTTGGGCTTCCAGTCTGATGGATGGATACTaGGTTCTGGTAATCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFRCETGDTSCLRSWASSLMDGY*VLVILK Trigger: TTTGAGGATTACCAGAACTCAGTATCCATCCATCAG...ACTGGAAGCCCAAGACCTGAGGCAAGATGTGTCCCCAGTCTCACATCTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS TCA 90 bp | TCCATCTGGGGTCCTGGCCACACCTGCCTGGCCAGGGAGTATGTCTaGGCCGCAGCTGAGCTCTGTGCATTTTCTTGCCGGTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SIWGPGHTCLAREYV*AAAELCAFSCRFLC Trigger: GCAGAGGAACCGGCAAGAAAATGCACAGAGCTCAGCTGCGGCTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 90 bp | TTCTCTTCACTCCTGGACGGGAGCAGTGGACACACAGCCAGGCTGTaGCCCCCAACAGCAGCAGCAATAATCCCGACACCGGCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSLLDGSSGHTARL*PPTAAAIIPTPATA Trigger: TGCTGTGGCCGGTGTCGGGATTATTGCTGCTGCTGTTGGGGGCCACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGGAGTGAAGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 90 bp | ACTTGTTTGGAGCTGTGTCCATCTGGGGTCCTGGCCACACCTGCCTaGCCAGGGAGTATGTCTGAGCCGCAGCTGAGCTCTGTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLELCPSGVLATPA*PGSMSEPQLSSVHF Trigger: AAAATGCACAGAGCTCAGCTGCGGCTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 90 bp | ACTCGGGGGTGCTGGGCTTGCAGACGAGCACATTCTCGTAGGAGTTaGAATCGTCGTCTTCTGAGGGCCTCAAGGTGGGAGAACAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TRGCWACRRAHSRRS*NRRLLRASRWENSI Trigger: GATGCTGTTCTCCCACCTTGAGGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS TCA 90 bp | TCCTGGCCACACCTGCCTGGCCAGGGAGTATGTCTGAGCCGCAGCTaGGCTCTGTGCATTTTCTTGCCGGTTCCTCTGCTCGTAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWPHLPGQGVCLSRS*ALCIFLPVPLLVDF Trigger: AAAATCTACGAGCAGAGGAACCGGCAAGAAAATGCACAGAGCTCAGCTGCGGCTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 90 bp | TTGCCGGTTCCTCTGCTCGTAGATTTTCTCATTTCTCTTCACTCCTaGACGGGAGCAGTGGACACACAGCCAGGCTGTGGCCCCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPVPLLVDFLISLHS*TGAVDTQPGCGPQQ Trigger: CTGTTGGGGGCCACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGGAGTGAAGAGAAATGAGAAAATCTACGAGCAGAGGAACCGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS GCA 90 bp | GGTAATCCTCAAAGTCCTCGACACCTGACTCGGGGGTGCTGGGCTTaGAGACGAGCACATTCTCGTAGGAGTTGGAATCGTCGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNPQSPRHLTRGCWA*RRAHSRRSWNRRLL Trigger: CAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTGAGGATTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS CCA 90 bp | ACTCGGGGGTGCTGGGCTTGCAGACGAGCACATTCTCGTAGGAGTTaGAATCGTCGTCTTCTGAGGGCTTCTGGAAACATCCCCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TRGCWACRRAHSRRS*NRRLLRASGNIPSC Trigger: ACAACTGGGGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS GCA 90 bp | CTGAGTTCTGGTAATCCTCAAAGTCCTCGACACCTGACTCGGGGGTaGTGGGCTTGCAGACGAGCACATTCTCGTAGGAGTTGGAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSGNPQSPRHLTRG*WACRRAHSRRSWNR Trigger: ACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTGAGGATTACCAGAACTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS CCA 90 bp | AGTTCTGGTAATCCTCAAAGTCCTCGACACCTGACTCGGGGGTGCTaGGCTTGCAGACGAGCACATTCTCGTAGGAGTTGGAATCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGNPQSPRHLTRGC*ACRRAHSRRSWNRR Trigger: ACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTGAGGATTACCAGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS-3UTR CAA 90 bp | CACATCTTGCCTCAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGGCTCTGTGCATTTTCTaGCCGGTTCCTCTGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HILPQVLGFQSAQSISSGALCIF*PVPLLV Trigger: TACGAGCAGAGGAACCGGCAAGAAAATGCACAGAGC...CCCAGAGGATATAGACTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS-3UTR CAA 90 bp | CATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTTCAGTTCCCGCTGCTCTGTGCATTTTCTaGCCGGTTCCTCTGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HPWRTGFIQQAVKASVPAALCIF*PVPLLV Trigger: TACGAGCAGAGGAACCGGCAAGAAAATGCACAGAGC...AGCGGGAACTGAAGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS-3UTR CAA 90 bp | AGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTTCCTTCCGATTTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLQFPLRSPILGPFFLPIWENSI*FFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCA...AATCGGAAGGAAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTGAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS TCA 90 bp | CTTGCAGACGAGCACATTCTCGTAGGAGTTGGAATCGTCGTCTTCTaGGGGCCTCAAGGTGGGAGAACAGCATCTTGTTCTTCCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LADEHILVGVGIVVF*GPQGGRTASCSSFQ Trigger: TTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS-3UTR CAA 90 bp | GTGAAACTTGAGCATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTGCTCTGTGCATTTTCTaGCCGGTTCCTCTGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VKLEHPWRTGFIQQAVKAALCIF*PVPLLV Trigger: TACGAGCAGAGGAACCGGCAAGAAAATGCACAGAGC...AGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATGCTCAAGTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 |
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| CDS TCA 90 bp | CTTGCAGACGAGCACATTCTCGTAGGAGTTGGAATCGTCGTCTTCTaGGGGCTTCTGGAAACATCCCCAGTTGTAGTAGTTTGTAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LADEHILVGVGIVVF*GLLETSPVVVVCRD Trigger: ATCCCTACAAACTACTACAACTGGGGATGTTTCCAGAAGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS CCA 90 bp | GTTACTTCCTTTGTAGAAGTTCTGGTACCTAGGGGACTCAGGACCTaGAAGAAAGGCCTCAAGGTGGGAGAACAGCATCTTGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTSFVEVLVPRGLRT*KKGLKVGEQHLVLP Trigger: AGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCTTTCTTCCAGGTCCTGAGTCCCCTAGGTACCAGAACTTCTACAAAGGAAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202085.2 |
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| CDS-3UTR CAA 90 bp | ATCAGGGTCACCCCGGTTTATAAAGCAAGTTCCAGGGTAGCCAGGGGCTACACATGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: IRVTPVYKASSRVARGYTWENSI*FFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCA...TGTGTAGCCCCTGGCTACCCTGGAACTTGCTTTATAAACCGGGGTGACCCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 |
||
| CDS CCA 90 bp | TTCTGGTACCTAGGGGACTCAGGACCTGGAAGAAAGGCCTCAAGGTaGGAGAACAGCATCTTGTTCTTCCTTTCAAATGACTTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWYLGDSGPGRKASR*ENSILFFLSNDLFG Trigger: TCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCTTTCTTCCAGGTCCTGAGTCCCCTAGGTACCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202085.2 |
||
| CDS-3UTR CAA 90 bp | CGACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGCTCTGTGCATTTTCTaGCCGGTTCCTCTGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLQQLQLTTKRVIATVLEALCIF*PVPLLV Trigger: TACGAGCAGAGGAACCGGCAAGAAAATGCACAGAGC...TTCTAGGACTGTTGCTATGACTCTTTTTGTGGTTAACTGAAGTTGCTGGAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCCCGCAGGAATGAAAGATCAGAACAAACTGGAGCCCACTAAGAAACCATTTCAAATGACTTGTTaGGAGCTGTGTCCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVPAGMKDQNKLEPTKKPFQMTC*ELCPSG Trigger: CCCAGATGGACACAGCTCCAAACAAGTCATTTGAAA...TGGTTTCTTAGTGGGCTCCAGTTTGTTCTGATCTTTCATTCCTGCGGGGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCGATCCCAGGTTACCCCACACCCCATTCCTCTGCTACAGTTAGTACACATTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: KAIPGYPTPHSSATVSTHWENSI*FFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCA...ATGTGTACTAACTGTAGCAGAGGAATGGGGTGTGGGGTAACCTGGGATCGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
||
| CDS-3UTR CAA 90 bp | CCCACAAATGCCACTGTTGTGCCTCATTTTAGATGTGAGACTGGGGACACATCTTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGAC | + |
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Preference number: 5 (lower is better) Translates to: PTNATVVPHFRCETGDTSWENSI*FFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCA...AGATGTGTCCCCAGTCTCACATCTAAAATGAGGCACAACAGTGGCATTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS CCA 72 bp | CTCCTGGACGGGAGCAGTGGACACACAGCCAGGCTGTaGCCCCCAACAGCAGCAGCAATAATCCCGACACCG | + |
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Preference number: 6 (lower is better) Translates to: LLDGSSGHTARL*PPTAAAIIPTP Trigger: CGGTGTCGGGATTATTGCTGCTGCTGTTGGGGGCCACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 72 bp | GAGCTGTGTCCATCTGGGGTCCTGGCCACACCTGCCTaGCCAGGGAGTATGTCTGAGCCGCAGCTGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ELCPSGVLATPA*PGSMSEPQLSS Trigger: AGAGCTCAGCTGCGGCTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS TCA 72 bp | GGTCCTGGCCACACCTGCCTGGCCAGGGAGTATGTCTaGGCCGCAGCTGAGCTCTGTGCATTTTCTTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GPGHTCLAREYV*AAAELCAFSCR Trigger: CCGGCAAGAAAATGCACAGAGCTCAGCTGCGGCTCAGACATACTCCCTGGCCAGGCAGGTGTGGCCAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS GCA 72 bp | CAAAGTCCTCGACACCTGACTCGGGGGTGCTGGGCTTaGAGACGAGCACATTCTCGTAGGAGTTGGAATCGT | + |
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Preference number: 6 (lower is better) Translates to: QSPRHLTRGCWA*RRAHSRRSWNR Trigger: ACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS GCA 72 bp | GGTAATCCTCAAAGTCCTCGACACCTGACTCGGGGGTaGTGGGCTTGCAGACGAGCACATTCTCGTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GNPQSPRHLTRG*WACRRAHSRRS Trigger: ACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTGAGGATTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS CCA 72 bp | AATCCTCAAAGTCCTCGACACCTGACTCGGGGGTGCTaGGCTTGCAGACGAGCACATTCTCGTAGGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: NPQSPRHLTRGC*ACRRAHSRRSW Trigger: CCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCACCCCCGAGTCAGGTGTCGAGGACTTTGAGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS CCA 72 bp | TGCTGGGCTTGCAGACGAGCACATTCTCGTAGGAGTTaGAATCGTCGTCTTCTGAGGGCCTCAAGGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CWACRRAHSRRS*NRRLLRASRWE Trigger: CTCCCACCTTGAGGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS CCA 72 bp | CCTCTGCTCGTAGATTTTCTCATTTCTCTTCACTCCTaGACGGGAGCAGTGGACACACAGCCAGGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PLLVDFLISLHS*TGAVDTQPGCG Trigger: GCCACAGCCTGGCTGTGTGTCCACTGCTCCCGTCCAGGAGTGAAGAGAAATGAGAAAATCTACGAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CCA 72 bp | TTCCTTTCAAATGACTTGTTTGGAGCTGTGTCCATCTaGGGTCCTGGCCACACCTGCCTGGCCAGGGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: FLSNDLFGAVSI*GPGHTCLAREY Trigger: ATACTCCCTGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CAA 90 bp | CAAGGTGGGAGAACAGCATCTTGTTCTTCCTTTCAAATGACTTGTTaGGAGCTGTGTCCATCTGGGGTCCTGGCCACACCTGCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QGGRTASCSSFQMTC*ELCPSGVLATPAWP Trigger: TGGCCAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CAA 90 bp | CCCTCAAGGTGGGAGAACAGCATCTTGTTCTTCCTTTCAAATGACTaGTTTGGAGCTGTGTCCATCTGGGGTCCTGGCCACACCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PSRWENSILFFLSND*FGAVSIWGPGHTCL Trigger: CAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 |
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| CDS CAA 90 bp | GCCTCAAGGTGGGAGAACAGCATCTTGTTCTTCCTTTCAAATGACTaGTTTGGAGCTGTGTCCATCTGGGGTCCTGGCCACACCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASRWENSILFFLSND*FGAVSIWGPGHTCL Trigger: CAGGCAGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200737.4 ENSMUST00000202085.2 |
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| CDS CCA 72 bp | TGCTGGGCTTGCAGACGAGCACATTCTCGTAGGAGTTaGAATCGTCGTCTTCTGAGGGCTTCTGGAAACATC | + |
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Preference number: 6 (lower is better) Translates to: CWACRRAHSRRS*NRRLLRASGNI Trigger: GATGTTTCCAGAAGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTCGTCTGCAAGCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200998.4 ENSMUST00000201632.2 |
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| CDS TCA 72 bp | GAGCACATTCTCGTAGGAGTTGGAATCGTCGTCTTCTaGGGGCCTCAAGGTGGGAGAACAGCATCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: EHILVGVGIVVF*GPQGGRTASCS Trigger: AGAACAAGATGCTGTTCTCCCACCTTGAGGCCCTCAGAAGACGACGATTCCAACTCCTACGAGAATGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS CAA 90 bp | TGGTACCTAGGGGACTCAGGACCCTCAAGGTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGACTTGTTTGGAGCTGTGTCCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: WYLGDSGPSRWENSI*FFLSNDLFGAVSIW Trigger: CCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGGTCCTGAGTCCCCTAGGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000200998.4 |
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| CDS CCA 72 bp | CTAGGGGACTCAGGACCTGGAAGAAAGGCCTCAAGGTaGGAGAACAGCATCTTGTTCTTCCTTTCAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: LGDSGPGRKASR*ENSILFFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCTTTCTTCCAGGTCCTGAGTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202085.2 |
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| CDS CCA 72 bp | TTTGTAGAAGTTCTGGTACCTAGGGGACTCAGGACCTaGAAGAAAGGCCTCAAGGTGGGAGAACAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FVEVLVPRGLRT*KKGLKVGEQHL Trigger: AAGATGCTGTTCTCCCACCTTGAGGCCTTTCTTCCAGGTCCTGAGTCCCCTAGGTACCAGAACTTCTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202085.2 |
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| CDS CAA 72 bp | GGGGACTCAGGACCCTCAAGGTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGACTTGTTTGGAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GDSGPSRWENSI*FFLSNDLFGAV Trigger: CACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGGTCCTGAGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000200998.4 |
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| CDS CCA 72 bp | AAGTTCTGGTACCTAGGGGACTCAGGACCCTCAAGGTaGGAGAACAGCATCTTGTTCTTCCTTTCAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: KFWYLGDSGPSR*ENSILFFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGGTCCTGAGTCCCCTAGGTACCAGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036362.13 ENSMUST00000200998.4 |
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| CDS CCA 72 bp | AGGAGTTGGAATCGTCGTCTTCTGAGGGCCTCAAGGTaGGAGAACAGCATCTTGTTCTTCCTTTCAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: RSWNRRLLRASR*ENSILFFLSND Trigger: GTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCCTCAGAAGACGACGATTCCAACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS CAA 72 bp | AGAACAGCATCTTGTTCTTCCTTTCAAATGACTTGTTaGGAGCTGTGTCCATCTGGGGTCCTGGCCACACCT | + |
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Preference number: 6 (lower is better) Translates to: RTASCSSFQMTC*ELCPSGVLATP Trigger: AGGTGTGGCCAGGACCCCAGATGGACACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036362.13 ENSMUST00000077636.8 ENSMUST00000200737.4 ENSMUST00000200998.4 ENSMUST00000202085.2 |
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| CDS CAA 72 bp | CGTCTTCTGAGGGCCTCAAGGTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGACTTGTTTGGAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RLLRASRWENSI*FFLSNDLFGAV Trigger: CACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCCTCAGAAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200737.4 |
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| CDS CAA 72 bp | CCTGGAAGAAAGGCCTCAAGGTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGACTTGTTTGGAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PGRKASRWENSI*FFLSNDLFGAV Trigger: CACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGCCTTTCTTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202085.2 |
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| CDS CAA 72 bp | TCCTGGTTACTTCCCTCAAGGTGGGAGAACAGCATCTaGTTCTTCCTTTCAAATGACTTGTTTGGAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SWLLPSRWENSI*FFLSNDLFGAV Trigger: CACAGCTCCAAACAAGTCATTTGAAAGGAAGAACAAGATGCTGTTCTCCCACCTTGAGGGAAGTAACCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077636.8 |
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