Pregenerated sensors for LARP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023025Ensembl transcript IDs: ENSMUST00000057632.16, ENSMUST00000100206.4, ENSMUST00000230521.2, ENSMUST00000230956.2, ENSMUST00000231160.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGTGAGAGGTAGAGCCCTGGATGGACTGGGACTGAGATCCACCTaGCACACCTCTGGAGGCCAGGGTTGGAGATTTATGCCCGCACAG | + |
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Preference number: 1 (lower is better) Translates to: LVRGRALDGLGLRST*HTSGGQGWRFMPAQ Trigger: CTGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGGGCTCTACCTCTCACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR GCA 90 bp | AGCAAGCAAATCAAACTTCGGAGTTGGAGCCTTGGCTTCAGTTGCTaGAGGTTGGGGTCTTGGGATCCTGTCATCATCCCTTCGCCTTCG | + |
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Preference number: 1 (lower is better) Translates to: SKQIKLRSWSLGFSC*RLGSWDPVIIPSPS Trigger: CGAAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGATTTGCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR TCA 90 bp | ATGGCTTTGTGGCAGTTGGAGAAGACACTGGCACAGCTACTGGGTTaGGAGTGTCCTTTGGAACAGCAGAGTCCTCCATCTGATCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: MALWQLEKTLAQLLG*ECPLEQQSPPSDPA Trigger: AGCAGGATCAGATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR GCA 90 bp | TGTAGCAAGCAAATCAAACTTCGGAGTTGGAGCCTTGGCTTCAGTTaGTGCAGGTTGGGGTCTTGGGATCCTGTCATCATCCCTTCGCCT | + |
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Preference number: 1 (lower is better) Translates to: CSKQIKLRSWSLGFS*CRLGSWDPVIIPSP Trigger: AGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGATTTGCTTGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR CCA 90 bp | AGTTGGAGAAGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTaGAACAGCAGAGTCCTCCATCTGATCCTGCTCTTGCTGAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: SWRRHWHSYWVESVL*NSRVLHLILLLLSR Trigger: ACGACTCAGCAAGAGCAGGATCAGATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGGGGAAGAGAAGCTTCTaGGTAGTTTTTGTAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWGKRSF*VVFVGF Trigger: AAAGCCTACAAAAACTACTCAGAAGCTTCTCTTCCC...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGTCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GEDTGTATGLRVSFGTAESVAAG*GLGILS Trigger: TGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA...CTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR TCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTGGGAAGAGAAGCTTCTaGGTAGTTTTTGTAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFGKRSF*VVFVGF Trigger: AAAGCCTACAAAAACTACTCAGAAGCTTCTCTTCCC...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTTTAGAGATGAATTTTaGGCTCTTCCTACTCGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWFRDEF*ALPTRN Trigger: ATTGCGAGTAGGAAGAGCCCAAAATTCATCTCTAAA...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGATACAAATAAATTACTaGCAGGTCAGTACCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWIQINY*QVSTIL Trigger: CAGGATGGTACTGACCTGCCAGTAATTTATTTGTAT...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR GCA 90 bp | AGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGTCCTCGATGGCTTTTATCCTTaGCATGATTGGCTTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RHWHSYWVESVLWNSRVLDGFYP*HDWLAL Trigger: CAGGGCAAGCCAATCATGGCAAGGATAAAAGCCATC...GAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGGAGTTGGAGCCTTGGCTTCAGTTGCTGCAGGTTGGGGTCTTGGGATCCTGGTTCCATCTGTAAAATaGGAGCCTCCTTTGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FGVGALASVAAGWGLGILVPSVK*EPPLED Trigger: ATCTTCCAAAGGAGGCTCCCATTTTACAGATGGAAC...CAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGGAGTTGGAGCCTTGGCTTCAGTTGCTGCAGGTTGGGGTCTTGGGATCCTGAAGTATTTAAAAGCCTaGTGTGCATCTGTGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: FGVGALASVAAGWGLGILKYLKA*CASVSD Trigger: GTCAGACACAGATGCACAGCAGGCTTTTAAATACTT...CAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTTTTAGAGATGAATTTTaGGCTCTTCCTACTCGCAAT | + |
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Preference number: 2 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFFRDEF*ALPTRN Trigger: ATTGCGAGTAGGAAGAGCCCAAAATTCATCTCTAAA...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCCTTTGGAAGATAAGTTTGTTCCTGCTGCCCTGTTACTGTTGGGTTATGTTGCATGAAGACTGGTaGGGGATATTGGGTAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SLLWKISLFLLPCYCWVMLHEDW*GILGRS Trigger: ACTCCTACCCAATATCCCTCACCAGTCTTCATGCAA...CATAACCCAACAGTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAGGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATGGATGGACTGGGACTaGGATCCACCTGCCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: RDSSYYCKLSLRKINHPTWMDWD*DPPATP Trigger: AGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAACCCACCCAATTGACTTaGGTAATGATGATGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: YCQHKHQELNPSAVQLCQPTQLT*VMMMGK Trigger: TTTCCCCATCATCATTACTCAAGTCAATTGGGTGGG...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR-3UTR TCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAACATGATGAACTTGTGTaGGTTCTGCTCTCTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: YCQHKHQELNPSAVQLCQHDELV*VLLSSC Trigger: GCATGAAGAGAGCAGAACTCACACAAGTTCATCATG...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATCTGGAGGCCAGGGTTaGAGATTTATGCCCGCACAG | + |
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Preference number: 2 (lower is better) Translates to: RDSSYYCKLSLRKINHPTSGGQG*RFMPAQ Trigger: CTGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAAATCATTTACACACGCTaGAATAAAATAACGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: YCQHKHQELNPSAVQLCQIIYTR*NKITAK Trigger: TTTGGCCGTTATTTTATTGCAGCGTGTGTAAATGAT...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAGGGAAGAGAAGCTTCTaGGTAGTTTTTGTAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RDSSYYCKLSLRKINHPTGKRSF*VVFVGF Trigger: AAAGCCTACAAAAACTACTCAGAAGCTTCTCTTCCC...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAATACAAATAAATTACTaGCAGGTCAGTACCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: RDSSYYCKLSLRKINHPTIQINY*QVSTIL Trigger: CAGGATGGTACTGACCTGCCAGTAATTTATTTGTAT...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR CCA 72 bp | GGATGGACTGGGACTGAGATCCACCTGCCACACCTCTaGAGGCCAGGGTTGGAGATTTATGCCCGCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: GWTGTEIHLPHL*RPGLEIYARTA Trigger: GGCTGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR GCA 72 bp | GGTAGAGCCCTGGATGGACTGGGACTGAGATCCACCTaGCACACCTCTGGAGGCCAGGGTTGGAGATTTATG | + |
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Preference number: 3 (lower is better) Translates to: GRALDGLGLRST*HTSGGQGWRFM Trigger: CATAAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGGGCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR CCA 72 bp | TGGAGCCTTGGCTTCAGTTGCTGCAGGTTGGGGTCTTaGGATCCTGTCATCATCCCTTCGCCTTCGGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: WSLGFSCCRLGS*DPVIIPSPSAS Trigger: AGAGGCCGAAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTGGCTTAAATCACTTTaGCACACACTCGGACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWWLKSL*HTLGPR Trigger: TCTGGGTCCGAGTGTGTGCAAAAGTGATTTAAGCCA...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATGGCTTAAATCACTTTaGCACACACTCGGACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRWLKSL*HTLGPR Trigger: TCTGGGTCCGAGTGTGTGCAAAAGTGATTTAAGCCA...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR-3UTR CAA 90 bp | AGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGTCCTCGAGCCTTGGCTTCAGTaGCTGCAGGTTGGGGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RHWHSYWVESVLWNSRVLEPWLQ*LQVGVL Trigger: CAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTC...GAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR TCA 72 bp | TTGGGATCCTGTCATCATCCCTTCGCCTTCGGCCTCTaGAGAGAGTTCGCCTGCCTCTTCCAAAGTCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: LGSCHHPFAFGL*REFACLFQSPH Trigger: ATGGGGACTTTGGAAGAGGCAGGCGAACTCTCTTCAGAGGCCGAAGGCGAAGGGATGATGACAGGATCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR CCA 72 bp | CTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTaGAGATTTATGCCCGCACAGCCAGAAGCACTATTT | + |
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Preference number: 3 (lower is better) Translates to: LRSTCHTSGGQG*RFMPAQPEALF Trigger: AAATAGTGCTTCTGGCTGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR CCA 72 bp | TTCGGAGTTGGAGCCTTGGCTTCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCATCATCCCTTCGCCTT | + |
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Preference number: 3 (lower is better) Translates to: FGVGALASVAAG*GLGILSSSLRL Trigger: AAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTTGGGGTCTTGGGATCCTGTCATCATCCCTTCGCCTTCGGCCTCTGAAGCTTTGGAAGATAAGTTaGTTCCTGCTGCCCTGTTAC | + |
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Preference number: 3 (lower is better) Translates to: AGWGLGILSSSLRLRPLKLWKIS*FLLPCY Trigger: GTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAG...CTTCAGAGGCCGAAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR GCA 72 bp | ATCAAACTTCGGAGTTGGAGCCTTGGCTTCAGTTGCTaGAGGTTGGGGTCTTGGGATCCTGTCATCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: IKLRSWSLGFSC*RLGSWDPVIIP Trigger: AGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR CCA 72 bp | AGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTaGAACAGCAGAGTCCTCCATCTGATCCTGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RHWHSYWVESVL*NSRVLHLILLL Trigger: CAAGAGCAGGATCAGATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CAA 90 bp | AGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGTCCTCGCTGCCCTGTTACTGTaGGGTTATGCCGTTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: RHWHSYWVESVLWNSRVLAALLL*GYAVQK Trigger: TTTCTGAACGGCATAACCCAACAGTAACAGGGCAGC...GAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR-3UTR CAA 90 bp | AGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGTCCTCATGTACCAGTTGCTGTaGTGCGCAAACTCACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: RHWHSYWVESVLWNSRVLMYQLL*CANSQL Trigger: AAGCTGTGAGTTTGCGCACAACAGCAACTGGTACAT...GAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR GCA 72 bp | CAAATCAAACTTCGGAGTTGGAGCCTTGGCTTCAGTTaGTGCAGGTTGGGGTCTTGGGATCCTGTCATCATC | + |
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Preference number: 3 (lower is better) Translates to: QIKLRSWSLGFS*CRLGSWDPVII Trigger: GATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
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| 3UTR GCA 72 bp | GGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTaGTGGACCCAAAGACCGAGGCCAGGGAACTTGACA | + |
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Preference number: 3 (lower is better) Translates to: GFIGKLLLDRQV*WTQRPRPGNLT Trigger: TGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| 3UTR CCA 72 bp | TTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTaGACCCAAAGACCGAGGCCAGGGAACTTGACACGG | + |
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Preference number: 3 (lower is better) Translates to: FIGKLLLDRQVC*TQRPRPGNLTR Trigger: CCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| 3UTR GCA 72 bp | GTGAGTTCTGCTCTCTTCATGCAGTGGGAACCACGATaGACTACTGTAGGACACAATAAGCATCACGTTATC | + |
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Preference number: 3 (lower is better) Translates to: VSSALFMQWEPR*TTVGHNKHHVI Trigger: GATAACGTGATGCTTATTGTGTCCTACAGTAGTGCATCGTGGTTCCCACTGCATGAAGAGAGCAGAACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACTCTGGAGGCCAGGGTaGGAGATTTATGCCCGCACA | + |
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Preference number: 3 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLWRPG*EIYART Trigger: TGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGAG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR GCA 72 bp | AGACTAGATATCATCAAGACAGAGATGAGAAGGTTTTaGCATGCCAGCCCCTCTAAGCACCTTCTCTATGAA | + |
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Preference number: 3 (lower is better) Translates to: RLDIIKTEMRRF*HASPSKHLLYE Trigger: TTCATAGAGAAGGTGCTTAGAGGGGCTGGCATGGCAAAACCTTCTCATCTCTGTCTTGATGATATCTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATGGCTTAAATCACTTTaGCACACACTCGGACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RDSSYYCKLSLRKINHPTWLKSL*HTLGPR Trigger: TCTGGGTCCGAGTGTGTGCAAAAGTGATTTAAGCCA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| 3UTR GCA 72 bp | TGTGGGTATCTCTTTACATTTCTAATCACTGTTCTGTaGTATAGAACTGAAAACAGAATACTTGGCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: CGYLFTFLITVL*YRTENRILGPQ Trigger: CTGTGGGCCAAGTATTCTGTTTTCAGTTCTATAGCACAGAACAGTGATTAGAAATGTAAAGAGATACCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| 3UTR TCA 72 bp | TTTAAAATTCCCCCATCTACAGAACCAATAAATAGTTaGAGTACAATGAACACCCACCCAATTGACTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: FKIPPSTEPINS*STMNTHPIDLS Trigger: ACTCAAGTCAATTGGGTGGGTGTTCATTGTACTTCAACTATTTATTGGTTCTGTAGATGGGGGAATTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| CDS-3UTR TCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGGTATGGCCCTCAGGGTaGGATCCAGATGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWVWPSG*DPDVAA Trigger: TGCAGCCACATCTGGATCTCACCCTGAGGGCCATAC...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTCCTCTGCAGGCACTaGGCAACTAACTCGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLVLCRH*ATNSHV Trigger: GACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGAC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAGTATGGCCCTCAGGGTaGGATCCAGATGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRVWPSG*DPDVAA Trigger: TGCAGCCACATCTGGATCTCACCCTGAGGGCCATAC...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAGTCCTCTGCAGGCACTaGGCAACTAACTCGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRVLCRH*ATNSHV Trigger: GACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGAC...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGTCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLSVAAG*GLGILS Trigger: TGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGCACTGGCACAGCTACTaGGTTGAGAGTGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWHWHSY*VESVLW Trigger: CCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTG...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGTGGCTTTGTGGCAGTTaGAGAAGACACTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLWLCGS*RRHWHS Trigger: GCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCA...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGACGTGTTTGCCGGGGATaGCTTTGTGGCAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRRVCRG*LCGSWR Trigger: TCTCCAACTGCCACAAAGCCATCCCCGGCAAACACG...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRSVAAG*GLGILS Trigger: TGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGTTGGAGAAGACACTaGCACAGCTACTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWSWRRH*HSYWVE Trigger: CTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACT...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGAGTTGGAGAAGACACTaGCACAGCTACTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLSWRRH*HSYWVE Trigger: CTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATGGCTTTGTGGCAGTTaGAGAAGACACTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRWLCGS*RRHWHS Trigger: GCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCA...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| 3UTR CAA 72 bp | TTGGAGCCTTGGCTTCAGTTGCTGCAGGTTGGGGTCTaGGGATCCTGTCATCATCCCTTCGCCTTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEPWLQLLQVGV*GSCHHPFAFGL Trigger: GAGGCCGAAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTTCAGTTACAGGAGTaGCATCCGGATTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLVQLQE*HPDFQK Trigger: CTTCTGGAAATCCGGATGGCACTCCTGTAACTGAAC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTGGCTGCAGTTTCATaGCAAGAGGGTTCAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLVAAVS*QEGSVT Trigger: TGTAACTGAACCCTCTTGGCATGAAACTGCAGCCAC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTTCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFSVAAG*GLGILS Trigger: TGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTTGAGAGTGTCCTTTaGAACAGCAGAGTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLVESVL*NSRVLH Trigger: ATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAAC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTTGGCTTTGTGGCAGTTaGAGAAGACACTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFWLCGS*RRHWHS Trigger: GCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCA...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAACGTGTTTGCCGGGGATaGCTTTGTGGCAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QASLLDPKTEARELDTGKRVCRG*LCGSWR Trigger: TCTCCAACTGCCACAAAGCCATCCCCGGCAAACACG...TTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGACACTGGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAACAGCAGAGGTATGGCCCTCAGGGTaGGATCCAGATGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEDTGTATGLRVSFGTAEVWPSG*DPDVAA Trigger: TGCAGCCACATCTGGATCTCACCCTGAGGGCCATAC...CTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
||
| CDS-3UTR GCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAGATGGCTTTTATCCTTaGCATGATTGGCTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRDGFYP*HDWLAL Trigger: CAGGGCAAGCCAATCATGGCAAGGATAAAAGCCATC...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAAGTCCTCTGCAGGCACTaGGCAACTAACTCGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAALRQASLLDPKTEAREVLCRH*ATNSHV Trigger: GACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGAC...TTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAGTTGAGAGTGTCCTTTaGAACAGCAGAGTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRVESVL*NSRVLH Trigger: ATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAAC...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| 3UTR CAA 72 bp | ACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTaGGAGATTTATGCCCGCACAGCCAGAAGCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: TEIHLPHLWRPG*EIYARTARSTI Trigger: AATAGTGCTTCTGGCTGTGCGGGCATAAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGAGAAAGAAAGATCCTTaGACTAGATCTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLRKKDP*TRSAQW Trigger: CCACTGAGCAGATCTAGTTCAAGGATCTTTCTTTCT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAAAGAAAGATCCTTaGACTAGATCTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWRKKDP*TRSAQW Trigger: CCACTGAGCAGATCTAGTTCAAGGATCTTTCTTTCT...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTGTGGCTGCAGTTTCATaGCAAGAGGGTTCAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFVAAVS*QEGSVT Trigger: TGTAACTGAACCCTCTTGGCATGAAACTGCAGCCAC...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR GCA 90 bp | AGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGGATGGCTTTTATCCTTaGCATGATTGGCTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQASLLDPKTEARELDTGDGFYP*HDWLAL Trigger: CAGGGCAAGCCAATCATGGCAAGGATAAAAGCCATC...CCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTGATGGCTTTTATCCTTaGCATGATTGGCTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFDGFYP*HDWLAL Trigger: CAGGGCAAGCCAATCATGGCAAGGATAAAAGCCATC...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGACATCGCTTATGACTTaGTCTCACCTTTTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLTSLMT*SHLFSL Trigger: AAGGGAGAAAAGGTGAGACCAAGTCATAAGCGATGT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTCTGCCCTGTTACTGTTaGGTTATGCCGTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFLPCYC*VMPFRK Trigger: CTTTCTGAACGGCATAACCCAACAGTAACAGGGCAG...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGAATGGGAGCCTCCTTTaGAAGATAAGTTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLNGSLL*KISLFL Trigger: CAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGGTTCCATCTGTAAAATaGGAGCCTCCTTTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWVPSVK*EPPLED Trigger: ATCTTCCAAAGGAGGCTCCCATTTTACAGATGGAAC...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGTTCCATCTGTAAAATaGGAGCCTCCTTTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLVPSVK*EPPLED Trigger: ATCTTCCAAAGGAGGCTCCCATTTTACAGATGGAAC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| 3UTR CAA 72 bp | GTGGCAGTTGGAGAAGACACTGGCACAGCTACTGGGTaGAGAGTGTCCTTTGGAACAGCAGAGTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VAVGEDTGTATG*RVSFGTAESSI Trigger: GATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
||
| CDS-3UTR TCA 90 bp | CGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGTATGGCCCTCAGGGTaGGATCCAGATGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVYWKAALRQASLLDPKTVWPSG*DPDVAA Trigger: TGCAGCCACATCTGGATCTCACCCTGAGGGCCATAC...GGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR TCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGACAATACATCGCTTATaGCTTGGTCTCACCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWTIHRL*LGLTFS Trigger: AGAAAAGGTGAGACCAAGTCATAAGCGATGTATTGT...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAAGTATTTAAAAGCCTaGTGTGCATCTGTGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWKYLKA*CASVSD Trigger: GTCAGACACAGATGCACAGCAGGCTTTTAAATACTT...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAACATCGCTTATGACTTaGTCTCACCTTTTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRTSLMT*SHLFSL Trigger: AAGGGAGAAAAGGTGAGACCAAGTCATAAGCGATGT...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| 3UTR CAA 72 bp | CGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTaGCTGGACCCAAAGACCGAGGCCAGGGAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVYWKAALRQAS*LDPKTEARELD Trigger: GTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR TCA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAACAATACATCGCTTATaGCTTGGTCTCACCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRTIHRL*LGLTFS Trigger: AGAAAAGGTGAGACCAAGTCATAAGCGATGTATTGT...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAAATTGCATGAAGACTGGTaGGGGATATTGGGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQVCWTQRPRPGNLTRGKLHEDW*GILGRS Trigger: ACTCCTACCCAATATCCCTCACCAGTCTTCATGCAA...TTTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTAGAAAGAAAGATCCTTaGACTAGATCTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFRKKDP*TRSAQW Trigger: CCACTGAGCAGATCTAGTTCAAGGATCTTTCTTTCT...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAAAGTTCAGTTACAGGAGTaGCATCCGGATTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQVCWTQRPRPGNLTRGKVQLQE*HPDFQK Trigger: CTTCTGGAAATCCGGATGGCACTCCTGTAACTGAAC...TTTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAATGGGAGCCTCCTTTaGAAGATAAGTTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQASLLDPKTEARELDTGNGSLL*KISLFL Trigger: CAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATT...CCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTAATGGGAGCCTCCTTTaGAAGATAAGTTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFNGSLL*KISLFL Trigger: CAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATT...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCTGGCTTTGTGGCAGTTaGAGAAGACACTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YWKAALRQASLLDPKTEAWLCGS*RRHWHS Trigger: GCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCA...GGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAAAGGTGTGAGAGAAAGAAAGATCCTTaGACTAGATCTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDPKTEARELDTGKRCERKKDP*TRSAQW Trigger: CCACTGAGCAGATCTAGTTCAAGGATCTTTCTTTCT...CTCACACCTTTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAAGTTGAGAGTGTCCTTTaGAACAGCAGAGTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAALRQASLLDPKTEAREVESVL*NSRVLH Trigger: ATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAAC...TTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGTTGGAGAAGACACTaGCACAGCTACTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YWKAALRQASLLDPKTEASWRRH*HSYWVE Trigger: CTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACT...GGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| 3UTR CAA 72 bp | GCAAATCAAACTTCGGAGTTGGAGCCTTGGCTTCAGTaGCTGCAGGTTGGGGTCTTGGGATCCTGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANQTSELEPWLQ*LQVGVLGSCHH Trigger: ATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAAAGGTGTGAGACAATACATCGCTTATaGCTTGGTCTCACCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLDPKTEARELDTGKRCETIHRL*LGLTFS Trigger: AGAAAAGGTGAGACCAAGTCATAAGCGATGTATTGT...CTCACACCTTTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAACGTGTTTGCCGGGGATaGCTTTGTGGCAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCQHKHQELNPSAVQLCQRVCRG*LCGSWR Trigger: TCTCCAACTGCCACAAAGCCATCCCCGGCAAACACG...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAACACTGGCACAGCTACTaGGTTGAGAGTGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCQHKHQELNPSAVQLCQHWHSY*VESVLW Trigger: CCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTG...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | ATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGCACTGGCACAGCTACTaGGTTGAGAGTGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRVYWKAALRQASLLDPKHWHSY*VESVLW Trigger: CCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTG...CTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | CGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCACATCGCTTATGACTTaGTCTCACCTTTTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVYWKAALRQASLLDPKTTSLMT*SHLFSL Trigger: AAGGGAGAAAAGGTGAGACCAAGTCATAAGCGATGT...GGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCCTGTTACTGTTGGGTTATGCCGTTCAGAAAGAAAGATCCTTGAACTAGTTCAGTTACAGGAGTaGCATCCGGATTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCPVTVGLCRSERKILELVQLQE*HPDFQK Trigger: CTTCTGGAAATCCGGATGGCACTCCTGTAACTGAAC...TAGTTCAAGGATCTTTCTTTCTGAACGGCATAACCCAACAGTAACAGGGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230521.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAGTCCTCTGCAGGCACTaGGCAACTAACTCGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTVLCRH*ATNSHV Trigger: GACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGAC...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAAAATGGGAGCCTCCTTTaGAAGATAAGTTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCQHKHQELNPSAVQLCQNGSLL*KISLFL Trigger: CAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATT...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
||
| CDS-3UTR CCA 90 bp | ATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGGTTCCATCTGTAAAATaGGAGCCTCCTTTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRVYWKAALRQASLLDPKVPSVK*EPPLED Trigger: ATCTTCCAAAGGAGGCTCCCATTTTACAGATGGAAC...CTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | GATTCTATTAAATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTCAGTTGCTGCAGGTTaGGGTCTTGGGATCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSIKYGFIGKLLLDRQVCSVAAG*GLGILS Trigger: TGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA...GCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTATTTAATAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACGTGTTTGCCGGGGATaGCTTTGTGGCAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTRVCRG*LCGSWR Trigger: TCTCCAACTGCCACAAAGCCATCCCCGGCAAACACG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR GCA 90 bp | ATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGAAGTATTTAAAAGCCTaGTGTGCATCTGTGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRVYWKAALRQASLLDPKKYLKA*CASVSD Trigger: GTCAGACACAGATGCACAGCAGGCTTTTAAATACTT...CTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACACTGGCACAGCTACTaGGTTGAGAGTGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTHWHSY*VESVLW Trigger: CCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAAGTTGGAGAAGACACTaGCACAGCTACTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTSWRRH*HSYWVE Trigger: CTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACT...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATTGCATGAAGACTGGTaGGGGATATTGGGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLHEDW*GILGRS Trigger: ACTCCTACCCAATATCCCTCACCAGTCTTCATGCAA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACTGCCCTGTTACTGTTaGGTTATGCCGTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLPCYC*VMPFRK Trigger: CTTTCTGAACGGCATAACCCAACAGTAACAGGGCAG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACTTACACATATCTTCTaGAAGTTCTGTATGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLTHIF*KFCMAL Trigger: GAGGGCCATACAGAACTTTCAGAAGATATGTGTAAG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 |
||
| CDS-3UTR GCA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAAAGTATTTAAAAGCCTaGTGTGCATCTGTGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSSYYCKLSLRKINHPTKYLKA*CASVSD Trigger: GTCAGACACAGATGCACAGCAGGCTTTTAAATACTT...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGGAGCCTTGGCTTCAGTaGCTGCAGGTTGGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWEPWLQ*LQVGVL Trigger: CAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTC...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGTTGCCGGGGATGGCTTaGTGGCAGTTGGAGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLLPGMA*WQLEKT Trigger: TGTCTTCTCCAACTGCCACAAAGCCATCCCCGGCAA...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTCAGTTGCTGCAGGTaGGGGTCTTGGGATCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRFSCCR*GSWDPV Trigger: GACAGGATCCCAAGACCCCAACCTGCAGCAACTGAA...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGGGCACAGCTACTGGGTaGAGAGTGTCCTTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWGTATG*RVSFGT Trigger: TGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCC...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTGCCGGGGATGGCTTaGTGGCAGTTGGAGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRLPGMA*WQLEKT Trigger: TGTCTTCTCCAACTGCCACAAAGCCATCCCCGGCAA...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGCTGCCCTGTTACTGTaGGGTTATGCCGTTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLAALLL*GYAVQK Trigger: TTTCTGAACGGCATAACCCAACAGTAACAGGGCAGC...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTTTCAGTTGCTGCAGGTaGGGGTCTTGGGATCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFFSCCR*GSWDPV Trigger: GACAGGATCCCAAGACCCCAACCTGCAGCAACTGAA...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAAAGGTGTGAGGAGCCTTGGCTTCAGTaGCTGCAGGTTGGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLDPKTEARELDTGKRCEEPWLQ*LQVGVL Trigger: CAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTC...CTCACACCTTTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAGGCACAGCTACTGGGTaGAGAGTGTCCTTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRGTATG*RVSFGT Trigger: TGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCC...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS GCA 90 bp | AGGCTTCTCGGGAGCTCCGTTCTCTTCATTTCTGGTGGGGGATACTaGATTAGACCGGAGTTCCCGCAGCGGCTGTACGAGAACTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLLGSSVLFISGGGY*IRPEFPQRLYENWR Trigger: TCTCCAGTTCTCGTACAGCCGCTGCGGGAACTCCGGTCTAATGCAGTATCCCCCACCAGAAATGAAGAGAACGGAGCTCCCGAGAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGATGTACCAGTTGCTGTaGTGCGCAAACTCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLMYQLL*CANSQL Trigger: AAGCTGTGAGTTTGCGCACAACAGCAACTGGTACAT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCAGGGAACTTGACACGGGGAAATTCAGTTGCTGCAGGTaGGGGTCTTGGGATCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QASLLDPKTEARELDTGKFSCCR*GSWDPV Trigger: GACAGGATCCCAAGACCCCAACCTGCAGCAACTGAA...TTTCCCCGTGTCAAGTTCCCTGGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
||
| CDS-3UTR CAA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTGGCACAGCTACTGGGTaGAGAGTGTCCTTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFGTATG*RVSFGT Trigger: TGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCC...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTATGGCTTTGTGGCAGTaGGAGAAGACACTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFMALWQ*EKTLAQ Trigger: CTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCAT...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS TCA 90 bp | CTGCAGGGCCACAGCTCTCGGTGGGTTTATGTTACTAGTGCAAGGTaGAGCCGTGTTTGCCGGGGATGGCTTTGTGGCAGTTGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQGHSSRWVYVTSAR*SRVCRGWLCGSWRR Trigger: TCTTCTCCAACTGCCACAAAGCCATCCCCGGCAAACACGGCTTCACCTTGCACTAGTAACATAAACCCACCGAGAGCTGTGGCCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000230956.2 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAATGTACCAGTTGCTGTaGTGCGCAAACTCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRMYQLL*CANSQL Trigger: AAGCTGTGAGTTTGCGCACAACAGCAACTGGTACAT...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGCTTTGGAAGATAAGTTaGTTCCTGCTGCCCTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LDGLGLRSTCHTSGGQGWLWKIS*FLLPCY Trigger: GTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAG...CCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | GGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGATTTATGTACCAGTTGCTGTaGTGCGCAAACTCACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: GLGLRSTCHTSGGQGWRFMYQLL*CANSQL Trigger: AAGCTGTGAGTTTGCGCACAACAGCAACTGGTACAT...AAATCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGACTTTGGAAGATAAGTTaGTTCCTGCTGCCCTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRLWKIS*FLLPCY Trigger: GTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAG...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | CCTGGATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGAAATGGGAGCCTCCTTaGGAAGATAAGTTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PGWTGTEIHLPHLWRPGLKWEPP*EDKFVP Trigger: AGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTT...CAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | GATGGACTGGGACTGAGATCCACCTGCCACACCTCTGGAGGCCAGGGTTGGAGAAAATGGGAGCCTCCTTaGGAAGATAAGTTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DGLGLRSTCHTSGGQGWRKWEPP*EDKFVP Trigger: AGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTT...TCTCCAACCCTGGCCTCCAGAGGTGTGGCAGGTGGATCTCAGTCCCAGTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | TATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCATGGCTTTGTGGCAGTaGGAGAAGACACTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: YWKAALRQASLLDPKTEAMALWQ*EKTLAQ Trigger: CTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCAT...GGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | CGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCTTGCCGGGGATGGCTTaGTGGCAGTTGGAGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: RVYWKAALRQASLLDPKTLPGMA*WQLEKT Trigger: TGTCTTCTCCAACTGCCACAAAGCCATCCCCGGCAA...GGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | TATTGCCAACACAAGCATCAGGAACTGAACCCCAGTGCTGTTCAACTGTGTCAAGAGCCTTGGCTTCAGTaGCTGCAGGTTGGGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: YCQHKHQELNPSAVQLCQEPWLQ*LQVGVL Trigger: CAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTC...TTGACACAGTTGAACAGCACTGGGGTTCAGTTCCTGATGCTTGTGTTGGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100206.4 |
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| CDS-3UTR CAA 90 bp | TATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGACCGAGGCCCTTTGGAAGATAAGTTaGTTCCTGCTGCCCTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: YWKAALRQASLLDPKTEALWKIS*FLLPCY Trigger: GTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAG...GGCCTCGGTCTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | ATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGGGCACAGCTACTGGGTaGAGAGTGTCCTTTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: IRVYWKAALRQASLLDPKGTATG*RVSFGT Trigger: TGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCC...CTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | ATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCTGGACCCAAAGAAATGGGAGCCTCCTTaGGAAGATAAGTTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: IRVYWKAALRQASLLDPKKWEPP*EDKFVP Trigger: AGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTT...CTTTGGGTCCAGCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATTCAGTTGCTGCAGGTaGGGGTCTTGGGATCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RDSSYYCKLSLRKINHPTFSCCR*GSWDPV Trigger: GACAGGATCCCAAGACCCCAACCTGCAGCAACTGAA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACATTGCCGGGGATGGCTTaGTGGCAGTTGGAGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLPGMA*WQLEKT Trigger: TGTCTTCTCCAACTGCCACAAAGCCATCCCCGGCAA...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAATGGCTTTGTGGCAGTaGGAGAAGACACTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: RDSSYYCKLSLRKINHPTMALWQ*EKTLAQ Trigger: CTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCAT...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | GATTCTATTAAATACGGGTTTATTGGAAAGCTGCTCTTAGACAGGCAAGTTTGCATGTACCAGTTGCTGTaGTGCGCAAACTCACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSIKYGFIGKLLLDRQVCMYQLL*CANSQL Trigger: AAGCTGTGAGTTTGCGCACAACAGCAACTGGTACAT...GCAAACTTGCCTGTCTAAGAGCAGCTTTCCAATAAACCCGTATTTAATAGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230956.2 |
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| CDS-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACACTTTGGAAGATAAGTTaGTTCCTGCTGCCCTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: RDSSYYCKLSLRKINHPTLWKIS*FLLPCY Trigger: GTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAG...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS-3UTR CAA 90 bp | AGAGACAGCTCTTACTATTGTAAACTGTCCCTAAGAAAAATAAACCACCCTACAAAATGGGAGCCTCCTTaGGAAGATAAGTTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RDSSYYCKLSLRKINHPTKWEPP*EDKFVP Trigger: AGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTT...TGTAGGGTGGTTTATTTTTCTTAGGGACAGTTTACAATAGTAAGAGCTGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS GCA 72 bp | GGGAGCTCCGTTCTCTTCATTTCTGGTGGGGGATACTaGATTAGACCGGAGTTCCCGCAGCGGCTGTACGAG | + |
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Preference number: 6 (lower is better) Translates to: GSSVLFISGGGY*IRPEFPQRLYE Trigger: CTCGTACAGCCGCTGCGGGAACTCCGGTCTAATGCAGTATCCCCCACCAGAAATGAAGAGAACGGAGCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000231160.2 |
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| CDS CCA 72 bp | TGCCGGGGATGGCTTTGTGGCAGTTGGAGAAGACACTaGCACAGCTACTGGGTTGAGAGTGTCCTTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CRGWLCGSWRRH*HSYWVESVLWN Trigger: GTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCATCCCCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000230956.2 ENSMUST00000231160.2 |
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| CDS TCA 72 bp | CACAGCTCTCGGTGGGTTTATGTTACTAGTGCAAGGTaGAGCCGTGTTTGCCGGGGATGGCTTTGTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HSSRWVYVTSAR*SRVCRGWLCGS Trigger: ACTGCCACAAAGCCATCCCCGGCAAACACGGCTTCACCTTGCACTAGTAACATAAACCCACCGAGAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057632.16 ENSMUST00000100206.4 ENSMUST00000230956.2 ENSMUST00000231160.2 |
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