Pregenerated sensors for LASP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038366Ensembl transcript IDs: ENSMUST00000043843.12, ENSMUST00000129558.8, ENSMUST00000129828.8, ENSMUST00000146572.8, ENSMUST00000148280.3, ENSMUST00000152962.8, ENSMUST00000155762.3
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGAAGCCTTCTCCCACCTCCCCAGCGAGGCGGGAGGGCCTCCTaGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PRSLLPPPQRGGRAS*APEDSGHFLAWQSS Trigger: AGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTCGCTGGGGAGGTGGGAGAAGGCTTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 90 bp | GAGGCGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTaGCTTGGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: EAGGPPGLQKTLAIF*LGRALSQSSLVLGK Trigger: CTTCCCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 90 bp | GGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTaGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTGGGGAAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: GRASWAPEDSGHFLA*QSSQPVQPCSGEGR Trigger: CCTTCCTTCCCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 90 bp | TGTTCCTTCCTTTCTGCTGCTGCCCCTAGAACTAAGGCAAGAATCTaGCCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: CSFLSAAAPRTKARI*PKLGFLGRSLATLG Trigger: ACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGTCAGATTCTTGCCTTAGTTCTAGGGGCAGCAGCAGAAAGGAAGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 90 bp | AGCCCAGAGATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTaGTTCAAGGATAGGAGAGCCTCAGGTGAGAGGTACCAACCACAG | + |
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Preference number: 1 (lower is better) Translates to: SPEMVPPALKPWTLL*FKDRRASGERYQPQ Trigger: CTGTGGTTGGTACCTCTCACCTGAGGCTCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 90 bp | GAGTTTAGCACCAGCCCAGAGATGGTGCCGCCAGCTTTGAAGCCCTaGACTCTCCTTTGCTTCAAGGATAGGAGAGCCTCAGGTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EFSTSPEMVPPALKP*TLLCFKDRRASGER Trigger: CCTCTCACCTGAGGCTCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCTGGTGCTAAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 90 bp | GGGAACTTGAGTTTAGCACCAGCCCAGAGATGGTGCCGCCAGCTTTaGAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGAGAGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GNLSLAPAQRWCRQL*SPGLSFASRIGEPQ Trigger: CTGAGGCTCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCTGGTGCTAAACTCAAGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 90 bp | CTAGTTCAGCCCAGCCCTGGGAGTCTACCTAGCTCAGAACAATCCTaGCCTCCCCAGAGTGCCCAGCCTGTTCCATCCAGAGAGAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LVQPSPGSLPSSEQS*PPQSAQPVPSREKN Trigger: ATTTTTCTCTCTGGATGGAACAGGCTGGGCACTCTGGGGAGGGCAGGATTGTTCTGAGCTAGGTAGACTCCCAGGGCTGGGCTGAACTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 90 bp | GGTGTGTGTGGGGGCAGAATGGGCACACTCTGTTATGTGGAGGACTaGACAGAGGGGCAAGGATTCAGTCTGAAGCAGGAACTCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GVCGGRMGTLCYVED*TEGQGFSLKQELCS Trigger: AGAGCAGAGTTCCTGCTTCAGACTGAATCCTTGCCCCTCTGTGCAGTCCTCCACATAACAGAGTGTGCCCATTCTGCCCCCACACACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 90 bp | GGAGGGAGGGGACCAAAGAAAGATGACAACCCGATATATAAAAGATaGGTGGGTGGCTTCTCACACACACACACACGCACACATACTCTC | + |
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Preference number: 1 (lower is better) Translates to: GGRGPKKDDNPIYKR*VGGFSHTHTRTHTL Trigger: GAGAGTATGTGTGCGTGTGTGTGTGTGTGAGAAGCCACCCACTCATCTTTTATATATCGGGTTGTCATCTTTCTTTGGTCCCCTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 90 bp | ACACGCACACATACTCTCTCTCACACACACACATTCATACACAGATaGAATGTTGGACAGAGGCGGACTTCACAGGGTCACTTCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: TRTHTLSHTHTFIHR*NVGQRRTSQGHFCF Trigger: GAAACAGAAGTGACCCTGTGAAGTCCGCCTCTGTCCAACATTTCATCTGTGTATGAATGTGTGTGTGTGAGAGAGAGTATGTGTGCGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGTTCTGGGGAAGGAAGGCCACAGGAGAGACGCGGAGACCTTTTCCCAGGCTGCCCTCCCCAGAGTaGCCAGCCTGTTCCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: ALFWGRKATGETRRPFPRLPSPE*PACSIQ Trigger: CTGGATGGAACAGGCTGGGCACTCTGGGGAGGGCAG...CCTGGGAAAAGGTCTCCGCGTCTCTCCTGTGGCCTTCCTTCCCCAGAACAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CAA 90 bp | CGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTaGGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTGGGGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: REGLLGSRRLWPFSG*AELSASPALFWGRK Trigger: CTTCCTTCCCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGGGGAAGGAAGGCCACAGGAGAGACGCGGAGACCTTTTCCCAGGGAAGCAGAGACACTGAAGGGTaGACGGGTCAGGCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLGKEGHRRDAETFSQGSRDTEG*TGQAPG Trigger: TCCTGGGGCCTGACCCGTCCACCCTTCAGTGTCTCT...GCTTCCCTGGGAAAAGGTCTCCGCGTCTCTCCTGTGGCCTTCCTTCCCCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCCCCCCTGGGGATGTGTaGAGCCACACCTGGAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: GLQKTLAIFWLGRALSQSPPGDV*SHTWRY Trigger: ATACCTCCAGGTGTGGCTCCACACATCCCCAGGGGG...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGCAGAATGGGCACAAGGGTGTTTGCCACTaGACCCAGTCTAAACTGATC | + |
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Preference number: 2 (lower is better) Translates to: ISGALPGHPRCVWGQNGHKGVCH*TQSKLI Trigger: GATCAGTTTAGACTGGGTGCAGTGGCAAACACCCTT...GTGCCCATTCTGCCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCAGATCTGCCTGCCTCTaGCTCCCTTCGCTGGGATTA | + |
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Preference number: 2 (lower is better) Translates to: GLQKTLAIFWLGRALSQSRSACL*LPSLGL Trigger: TAATCCCAGCGAAGGGAGGCAGAGGCAGGCAGATCT...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CAA 90 bp | AGGGAAGCAGGAACAAACAGCTCAGTCAGGCCCCAAAGGCACCCTTaGCTCTACCCTTCACTGCAGGCTCCCAGCCAGGGAGATAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: REAGTNSSVRPQRHP*LYPSLQAPSQGDKE Trigger: CTCTTTATCTCCCTGGCTGGGAGCCTGCAGTGAAGGGTAGAGCAAAGGGTGCCTTTGGGGCCTGACTGAGCTGTTTGTTCCTGCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | GGGATGTGTGGAGCCACACCTGGAGGTATGAGGAGGACACAGCTCACCCCAGCTGGGATTAAGGGTGTTTaGCACTGCACCCAGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: GMCGATPGGMRRTQLTPAGIKGV*HCTQSK Trigger: TTTAGACTGGGTGCAGTGGCAAACACCCTTAATCCC...AGCTGGGGTGAGCTGTGTCCTCCTCATACCTCCAGGTGTGGCTCCACACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGAGAAGTCACAGATCTGCCTaGCTCTGCCTCCCTTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: MVPPALKPWTLLCFKDRRSHRSA*LCLPSL Trigger: CAGCGAAGGGAGGCAGAGGCAGGCAGATCTGTGACT...TCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGGGAGTCTACCTAGCTCAGAACAATCCTGCCCTCCCCAGAGTGCCCAGGGGCAGAACAAGGCTTaGGATGGTAAAATAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SPGSLPSSEQSCPPQSAQGQNKA*DGKISW Trigger: CCAGCTTATTTTACCATCCCAAGCCTTGTTCTGCCC...CTGGGCACTCTGGGGAGGGCAGGATTGTTCTGAGCTAGGTAGACTCCCAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGAGAGGCAAGGATTCAGTCTaGAGCAGGAACTCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: MVPPALKPWTLLCFKDRRGKDSV*SRNSAL Trigger: GAGAGCAGAGTTCCTGCTTCAGACTGAATCCTTGCC...TCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTGGATTGGCTGAAAAGACCTTTACAGAGGAAGAGACTATGGGCTTGGGGCAACCACAGTGTGGGTaGCTCGGCCCTTCTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: GFGLAEKTFTEEETMGLGQPQCG*LGPSGT Trigger: AGTACCAGAAGGGCCGAGTCACCCACACTGTGGTTG...CCCCAAGCCCATAGTCTCTTCCTCTGTAAAGGTCTTTTCAGCCAATCCAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGGAAGAGACTATGGGCTTGGGGGATTCTGTGCTCTTCTAGGGGTAGATAGCTCAGAACAATCCTaGCCTCCCCAGAGTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: YRGRDYGLGGFCALLGVDSSEQS*PPQSAQ Trigger: CTGGGCACTCTGGGGAGGGCAGGATTGTTCTGAGCT...ATCTACCCCTAGAAGAGCACAGAATCCCCCAAGCCCATAGTCTCTTCCTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | TTAGGAAATAAAATGTCCCCGAAGGGACGTGAGGAGGGAGAACAGGAAGCAGCCCTGAAGCAGGAACTCTaGTCTCCTTTGGATGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: LGNKMSPKGREEGEQEAALKQEL*SPLDVP Trigger: CGGGACATCCAAAGGAGAGCAGAGTTCCTGCTTCAG...GGCTGCTTCCTGTTCTCCCTCCTCACGTCCCTTCGGGGACATTTTATTTCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCGAGACAGGGCCTCACTACATAGCTCTGGCTGTCCTGAAACGCACGATGACAGATGTGATGCCATaGAATGCATTGAAGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSETGPHYIALAVLKRTMTDVMP*NALKTG Trigger: CCCTGTCTTCAATGCATTCCATGGCATCACATCTGT...CATCGTGCGTTTCAGGACAGCCAGAGCTATGTAGTGAGGCCCTGTCTCGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCGAAAAATCAATCAGTTaGTTGGTCCAAGGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: GLQKTLAIFWLGRALSQSEKSIS*LVQGKT Trigger: GGTTTTCCCTTGGACCAATCAACTGATTGATTTTTC...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR TCA 90 bp | CAGATGAAATGTTGGACAGAGGCGGACTTCACAGGGTCACTTCTGTTTCTGTTTAAAAGACAGAGACACTaGAGGGTGGACGGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QMKCWTEADFTGSLLFLFKRQRH*RVDGSG Trigger: GCCTGACCCGTCCACCCTTCAGTGTCTCTGTCTTTT...AAACAGAAACAGAAGTGACCCTGTGAAGTCCGCCTCTGTCCAACATTTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTGGATTGGCTGAAAAGACCTTTACAGAGGAAGAGACTATGGGCTTGGGGACTAAGGCAAGAATCTaGCCCAAGCTGGGATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GFGLAEKTFTEEETMGLGTKARI*PKLGFL Trigger: CAGAAATCCCAGCTTGGGTCAGATTCTTGCCTTAGT...CCCCAAGCCCATAGTCTCTTCCTCTGTAAAGGTCTTTTCAGCCAATCCAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR GCA 90 bp | CAGATGAAATGTTGGACAGAGGCGGACTTCACAGGGTCACTTCTGTTTCTGTTTTGTGATGCCATGGAATaGATTGAAGACAGGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: QMKCWTEADFTGSLLFLFCDAME*IEDRAG Trigger: CCCCGCCCTGTCTTCAATGCATTCCATGGCATCACA...AAACAGAAACAGAAGTGACCCTGTGAAGTCCGCCTCTGTCCAACATTTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CCA 90 bp | TACAGAGGAAGAGACTATGGGCTTGGGGGATTCTGTGCTCTTCTAGGGGTAGATAATCAATCAGTTGATTaGTCCAAGGGAAAACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: YRGRDYGLGGFCALLGVDNQSVD*SKGKPA Trigger: GGCAGGTTTTCCCTTGGACCAATCAACTGATTGATT...ATCTACCCCTAGAAGAGCACAGAATCCCCCAAGCCCATAGTCTCTTCCTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 72 bp | GTGGACGGGTCAGGCCCCAGGACAGATGTGATGCCATaGAATGCATTGAAGACAGGGCGGGGCGGCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: VDGSGPRTDVMP*NALKTGRGGTG Trigger: CCCTGTGCCGCCCCGCCCTGTCTTCAATGCATTCCATGGCATCACATCTGTCCTGGGGCCTGACCCGTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CAA 90 bp | CGAGGCGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGTCAGCCAGTCCAGCCTaGTTCTGGGGAAGGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RGGRASWAPEDSGHFLAWSASPA*FWGRKA Trigger: GGCCTTCCTTCCCCAGAACAAGGCTGGACTGGCTGA...CCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 72 bp | GGCTTGGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTaGGGAAGGAAGGCCACAGGAGAGACGCGGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: GLAELSASPALF*GRKATGETRRP Trigger: AGGTCTCCGCGTCTCTCCTGTGGCCTTCCTTCCCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | AGAGCCTCAGGTGAGAGGTACCAACCACAGTGTGGGTaGCTCGGCCCTTCTGGTACTGGGCTCTGTAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: RASGERYQPQCG*LGPSGTGLCSL Trigger: GAGGCTACAGAGCCCAGTACCAGAAGGGCCGAGTCACCCACACTGTGGTTGGTACCTCTCACCTGAGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 72 bp | GAACAAACAGCTCAGTCAGGCCCCAAAGGCACCCTTTaGTCTACCCTTCACTGCAGGCTCCCAGCCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: EQTAQSGPKGTL*STLHCRLPARE Trigger: CTCCCTGGCTGGGAGCCTGCAGTGAAGGGTAGAGCAAAGGGTGCCTTTGGGGCCTGACTGAGCTGTTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 72 bp | GGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTaGCTTGGCAGAGCTCTCAGCCAGTCCAGCCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: GPPGLQKTLAIF*LGRALSQSSLV Trigger: AACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCGAACTCTGCTCTCCTTaGGATGTCCCGAGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PPGLQKTLAIFWLGRALSELCSP*DVPRRQ Trigger: CTGCCTCCTCGGGACATCCAAAGGAGAGCAGAGTTC...GCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | CTTTCTGCTGCTGCCCCTAGAACTAAGGCAAGAATCTaGCCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LSAAAPRTKARI*PKLGFLGRSLA Trigger: GGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGTCAGATTCTTGCCTTAGTTCTAGGGGCAGCAGCAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 72 bp | TCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTaGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SWAPEDSGHFLA*QSSQPVQPCSG Trigger: CCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | GACCCAGGAGGAGGGACAAGAAAACCCAGAGATGAATaGAGCAGAGTGAGTACTGTCCCAGGCCCCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: DPGGGTRKPRDE*SRVSTVPGPRG Trigger: GCCTCTGGGGCCTGGGACAGTACTCACTCTGCTTCATTCATCTCTGGGTTTTCTTGTCCCTCCTCCTGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR CCA 72 bp | ACCAGCCCAGAGATGGTGCCGCCAGCTTTGAAGCCCTaGACTCTCCTTTGCTTCAAGGATAGGAGAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: TSPEMVPPALKP*TLLCFKDRRAS Trigger: TGAGGCTCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 72 bp | ATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTaGTTCAAGGATAGGAGAGCCTCAGGTGAGAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: MVPPALKPWTLL*FKDRRASGERY Trigger: GTACCTCTCACCTGAGGCTCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | AGTTTAGCACCAGCCCAGAGATGGTGCCGCCAGCTTTaGAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGA | + |
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Preference number: 3 (lower is better) Translates to: SLAPAQRWCRQL*SPGLSFASRIG Trigger: TCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCTGGTGCTAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGCAGAATGGGATAAAGAAGCAGTaGAAGATCTTAAAAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: AGISGALPGHPRCVWGQNGIKKQ*KILKDR Trigger: TCTGTCTTTTAAGATCTTCAACTGCTTCTTTATCCC...ATTCTGCCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR GCA 72 bp | AAGAGCAAGCTCCCTCTGGTCCCCAGAACCACATTGTaGTTTGAGATAAGAGGAAATGGAATGGGCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: KSKLPLVPRTTL*FEIRGNGMGWH Trigger: GTGCCAGCCCATTCCATTTCCTCTTATCTCAAAGCACAATGTGGTTCTGGGGACCAGAGGGAGCTTGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | AAAGAAGCAGTTGAAGATCTTAAAAGACAGAGACACTaGAGGGTGGACGGGTCAGGCCCCAGGACAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: KEAVEDLKRQRH*RVDGSGPRTDV Trigger: CACATCTGTCCTGGGGCCTGACCCGTCCACCCTTCAGTGTCTCTGTCTTTTAAGATCTTCAACTGCTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| 3UTR TCA 72 bp | GGACCAAAGAAAGATGACAACCCGATATATAAAAGATaGGTGGGTGGCTTCTCACACACACACACACGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GPKKDDNPIYKR*VGGFSHTHTRT Trigger: TGTGCGTGTGTGTGTGTGTGAGAAGCCACCCACTCATCTTTTATATATCGGGTTGTCATCTTTCTTTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CCA 72 bp | CAAAGAAAGATGACAACCCGATATATAAAAGATGAGTaGGTGGCTTCTCACACACACACACACGCACACATA | + |
|
Preference number: 3 (lower is better) Translates to: QRKMTTRYIKDE*VASHTHTHAHI Trigger: TATGTGTGCGTGTGTGTGTGTGTGAGAAGCCACCCACTCATCTTTTATATATCGGGTTGTCATCTTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGCAGAATGCTGCTGCTGCTCTGTaGGCCTCCGGTAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGISGALPGHPRCVWGQNAAAAL*ASGSCC Trigger: GCAGCAGCTACCGGAGGCCCACAGAGCAGCAGCAGC...ATTCTGCCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | CGAGGCGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGGTCATCTGCTGCTGCTaGGGCTGCTGGTACACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGGRASWAPEDSGHFLAWVICCC*GCWYTG Trigger: CCCCGTGTACCAGCAGCCCCAGCAGCAGCAGATGAC...CCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | CGAGGCGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGGACGAGGTCATCTGCTaGTGCTGGGGCTGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGGRASWAPEDSGHFLAWDEVIC*CWGCWY Trigger: GTACCAGCAGCCCCAGCAGCAGCAGATGACCTCGTC...CCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | ACCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGTATGGAGACAGGGGCTaGTGGCTCCTTGTACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TQAGISGALPGHPRCVWGYGDRG*WLLVPT Trigger: GGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATA...CCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR TCA 90 bp | CGAGGCGGGAGGGCCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGGCTCGCTCTGTTGCTTaGGGCGGAGATTTTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGGRASWAPEDSGHFLAWARSVA*GGDFPE Trigger: CTCCGGAAAATCTCCGCCTCAAGCAACAGAGCGAGC...CCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGGCCCTCCCGCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCGGGCACTGCGCTGTATaGAGACAGGGGCTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQKTLAIFWLGRALSQSGHCAV*RQGLLA Trigger: AGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCC...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | CTAAGGCAAGAATCTGACCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTTTCCCACCGCCACCTaGGGCACTGCGCTGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRQESDPSWDFWGAPWPPFPTAT*GTALYG Trigger: TCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAA...GGGTGGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGTCAGATTCTTGCCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | GGGATGTGTGGAGCCACACCTGGAGGTATGAGGAGGACACAGCTCACCCCAGCTCTCCACGTAGTTGGCTaGCAGCATCCCCGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GMCGATPGGMRRTQLTPALHVVG*QHPRVT Trigger: GGTGACACGGGGATGCTGCCAGCCAACTACGTGGAG...AGCTGGGGTGAGCTGTGTCCTCCTCATACCTCCAGGTGTGGCTCCACACATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGGGAGTCTACCTAGCTCAGAACAATCCTGCCCTCCCCAGAGTGCCCAGCTCCACTGGGCCCCATaGGGCTCTTCTCAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLPSSEQSCPPQSAQLHWAP*GSSQTP Trigger: AGGAGTTTGAGAAGAGCCGCATGGGGCCCAGTGGAG...CTGGGCACTCTGGGGAGGGCAGGATTGTTCTGAGCTAGGTAGACTCCCAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCGAGGTCATCTGCTGCTaGTGGGGCTGCTGGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: GLQKTLAIFWLGRALSQSEVICC*WGCWYT Trigger: CGTGTACCAGCAGCCCCAGCAGCAGCAGATGACCTC...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | GGAACAAACAGCTCAGTCAGGCCCCAAAGGCACCCTTaGCTCTACCCTTCACTGCAGGCTCCCAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTNSSVRPQRHP*LYPSLQAPSQG Trigger: TCCCTGGCTGGGAGCCTGCAGTGAAGGGTAGAGCAAAGGGTGCCTTTGGGGCCTGACTGAGCTGTTTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | TTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCAGCCTaGTTCTGGGGAAGGAAGGCCACAGGAGAGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGLAELSASPA*FWGRKATGETR Trigger: CCGCGTCTCTCCTGTGGCCTTCCTTCCCCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | GAGTACTGTCCCAGGCCCCAGAGGCAAAGAGGGAACTaGAGTTTAGCACCAGCCCAGAGATGGTGCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EYCPRPQRQRGN*SLAPAQRWCRQ Trigger: CTGGCGGCACCATCTCTGGGCTGGTGCTAAACTCAAGTTCCCTCTTTGCCTCTGGGGCCTGGGACAGTACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | GGGATGTGTGGAGCCACACCTGGAGGTATGAGGAGGACACAGCTCACCCCAGCTCAGCTCAGGCGTGTCTaGCACCACGCTGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GMCGATPGGMRRTQLTPAQLRRV*HHAETF Trigger: AAAGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTG...AGCTGGGGTGAGCTGTGTCCTCCTCATACCTCCAGGTGTGGCTCCACACATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCAGTTCACCTTCTCCGTaGGGTACACGATCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLQKTLAIFWLGRALSSSPSP*GTRSCR Trigger: GCGGCAAGATCGTGTACCCCACGGAGAAGGTGAACT...GCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | CTCCTGGGCTCCAGAAGACTCTGGCCATTTTCTGGCTaGGCAGAGCTCTCAGCCAGTCCAGCCTTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSRRLWPFSG*AELSASPALFW Trigger: CCAGAACAAGGCTGGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | ACCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGCTCGCAGTGAAAGCATaGTTTATGCCAGTACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TQAGISGALPGHPRCVWGLAVKA*FMPVLI Trigger: GATAAGTACTGGCATAAAGCATGCTTTCACTGCGAG...CCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTGAAGCTGAGAGCTAACCAACCCCCACTCTTCCTCCGAGACAGGGCCGTCTTCTTGATTCTCTaGAGCTCAGGCGTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEVKLRANQPPLFLRDRAVFLIL*SSGVSA Trigger: GGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGAC...GGCCCTGTCTCGGAGGAAGAGTGGGGGTTGGTTAGCTCTCAGCTTCACTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCCCGTCATCGATCTGCTaGACATTGACGATGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQKTLAIFWLGRALSQSPSSIC*TLTMVS Trigger: GGACACCATCGTCAATGTGCAGCAGATCGATGACGG...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCAGAAGACTCTGGCCATTTTCTGGCTTGGCAGAGCTCTCAGCCAGTCCTTGCAGGTCTCGCAGTaGAAGCATGCTTTATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLQKTLAIFWLGRALSQSLQVSQ*KHALCQ Trigger: CTGGCATAAAGCATGCTTTCACTGCGAGACCTGCAA...GGACTGGCTGAGAGCTCTGCCAAGCCAGAAAATGGCCAGAGTCTTCTGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAGGAAGAGACTATGGGCTTGGGGGATTCTGTGCTCTTCTAGGGGTAGATGGCTTCTCGGCGCTCTaGTTCCACCCCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRGRDYGLGGFCALLGVDGFSAL*FHPFSS Trigger: GGAGGAGAAGGGGTGGAACCAGAGCGCCGAGAAGCC...ATCTACCCCTAGAAGAGCACAGAATCCCCCAAGCCCATAGTCTCTTCCTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | GAGTTTAGCACCAGCCCAGAGATGGTGCCGCCAGCTTaGAAGCCCTGGACTCTCCTTTGCTTCAAGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSTSPEMVPPA*KPWTLLCFKDR Trigger: CCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCATCTCTGGGCTGGTGCTAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | CAGATGAAATGTTGGACAGAGGCGGACTTCACAGGGTCACTTCTGTTTCTGTTTCGCCACCTGGGGCACTaGGCTGTATGGAGACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMKCWTEADFTGSLLFLFRHLGH*AVWRQG Trigger: CCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCG...AAACAGAAACAGAAGTGACCCTGTGAAGTCCGCCTCTGTCCAACATTTCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGAGACAGCCGTCATCGATCTaGTGCACATTGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVPPALKPWTLLCFKDRRQPSSI*CTLTMV Trigger: CACCATCGTCAATGTGCAGCAGATCGATGACGGCTG...TCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | ACCCAAGCTGGGATTTCTGGGGCGCTCCCTGGCCACCCTAGGTGTGTGTGGGGGTTCTCAAACTCCTCATaGTATTTGATATTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TQAGISGALPGHPRCVWGFSNSS*YLILLI Trigger: GATCAGCAATATCAAATACCATGAGGAGTTTGAGAA...CCCCCACACACACCTAGGGTGGCCAGGGAGCGCCCCAGAAATCCCAGCTTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAGGAAGAGACTATGGGCTTGGGGGATTCTGTGCTCTTCTAGGGGTAGATATGGTGTCCCCATCCTaGAAGGAGACCTCGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YRGRDYGLGGFCALLGVDMVSPS*KETSSS Trigger: CGAGGACGAGGTCTCCTTCCAGGATGGGGACACCAT...ATCTACCCCTAGAAGAGCACAGAATCCCCCAAGCCCATAGTCTCTTCCTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | GCGGACTTCACAGGGTCACTTCTGTTTCTGTTTAAATATAGGCTCTGTGGGGTGTGGCCTCCACGTAGTTaGCTGGCAGCATCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADFTGSLLFLFKYRLCGVWPPRS*LAASPC Trigger: ACACGGGGATGCTGCCAGCCAACTACGTGGAGGCCA...CACCCCACAGAGCCTATATTTAAACAGAAACAGAAGTGACCCTGTGAAGTCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| 3UTR CAA 72 bp | CAAGGATTCAGTCTGAAGCAGGAACTCTGCTCTCCTTaGGATGTCCCGAGGAGGCAGAGAGTCAGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGFSLKQELCSP*DVPRRQRVRKM Trigger: CATCTTCCTGACTCTCTGCCTCCTCGGGACATCCAAAGGAGAGCAGAGTTCCTGCTTCAGACTGAATCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CCA 90 bp | ATGGTGCCGCCAGCTTTGAAGCCCTGGACTCTCCTTTGCTTCAAGGATAGGAGATTGCTGATCTGGTCCTaGGTCTTCTTGATTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVPPALKPWTLLCFKDRRLLIWS*VFLILC Trigger: GCAGAGAATCAAGAAGACCCAGGACCAGATCAGCAA...TCTCCTATCCTTGAAGCAAAGGAGAGTCCAGGGCTTCAAAGCTGGCGGCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR TCA 90 bp | GCGGACTTCACAGGGTCACTTCTGTTTCTGTTTAAATATAGGCTCTGTGGGGTGTGTCTGCCACCACGCTaGAACCTTTGCCCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADFTGSLLFLFKYRLCGVCLPPR*NLCPYS Trigger: AGAATAAGGGCAAAGGTTTCAGCGTGGTGGCAGACA...CACCCCACAGAGCCTATATTTAAACAGAAACAGAAGTGACCCTGTGAAGTCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR TCA 90 bp | AGCCTGTTCCATCCAGAGAGAAAAATCAATCAGTTGATTGGTCCAAGGGAAAACCGATCTGCTGCACATTaGCGATGGTGTCCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFHPERKINQLIGPRENRSAAH*RWCPHP Trigger: AGGATGGGGACACCATCGTCAATGTGCAGCAGATCG...GTTTTCCCTTGGACCAATCAACTGATTGATTTTTCTCTCTGGATGGAACAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS GCA 90 bp | GGTGAGGCTGCGGCTGCTGCTGCTCTGTGGGCCTCCGGTAGCTGCTaGTGTCCTGGGCTTCTCGGCGCTCTGGTTCCACCCCTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEAAAAAALWASGSC*CPGLLGALVPPLLL Trigger: GAGGAGAAGGGGTGGAACCAGAGCGCCGAGAAGCCCAGGACAGCAGCAGCTACCGGAGGCCCACAGAGCAGCAGCAGCCGCAGCCTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043843.12 ENSMUST00000129828.8 ENSMUST00000148280.3 |
||
| CDS GCA 90 bp | TATGGTGAGGCTGCGGCTGCTGCTGCTCTGTGGGCCTCCGGTAGCTaGTGCTGTCCTGGGCTTCTCGGCGCTCTGGTTCCACCCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YGEAAAAAALWASGS*CCPGLLGALVPPLL Trigger: GAGAAGGGGTGGAACCAGAGCGCCGAGAAGCCCAGGACAGCAGCAGCTACCGGAGGCCCACAGAGCAGCAGCAGCCGCAGCCTCACCATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
||
| CDS CCA 90 bp | CCCACCGCCACCTGGGGCACTGCGCTGTATGGAGACAGGGGCTGCTaGCTCCTTGTACCCACCATAGGACGAGGTCATCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTATWGTALYGDRGC*LLVPTIGRGHLLLL Trigger: CAGCAGCAGCAGATGACCTCGTCCTATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
||
| CDS CCA 90 bp | CTGCACGGTACCGTTTCCCACCGCCACCTGGGGCACTGCGCTGTATaGAGACAGGGGCTGCTGGCTCCTTGTACCCACCATAGGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHGTVSHRHLGHCAV*RQGLLAPCTHHRTR Trigger: CCTCGTCCTATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAACGGTACCGTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
||
| CDS GCA 90 bp | TTTCCCACCGCCACCTGGGGCACTGCGCTGTATGGAGACAGGGGCTaGTGGCTCCTTGTACCCACCATAGGACGAGGTCATCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPTATWGTALYGDRG*WLLVPTIGRGHLLL Trigger: CAGCAGCAGATGACCTCGTCCTATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
||
| CDS GCA 90 bp | AGTCATACACTGCACGGTACCGTTTCCCACCGCCACCTGGGGCACTaGGCTGTATGGAGACAGGGGCTGCTGGCTCCTTGTACCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHTLHGTVSHRHLGH*AVWRQGLLAPCTHH Trigger: ATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAACGGTACCGTGCAGTGTATGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
||
| CDS-3UTR CAA 90 bp | CTGGCCACCCTAGGTGTGTGTGGGGGCAGAATGGGCACACTCTGTTATGTGGAGTCGATCTGCTGCACATaGACGATGGTGTCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LATLGVCGGRMGTLCYVESICCT*TMVSPS Trigger: GGATGGGGACACCATCGTCAATGTGCAGCAGATCGA...CTCCACATAACAGAGTGTGCCCATTCTGCCCCCACACACACCTAGGGTGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTGCTGCTGCCCCTAGAACTAAGGCAAGAATCTGACCCAAGCTGGGATGTGGGGTACACGATCTaGCCGCACCGGGCACAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFLLLPLELRQESDPSWDVGYTI*PHRAQL Trigger: TAACTGTGCCCGGTGCGGCAAGATCGTGTACCCCAC...ATCCCAGCTTGGGTCAGATTCTTGCCTTAGTTCTAGGGGCAGCAGCAGAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS GCA 90 bp | GATCTGGTCCTGGGTCTTCTTGATTCTCTGCAGCTCAGGCGTGTCTaGCACCACGCTGAAACCTTTGCCCTTATTCTTCTCAAATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLVLGLLDSLQLRRV*HHAETFALILLKFL Trigger: GAGGAATTTGAGAAGAATAAGGGCAAAGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAGGACCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000146572.8 ENSMUST00000148280.3 ENSMUST00000152962.8 ENSMUST00000155762.3 |
||
| CDS GCA 90 bp | TGGTATTTGATATTGCTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCAGGCGTGTCTGCCACCACGCTGAAACCTTTGCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WYLILLIWSWVFLIL*SSGVSATTLKPLPL Trigger: TAAGGGCAAAGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAGGACCAGATCAGCAATATCAAATACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000146572.8 ENSMUST00000148280.3 ENSMUST00000152962.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTGCTGCTGCCCCTAGAACTAAGGCAAGAATCTGACCCAAGCTGGGATAACTCCTCATGGTATTaGATATTGCTGATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLLLPLELRQESDPSWDNSSWY*ILLIWS Trigger: GGACCAGATCAGCAATATCAAATACCATGAGGAGTT...ATCCCAGCTTGGGTCAGATTCTTGCCTTAGTTCTAGGGGCAGCAGCAGAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS GCA 90 bp | GCTTCTTCTCATAACCCTTGTAGTTCTTCATGTTCAGGGTCATCTTaGAGGTCTCGCAGTGAAAGCATGCTTTATGCCAGTACTTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSHNPCSSSCSGSS*RSRSESMLYASTYP Trigger: TGGATAAGTACTGGCATAAAGCATGCTTTCACTGCGAGACCTGCAAGATGACCCTGAACATGAAGAACTACAAGGGTTATGAGAAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
||
| CDS TCA 72 bp | GGCTGCTGGTACACGGGGGCACTGGTCGGGATATGGTaGGGCTGCGGCTGCTGCTGCTCTGTGGGCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GCWYTGALVGIW*GCGCCCSVGLR Trigger: CCGGAGGCCCACAGAGCAGCAGCAGCCGCAGCCTCACCATATCCCGACCAGTGCCCCCGTGTACCAGCAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | GCGGCTGCTGCTGCTCTGTGGGCCTCCGGTAGCTGCTaGTGTCCTGGGCTTCTCGGCGCTCTGGTTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: AAAAALWASGSC*CPGLLGALVPP Trigger: GGGTGGAACCAGAGCGCCGAGAAGCCCAGGACAGCAGCAGCTACCGGAGGCCCACAGAGCAGCAGCAGCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043843.12 ENSMUST00000129828.8 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | GCTGCGGCTGCTGCTGCTCTGTGGGCCTCCGGTAGCTaGTGCTGTCCTGGGCTTCTCGGCGCTCTGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAAAAALWASGS*CCPGLLGALVP Trigger: TGGAACCAGAGCGCCGAGAAGCCCAGGACAGCAGCAGCTACCGGAGGCCCACAGAGCAGCAGCAGCCGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043843.12 ENSMUST00000129828.8 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | CTGCACGGTACCGTTTCCCACCGCCACCTGGGGCACTaGGCTGTATGGAGACAGGGGCTGCTGGCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LHGTVSHRHLGH*AVWRQGLLAPC Trigger: ACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAACGGTACCGTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | GACCTCGTCCTCGTCGGCAGCGCTGTAGTCATACACTaGACGGTACCGTTTCCCACCGCCACCTGGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: DLVLVGSAVVIH*TVPFPTATWGT Trigger: AGTGCCCCAGGTGGCGGTGGGAAACGGTACCGTGCAGTGTATGACTACAGCGCTGCCGACGAGGACGAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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| CDS CCA 72 bp | GTCATACACTGCACGGTACCGTTTCCCACCGCCACCTaGGGCACTGCGCTGTATGGAGACAGGGGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VIHCTVPFPTAT*GTALYGDRGCW Trigger: CCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGCGGTGGGAAACGGTACCGTGCAGTGTATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | GCCACCTGGGGCACTGCGCTGTATGGAGACAGGGGCTaGTGGCTCCTTGTACCCACCATAGGACGAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: ATWGTALYGDRG*WLLVPTIGRGH Trigger: ATGACCTCGTCCTATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
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| CDS CCA 72 bp | ACCTGGGGCACTGCGCTGTATGGAGACAGGGGCTGCTaGCTCCTTGTACCCACCATAGGACGAGGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TWGTALYGDRGC*LLVPTIGRGHL Trigger: CAGATGACCTCGTCCTATGGTGGGTACAAGGAGCCAGCAGCCCCTGTCTCCATACAGCGCAGTGCCCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043843.12 ENSMUST00000148280.3 |
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| CDS GCA 72 bp | CTGGGTCTTCTTGATTCTCTGCAGCTCAGGCGTGTCTaGCACCACGCTGAAACCTTTGCCCTTATTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGLLDSLQLRRV*HHAETFALILL Trigger: GAGAAGAATAAGGGCAAAGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000146572.8 ENSMUST00000148280.3 ENSMUST00000152962.8 ENSMUST00000155762.3 |
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| CDS GCA 72 bp | ATATTGCTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCAGGCGTGTCTGCCACCACGCTGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: ILLIWSWVFLIL*SSGVSATTLKP Trigger: AGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAGGACCAGATCAGCAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000146572.8 ENSMUST00000148280.3 ENSMUST00000152962.8 |
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| CDS CAA 90 bp | AACTCCTCATGGTATTTGATATTGCTGATCTGGTCCTGGGTCTTCTaGATTCTCTGCAGCTCAGGCGTGTCTGCCACCACGCTGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: NSSWYLILLIWSWVF*ILCSSGVSATTLKP Trigger: AGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAGGACCAGATCAGCAATATCAAATACCATGAGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000148280.3 ENSMUST00000152962.8 |
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| CDS CCA 72 bp | AACTCCTCATGGTATTTGATATTGCTGATCTGGTCCTaGGTCTTCTTGATTCTCTGCAGCTCAGGCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: NSSWYLILLIWS*VFLILCSSGVS Trigger: AGACACGCCTGAGCTGCAGAGAATCAAGAAGACCCAGGACCAGATCAGCAATATCAAATACCATGAGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043843.12 ENSMUST00000129558.8 ENSMUST00000129828.8 ENSMUST00000148280.3 ENSMUST00000152962.8 |
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| CDS TCA 72 bp | TTCTTCATGTTCAGGGTCATCTTGCAGGTCTCGCAGTaGAAGCATGCTTTATGCCAGTACTTATCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: FFMFRVILQVSQ*KHALCQYLSRQ Trigger: CTGTCTGGATAAGTACTGGCATAAAGCATGCTTTCACTGCGAGACCTGCAAGATGACCCTGAACATGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043843.12 |
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