Pregenerated sensors for LARP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037331Ensembl transcript IDs: ENSMUST00000071487.13, ENSMUST00000178636.2
Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGGAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTaGGGCTCACAGGTTTGCAAACCACCATCTGCCCCTTGCTGGGGC | + |
Preference number: 1 (lower is better) Translates to: WSRARQPSLRVANLL*GSQVCKPPSAPCWG Trigger: GCCCCAGCAAGGGGCAGATGGTGGTTTGCAAACCTGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | GGCGGTTCCATTTGGCAGGCTGTCTGTCTTAGGTCTTGGATTCCATaGGAAGATGGTGATGGGGAAGTGGCTTGCTCTGGTGCCCCACCC | + |
Preference number: 1 (lower is better) Translates to: GGSIWQAVCLRSWIP*EDGDGEVACSGAPP Trigger: GGGTGGGGCACCAGAGCAAGCCACTTCCCCATCACCATCTTCCCATGGAATCCAAGACCTAAGACAGACAGCCTGCCAAATGGAACCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 90 bp | AGTAGCAAATCTGCTCTGAGGCTCACAGGTTTGCAAACCACCATCTaGCCCTTGCTGGGGCCAGGTGGATGTCTAACCCTGCACAGGCAG | + |
Preference number: 1 (lower is better) Translates to: SSKSALRLTGLQTTI*PLLGPGGCLTLHRQ Trigger: CTGCCTGTGCAGGGTTAGACATCCACCTGGCCCCAGCAAGGGGCAGATGGTGGTTTGCAAACCTGTGAGCCTCAGAGCAGATTTGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | TTACCCTCCTCAGCTCCTGGTGACAGCAGCCTCCAGCCACTCCTCTaGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAG | + |
Preference number: 1 (lower is better) Translates to: LPSSAPGDSSLQPLL*HLKCSSGSLAFEEK Trigger: CTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGAGTGGCTGGAGGCTGCTGTCACCAGGAGCTGAGGAGGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 90 bp | GACCACACCCCCTTGTGCCACCTAGGTCCAAGTGTAGGGTTAGCATaGAGTCTCCCAGCCTGTGTGCTCAGTCCTTCATTACCCTCCTCA | + |
Preference number: 1 (lower is better) Translates to: DHTPLCHLGPSVGLA*SLPACVLSPSLPSS Trigger: TGAGGAGGGTAATGAAGGACTGAGCACACAGGCTGGGAGACTTCATGCTAACCCTACACTTGGACCTAGGTGGCACAAGGGGGTGTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | CTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTaGGGAGATGTGCACACTGAGGACAAGTGTGTACCAGGCAAGACC | + |
Preference number: 1 (lower is better) Translates to: LSCGHQWVFNPLFWS*GDVHTEDKCVPGKT Trigger: GGTCTTGCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | ACAGACCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTaGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTGTACCAGGC | + |
Preference number: 1 (lower is better) Translates to: TDLSCGHQWVFNPLF*SWGDVHTEDKCVPG Trigger: GCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | GAGGATGAAGGCGGTTCCATTTGGCAGGCTGTCTGTCTTAGGTCTTaGATTCCATGGGAAGATGGTGATGGGGAAGTGGCTTGCTCTGGT | + |
Preference number: 1 (lower is better) Translates to: EDEGGSIWQAVCLRS*IPWEDGDGEVACSG Trigger: ACCAGAGCAAGCCACTTCCCCATCACCATCTTCCCATGGAATCCAAGACCTAAGACAGACAGCCTGCCAAATGGAACCGCCTTCATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 90 bp | TCCTTGAGGTCAAAGGTCGTTAAGGTTAGACACAGACCTAAGCTGTaGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGA | + |
Preference number: 1 (lower is better) Translates to: SLRSKVVKVRHRPKL*TSVGVQPLVLELGR Trigger: TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGGTCTGTGTCTAACCTTAACGACCTTTGACCTCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 90 bp | GTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTaGGGACAAGTGTGTACCAGGCAAGACCAATTATGTTTACAACAG | + |
Preference number: 1 (lower is better) Translates to: VGVQPLVLELGRCAH*GQVCTRQDQLCLQQ Trigger: CTGTTGTAAACATAATTGGTCTTGCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 90 bp | GACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTaGACACTGAGGACAAGTGTGTACCAGGCAAGACCAATTATGTTT | + |
Preference number: 1 (lower is better) Translates to: DISGCSTPCSGVGEM*TLRTSVYQARPIMF Trigger: AAACATAATTGGTCTTGCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACGGAGCAGAGCTGAGTaGGCCTGGAGAGGCGACAGC | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTRSRAE*AWRGDS Trigger: GCTGTCGCCTCTCCAGGCCCACTCAGCTCTGCTCCG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR TCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGCTCCTCAGCTCCTGGTaGCAGCAGCCTCCAGCCACT | + |
Preference number: 2 (lower is better) Translates to: GSKFSSASAVTMAGGEGGLLSSW*QQPPAT Trigger: AGTGGCTGGAGGCTGCTGTCACCAGGAGCTGAGGAG...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATTGCAAACCACCATCTaGCCCTTGCTGGGGCCAGGT | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTLQTTI*PLLGPG Trigger: ACCTGGCCCCAGCAAGGGGCAGATGGTGGTTTGCAA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGAGGGATGGGGTACTTaGAGGCTCCTGCCCAGGAGC | + |
Preference number: 2 (lower is better) Translates to: GSKFSSASAVTMAGGEGGEGWGT*RLLPRS Trigger: GCTCCTGGGCAGGAGCCTCCAAGTACCCCATCCCTC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR TCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATCCATGGGAAGATGGTaGTGGGGAAGTGGCTTGCTC | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTSMGRW*WGSGLL Trigger: GAGCAAGCCACTTCCCCATCACCATCTTCCCATGGA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACTTGTCAGCCTGGGATaGTGTGTCCCAGTCCCAACT | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTLVSLG*CVPVPT Trigger: AGTTGGGACTGGGACACAGCATCCCAGGCTGACAAG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CAA 90 bp | AAATCTGCTCTGAGGCTCACAGGTTTGCAAACCACCATCTGCCCCTaGCTGGGGCCAGGTGGATGTCTAACCCTGCACAGGCAGAGGATG | + |
Preference number: 2 (lower is better) Translates to: KSALRLTGLQTTICP*LGPGGCLTLHRQRM Trigger: CATCCTCTGCCTGTGCAGGGTTAGACATCCACCTGGCCCCAGCAAGGGGCAGATGGTGGTTTGCAAACCTGTGAGCCTCAGAGCAGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACCACATATACCTTCCTaGCATGGGGCTTCACCAAAC | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTPHIPS*HGASPN Trigger: GTTTGGTGAAGCCCCATGGCAGGAAGGTATATGTGG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCCACCATCTGCCCCTTaGTGGGGCCAGGTGGATGTC | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFPPSAP*WGQVDV Trigger: GACATCCACCTGGCCCCAGCAAGGGGCAGATGGTGG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGAGGGATGGGGTACTTaGAGGCTCCTGCCCAGGAGC | + |
Preference number: 2 (lower is better) Translates to: KLWTSVGVQPLVLELGRCEGWGT*RLLPRS Trigger: GCTCCTGGGCAGGAGCCTCCAAGTACCCCATCCCTC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTGCTTCTGGGGCCCATaGGCACCGCCAGAGCCTTCT | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFCFWGP*APPEPS Trigger: AGAAGGCTCTGGCGGTGCCCATGGGCCCCAGAAGCA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTCCTTCCCCCAGAGGTaGCAGAAGGGCATGTGGAAC | + |
Preference number: 2 (lower is better) Translates to: HTHTHSHPSSACVEMIALSFPQR*QKGMWN Trigger: GTTCCACATGCCCTTCTGCCACCTCTGGGGGAAGGA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGACATCCCGGGCAGGTaGAGCTCTTCCGGAGGCTCA | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFDIPGR*SSSGGS Trigger: TGAGCCTCCGGAAGAGCTCCACCTGCCCGGGATGTC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCGGAGCAGAGCTGAGTaGGCCTGGAGAGGCGACAGC | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYRSRAE*AWRGDS Trigger: GCTGTCGCCTCTCCAGGCCCACTCAGCTCTGCTCCG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGTCTTGTTCGCTCTTCTaGGCACCCCACAGATCCTCA | + |
Preference number: 2 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQSCSLF*APHRSS Trigger: TGAGGATCTGTGGGGTGCCCAGAAGAGCGAACAAGA...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGGTGGGCTGCATAGTTaGCTTGAGGGAAGCGGGAAG | + |
Preference number: 2 (lower is better) Translates to: PKLWTSVGVQPLVLELGRGGLHS*LEGSGK Trigger: CTTCCCGCTTCCCTCAAGCCAACTATGCAGCCCACC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTGCTTCTGGGGCCCATaGGCACCGCCAGAGCCTTCT | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYCFWGP*APPEPS Trigger: AGAAGGCTCTGGCGGTGCCCATGGGCCCCAGAAGCA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATCCTTCCCCCAGAGGTaGCAGAAGGGCATGTGGAAC | + |
Preference number: 2 (lower is better) Translates to: PKLWTSVGVQPLVLELGRSFPQR*QKGMWN Trigger: GTTCCACATGCCCTTCTGCCACCTCTGGGGGAAGGA...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGACATCCCGGGCAGGTaGAGCTCTTCCGGAGGCTCA | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYDIPGR*SSSGGS Trigger: TGAGCCTCCGGAAGAGCTCCACCTGCCCGGGATGTC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGAAGCAAACTTGGCCTTaGGGTTTCCCAGGGCTTGGC | + |
Preference number: 2 (lower is better) Translates to: HTHTHSHPSSACVEMIALKQTWP*GFPGLG Trigger: GCCAAGCCCTGGGAAACCCCAAGGCCAAGTTTGCTT...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACACAGACCTAAGCTGTaGACATCAGTGGGTGTTCAA | + |
Preference number: 2 (lower is better) Translates to: EQGQAAFPPSSKSALRLTHRPKL*TSVGVQ Trigger: TTGAACACCCACTGATGTCCACAGCTTAGGTCTGTG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGGGCCAATGAGAGGGTaGGCAGAGATGGCTTGCAGG | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFGPMRG*AEMACR Trigger: CCTGCAAGCCATCTCTGCCCACCCTCTCATTGGCCC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACATGGCAAACCCCAGGTaGTCAAGGGGCTGGTGCTTC | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYMANPR*SRGWCF Trigger: GAAGCACCAGCCCCTTGATCACCTGGGGTTTGCCAT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCCAGCCACTCCTCTaGCATCTCAAGTGCAGCTCA | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLQPLL*HLKCSS Trigger: TGAGCTGCACTTGAGATGCCAGAGGAGTGGCTGGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGCCCAGTCCCAACTTTTaGGACAATAGAGGAACTGGG | + |
Preference number: 2 (lower is better) Translates to: HTHTHSHPSSACVEMIALPSPNF*DNRGTG Trigger: CCCAGTTCCTCTATTGTCCCAAAAGTTGGGACTGGG...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAAGCTCTTGTCAGCCTaGGATGCTGTGTCCCAGTCC | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFKLLSA*DAVSQS Trigger: GGACTGGGACACAGCATCCCAGGCTGACAAGAGCTT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGAGGTTCTGTGGTGCTaGATATACAGTAGAGGGCTG | + |
Preference number: 2 (lower is better) Translates to: HTHTHSHPSSACVEMIALEVLWC*IYSRGL Trigger: CAGCCCTCTACTGTATATCCAGCACCACAGAACCTC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGAGCCCTGAGGTTCTGTaGTGCTGGATATACAGTAGA | + |
Preference number: 2 (lower is better) Translates to: GSKFSSASAVTMAGGEGGSPEVL*CWIYSR Trigger: TCTACTGTATATCCAGCACCACAGAACCTCAGGGCT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAGCCTTCTGGTGGGCTaGATAGTTGGCTTGAGGGAA | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFSLLVG*IVGLRE Trigger: TTCCCTCAAGCCAACTATGCAGCCCACCAGAAGGCT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGAGCCTTCTGGTGGGCTaGATAGTTGGCTTGAGGGAA | + |
Preference number: 2 (lower is better) Translates to: SSGISSAAQAVWLLKRSQSLLVG*IVGLRE Trigger: TTCCCTCAAGCCAACTATGCAGCCCACCAGAAGGCT...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR GCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAATTGGCTTCAGACAATaGAACAGCAGGGGTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: PKLWTSVGVQPLVLELGRIGFRQ*NSRGVL Trigger: CAGGACACCCCTGCTGTTGCATTGTCTGAAGCCAAT...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTCTTGTTCGCTCTTCTaGGCACCCCACAGATCCTCA | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFSCSLF*APHRSS Trigger: TGAGGATCTGTGGGGTGCCCAGAAGAGCGAACAAGA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCCCACTGAGATCCTTTaGTTTCCTTCCCCCAGAGGT | + |
Preference number: 2 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCPTEIL*FPSPRG Trigger: ACCTCTGGGGGAAGGAAACCAAAGGATCTCAGTGGG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCCCACTGAGATCCTTTaGTTTCCTTCCCCCAGAGGT | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFPTEIL*FPSPRG Trigger: ACCTCTGGGGGAAGGAAACCAAAGGATCTCAGTGGG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAAGCAAACTTGGCCTTaGGGTTTCCCAGGGCTTGGC | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYKQTWP*GFPGLG Trigger: GCCAAGCCCTGGGAAACCCCAAGGCCAAGTTTGCTT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR TCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGATGTTTACAACAGTCTaGAGCAAACTTGGCCTTGGG | + |
Preference number: 2 (lower is better) Translates to: HTHTHSHPSSACVEMIALMFTTV*SKLGLG Trigger: CCCAAGGCCAAGTTTGCTTCAGACTGTTGTAAACAT...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTATTGGCTTCAGACAATaGAACAGCAGGGGTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: VLNALSLMSRPSKQLAFFIGFRQ*NSRGVL Trigger: CAGGACACCCCTGCTGTTGCATTGTCTGAAGCCAAT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGGCAGAAGGGCATGTaGAACAGCAGGGACACGGTG | + |
Preference number: 2 (lower is better) Translates to: TLREWYLFSTSLRSKVVKWQKGM*NSRDTV Trigger: CACCGTGTCCCTGCTGTTCCACATGCCCTTCTGCCA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACAACAAGGACAGTaGCAACAGTGTGCAGACACA | + |
Preference number: 2 (lower is better) Translates to: KLWTSVGVQPLVLELGRCAQQGQ*QQCADT Trigger: TGTGTCTGCACACTGTTGCCACTGTCCTTGTTGTGC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTTTCAATAGTCTCTTCTaGTGTGAGCAGCGTCTCTGG | + |
Preference number: 2 (lower is better) Translates to: KLWTSVGVQPLVLELGRCFNSLF*CEQRLW Trigger: CCAGAGACGCTGCTCACACCAGAAGAGACTATTGAA...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTTCAATAGTCTCTTCTaGTGTGAGCAGCGTCTCTGG | + |
Preference number: 2 (lower is better) Translates to: GISSAAQAVWLLKRSQVYFNSLF*CEQRLW Trigger: CCAGAGACGCTGCTCACACCAGAAGAGACTATTGAA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGCACAACAAGGACAGTaGCAACAGTGTGCAGACACA | + |
Preference number: 2 (lower is better) Translates to: TLREWYLFSTSLRSKVVKAQQGQ*QQCADT Trigger: TGTGTCTGCACACTGTTGCCACTGTCCTTGTTGTGC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGCACAGACCTAAGCTGTaGACATCAGTGGGTGTTCAA | + |
Preference number: 2 (lower is better) Translates to: TLREWYLFSTSLRSKVVKHRPKL*TSVGVQ Trigger: TTGAACACCCACTGATGTCCACAGCTTAGGTCTGTG...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR CCA 72 bp | CTGGGCGGGGCGGGGCGGAGCAGAGCTGAGTGGGCCTaGAGAGGCGACAGCAAGCACAACAAGGACAGTGGC | + |
Preference number: 3 (lower is better) Translates to: LGGAGRSRAEWA*RGDSKHNKDSG Trigger: GCCACTGTCCTTGTTGTGCTTGCTGTCGCCTCTCCAGGCCCACTCAGCTCTGCTCCGCCCCGCCCCGCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
3UTR-3UTR CAA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAACCACCATCTGCCCCTaGCTGGGGCCAGGTGGATGT | + |
Preference number: 3 (lower is better) Translates to: EQGQAAFPPSSKSALRLTTTICP*LGPGGC Trigger: ACATCCACCTGGCCCCAGCAAGGGGCAGATGGTGGT...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | ACATTGAACAACTTGACCCGGGGCTCAGCACCTGTCTaGACCTGCGGTCCAGGCTGGAGCAGGGCCAGGCAG | + |
Preference number: 3 (lower is better) Translates to: TLNNLTRGSAPV*TCGPGWSRARQ Trigger: CTGCCTGGCCCTGCTCCAGCCTGGACCGCAGGTTCAGACAGGTGCTGAGCCCCGGGTCAAGTTGTTCAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACAGTCTGAAGCAAACTaGGCCTTGGGGTTTCCCAGG | + |
Preference number: 3 (lower is better) Translates to: EQGQAAFPPSSKSALRLTQSEAN*ALGFPR Trigger: CCTGGGAAACCCCAAGGCCAAGTTTGCTTCAGACTG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGGTCTGTCCCTTCTCTaGTTCGCTCTTCTGGGCACC | + |
Preference number: 3 (lower is better) Translates to: GSKFSSASAVTMAGGEGGGLSLL*FALLGT Trigger: GGTGCCCAGAAGAGCGAACAAGAGAAGGGACAGACC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTGGAGGGATGGGGTACTaGGAGGCTCCTGCCCAGGAG | + |
Preference number: 3 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCGGMGY*EAPAQE Trigger: CTCCTGGGCAGGAGCCTCCAAGTACCCCATCCCTCC...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGCAGGGAGCCCACTGTTaGGTGAAGGTGCACCATAGG | + |
Preference number: 3 (lower is better) Translates to: GSKFSSASAVTMAGGEGGQGAHC*VKVHHR Trigger: CCTATGGTGCACCTTCACCAAACAGTGGGCTCCCTG...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | GCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTaGGGCTCACAGGTTTGCAAACCACCATCTGCCCCT | + |
Preference number: 3 (lower is better) Translates to: ARQPSLRVANLL*GSQVCKPPSAP Trigger: AGGGGCAGATGGTGGTTTGCAAACCTGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGGAGGGATGGGGTACTaGGAGGCTCCTGCCCAGGAG | + |
Preference number: 3 (lower is better) Translates to: GISSAAQAVWLLKRSQVYGGMGY*EAPAQE Trigger: CTCCTGGGCAGGAGCCTCCAAGTACCCCATCCCTCC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGACAGAAGGCAAGCTCTaGTCAGCCTGGGATGCTGTG | + |
Preference number: 3 (lower is better) Translates to: GSKFSSASAVTMAGGEGGTEGKL*SAWDAV Trigger: CACAGCATCCCAGGCTGACAAGAGCTTGCCTTCTGT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | CCTAGTCTGGATAGCCTAGATGGAAACCACCTTCCCTaGTGCTGGGCCTCAAGCCCTGAGGTTCTGTGGTGC | + |
Preference number: 3 (lower is better) Translates to: PSLDSLDGNHLP*CWASSPEVLWC Trigger: GCACCACAGAACCTCAGGGCTTGAGGCCCAGCATCAGGGAAGGTGGTTTCCATCTAGGCTATCCAGACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | CCTGTGAGAACTGGGCTCAAAGTTTTCTTCTGCCTCTaGCGTAACCATGGCTGGAGGAGAGGGTGGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: PVRTGLKVFFCL*RNHGWRRGWEL Trigger: CAGCTCCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCCCAGTTCTCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGCTGCATAGTTGGCTaGAGGGAAGCGGGAAGAGGC | + |
Preference number: 3 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGCIVG*REAGRG Trigger: GCCTCTTCCCGCTTCCCTCAAGCCAACTATGCAGCC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGAACTGCCCCAACTCTaGCCTCCAGGTAGGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: GISSAAQAVWLLKRSQVYELPQL*PPGRRP Trigger: GGGCCTCCTACCTGGAGGCAAGAGTTGGGGCAGTTC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGAAGCAAACTTGGCCTaGGGGTTTCCCAGGGCTTGG | + |
Preference number: 3 (lower is better) Translates to: PKLWTSVGVQPLVLELGREANLA*GFPRAW Trigger: CCAAGCCCTGGGAAACCCCAAGGCCAAGTTTGCTTC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGTTCCTCTCACCCCCTaGATCCCAGGCAGGGCCAAT | + |
Preference number: 3 (lower is better) Translates to: VLNALSLMSRPSKQLAFFVPLTP*IPGRAN Trigger: ATTGGCCCTGCCTGGGATCAAGGGGGTGAGAGGAAC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGAGGATTCCCCAGCCCTaGGTTCCTCTCACCCCCTTG | + |
Preference number: 3 (lower is better) Translates to: SSGISSAAQAVWLLKRSQRIPQP*VPLTPL Trigger: CAAGGGGGTGAGAGGAACCAAGGGCTGGGGAATCCT...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | GAGAGGAGAAAGGGAAGCAGGGAGCCCACTGTTTGGTaGAGGTGCACCATAGGGCAGGTACCAGACTTAGGA | + |
Preference number: 3 (lower is better) Translates to: ERRKGSREPTVW*RCTIGQVPDLG Trigger: TCCTAAGTCTGGTACCTGCCCTATGGTGCACCTTCACCAAACAGTGGGCTCCCTGCTTCCCTTTCTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | CCCCAACTCTTGCCTCCAGGTAGGAGGCCCCGTACATaGAACTCAGTCTCGAGGAAAGTTCTAGTCAGTCCA | + |
Preference number: 3 (lower is better) Translates to: PQLLPPGRRPRT*NSVSRKVLVSP Trigger: TGGACTGACTAGAACTTTCCTCGAGACTGAGTTGCATGTACGGGGCCTCCTACCTGGAGGCAAGAGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | GACAGCAGCCTCCAGCCACTCCTCTGGCATCTCAAGTaGAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCA | + |
Preference number: 3 (lower is better) Translates to: DSSLQPLLWHLK*SSGSLAFEEKS Trigger: TGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGAGTGGCTGGAGGCTGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGGTCTGTCCCTTCTCTaGTTCGCTCTTCTGGGCACC | + |
Preference number: 3 (lower is better) Translates to: VLNALSLMSRPSKQLAFFGLSLL*FALLGT Trigger: GGTGCCCAGAAGAGCGAACAAGAGAAGGGACAGACC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGTTCCTCTCACCCCCTaGATCCCAGGCAGGGCCAAT | + |
Preference number: 3 (lower is better) Translates to: GISSAAQAVWLLKRSQVYVPLTP*IPGRAN Trigger: ATTGGCCCTGCCTGGGATCAAGGGGGTGAGAGGAAC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | GGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTaGACACTGAGGACAAGTGTGTACCAGGCAAGACCA | + |
Preference number: 3 (lower is better) Translates to: GCSTPCSGVGEM*TLRTSVYQARP Trigger: TGGTCTTGCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | CAGAGTGGGGCAAGGCATGAGCTCAAAGTAACAAGGTaGCCAAAGACAGAAGGCAAGCTCTTGTCAGCCTGG | + |
Preference number: 3 (lower is better) Translates to: QSGARHELKVTR*PKTEGKLLSAW Trigger: CCAGGCTGACAAGAGCTTGCCTTCTGTCTTTGGGCACCTTGTTACTTTGAGCTCATGCCTTGCCCCACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR GCA 72 bp | TCCTTTCCTGTGAGAACTGGGCTCAAAGTTTTCTTCTaGCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGG | + |
Preference number: 3 (lower is better) Translates to: SFPVRTGLKVFF*LCRNHGWRRGW Trigger: CCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCCCAGTTCTCACAGGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 72 bp | GGCGGTTCCATTTGGCAGGCTGTCTGTCTTAGGTCTTaGATTCCATGGGAAGATGGTGATGGGGAAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: GGSIWQAVCLRS*IPWEDGDGEVA Trigger: AGCCACTTCCCCATCACCATCTTCCCATGGAATCCAAGACCTAAGACAGACAGCCTGCCAAATGGAACCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGAACTGCCCCAACTCTaGCCTCCAGGTAGGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: TLREWYLFSTSLRSKVVKELPQL*PPGRRP Trigger: GGGCCTCCTACCTGGAGGCAAGAGTTGGGGCAGTTC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAAAGACCACACCCCCTaGTGCCACCTAGGTCCAAGT | + |
Preference number: 3 (lower is better) Translates to: VLNALSLMSRPSKQLAFFKDHTP*CHLGPS Trigger: ACTTGGACCTAGGTGGCACAAGGGGGTGTGGTCTTT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | CCCTTGTGCCACCTAGGTCCAAGTGTAGGGTTAGCATaGAGTCTCCCAGCCTGTGTGCTCAGTCCTTCATTA | + |
Preference number: 3 (lower is better) Translates to: PLCHLGPSVGLA*SLPACVLSPSL Trigger: TAATGAAGGACTGAGCACACAGGCTGGGAGACTTCATGCTAACCCTACACTTGGACCTAGGTGGCACAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 72 bp | GGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTaGGGAGATGTGCACACTGAGGACAAGTGTGTACCA | + |
Preference number: 3 (lower is better) Translates to: GHQWVFNPLFWS*GDVHTEDKCVP Trigger: TGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCAGTCTGAAGCAAACTaGGCCTTGGGGTTTCCCAGG | + |
Preference number: 3 (lower is better) Translates to: GISSAAQAVWLLKRSQVYQSEAN*ALGFPR Trigger: CCTGGGAAACCCCAAGGCCAAGTTTGCTTCAGACTG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTGGGTGTTCAACCCCTaGTTCTGGAGTTGGGGAGAT | + |
Preference number: 3 (lower is better) Translates to: SSGISSAAQAVWLLKRSQWVFNP*FWSWGD Trigger: ATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGAAGCAAACTTGGCCTaGGGGTTTCCCAGGGCTTGG | + |
Preference number: 3 (lower is better) Translates to: TLREWYLFSTSLRSKVVKEANLA*GFPRAW Trigger: CCAAGCCCTGGGAAACCCCAAGGCCAAGTTTGCTTC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 72 bp | GGCAGAGATGGCTTGCAGGGGGTGGTGGTAATAAGATaGAAAGACAACACCAGACCCTTAGAGAATGGTACC | + |
Preference number: 3 (lower is better) Translates to: GRDGLQGVVVIR*KDNTRPLENGT Trigger: GGTACCATTCTCTAAGGGTCTGGTGTTGTCTTTCCATCTTATTACCACCACCCCCTGCAAGCCATCTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 72 bp | ATTTGGCAGGCTGTCTGTCTTAGGTCTTGGATTCCATaGGAAGATGGTGATGGGGAAGTGGCTTGCTCTGGT | + |
Preference number: 3 (lower is better) Translates to: IWQAVCLRSWIP*EDGDGEVACSG Trigger: ACCAGAGCAAGCCACTTCCCCATCACCATCTTCCCATGGAATCCAAGACCTAAGACAGACAGCCTGCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | CAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTaGGGACAAGTGTGTACCAGGCAAGACCAATTATGT | + |
Preference number: 3 (lower is better) Translates to: QPLVLELGRCAH*GQVCTRQDQLC Trigger: ACATAATTGGTCTTGCCTGGTACACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTACAGAACAAAAACATaGAACAACTTGACCCGGGGC | + |
Preference number: 3 (lower is better) Translates to: VLNALSLMSRPSKQLAFFYRTKT*NNLTRG Trigger: GCCCCGGGTCAAGTTGTTCAATGTTTTTGTTCTGTA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR TCA 72 bp | AGACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTaGGGTCAAAGGTCGTTAAGGTTAGACACAGACCTA | + |
Preference number: 3 (lower is better) Translates to: RPLENGTFSPPP*GQRSLRLDTDL Trigger: TAGGTCTGTGTCTAACCTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CCA 72 bp | AATAAGATGGAAAGACAACACCAGACCCTTAGAGAATaGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTC | + |
Preference number: 3 (lower is better) Translates to: NKMERQHQTLRE*YLFSTSLRSKV Trigger: GACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGTCTGGTGTTGTCTTTCCATCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGCCGGCGGCGGCGCGTaGTTCGTCCACGGGTTCACC | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGAGGGA*FVHGFT Trigger: GGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATCCACGGGTTCACCTTaGGCGGCGGTGCCTCCACGA | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTSTGSP*AAVPPR Trigger: TCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATTGTTGGCACTGGGGTaGCTGCACGGGGAGAGCCAG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTLLALG*LHGESQ Trigger: CTGGCTCTCCCCGTGCAGTCACCCCAGTGCCAACAA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGCCGGCGGCGGCGCGTaGTTCGTCCACGGGTTCACC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFAGGGA*FVHGFT Trigger: GGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACGGTTTAGGAGCAGCTaGCCTCACCACCTTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTRFRSS*PHHLGW Trigger: CCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAACGGGGAGAGCCAGGTaGCGACTCTGTCTCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTTGRAR*RLCLFL Trigger: CAGAAAGAGACAGAGTCGGCACCTGGCTCTCCCCGT...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGGTGTCGCTTGTGGTTaGCTTCCTCGCCCATGGGGG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGGVACG*LPRPWG Trigger: CCCCCATGGGCGAGGAAGGCAACCACAAGCGACACC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTTCCGCAGCTGCGGGTaGCCGCGGGCTCTCGCGCTC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYFRSCG*PRALAL Trigger: GAGCGCGAGAGCCCGCGGCCACCCGCAGCTGCGGAA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGAACCTGGGCTCCTCTaGCTTCTTGGGGCGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGEPGLL*LLGACW Trigger: CCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATTGGGTGGGAGAACCTaGGCTCCTCTGGCTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTLGGRT*APLASW Trigger: CCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTCCTCGCCAGGCCGTaGTCCTCGGCCTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFFLARP*SSACSS Trigger: GCTGCTGCAGGCCGAGGAGCACGGCCTGGCGAGGAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGGCAGTCCTGGGCCTGTaGTCCCGAGAATCCATCACC | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQAVLGL*SRESIT Trigger: GGTGATGGATTCTCGGGAGCACAGGCCCAGGACTGC...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGTTCTGCCCGCCTCGCTaGCAGTCCTCATCCCCATTC | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGFCPPR*QSSSPF Trigger: GAATGGGGATGAGGACTGCCAGCGAGGCGGGCAGAA...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGCTCCTCTGGCTTCTTaGGGCGTGCTGGTGAGGGTC | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALAPLAS*GVLVRV Trigger: GACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGGCCTGCTGGAAGACTaGGAAGGGCACCGCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALGLLED*EGHRFL Trigger: CAGGAAGCGGTGCCCTTCCCAGTCTTCCAGCAGGCC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTTCCTCGCCAGGCCGTaGTCCTCGGCCTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYFLARP*SSACSS Trigger: GCTGCTGCAGGCCGAGGAGCACGGCCTGGCGAGGAA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTGGCACTGGGGTGACTaGACGGGGAGAGCCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCWHWGD*TGRARC Trigger: GCACCTGGCTCTCCCCGTGCAGTCACCCCAGTGCCA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGCAGTCCTGGGCCTGTaGTCCCGAGAATCCATCACC | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALAVLGL*SRESIT Trigger: GGTGATGGATTCTCGGGAGCACAGGCCCAGGACTGC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGGGTACAGCCATAGCTaGCGACTGCAGGTGTTCCCT | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGGYSHS*RLQVFP Trigger: AGGGAACACCTGCAGTCGGCAGCTATGGCTGTACCC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTCCGCAGCTGCGGGTaGCCGCGGGCTCTCGCGCTC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKFRSCG*PRALAL Trigger: GAGCGCGAGAGCCCGCGGCCACCCGCAGCTGCGGAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTCCACGGGTTCACCTTaGGCGGCGGTGCCTCCACGA | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFSTGSP*AAVPPR Trigger: TCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGTTGGGTGGGAGAACCTaGGCTCCTCTGGCTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGLGGRT*APLASW Trigger: CCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAA...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAGAGACTCTGGGACAGTaGTTGGTAGAGAACGGGCAA | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTETLGQ*LVENGQ Trigger: TTGCCCGTTCTCTACCAACCACTGTCCCAGAGTCTC...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGACTGGGTGTCGCTTGTaGTTGCCTTCCTCGCCCATG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGTGCRL*LPSSPM Trigger: CATGGGCGAGGAAGGCAACCACAAGCGACACCCAGT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CAA 72 bp | CCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAGGTTaGCAAACCACCATCTGCCCCTTGCTGGGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: PPSSKSALRLTG*QTTICPLLGPG Trigger: ACCTGGCCCCAGCAAGGGGCAGATGGTGGTTTGCAAACCTGTGAGCCTCAGAGCAGATTTGCTACTCGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTGTTGGCACTGGGGTaGCTGCACGGGGAGAGCCAG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLLALG*LHGESQ Trigger: CTGGCTCTCCCCGTGCAGTCACCCCAGTGCCAACAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAGGGTCTTCAGGTTGCTaGCCTCCTCTGTTTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTGSSGC*PPLFLL Trigger: CAACAAAAACAGAGGAGGTCAGCAACCTGAAGACCC...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGCTGGAACTTGGGCAGTaGCTGAGGGGTACAGCCATA | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQLELGQ*LRGTAI Trigger: TATGGCTGTACCCCTCAGTCACTGCCCAAGTTCCAG...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGAGGGTGTTCATCTCCTaGGACTGGCCAATGCCCAAG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGRVFIS*DWPMPK Trigger: CTTGGGCATTGGCCAGTCTCAGGAGATGAACACCCT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACCTCCTGGAAATCCTTaGATATGTCCAGCCGGAACT | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTPPGNP*ICPAGT Trigger: AGTTCCGGCTGGACATATTCAAGGATTTCCAGGAGG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTGGCACTGGGGTGACTaGACGGGGAGAGCCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYWHWGD*TGRARC Trigger: GCACCTGGCTCTCCCCGTGCAGTCACCCCAGTGCCA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGGTGTCGCTTGTGGTTaGCTTCCTCGCCCATGGGGG | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCGVACG*LPRPWG Trigger: CCCCCATGGGCGAGGAAGGCAACCACAAGCGACACC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGACTCTCCGCTGCCTCCTaGTACCACTGGGTGTCGCTT | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRLSAAS*YHWVSL Trigger: AAGCGACACCCAGTGGTAGCAGGAGGCAGCGGAGAG...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAAGGGCACCGCTTCCTaGCCTCTCCGCTGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYKGTAS*PLRCLL Trigger: CAGGAGGCAGCGGAGAGGGCAGGAAGCGGTGCCCTT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGTGGGGGTCCAGGCAGTaGCCACTTTTCAGGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQWGSRQ*PLFRFF Trigger: GAAGAACCTGAAAAGTGGCCACTGCCTGGACCCCCA...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGAACCTGGGCTCCTCTaGCTTCTTGGGGCGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQEPGLL*LLGACW Trigger: CCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGTTGGCACGCGAAGTGTaGTTGCCTGTACGGTCTCCT | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQLAREV*LPVRSP Trigger: AGGAGACCGTACAGGCAACCACACTTCGCGTGCCAA...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGACCAGGAGGAACCTCCTaGTTAGGATCCACAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRPGGTS*LGSTGG Trigger: GCCCCCTGTGGATCCTAACCAGGAGGTTCCTCCTGG...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCTAGAGTCTTTGAGCTaGGGGGTCCGGGGTGTGCGG | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCLESLS*GVRGVR Trigger: CCGCACACCCCGGACCCCCCAGCTCAAAGACTCTAG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGGCCTGCTGGAAGACTaGGAAGGGCACCGCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFGLLED*EGHRFL Trigger: CAGGAAGCGGTGCCCTTCCCAGTCTTCCAGCAGGCC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CAA 72 bp | CAATTATGTTTACAACAGTCTGAAGCAAACTTGGCCTaGGGGTTTCCCAGGGCTTGGCTGGGCGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: QLCLQQSEANLA*GFPRAWLGGAG Trigger: CCCCGCCCCGCCCAGCCAAGCCCTGGGAAACCCCAAGGCCAAGTTTGCTTCAGACTGTTGTAAACATAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGTCTCATCCTGGTCGTaGCAGGCAGGCTCCACTTTG | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRVSSWS*QAGSTL Trigger: CAAAGTGGAGCCTGCCTGGCACGACCAGGATGAGAC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCTCCGCTGCCTCCTaGTACCACTGGGTGTCGCTT | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLSAAS*YHWVSL Trigger: AAGCGACACCCAGTGGTAGCAGGAGGCAGCGGAGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCCCTTTCTTCTTCTaGCCGCCTCGCTGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLPFFF*PPRWQS Trigger: GGACTGCCAGCGAGGCGGGCAGAAGAAGAAAGGGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGGAGCAGAAGGTTCTaGAGGCGGCTGTCCGTTCAC | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRWSRRF*RRLSVH Trigger: GTGAACGGACAGCCGCCTCCAGAACCTTCTGCTCCA...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGATGTCTTGGTTCCTGTaGGCGAGTGGGACGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQMSWFL*ASGTGG Trigger: GCCTCCCGTCCCACTCGCCCACAGGAACCAAGACAT...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTCTCGATGTCTCATCCTaGTCGTGCCAGGCAGGCTCC | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCLDVSS*SCQAGS Trigger: GGAGCCTGCCTGGCACGACCAGGATGAGACATCGAG...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCGATGTCTCATCCTaGTCGTGCCAGGCAGGCTCC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLDVSS*SCQAGS Trigger: GGAGCCTGCCTGGCACGACCAGGATGAGACATCGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGCTCCTCTGTTTTTGTTaGCACTGGGGTGACTGCACG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGLLCFC*HWGDCT Trigger: CGTGCAGTCACCCCAGTGCCAACAAAAACAGAGGAG...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCCAGGAGGAACCTCCTaGTTAGGATCCACAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFPGGTS*LGSTGG Trigger: GCCCCCTGTGGATCCTAACCAGGAGGTTCCTCCTGG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCTAGAGTCTTTGAGCTaGGGGGTCCGGGGTGTGCGG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYLESLS*GVRGVR Trigger: CCGCACACCCCGGACCCCCCAGCTCAAAGACTCTAG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCAGTGGCAGGCCTGCTaGAAGACTGGGAAGGGCACC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYQWQAC*KTGKGT Trigger: GGTGCCCTTCCCAGTCTTCCAGCAGGCCTGCCACTG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACAAACTCTGGGCAGTTaGGAAGCTGAGAAAAATCAG | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTQTLGS*EAEKNQ Trigger: CTGATTTTTCTCAGCTTCTCAACTGCCCAGAGTTTG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTGTCTCATCCTGGTCGTaGCAGGCAGGCTCCACTTTG | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCVSSWS*QAGSTL Trigger: CAAAGTGGAGCCTGCCTGGCACGACCAGGATGAGAC...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTACGGGGAGAGCCAGGTaGCGACTCTGTCTCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFTGRAR*RLCLFL Trigger: CAGAAAGAGACAGAGTCGGCACCTGGCTCTCCCCGT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGGGTACAGCCATAGCTaGCGACTGCAGGTGTTCCCT | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCGYSHS*RLQVFP Trigger: AGGGAACACCTGCAGTCGGCAGCTATGGCTGTACCC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGCCTGAGACTGGCCAATaGCCAAGCGCTTCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQPETGQ*PSASAH Trigger: ATGAGCGGAAGCGCTTGGGCATTGGCCAGTCTCAGG...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCCTGAGACTGGCCAATaGCCAAGCGCTTCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFPETGQ*PSASAH Trigger: ATGAGCGGAAGCGCTTGGGCATTGGCCAGTCTCAGG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGAAGGGCACCGCTTCCTaGCCTCTCCGCTGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKKGTAS*PLRCLL Trigger: CAGGAGGCAGCGGAGAGGGCAGGAAGCGGTGCCCTT...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGCATGTCCTTCTTAGGTaGCAACTTACGAGCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGHVLLR*QLTSRL Trigger: CAGCCTGCTCGTAAGTTGCCACCTAAGAAGGACATG...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTTCTGCCCGCCTCGCTaGCAGTCCTCATCCCCATTC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYFCPPR*QSSSPF Trigger: GAATGGGGATGAGGACTGCCAGCGAGGCGGGCAGAA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACATGTCTTGGTTCCTGTaGGCGAGTGGGACGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYMSWFL*ASGTGG Trigger: GCCTCCCGTCCCACTCGCCCACAGGAACCAAGACAT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTAGGCAGGCTCCACTTTaGTCTCTGGTTGCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCRQAPL*SLVARL Trigger: CAGCCTGGCAACCAGAGACCAAAGTGGAGCCTGCCT...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTTGGCAGACAGGCCCTTaGGAAGGGTCTTCAGGTTGC | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCWQTGP*EGSSGC Trigger: GCAACCTGAAGACCCTTCCCAAGGGCCTGTCTGCCA...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCAGAATCCAGATCTaGGAGGCTGGCAGACAGGCC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLRIQI*EAGRQA Trigger: GGCCTGTCTGCCAGCCTCCCAGATCTGGATTCTGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTGTTGGAACCGAGGTaGCCCAGGAGGAACCTCCTG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLLEPR*PRRNLL Trigger: CAGGAGGTTCCTCCTGGGCCACCTCGGTTCCAACAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTCAGTAGGAACTTGTTaGAACCGAGGTGGCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALSVGTC*NRGGPG Trigger: TCCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGACCTGTAGCCTTCTTTaGCATCCTCCAGTGCGAGCT | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALTCSLL*HPPVRA Trigger: AGCTCGCACTGGAGGATGCCAAAGAAGGCTACAGGT...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTACTGGGTGTCGCTTGTaGTTGCCTTCCTCGCCCATG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFTGCRL*LPSSPM Trigger: CATGGGCGAGGAAGGCAACCACAAGCGACACCCAGT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGCTGGCTTGTCCATTTaGCATCTTCTCGAGTGGCCT | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALAGLSI*HLLEWP Trigger: AGGCCACTCGAGAAGATGCCAAATGGACAAGCCAGC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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3UTR CAA 72 bp | GACCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTaGTTCTGGAGTTGGGGAGATGTGCACACTGAGGAC | + |
Preference number: 4 (lower is better) Translates to: DLSCGHQWVFNP*FWSWGDVHTED Trigger: GTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGTCTTCTTGCTCATCCTaGTCCTTAGACATCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQSSCSS*SLDISC Trigger: GCAGCTGATGTCTAAGGATCAGGATGAGCAAGAAGA...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCTGGAACTTGGGCAGTaGCTGAGGGGTACAGCCATA | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCLELGQ*LRGTAI Trigger: TATGGCTGTACCCCTCAGTCACTGCCCAAGTTCCAG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTTTGGCATCCTCCAGTaGGAGCTGCTTGAACTCTTC | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALFGILQ*ELLELF Trigger: GAAGAGTTCAAGCAGCTCGCACTGGAGGATGCCAAA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAGGCTTGTGGGACTGTaGCTGCACACTTTTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFRLVGL*LHTFVG Trigger: GCCCACAAAAGTGTGCAGCCACAGTCCCACAAGCCT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTAGGCTTGTGGGACTGTaGCTGCACACTTTTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCRLVGL*LHTFVG Trigger: GCCCACAAAAGTGTGCAGCCACAGTCCCACAAGCCT...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGAGGCCAATTTCTCTCTaGGTACTTCGGGCTTCATGT | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQRPISL*VLRASC Trigger: ACATGAAGCCCGAAGTACCCAGAGAGAAATTGGCCT...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTTGGGGGTCCAGGCAGTaGCCACTTTTCAGGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCWGSRQ*PLFRFF Trigger: GAAGAACCTGAAAAGTGGCCACTGCCTGGACCCCCA...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCTCAGAATCCAGATCTaGGAGGCTGGCAGACAGGCC | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYLRIQI*EAGRQA Trigger: GGCCTGTCTGCCAGCCTCCCAGATCTGGATTCTGAG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGCTCCTCTGGCTTCTTaGGGCGTGCTGGTGAGGGTC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKAPLAS*GVLVRV Trigger: GACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTTGGCACGCGAAGTGTaGTTGCCTGTACGGTCTCCT | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCLAREV*LPVRSP Trigger: AGGAGACCGTACAGGCAACCACACTTCGCGTGCCAA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGACGGGCAATGGTAGATaGCTCGGGAGCACCAAACAG | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQTGNGR*LGSTKQ Trigger: CTGTTTGGTGCTCCCGAGCCATCTACCATTGCCCGT...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGAGACTCTGGGACAGTaGTTGGTAGAGAACGGGCAA | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRETLGQ*LVENGQ Trigger: TTGCCCGTTCTCTACCAACCACTGTCCCAGAGTCTC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGGGCATTTCGGTAGTTTaGAGACTCTGGGACAGTGGT | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALGISVV*RLWDSG Trigger: ACCACTGTCCCAGAGTCTCCAAACTACCGAAATGCC...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
||
CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGCAGTGGCAGGCCTGCTaGAAGACTGGGAAGGGCACC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKQWQAC*KTGKGT Trigger: GGTGCCCTTCCCAGTCTTCCAGCAGGCCTGCCACTG...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCTTCAGACCAGGCAGTaGAGGTATTCTTCCGCCCAT | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCLQTRQ*RYSSAH Trigger: ATGGGCGGAAGAATACCTTCACTGCCTGGTCTGAAG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAGGGTGTTCATCTCCTaGGACTGGCCAATGCCCAAG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYRVFIS*DWPMPK Trigger: CTTGGGCATTGGCCAGTCTCAGGAGATGAACACCCT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGTGTAGGCCAGTTGACTaGATCTCCAAAATCACCAAC | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGCRPVD*ISKITN Trigger: GTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACA...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTCATATACTTGTGGGTaGGGGGCCCCTCTGTACCAT | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCSYTCG*GAPLYH Trigger: ATGGTACAGAGGGGCCCCGCACCCACAAGTATATGA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTTTCCGCCCATCCATCTaGTCCATCTCCTCGTCAAAC | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCFRPSI*SISSSN Trigger: GTTTGACGAGGAGATGGAGCAGATGGATGGGCGGAA...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTCCGCCCATCCATCTaGTCCATCTCCTCGTCAAAC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFFRPSI*SISSSN Trigger: GTTTGACGAGGAGATGGAGCAGATGGATGGGCGGAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATTTGGCATCCTCCAGTaGGAGCTGCTTGAACTCTTC | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRFGILQ*ELLELF Trigger: GAAGAGTTCAAGCAGCTCGCACTGGAGGATGCCAAA...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGCTAAGCGGCGGAATTTaGCGAGGTATTCTTGCAGTT | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALLSGGI*RGILAV Trigger: AACTGCAAGAATACCTCGGCAAATTCCGCCGCTTAG...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTGTTTTTGTTGGCACTaGGGTGACTGCACGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQCFCWH*GDCTGR Trigger: TCTCCCCGTGCAGTCACCCCAGTGCCAACAAAAACA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTCTCCTCTGTTTTTGTTaGCACTGGGGTGACTGCACG | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCLLCFC*HWGDCT Trigger: CGTGCAGTCACCCCAGTGCCAACAAAAACAGAGGAG...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTCAGTAGGAACTTGTTaGAACCGAGGTGGCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCSVGTC*NRGGPG Trigger: TCCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTACCTGTAGCCTTCTTTaGCATCCTCCAGTGCGAGCT | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCTCSLL*HPPVRA Trigger: AGCTCGCACTGGAGGATGCCAAAGAAGGCTACAGGT...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAAGTGTGTCCGAGTGCTaGCTTGTCCATTTGGCATCT | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRSVSEC*LVHLAS Trigger: AGATGCCAAATGGACAAGCCAGCACTCGGACACACT...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAGGGCCTGTACACGGTaGAAGGAAGCAATAAGGGTG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYRACTR*KEAIRV Trigger: CACCCTTATTGCTTCCTTTCACCGTGTACAGGCCCT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGGGTCTTCAGGTTGCTaGCCTCCTCTGTTTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFGSSGC*PPLFLL Trigger: CAACAAAAACAGAGGAGGTCAGCAACCTGAAGACCC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCTTCAGACCAGGCAGTaGAGGTATTCTTCCGCCCAT | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYLQTRQ*RYSSAH Trigger: ATGGGCGGAAGAATACCTTCACTGCCTGGTCTGAAG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGTTTCCACTTCTTGCTTaGTCTGTGAATACTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGFPLLA*SVNTQA Trigger: AGCCTGAGTATTCACAGATCAAGCAAGAAGTGGAAA...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTTGCAGGTGTTCCCTCTaGAGGACTGGAGCTAATAGA | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCCRCSL*RTGANR Trigger: TCTATTAGCTCCAGTCCTTCAGAGGGAACACCTGCA...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTGCAGGTGTTCCCTCTaGAGGACTGGAGCTAATAGA | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQCRCSL*RTGANR Trigger: TCTATTAGCTCCAGTCCTTCAGAGGGAACACCTGCA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGCCAGTGCGAGCTGCTTaGACTCTTCATACATCTTTT | + |
Preference number: 4 (lower is better) Translates to: HTHTHSHPSSACVEMIALPVRAA*TLHTSF Trigger: AAAAGATGTATGAAGAGTTCAAGCAGCTCGCACTGG...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTCCTCCTGGAAATCCTTaGATATGTCCAGCCGGAACT | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCPPGNP*ICPAGT Trigger: AGTTCCGGCTGGACATATTCAAGGATTTCCAGGAGG...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTGTGGGACTGTGGCTaGACACTTTTGTGGGCTATC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLWDCG*TLLWAI Trigger: GATAGCCCACAAAAGTGTGCAGCCACAGTCCCACAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGGGCTTCATGTCTATTTaGAATGGAACCCACTTGTGT | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQGFMSI*NGTHLC Trigger: ACACAAGTGGGTTCCATTGCAAATAGACATGAAGCC...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTCATATACTTGTGGGTaGGGGGCCCCTCTGTACCAT | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYSYTCG*GAPLYH Trigger: ATGGTACAGAGGGGCCCCGCACCCACAAGTATATGA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCAGGTTCTTCCCTCCTaGGGACTTTCTCCTCAACCA | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYQVLPS*GLSPQP Trigger: TGGTTGAGGAGAAAGTCCGCAGGAGGGAAGAACCTG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGCTGCACACTTTTGTaGGCTATCTCTCCAGGTGTA | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGCTLL*AISPGV Trigger: TACACCTGGAGAGATAGCCCACAAAAGTGTGCAGCC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACACATGTCTATTTGCAATaGAACCCACTTGTGTTTGTT | + |
Preference number: 4 (lower is better) Translates to: EQGQAAFPPSSKSALRLTHVYLQ*NPLVFV Trigger: AACAAACACAAGTGGGTTCCATTGCAAATAGACATG...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071487.13 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGAGGCAGGCTCCACTTTaGTCTCTGGTTGCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKRQAPL*SLVARL Trigger: CAGCCTGGCAACCAGAGACCAAAGTGGAGCCTGCCT...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGGCAGACAGGCCCTTaGGAAGGGTCTTCAGGTTGC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKWQTGP*EGSSGC Trigger: GCAACCTGAAGACCCTTCCCAAGGGCCTGTCTGCCA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTGTTGGAACCGAGGTaGCCCAGGAGGAACCTCCTG | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKLLEPR*PRRNLL Trigger: CAGGAGGTTCCTCCTGGGCCACCTCGGTTCCAACAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGCATTTCGGTAGTTTaGAGACTCTGGGACAGTGGT | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGISVV*RLWDSG Trigger: ACCACTGTCCCAGAGTCTCCAAACTACCGAAATGCC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAGTGTGTCCGAGTGCTaGCTTGTCCATTTGGCATCT | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFSVSEC*LVHLAS Trigger: AGATGCCAAATGGACAAGCCAGCACTCGGACACACT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTCTTCTTGCTCATCCTaGTCCTTAGACATCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCSSCSS*SLDISC Trigger: GCAGCTGATGTCTAAGGATCAGGATGAGCAAGAAGA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGCTAAGCGGCGGAATTTaGCGAGGTATTCTTGCAGTT | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQLSGGI*RGILAV Trigger: AACTGCAAGAATACCTCGGCAAATTCCGCCGCTTAG...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTAGGCCAATTTCTCTCTaGGTACTTCGGGCTTCATGT | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFRPISL*VLRASC Trigger: ACATGAAGCCCGAAGTACCCAGAGAGAAATTGGCCT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGAAATCTCATTGCTGCTaGCATTGTCAAAGTAGTAAG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGKSHCC*HCQSSK Trigger: CTTACTACTTTGACAATGTCAGCAGCAATGAGATTT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGAGAAAAATCAGTTTGTaGATAATCCACTATTGGGGG | + |
Preference number: 4 (lower is better) Translates to: GSKFSSASAVTMAGGEGGRKISL*IIHYWG Trigger: CCCCCAATAGTGGATTATTCACAAACTGATTTTTCT...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTCAAACTCTGGGCAGTTaGGAAGCTGAGAAAAATCAG | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCQTLGS*EAEKNQ Trigger: CTGATTTTTCTCAGCTTCTCAACTGCCCAGAGTTTG...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGCATACATCTTTTTATTaGAGTGATCTCGGAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQHTSFY*SDLGGR Trigger: TCTTCCTCCGAGATCACTTCAATAAAAAGATGTATG...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTGTAGGCCAGTTGACTaGATCTCCAAAATCACCAAC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFCRPVD*ISKITN Trigger: GTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGTTTTTGTTGGCACTaGGGTGACTGCACGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKCFCWH*GDCTGR Trigger: TCTCCCCGTGCAGTCACCCCAGTGCCAACAAAAACA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCACAGGGTAAAACCGTaGTGTCTGACTAGAGTCTTT | + |
Preference number: 4 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCHRVKP*CLTRVF Trigger: AAAGACTCTAGTCAGACACCACGGTTTTACCCTGTG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGCTGGCTTGTCCATTTaGCATCTTCTCGAGTGGCCT | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKAGLSI*HLLEWP Trigger: AGGCCACTCGAGAAGATGCCAAATGGACAAGCCAGC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGACTAAATTGTCCACGCTaGAGTAATATTCAATCTGGC | + |
Preference number: 4 (lower is better) Translates to: PKLWTSVGVQPLVLELGRLNCPR*SNIQSG Trigger: GCCAGATTGAATATTACTTCAGCGTGGACAATTTAG...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTTAGAGCCGCAAAGATaGGTGAAATGTCAGTGGTTA | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQLEPQR*VKCQWL Trigger: TAACCACTGACATTTCACTCATCTTTGCGGCTCTAA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCCAGTGCGAGCTGCTTaGACTCTTCATACATCTTTT | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYPVRAA*TLHTSF Trigger: AAAAGATGTATGAAGAGTTCAAGCAGCTCGCACTGG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTGTGGGACTGTGGCTaGACACTTTTGTGGGCTATC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKLWDCG*TLLWAI Trigger: GATAGCCCACAAAAGTGTGCAGCCACAGTCCCACAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGGCTGCACACTTTTGTaGGCTATCTCTCCAGGTGTA | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKGCTLL*AISPGV Trigger: TACACCTGGAGAGATAGCCCACAAAAGTGTGCAGCC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCACAGGGTAAAACCGTaGTGTCTGACTAGAGTCTTT | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYHRVKP*CLTRVF Trigger: AAAGACTCTAGTCAGACACCACGGTTTTACCCTGTG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTTCACTGTCTCCTCCTaGAAATCCTTGAATATGTCC | + |
Preference number: 4 (lower is better) Translates to: VLNALSLMSRPSKQLAFFFTVSS*KSLNMS Trigger: GGACATATTCAAGGATTTCCAGGAGGAGACAGTGAA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGCTAAATTGTCCACGCTaGAGTAATATTCAATCTGGC | + |
Preference number: 4 (lower is better) Translates to: SSGISSAAQAVWLLKRSQLNCPR*SNIQSG Trigger: GCCAGATTGAATATTACTTCAGCGTGGACAATTTAG...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTCATACATCTTTTTATTaGAGTGATCTCGGAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: KLWTSVGVQPLVLELGRCHTSFY*SDLGGR Trigger: TCTTCCTCCGAGATCACTTCAATAAAAAGATGTATG...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAAATCTCATTGCTGCTaGCATTGTCAAAGTAGTAAG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYKSHCC*HCQSSK Trigger: CTTACTACTTTGACAATGTCAGCAGCAATGAGATTT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTAGAGCCGCAAAGATaGGTGAAATGTCAGTGGTTA | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKLEPQR*VKCQWL Trigger: TAACCACTGACATTTCACTCATCTTTGCGGCTCTAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACAGAAAAATCAGTTTGTaGATAATCCACTATTGGGGG | + |
Preference number: 4 (lower is better) Translates to: GISSAAQAVWLLKRSQVYRKISL*IIHYWG Trigger: CCCCCAATAGTGGATTATTCACAAACTGATTTTTCT...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR TCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTTCCACTTCTTGCTTaGTCTGTGAATACTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKFPLLA*SVNTQA Trigger: AGCCTGAGTATTCACAGATCAAGCAAGAAGTGGAAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR GCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGGGCTTCATGTCTATTTaGAATGGAACCCACTTGTGT | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKGFMSI*NGTHLC Trigger: ACACAAGTGGGTTCCATTGCAAATAGACATGAAGCC...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CCA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTTCACTGTCTCCTCCTaGAAATCCTTGAATATGTCC | + |
Preference number: 4 (lower is better) Translates to: TLREWYLFSTSLRSKVVKFTVSS*KSLNMS Trigger: GGACATATTCAAGGATTTCCAGGAGGAGACAGTGAA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | GACTCGGCCTGGGCGTCGGGCGCCGGCTTCTTCCTCGCCAGGCCGTaGTCCTCGGCCTGCAGCAGCGGGGCGCCCGCCGGCAGCAGCGGC | + |
Preference number: 5 (lower is better) Translates to: DSAWASGAGFFLARP*SSACSSGAPAGSSG Trigger: GCCGCTGCTGCCGGCGGGCGCCCCGCTGCTGCAGGCCGAGGAGCACGGCCTGGCGAGGAAGAAGCCGGCGCCCGACGCCCAGGCCGAGTC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | CCGCCGTCGGGCTCTCCGCCGCCGTCACCCGGGCCCGACTCGGCCTaGGCGTCGGGCGCCGGCTTCTTCCTCGCCAGGCCGTGCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: PPSGSPPPSPGPDSA*ASGAGFFLARPCSS Trigger: CGAGGAGCACGGCCTGGCGAGGAAGAAGCCGGCGCCCGACGCCCAGGCCGAGTCGGGCCCGGGTGACGGCGGCGGAGAGCCCGACGGCGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | CTCCACGAAGTCACGCCGGCCGCCGTCCTCGCCGTCGCTCCCCGCTaGGGCTTCCGCAGCTGCGGGTGGCCGCGGGCTCTCGCGCTCCGC | + |
Preference number: 5 (lower is better) Translates to: LHEVTPAAVLAVAPR*GFRSCGWPRALALR Trigger: GCGGAGCGCGAGAGCCCGCGGCCACCCGCAGCTGCGGAAGCCCCAGCGGGGAGCGACGGCGAGGACGGCGGCCGGCGTGACTTCGTGGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | CGGCGGCGGCGCGTGCTTCGTCCACGGGTTCACCTTGGGCGGCGGTaGCTCCACGAAGTCACGCCGGCCGCCGTCCTCGCCGTCGCTCCC | + |
Preference number: 5 (lower is better) Translates to: RRRRVLRPRVHLGRR*LHEVTPAAVLAVAP Trigger: GGGAGCGACGGCGAGGACGGCGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TCACCGCGGCCGGCGGCGGCGCGTGCTTCGTCCACGGGTTCACCTTaGGCGGCGGTGCCTCCACGAAGTCACGCCGGCCGCCGTCCTCGC | + |
Preference number: 5 (lower is better) Translates to: SPRPAAARASSTGSP*AAVPPRSHAGRRPR Trigger: GCGAGGACGGCGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGCCGCGGTGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | GGTTCTGGAGGCGGCTGTCCGTTCACCGCGGCCGGCGGCGGCGCGTaGTTCGTCCACGGGTTCACCTTGGGCGGCGGTGCCTCCACGAAG | + |
Preference number: 5 (lower is better) Translates to: GSGGGCPFTAAGGGA*FVHGFTLGGGASTK Trigger: CTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGCCGCGGTGAACGGACAGCCGCCTCCAGAACC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TTTAGGAGCAGCTGCCCTCACCACCTTGGCTGGAGCAGAAGGTTCTaGAGGCGGCTGTCCGTTCACCGCGGCCGGCGGCGGCGCGTGCTT | + |
Preference number: 5 (lower is better) Translates to: FRSSCPHHLGWSRRF*RRLSVHRGRRRRVL Trigger: AAGCACGCGCCGCCGCCGGCCGCGGTGAACGGACAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | GCTGCCCTTACGCGGTTTAGGAGCAGCTGCCCTCACCACCTTGGCTaGAGCAGAAGGTTCTGGAGGCGGCTGTCCGTTCACCGCGGCCGG | + |
Preference number: 5 (lower is better) Translates to: AALTRFRSSCPHHLG*SRRFWRRLSVHRGR Trigger: CCGGCCGCGGTGAACGGACAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCGCGTAAGGGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | GCTGGGAGGGAAGCTGCTGAGGCAGAGCAGTTGGGTGGGAGAACCTaGGCTCCTCTGGCTTCTTGGGGCGTGCTGGTGAGGGTCGAGGCC | + |
Preference number: 5 (lower is better) Translates to: AGREAAEAEQLGGRT*APLASWGVLVRVEA Trigger: GGCCTCGACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAACTGCTCTGCCTCAGCAGCTTCCCTCCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAGGGTGTCGCTTGTGGTaGCCTTCCTCGCCCATGGGG | + |
Preference number: 5 (lower is better) Translates to: EQGQAAFPPSSKSALRLTGCRLW*PSSPMG Trigger: CCCCATGGGCGAGGAAGGCAACCACAAGCGACACCC...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | CCACCAGCCCCATCACTCTTCACACTCGATGTCTCATCCTGGTCGTaGCAGGCAGGCTCCACTTTGGTCTCTGGTTGCCAGGCTGGGGTG | + |
Preference number: 5 (lower is better) Translates to: PPAPSLFTLDVSSWS*QAGSTLVSGCQAGV Trigger: CACCCCAGCCTGGCAACCAGAGACCAAAGTGGAGCCTGCCTGGCACGACCAGGATGAGACATCGAGTGTGAAGAGTGATGGGGCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | CGAGCCCCACCAGCCCCATCACTCTTCACACTCGATGTCTCATCCTaGTCGTGCCAGGCAGGCTCCACTTTGGTCTCTGGTTGCCAGGCT | + |
Preference number: 5 (lower is better) Translates to: RAPPAPSLFTLDVSS*SCQAGSTLVSGCQA Trigger: AGCCTGGCAACCAGAGACCAAAGTGGAGCCTGCCTGGCACGACCAGGATGAGACATCGAGTGTGAAGAGTGATGGGGCTGGTGGGGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGTCCACGGGTTCACCTaGGGCGGCGGTGCCTCCACG | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRVHGFT*GGGAST Trigger: CGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGAC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | CCAGGCAGGCTCCACTTTGGTCTCTGGTTGCCAGGCTGGGGTGGGTaGGGCCACAGATACAGGCATGTAGGTGGCAGGTTCAGATCCTTT | + |
Preference number: 5 (lower is better) Translates to: PGRLHFGLWLPGWGG*GHRYRHVGGRFRSF Trigger: AAAGGATCTGAACCTGCCACCTACATGCCTGTATCTGTGGCCCCACCCACCCCAGCCTGGCAACCAGAGACCAAAGTGGAGCCTGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | GAGGCAGAGCAGTTGGGTGGGAGAACCTGGGCTCCTCTGGCTTCTTaGGGCGTGCTGGTGAGGGTCGAGGCCTTTTCTTCACTTCAATCC | + |
Preference number: 5 (lower is better) Translates to: EAEQLGGRTWAPLAS*GVLVRVEAFSSLQS Trigger: GGATTGAAGTGAAGAAAAGGCCTCGACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAACTGCTCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTGTCCACGGGTTCACCTaGGGCGGCGGTGCCTCCACG | + |
Preference number: 5 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCVHGFT*GGGAST Trigger: CGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGAC...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGCACTTTGGTCTCTGGTaGCCAGGCTGGGGTGGGTGG | + |
Preference number: 5 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQHFGLW*PGWGGW Trigger: CCACCCACCCCAGCCTGGCAACCAGAGACCAAAGTG...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | TCCAAAATCACCAACCTTGCTGCCCTTACGCGGTTTAGGAGCAGCTaGCCTCACCACCTTGGCTGGAGCAGAAGGTTCTGGAGGCGGCTG | + |
Preference number: 5 (lower is better) Translates to: SKITNLAALTRFRSS*PHHLGWSRRFWRRL Trigger: CAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCGCGTAAGGGCAGCAAGGTTGGTGATTTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TCTCCCCACGGACAGCGGGTGTATGTCTTGGTTCCTGTGGGCGAGTaGGACGGGAGGCCAATTTCTCTCTGGGTACTTCGGGCTTCATGT | + |
Preference number: 5 (lower is better) Translates to: SPHGQRVYVLVPVGE*DGRPISLWVLRASC Trigger: ACATGAAGCCCGAAGTACCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TCCTTTCATCTCCCCACGGACAGCGGGTGTATGTCTTGGTTCCTGTaGGCGAGTGGGACGGGAGGCCAATTTCTCTCTGGGTACTTCGGG | + |
Preference number: 5 (lower is better) Translates to: SFHLPTDSGCMSWFL*ASGTGGQFLSGYFG Trigger: CCCGAAGTACCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGATGAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGCAGCGGGTGTATGTCTaGGTTCCTGTGGGCGAGTGG | + |
Preference number: 5 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQQRVYV*VPVGEW Trigger: CCACTCGCCCACAGGAACCAAGACATACACCCGCTG...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACAGTGAATAATCCACTATaGGGGGTCCAGGCAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: EQGQAAFPPSSKSALRLTVNNPL*GVQAVA Trigger: GGCCACTGCCTGGACCCCCAATAGTGGATTATTCAC...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | AGGTTCAGATCCTTTCATCTCCCCACGGACAGCGGGTGTATGTCTTaGTTCCTGTGGGCGAGTGGGACGGGAGGCCAATTTCTCTCTGGG | + |
Preference number: 5 (lower is better) Translates to: RFRSFHLPTDSGCMS*FLWASGTGGQFLSG Trigger: CCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGATGAAAGGATCTGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | GGGAAGGGTCTTCAGGTTGCTGACCTCCTCTGTTTTTGTTGGCACTaGGGTGACTGCACGGGGAGAGCCAGGTGCCGACTCTGTCTCTTT | + |
Preference number: 5 (lower is better) Translates to: GKGLQVADLLCFCWH*GDCTGRARCRLCLF Trigger: AAAGAGACAGAGTCGGCACCTGGCTCTCCCCGTGCAGTCACCCCAGTGCCAACAAAAACAGAGGAGGTCAGCAACCTGAAGACCCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGGTGTCGCTTGTGGTaGCCTTCCTCGCCCATGGGG | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGCRLW*PSSPMG Trigger: CCCCATGGGCGAGGAAGGCAACCACAAGCGACACCC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 90 bp | TCTCGGAGGAAGAAGGACCAAAAGCGGAAGAGGGTGTTCATCTCCTaGGACTGGCCAATGCCCAAGCGCTTCCGCTCATTAAGGCAGCGC | + |
Preference number: 5 (lower is better) Translates to: SRRKKDQKRKRVFIS*DWPMPKRFRSLRQR Trigger: GCGCTGCCTTAATGAGCGGAAGCGCTTGGGCATTGGCCAGTCTCAGGAGATGAACACCCTCTTCCGCTTTTGGTCCTTCTTCCTCCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TCAGTAGGAACTTGTTGGAACCGAGGTGGCCCAGGAGGAACCTCCTaGTTAGGATCCACAGGGGGCTCAGGGGTCAGAGTGTCAAACTGT | + |
Preference number: 5 (lower is better) Translates to: SVGTCWNRGGPGGTS*LGSTGGSGVRVSNC Trigger: ACAGTTTGACACTCTGACCCCTGAGCCCCCTGTGGATCCTAACCAGGAGGTTCCTCCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGCTGCCCTCACCACCTaGGCTGGAGCAGAAGGTTCT | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRAALTT*AGAEGS Trigger: AGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGCACCAAACAGCTTGTaGGCCAGGGCATCAGTAGGA | + |
Preference number: 5 (lower is better) Translates to: GSKFSSASAVTMAGGEGGAPNSL*ARASVG Trigger: TCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGGGAGCACCAAACAGCTaGTTGGCCAGGGCATCAGTA | + |
Preference number: 5 (lower is better) Translates to: GSKFSSASAVTMAGGEGGGAPNS*LARASV Trigger: TACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCC...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GAGCAGGGCCAGGCAGCCTTCCCTCCGAGTAGCAAATCTGCTCTGAGGCTCACATCTAAGCGGCGGAATTaGCCGAGGTATTCTTGCAGT | + |
Preference number: 5 (lower is better) Translates to: EQGQAAFPPSSKSALRLTSKRRN*PRYSCS Trigger: ACTGCAAGAATACCTCGGCAAATTCCGCCGCTTAGA...TGTGAGCCTCAGAGCAGATTTGCTACTCGGAGGGAAGGCTGCCTGGCCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTACCACTGGGTGTCGCTaGTGGTTGCCTTCCTCGCCC | + |
Preference number: 5 (lower is better) Translates to: KLWTSVGVQPLVLELGRCTTGCR*WLPSSP Trigger: GGGCGAGGAAGGCAACCACAAGCGACACCCAGTGGT...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTACCACTGGGTGTCGCTaGTGGTTGCCTTCCTCGCCC | + |
Preference number: 5 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCTTGCR*WLPSSP Trigger: GGGCGAGGAAGGCAACCACAAGCGACACCCAGTGGT...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGTGCTGGCTTGTCCATTaGGCATCTTCTCGAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: GSKFSSASAVTMAGGEGGCWLVH*ASSRVA Trigger: GGCCACTCGAGAAGATGCCAAATGGACAAGCCAGCA...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCTGCCCTCACCACCTaGGCTGGAGCAGAAGGTTCT | + |
Preference number: 5 (lower is better) Translates to: KLWTSVGVQPLVLELGRCAALTT*AGAEGS Trigger: AGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCACTTTGGTCTCTGGTaGCCAGGCTGGGGTGGGTGG | + |
Preference number: 5 (lower is better) Translates to: GISSAAQAVWLLKRSQVYHFGLW*PGWGGW Trigger: CCACCCACCCCAGCCTGGCAACCAGAGACCAAAGTG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGACCATCTCTACCACCTaGCTGTCCTTTAGAGCCGCA | + |
Preference number: 5 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQTISTT*LSFRAA Trigger: TGCGGCTCTAAAGGACAGCAAGGTGGTAGAGATGGT...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTGCTGGCTTGTCCATTaGGCATCTTCTCGAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: HTHTHSHPSSACVEMIALCWLVH*ASSRVA Trigger: GGCCACTCGAGAAGATGCCAAATGGACAAGCCAGCA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | TCGAGGCCTTTTCTTCACTTCAATCCAGCTCTCAGAATCCAGATCTaGGAGGCTGGCAGACAGGCCCTTGGGAAGGGTCTTCAGGTTGCT | + |
Preference number: 5 (lower is better) Translates to: SRPFLHFNPALRIQI*EAGRQALGKGLQVA Trigger: AGCAACCTGAAGACCCTTCCCAAGGGCCTGTCTGCCAGCCTCCCAGATCTGGATTCTGAGAGCTGGATTGAAGTGAAGAAAAGGCCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCTCAAAGTTTTCTTCTGCCTCTGCCGTAACCATGGCTGGAGGAGAGGGTGGGCCAGGTGTAGGCCAGTaGACTGCATCTCCAAAATCA | + |
Preference number: 5 (lower is better) Translates to: GSKFSSASAVTMAGGEGGPGVGQ*TASPKS Trigger: TGATTTTGGAGATGCAGTCAACTGGCCTACACCTGG...CCCACCCTCTCCTCCAGCCATGGTTACGGCAGAGGCAGAAGAAAACTTTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTGTGGCTGCACACTTTaGTGGGCTATCTCTCCAGGT | + |
Preference number: 5 (lower is better) Translates to: HTHTHSHPSSACVEMIALCGCTL*WAISPG Trigger: ACCTGGAGAGATAGCCCACAAAAGTGTGCAGCCACA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAATCAGTAGGAACTTGTaGGAACCGAGGTGGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRISRNL*EPRWPR Trigger: CCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGAT...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGCACCAAACAGCTTGTaGGCCAGGGCATCAGTAGGA | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRAPNSL*ARASVG Trigger: TCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGGTGAAGCCATTTTCCTaGAGCAGCTCATGGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQVKPFS*SSSWEG Trigger: TCCTTCCCATGAGCTGCTCAAGGAAAATGGCTTCAC...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 90 bp | GTCTTGGTTCCTGTGGGCGAGTGGGACGGGAGGCCAATTTCTCTCTaGGTACTTCGGGCTTCATGTCTATTTGCAATGGAACCCACTTGT | + |
Preference number: 5 (lower is better) Translates to: VLVPVGEWDGRPISL*VLRASCLFAMEPTC Trigger: ACAAGTGGGTTCCATTGCAAATAGACATGAAGCCCGAAGTACCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAATGTTGTTCATATACTaGTGGGTGCGGGGCCCCTCT | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRMLFIY*WVRGPS Trigger: AGAGGGGCCCCGCACCCACAAGTATATGAACAACAT...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGTGAATAATCCACTATaGGGGGTCCAGGCAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: KLWTSVGVQPLVLELGRCVNNPL*GVQAVA Trigger: GGCCACTGCCTGGACCCCCAATAGTGGATTATTCAC...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ATGATGGAAGTCATGGTGACAGGAGGGATGGGGTACTTGGAGGCTCCTGCCCAGCCATCATTAATGACCTaGGCCAGTTCAGCACTCATC | + |
Preference number: 5 (lower is better) Translates to: MMEVMVTGGMGYLEAPAQPSLMT*ASSALI Trigger: GATGAGTGCTGAACTGGCCAAGGTCATTAATGATGG...CTGGGCAGGAGCCTCCAAGTACCCCATCCCTCCTGTCACCATGACTTCCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTATCAGTAGGAACTTGTaGGAACCGAGGTGGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFISRNL*EPRWPR Trigger: CCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGAT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTGGAGCACCAAACAGCTaGTTGGCCAGGGCATCAGTA | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFGAPNS*LARASV Trigger: TACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCC...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGACTCTGGGACAGTGGTaGGTAGAGAACGGGCAATGG | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQTLGQW*VENGQW Trigger: CCATTGCCCGTTCTCTACCAACCACTGTCCCAGAGT...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 90 bp | TCTTGCTCCTTCATGTCCTTCTTAGGTGGCAACTTACGAGCAGGCTaGGGCTTGTGGGACTGTGGCTGCACACTTTTGTGGGCTATCTCT | + |
Preference number: 5 (lower is better) Translates to: SCSFMSFLGGNLRAG*GLWDCGCTLLWAIS Trigger: AGAGATAGCCCACAAAAGTGTGCAGCCACAGTCCCACAAGCCTCAGCCTGCTCGTAAGTTGCCACCTAAGAAGGACATGAAGGAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 90 bp | CTGCACACTTTTGTGGGCTATCTCTCCAGGTGTAGGCCAGTTGACTaGATCTCCAAAATCACCAACCTTGCTGCCCTTACGCGGTTTAGG | + |
Preference number: 5 (lower is better) Translates to: LHTFVGYLSRCRPVD*ISKITNLAALTRFR Trigger: CCTAAACCGCGTAAGGGCAGCAAGGTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACACCTGGAGAGATAGCCCACAAAAGTGTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTTGTGGCTGCACACTTTaGTGGGCTATCTCTCCAGGT | + |
Preference number: 5 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCCGCTL*WAISPG Trigger: ACCTGGAGAGATAGCCCACAAAAGTGTGCAGCCACA...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGCAGCGGGTGTATGTCTaGGTTCCTGTGGGCGAGTGG | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKQRVYV*VPVGEW Trigger: CCACTCGCCCACAGGAACCAAGACATACACCCGCTG...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTATGTTGTTCATATACTaGTGGGTGCGGGGCCCCTCT | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFMLFIY*WVRGPS Trigger: AGAGGGGCCCCGCACCCACAAGTATATGAACAACAT...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | AAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTACCATCTCTACCACCTaGCTGTCCTTTAGAGCCGCA | + |
Preference number: 5 (lower is better) Translates to: KLWTSVGVQPLVLELGRCTISTT*LSFRAA Trigger: TGCGGCTCTAAAGGACAGCAAGGTGGTAGAGATGGT...ACATCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGGTTCGAGCTGTGCCTaGTCTTTCTTTTTCGAGGCA | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRGSSCA*SFFFEA Trigger: TGCCTCGAAAAAGAAAGACAAGGCACAGCTCGAACC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 90 bp | GCCGCAAAGATGAGTGAAATGTCAGTGGTTAGGGCCTGTACACGGTaGAAGGAAGCAATAAGGGTGATGGGAAGGAAGCCATCAGCATCC | + |
Preference number: 5 (lower is better) Translates to: AAKMSEMSVVRACTR*KEAIRVMGRKPSAS Trigger: GGATGCTGATGGCTTCCTTCCCATCACCCTTATTGCTTCCTTTCACCGTGTACAGGCCCTAACCACTGACATTTCACTCATCTTTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGTCCATCTCCTTTCTCTaGCTCCTTCATGTCCTTCTT | + |
Preference number: 5 (lower is better) Translates to: HTHTHSHPSSACVEMIALSISFL*LLHVLL Trigger: AAGAAGGACATGAAGGAGCAAGAGAAAGGAGATGGA...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CCTAAGCTGTGGACATCAGTGGGTGTTCAACCCCTTGTTCTGGAGTTGGGGAGAGGGCTTCATGTCTATTaGCAATGGAACCCACTTGTG | + |
Preference number: 5 (lower is better) Translates to: PKLWTSVGVQPLVLELGRGLHVY*QWNPLV Trigger: CACAAGTGGGTTCCATTGCAAATAGACATGAAGCCC...TCTCCCCAACTCCAGAACAAGGGGTTGAACACCCACTGATGTCCACAGCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | CACACACACACACACTCCCACCCCTCCTCAGCCTGTGTTGAGATGATAGCCTTGCATGTAAGGTGGTGTTaGAGTGACGATGAGGATCTT | + |
Preference number: 5 (lower is better) Translates to: HTHTHSHPSSACVEMIALHVRWC*SDDEDL Trigger: AAGATCCTCATCGTCACTCAAACACCACCTTACATG...CAAGGCTATCATCTCAACACAGGCTGAGGAGGGGTGGGAGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACTGGCATTTCGGTAGTTaGGAGACTCTGGGACAGTGG | + |
Preference number: 5 (lower is better) Translates to: GISSAAQAVWLLKRSQVYWHFGS*ETLGQW Trigger: CCACTGTCCCAGAGTCTCCAAACTACCGAAATGCCA...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGTTCGAGCTGTGCCTaGTCTTTCTTTTTCGAGGCA | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGSSCA*SFFFEA Trigger: TGCCTCGAAAAAGAAAGACAAGGCACAGCTCGAACC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTCCTCCTGGAAATCCTaGAATATGTCCAGCCGGAAC | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQSSWKS*NMSSRN Trigger: GTTCCGGCTGGACATATTCAAGGATTTCCAGGAGGA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTCTAAGCGGCGGAATTaGCCGAGGTATTCTTGCAGT | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQSKRRN*PRYSCS Trigger: ACTGCAAGAATACCTCGGCAAATTCCGCCGCTTAGA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCTCAGTCCACAGGTCTaGTTCATAGTAGAAGAGTCC | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFLSPQV*FIVEES Trigger: GGACTCTTCTACTATGAACAAGACCTGTGGACTGAG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGACTCTGGGACAGTGGTaGGTAGAGAACGGGCAATGG | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKTLGQW*VENGQW Trigger: CCATTGCCCGTTCTCTACCAACCACTGTCCCAGAGT...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGTGAAGCCATTTTCCTaGAGCAGCTCATGGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: GISSAAQAVWLLKRSQVYVKPFS*SSSWEG Trigger: TCCTTCCCATGAGCTGCTCAAGGAAAATGGCTTCAC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTCCATCTCCTTTCTCTaGCTCCTTCATGTCCTTCTT | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQSISFL*LLHVLL Trigger: AAGAAGGACATGAAGGAGCAAGAGAAAGGAGATGGA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTCATCCGACTTTGTTTTaGGGCTCTCCTTACTATCAC | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFHPTLF*GSPYYH Trigger: GTGATAGTAAGGAGAGCCCAAAAACAAAGTCGGATG...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGGAACCCACTTGTGTTaGTTACCTTTCTTCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQGTHLC*LPFFFC Trigger: GCAGAAGAAGAAAGGTAACAAACACAAGTGGGTTCC...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071487.13 |
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CDS-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACGGGCTTCATGTCTATTaGCAATGGAACCCACTTGTG | + |
Preference number: 5 (lower is better) Translates to: GISSAAQAVWLLKRSQVYGLHVY*QWNPLV Trigger: CACAAGTGGGTTCCATTGCAAATAGACATGAAGCCC...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTGTTCAACCCCTTGTTCTGGAGTTGGGGAGATGTGCACACTGAGGACAAGTGTCATGTAAGGTGGTGTTaGAGTGACGATGAGGATCTT | + |
Preference number: 5 (lower is better) Translates to: VFNPLFWSWGDVHTEDKCHVRWC*SDDEDL Trigger: AAGATCCTCATCGTCACTCAAACACCACCTTACATG...ACACTTGTCCTCAGTGTGCACATCTCCCCAACTCCAGAACAAGGGGTTGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGGTATACCTCAGTCCACAGGTCTaGTTCATAGTAGAAGAGTCC | + |
Preference number: 5 (lower is better) Translates to: GISSAAQAVWLLKRSQVYLSPQV*FIVEES Trigger: GGACTCTTCTACTATGAACAAGACCTGTGGACTGAG...GTATACCTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGGCATTTCGGTAGTTaGGAGACTCTGGGACAGTGG | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKWHFGS*ETLGQW Trigger: CCACTGTCCCAGAGTCTCCAAACTACCGAAATGCCA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGGCATCTCAAGTGCAGCTCAGGCAGTCTGGCTTTTGAAGAGAAGTCAGTCCAGTGCGAGCTGCTaGAACTCTTCATACATCTTT | + |
Preference number: 5 (lower is better) Translates to: SSGISSAAQAVWLLKRSQSSASC*NSSYIF Trigger: AAAGATGTATGAAGAGTTCAAGCAGCTCGCACTGGA...CTGACTTCTCTTCAAAAGCCAGACTGCCTGAGCTGCACTTGAGATGCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | GTCCTCAATGCCCTTTCCCTCATGTCCAGACCTTCCAAGCAGCTTGCCTTCTTTTCCAGTGCGAGCTGCTaGAACTCTTCATACATCTTT | + |
Preference number: 5 (lower is better) Translates to: VLNALSLMSRPSKQLAFFSSASC*NSSYIF Trigger: AAAGATGTATGAAGAGTTCAAGCAGCTCGCACTGGA...AAAGAAGGCAAGCTGCTTGGAAGGTCTGGACATGAGGGAAAGGGCATTGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTCCTCCTGGAAATCCTaGAATATGTCCAGCCGGAAC | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKSSWKS*NMSSRN Trigger: GTTCCGGCTGGACATATTCAAGGATTTCCAGGAGGA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 90 bp | CTGTCTCTTTCTGGTAGTGCTGGCGGGGAACAAACTCTGGGCAGTTaGGAAGCTGAGAAAAATCAGTTTGTGAATAATCCACTATTGGGG | + |
Preference number: 5 (lower is better) Translates to: LSLSGSAGGEQTLGS*EAEKNQFVNNPLLG Trigger: CCCCAATAGTGGATTATTCACAAACTGATTTTTCTCAGCTTCTCAACTGCCCAGAGTTTGTTCCCCGCCAGCACTACCAGAAAGAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGCCATCATTAATGACCTaGGCCAGTTCAGCACTCATC | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKPSLMT*ASSALI Trigger: GATGAGTGCTGAACTGGCCAAGGTCATTAATGATGG...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGCAATGGAACCCACTaGTGTTTGCTCCCTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKCNGTH*CLLPFF Trigger: GAAGAAAGGGAGCAAACACAAGTGGGTTCCATTGCA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178636.2 |
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CDS-3UTR CAA 90 bp | ACCCTTAGAGAATGGTACCTTTTCTCCACCTCCTTGAGGTCAAAGGTCGTTAAGTGCAATGGAACCCACTaGTGTTTGTTACCTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TLREWYLFSTSLRSKVVKCNGTH*CLLPFF Trigger: GAAGAAAGGTAACAAACACAAGTGGGTTCCATTGCA...CTTAACGACCTTTGACCTCAAGGAGGTGGAGAAAAGGTACCATTCTCTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071487.13 |
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CDS TCA 90 bp | AATCATATTCACTTTCTTGAAGTTTTCCACTTCTTGCTTGATCTGTaGATACTCAGGCTCAAACTTCTCAGTCCACAGGTCTTGTTCATA | + |
Preference number: 5 (lower is better) Translates to: NHIHFLEVFHFLLDL*ILRLKLLSPQVLFI Trigger: TATGAACAAGACCTGTGGACTGAGAAGTTTGAGCCTGAGTATTCACAGATCAAGCAAGAAGTGGAAAACTTCAAGAAAGTGAATATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | GGCGGCTGTCCGTTCACCGCGGCCGGCGGCGGCGCGTaGTTCGTCCACGGGTTCACCTTGGGCGGCGGTGCC | + |
Preference number: 6 (lower is better) Translates to: GGCPFTAAGGGA*FVHGFTLGGGA Trigger: GGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGCCGCGGTGAACGGACAGCCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | TTCACCGCGGCCGGCGGCGGCGCGTGCTTCGTCCACGGGTTCACCTaGGGCGGCGGTGCCTCCACGAAGTCACGCCGGCCGCCGTCCTCG | + |
Preference number: 6 (lower is better) Translates to: FTAAGGGACFVHGFT*GGGASTKSRRPPSS Trigger: CGAGGACGGCGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGCCGCGGTGAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | CCGGCGGCGGCGCGTGCTTCGTCCACGGGTTCACCTTaGGCGGCGGTGCCTCCACGAAGTCACGCCGGCCGC | + |
Preference number: 6 (lower is better) Translates to: PAAARASSTGSP*AAVPPRSHAGR Trigger: GCGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | GCCGGCGGCGGCGCGTGCTTCGTCCACGGGTTCACCTaGGGCGGCGGTGCCTCCACGAAGTCACGCCGGCCG | + |
Preference number: 6 (lower is better) Translates to: AGGGACFVHGFT*GGGASTKSRRP Trigger: CGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCGCCGCCGCCGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | CGCGTGCTTCGTCCACGGGTTCACCTTGGGCGGCGGTaGCTCCACGAAGTCACGCCGGCCGCCGTCCTCGCC | + |
Preference number: 6 (lower is better) Translates to: RVLRPRVHLGRR*LHEVTPAAVLA Trigger: GGCGAGGACGGCGGCCGGCGTGACTTCGTGGAGGCACCGCCGCCCAAGGTGAACCCGTGGACGAAGCACGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | AGCTGCCCTCACCACCTTGGCTGGAGCAGAAGGTTCTaGAGGCGGCTGTCCGTTCACCGCGGCCGGCGGCGG | + |
Preference number: 6 (lower is better) Translates to: SCPHHLGWSRRF*RRLSVHRGRRR Trigger: CCGCCGCCGGCCGCGGTGAACGGACAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | TTCGGTAGCCAAACTGGTAGTCAAAGTGGGTTCGAGTaGCACCCCGTCCACGGCCCCGTCCACGACCACGCC | + |
Preference number: 6 (lower is better) Translates to: FGSQTGSQSGFE*HPVHGPVHDHA Trigger: GGCGTGGTCGTGGACGGGGCCGTGGACGGGGTGGCACTCGAACCCACTTTGACTACCAGTTTGGCTACCGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | GAAGCTGCTGAGGCAGAGCAGTTGGGTGGGAGAACCTaGGCTCCTCTGGCTTCTTGGGGCGTGCTGGTGAGG | + |
Preference number: 6 (lower is better) Translates to: EAAEAEQLGGRT*APLASWGVLVR Trigger: CCTCACCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAACTGCTCTGCCTCAGCAGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | TCTCGAGTGGCCTGGCCAGTAGGTGTCGTAGGGGGTTaGCTGATCCCAGTGGCAGGCCTGCTGGAAGACTGG | + |
Preference number: 6 (lower is better) Translates to: SRVAWPVGVVGG*LIPVAGLLEDW Trigger: CCAGTCTTCCAGCAGGCCTGCCACTGGGATCAGCCAACCCCCTACGACACCTACTGGCCAGGCCACTCGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | CCCTTACGCGGTTTAGGAGCAGCTGCCCTCACCACCTaGGCTGGAGCAGAAGGTTCTGGAGGCGGCTGTCCG | + |
Preference number: 6 (lower is better) Translates to: PLRGLGAAALTT*AGAEGSGGGCP Trigger: CGGACAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCGCGTAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | ACCTTGCTGCCCTTACGCGGTTTAGGAGCAGCTGCCCTCACCACCTaGGCTGGAGCAGAAGGTTCTGGAGGCGGCTGTCCGTTCACCGCG | + |
Preference number: 6 (lower is better) Translates to: TLLPLRGLGAAALTT*AGAEGSGGGCPFTA Trigger: CGCGGTGAACGGACAGCCGCCTCCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCGCGTAAGGGCAGCAAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | GCAGTTGGGTGGGAGAACCTGGGCTCCTCTGGCTTCTaGGGGCGTGCTGGTGAGGGTCGAGGCCTTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: AVGWENLGSSGF*GRAGEGRGLFF Trigger: GAAGAAAAGGCCTCGACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | TTCTCGAGTGGCCTGGCCAGTAGGTGTCGTAGGGGGTaGGCTGATCCCAGTGGCAGGCCTGCTGGAAGACTG | + |
Preference number: 6 (lower is better) Translates to: FSSGLASRCRRG*ADPSGRPAGRL Trigger: CAGTCTTCCAGCAGGCCTGCCACTGGGATCAGCCAACCCCCTACGACACCTACTGGCCAGGCCACTCGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | CAGTTGGGTGGGAGAACCTGGGCTCCTCTGGCTTCTTaGGGCGTGCTGGTGAGGGTCGAGGCCTTTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: QLGGRTWAPLAS*GVLVRVEAFSS Trigger: TGAAGAAAAGGCCTCGACCCTCACCAGCACGCCCCAAGAAGCCAGAGGAGCCCAGGTTCTCCCACCCAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | ACTTGTTGGAACCGAGGTGGCCCAGGAGGAACCTCCTaGTTAGGATCCACAGGGGGCTCAGGGGTCAGAGTG | + |
Preference number: 6 (lower is better) Translates to: TCWNRGGPGGTS*LGSTGGSGVRV Trigger: CACTCTGACCCCTGAGCCCCCTGTGGATCCTAACCAGGAGGTTCCTCCTGGGCCACCTCGGTTCCAACAAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | ACCAACCTTGCTGCCCTTACGCGGTTTAGGAGCAGCTaGCCTCACCACCTTGGCTGGAGCAGAAGGTTCTGG | + |
Preference number: 6 (lower is better) Translates to: TNLAALTRFRSS*PHHLGWSRRFW Trigger: CCAGAACCTTCTGCTCCAGCCAAGGTGGTGAGGGCAGCTGCTCCTAAACCGCGTAAGGGCAGCAAGGTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | CCAGTTCAGCACTCATCTTGGCACGCGAAGTGTGGTTaGCTGTACGGTCTCCTCCAGGGTGGCGACGCATGT | + |
Preference number: 6 (lower is better) Translates to: PVQHSSWHAKCG*LYGLLQGGDAC Trigger: ACATGCGTCGCCACCCTGGAGGAGACCGTACAGGCAACCACACTTCGCGTGCCAAGATGAGTGCTGAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | GGAACTTGGGCAGTGACTGAGGGGTACAGCCATAGCTaGCGACTGCAGGTGTTCCCTCTGAAGGACTGGAGC | + |
Preference number: 6 (lower is better) Translates to: GTWAVTEGYSHS*RLQVFPLKDWS Trigger: GCTCCAGTCCTTCAGAGGGAACACCTGCAGTCGGCAGCTATGGCTGTACCCCTCAGTCACTGCCCAAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | GGACAGCGGGTGTATGTCTTGGTTCCTGTGGGCGAGTaGGACGGGAGGCCAATTTCTCTCTGGGTACTTCGG | + |
Preference number: 6 (lower is better) Translates to: GQRVYVLVPVGE*DGRPISLWVLR Trigger: CCGAAGTACCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | GGCCAGGGCATCAGTAGGAACTTGTTGGAACCGAGGTaGCCCAGGAGGAACCTCCTGGTTAGGATCCACAGG | + |
Preference number: 6 (lower is better) Translates to: GQGISRNLLEPR*PRRNLLVRIHR Trigger: CCTGTGGATCCTAACCAGGAGGTTCCTCCTGGGCCACCTCGGTTCCAACAAGTTCCTACTGATGCCCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | TCCGGGGTGTGCGGGGAGTCCTGGCATTTCGGTAGTTaGGAGACTCTGGGACAGTGGTTGGTAGAGAACGGG | + |
Preference number: 6 (lower is better) Translates to: SGVCGESWHFGS*ETLGQWLVENG Trigger: CCCGTTCTCTACCAACCACTGTCCCAGAGTCTCCAAACTACCGAAATGCCAGGACTCCCCGCACACCCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | CAGGTTCAGATCCTTTCATCTCCCCACGGACAGCGGGTGTATGTCTaGGTTCCTGTGGGCGAGTGGGACGGGAGGCCAATTTCTCTCTGG | + |
Preference number: 6 (lower is better) Translates to: QVQILSSPHGQRVYV*VPVGEWDGRPISLW Trigger: CCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGATGAAAGGATCTGAACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | TCCTTTCATCTCCCCACGGACAGCGGGTGTATGTCTTaGTTCCTGTGGGCGAGTGGGACGGGAGGCCAATTT | + |
Preference number: 6 (lower is better) Translates to: SFHLPTDSGCMS*FLWASGTGGQF Trigger: AAATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGATGAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | CCAGCCCCATCACTCTTCACACTCGATGTCTCATCCTaGTCGTGCCAGGCAGGCTCCACTTTGGTCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: PAPSLFTLDVSS*SCQAGSTLVSG Trigger: ACCAGAGACCAAAGTGGAGCCTGCCTGGCACGACCAGGATGAGACATCGAGTGTGAAGAGTGATGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | ATCCTTTCATCTCCCCACGGACAGCGGGTGTATGTCTaGGTTCCTGTGGGCGAGTGGGACGGGAGGCCAATT | + |
Preference number: 6 (lower is better) Translates to: ILSSPHGQRVYV*VPVGEWDGRPI Trigger: AATTGGCCTCCCGTCCCACTCGCCCACAGGAACCAAGACATACACCCGCTGTCCGTGGGGAGATGAAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | AGAGAACGGGCAATGGTAGATGGCTCGGGAGCACCAAACAGCTTGTaGGCCAGGGCATCAGTAGGAACTTGTTGGAACCGAGGTGGCCCA | + |
Preference number: 6 (lower is better) Translates to: RERAMVDGSGAPNSL*ARASVGTCWNRGGP Trigger: TGGGCCACCTCGGTTCCAACAAGTTCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCCCGAGCCATCTACCATTGCCCGTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | GGTAGAGAACGGGCAATGGTAGATGGCTCGGGAGCACCAAACAGCTaGTTGGCCAGGGCATCAGTAGGAACTTGTTGGAACCGAGGTGGC | + |
Preference number: 6 (lower is better) Translates to: GRERAMVDGSGAPNS*LARASVGTCWNRGG Trigger: GCCACCTCGGTTCCAACAAGTTCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCCCGAGCCATCTACCATTGCCCGTTCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | ATCCAGCTCTCAGAATCCAGATCTGGGAGGCTGGCAGACAGGCCCTaGGGAAGGGTCTTCAGGTTGCTGACCTCCTCTGTTTTTGTTGGC | + |
Preference number: 6 (lower is better) Translates to: IQLSESRSGRLADRP*GRVFRLLTSSVFVG Trigger: GCCAACAAAAACAGAGGAGGTCAGCAACCTGAAGACCCTTCCCAAGGGCCTGTCTGCCAGCCTCCCAGATCTGGATTCTGAGAGCTGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | CGGGCAATGGTAGATGGCTCGGGAGCACCAAACAGCTaGTTGGCCAGGGCATCAGTAGGAACTTGTTGGAAC | + |
Preference number: 6 (lower is better) Translates to: RAMVDGSGAPNS*LARASVGTCWN Trigger: GTTCCAACAAGTTCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCCCGAGCCATCTACCATTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | CCTGTGGGCGAGTGGGACGGGAGGCCAATTTCTCTCTaGGTACTTCGGGCTTCATGTCTATTTGCAATGGAA | + |
Preference number: 6 (lower is better) Translates to: PVGEWDGRPISL*VLRASCLFAME Trigger: TTCCATTGCAAATAGACATGAAGCCCGAAGTACCCAGAGAGAAATTGGCCTCCCGTCCCACTCGCCCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | GTCTCCTCCAGGGTGGCGACGCATGTAAGGTGGTGTTaGAGTGACGATGAGGATCTTATTGACATCCCGGTC | + |
Preference number: 6 (lower is better) Translates to: VSSRVATHVRWC*SDDEDLIDIPV Trigger: GACCGGGATGTCAATAAGATCCTCATCGTCACTCAAACACCACCTTACATGCGTCGCCACCCTGGAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | GCAATGGTAGATGGCTCGGGAGCACCAAACAGCTTGTaGGCCAGGGCATCAGTAGGAACTTGTTGGAACCGA | + |
Preference number: 6 (lower is better) Translates to: AMVDGSGAPNSL*ARASVGTCWNR Trigger: TCGGTTCCAACAAGTTCCTACTGATGCCCTGGCCAACAAGCTGTTTGGTGCTCCCGAGCCATCTACCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | TGTGGCTGCACACTTTTGTGGGCTATCTCTCCAGGTGTAGGCCAGTaGACTGCATCTCCAAAATCACCAACCTTGCTGCCCTTACGCGGT | + |
Preference number: 6 (lower is better) Translates to: CGCTLLWAISPGVGQ*TASPKSPTLLPLRG Trigger: ACCGCGTAAGGGCAGCAAGGTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACACCTGGAGAGATAGCCCACAAAAGTGTGCAGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 72 bp | TTCATGTCCTTCTTAGGTGGCAACTTACGAGCAGGCTaGGGCTTGTGGGACTGTGGCTGCACACTTTTGTGG | + |
Preference number: 6 (lower is better) Translates to: FMSFLGGNLRAG*GLWDCGCTLLW Trigger: CCACAAAAGTGTGCAGCCACAGTCCCACAAGCCTCAGCCTGCTCGTAAGTTGCCACCTAAGAAGGACATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | CCATCATTAATGACCTTGGCCAGTTCAGCACTCATCTaGGCACGCGAAGTGTGGTTGCCTGTACGGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: PSLMTLASSALI*AREVWLPVRSP Trigger: AGGAGACCGTACAGGCAACCACACTTCGCGTGCCAAGATGAGTGCTGAACTGGCCAAGGTCATTAATGATGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | TTTGTGGGCTATCTCTCCAGGTGTAGGCCAGTTGACTaGATCTCCAAAATCACCAACCTTGCTGCCCTTACG | + |
Preference number: 6 (lower is better) Translates to: FVGYLSRCRPVD*ISKITNLAALT Trigger: CGTAAGGGCAGCAAGGTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACACCTGGAGAGATAGCCCACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CCA 72 bp | TGTACGGTCTCCTCCAGGGTGGCGACGCATGTAAGGTaGTGTTTGAGTGACGATGAGGATCTTATTGACATC | + |
Preference number: 6 (lower is better) Translates to: CTVSSRVATHVR*CLSDDEDLIDI Trigger: GATGTCAATAAGATCCTCATCGTCACTCAAACACCACCTTACATGCGTCGCCACCCTGGAGGAGACCGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | ACACTTTTGTGGGCTATCTCTCCAGGTGTAGGCCAGTaGACTGCATCTCCAAAATCACCAACCTTGCTGCCC | + |
Preference number: 6 (lower is better) Translates to: TLLWAISPGVGQ*TASPKSPTLLP Trigger: GGGCAGCAAGGTTGGTGATTTTGGAGATGCAGTCAACTGGCCTACACCTGGAGAGATAGCCCACAAAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | GACCAGGCAGTGAAGGTATTCTTCCGCCCATCCATCTaGTCCATCTCCTCGTCAAACAGAAAGTCTAGTTCT | + |
Preference number: 6 (lower is better) Translates to: DQAVKVFFRPSI*SISSSNRKSSS Trigger: AGAACTAGACTTTCTGTTTGACGAGGAGATGGAGCAGATGGATGGGCGGAAGAATACCTTCACTGCCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 72 bp | ATGAGTGAAATGTCAGTGGTTAGGGCCTGTACACGGTaGAAGGAAGCAATAAGGGTGATGGGAAGGAAGCCA | + |
Preference number: 6 (lower is better) Translates to: MSEMSVVRACTR*KEAIRVMGRKP Trigger: TGGCTTCCTTCCCATCACCCTTATTGCTTCCTTTCACCGTGTACAGGCCCTAACCACTGACATTTCACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 72 bp | CAATTTCATAGTCAGAGTCCTCTTCAGACCAGGCAGTaGAGGTATTCTTCCGCCCATCCATCTGCTCCATCT | + |
Preference number: 6 (lower is better) Translates to: QFHSQSPLQTRQ*RYSSAHPSAPS Trigger: AGATGGAGCAGATGGATGGGCGGAAGAATACCTTCACTGCCTGGTCTGAAGAGGACTCTGACTATGAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 72 bp | TCTGGTAGTGCTGGCGGGGAACAAACTCTGGGCAGTTaGGAAGCTGAGAAAAATCAGTTTGTGAATAATCCA | + |
Preference number: 6 (lower is better) Translates to: SGSAGGEQTLGS*EAEKNQFVNNP Trigger: TGGATTATTCACAAACTGATTTTTCTCAGCTTCTCAACTGCCCAGAGTTTGTTCCCCGCCAGCACTACCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS TCA 72 bp | CCTCATAGTCCTTCACTGTCTCCTCCTGGAAATCCTTaGATATGTCCAGCCGGAACTTTTTCTCTAGACCAT | + |
Preference number: 6 (lower is better) Translates to: PHSPSLSPPGNP*ICPAGTFSLDH Trigger: ATGGTCTAGAGAAAAAGTTCCGGCTGGACATATTCAAGGATTTCCAGGAGGAGACAGTGAAGGACTATGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | CAAACCGTACCTGTAGCCTTCTTTGGCATCCTCCAGTaGGAGCTGCTTGAACTCTTCATACATCTTTTTATT | + |
Preference number: 6 (lower is better) Translates to: QTVPVAFFGILQ*ELLELFIHLFI Trigger: AATAAAAAGATGTATGAAGAGTTCAAGCAGCTCGCACTGGAGGATGCCAAAGAAGGCTACAGGTACGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS GCA 72 bp | AATTTCTCTCTGGGTACTTCGGGCTTCATGTCTATTTaGAATGGAACCCACTTGTGTTTGCTCCCTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: NFSLGTSGFMSI*NGTHLCLLPFF Trigger: GAAGAAAGGGAGCAAACACAAGTGGGTTCCATTGCAAATAGACATGAAGCCCGAAGTACCCAGAGAGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178636.2 |
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CDS CCA 72 bp | CTCTCTGGGTACTTCGGGCTTCATGTCTATTTGCAATaGAACCCACTTGTGTTTGTTACCTTTCTTCTTCTG | + |
Preference number: 6 (lower is better) Translates to: LSGYFGLHVYLQ*NPLVFVTFLLL Trigger: CAGAAGAAGAAAGGTAACAAACACAAGTGGGTTCCATTGCAAATAGACATGAAGCCCGAAGTACCCAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071487.13 |
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CDS CAA 72 bp | CAATTTCTCTCTGGGTACTTCGGGCTTCATGTCTATTaGCAATGGAACCCACTTGTGTTTGCTCCCTTTCTT | + |
Preference number: 6 (lower is better) Translates to: QFLSGYFGLHVY*QWNPLVFAPFL Trigger: AAGAAAGGGAGCAAACACAAGTGGGTTCCATTGCAAATAGACATGAAGCCCGAAGTACCCAGAGAGAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178636.2 |
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CDS TCA 72 bp | CACTTTCTTGAAGTTTTCCACTTCTTGCTTGATCTGTaGATACTCAGGCTCAAACTTCTCAGTCCACAGGTC | + |
Preference number: 6 (lower is better) Translates to: HFLEVFHFLLDL*ILRLKLLSPQV Trigger: GACCTGTGGACTGAGAAGTTTGAGCCTGAGTATTCACAGATCAAGCAAGAAGTGGAAAACTTCAAGAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 90 bp | GGGGTCAGAGTGTCAAACTGTTCCCGACTAATCATATTCACTTTCTaGAAGTTTTCCACTTCTTGCTTGATCTGTGAATACTCAGGCTCA | + |
Preference number: 6 (lower is better) Translates to: GVRVSNCSRLIIFTF*KFSTSCLICEYSGS Trigger: TGAGCCTGAGTATTCACAGATCAAGCAAGAAGTGGAAAACTTCAAGAAAGTGAATATGATTAGTCGGGAACAGTTTGACACTCTGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |
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CDS CAA 72 bp | GTGTCAAACTGTTCCCGACTAATCATATTCACTTTCTaGAAGTTTTCCACTTCTTGCTTGATCTGTGAATAC | + |
Preference number: 6 (lower is better) Translates to: VSNCSRLIIFTF*KFSTSCLICEY Trigger: GTATTCACAGATCAAGCAAGAAGTGGAAAACTTCAAGAAAGTGAATATGATTAGTCGGGAACAGTTTGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071487.13 ENSMUST00000178636.2 |