Pregenerated sensors for LARGE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040434Ensembl transcript IDs: ENSMUST00000068586.13, ENSMUST00000090582.11, ENSMUST00000111284.9, ENSMUST00000148352.8, ENSMUST00000176289.8, ENSMUST00000176339.2, ENSMUST00000176774.8, ENSMUST00000176810.8
Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGTCAGCTGCTTCCAGGTAGCAGCGCTCAGCCCGAGTGTGGTCTaGCAGCTGCACGTTCCAGACACAGGGCAGGGGGTGCACCAGATG | + |
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Preference number: 1 (lower is better) Translates to: EVSCFQVAALSPSVV*QLHVPDTGQGVHQM Trigger: CATCTGGTGCACCCCCTGCCCTGTGTCTGGAACGTGCAGCTGTCAGACCACACTCGGGCTGAGCGCTGCTACCTGGAAGCAGCTGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR TCA 90 bp | CAGCGGGGTAAGCTCAGGCCCGACTTCGGGCCTGCTGCAGGGCAGTaGGGTATTTCAGGGCTGCAGACCCATAGCGCCTTGACAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: QRGKLRPDFGPAAGQ*GISGLQTHSALTSP Trigger: AGGACTTGTCAAGGCGCTATGGGTCTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCGGGCCTGAGCTTACCCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR GCA 90 bp | GGCTGGTGGGGCAGGAAGGTGATGTGCACCCGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAGCAGGGCTCTTCCTCATCCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: GWWGRKVMCTRCTVS*CWRNSKQGSSSSSC Trigger: ACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTTCCTGCCCCACCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | GTTGCGGTAGGTGGGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACCAG | + |
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Preference number: 1 (lower is better) Translates to: VAVGGAGAEAGDVKT*SVGQVDREGLRKYQ Trigger: CTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCCCACCTACCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR GCA 90 bp | GCCATCAGAGTGAGCAGCTCTCGTTTGGCTGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGGAGCCTGTCCAGCCACAGCAGGATC | + |
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Preference number: 1 (lower is better) Translates to: AIRVSSSRLAVTFHI*SQPVCWSLSSHSRI Trigger: GATCCTGCTGTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCACTCTGATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR GCA 90 bp | AAGCAGGGCTCTTCCTCATCCAGCTGTGTTAGGGCCTGTTGCAACTaGTCGGCCCCAGGAGGGAACTGGTTGGGGCATCCAAAGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KQGSSSSSCVRACCN*SAPGGNWLGHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCTAACACAGCTGGATGAGGAAGAGCCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | TGGGGCAGGAAGGTGATGTGCACCCGGTGCACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGCTCTTCCTCATCCAGCTGTGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: WGRKVMCTRCTVSCC*RNSKQGSSSSSCVR Trigger: CCTAACACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTTCCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR TCA 90 bp | ACTGTATGGTGCCTGGGCTTCCCGCCAGCGGGAATAGTCTGTGGATaGGTGACCCTGTGGCCACTCGTGGTACCTAAAGGTGTGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TVWCLGFPPAGIVCG*VTLWPLVVPKGVKG Trigger: TCCCTTCACACCTTTAGGTACCACGAGTGGCCACAGGGTCACTCATCCACAGACTATTCCCGCTGGCGGGAAGCCCAGGCACCATACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR GCA 90 bp | ATAATCTCTCGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATCTGGCATCCGAGCGGAGGTGGGGATGGGGAGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: IISRLELYPAHTIAT*NIWHPSGGGDGEKG Trigger: CCCCTTCTCCCCATCCCCACCTCCGCTCGGATGCCAGATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| 3UTR GCA 90 bp | AACTCAAAGCAGGGCTCTTCCTCATCCAGCTGTGTTAGGGCCTGTTaGAACTGCTCGGCCCCAGGAGGGAACTGGTTGGGGCATCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: NSKQGSSSSSCVRAC*NCSAPGGNWLGHPK Trigger: CTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCTAACACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | CGCACACACGATAGCCACATGCAACATCTGGCATCCGAGCGGAGGTaGGGATGGGGAGAAGGGGTGCCTAGATGCAACGCCTCAATTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RTHDSHMQHLASERR*GWGEGVPRCNASIS Trigger: TGAAATTGAGGCGTTGCATCTAGGCACCCCTTCTCCCCATCCCCACCTCCGCTCGGATGCCAGATGTTGCATGTGGCTATCGTGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| 3UTR CCA 90 bp | GTGTTAGGGCCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTGGTTaGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCCCATCATACC | + |
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Preference number: 1 (lower is better) Translates to: VLGPVATARPQEGTG*GIQRALFAVASHHT Trigger: GGTATGATGGGAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCTAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | AGCTGTGTTAGGGCCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCCCATCA | + |
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Preference number: 1 (lower is better) Translates to: SCVRACCNCSAPGGN*LGHPKSSLRSSFPS Trigger: TGATGGGAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCTAACACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | CAGGGGCTTGAGTTCTTCCGCATCATAGAAGCTGACCACCACCGCTaGCACCATCCATGTTCGGAAGAGTGTCTCCAGGATGTTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QGLEFFRIIEADHHR*HHPCSEECLQDVSG Trigger: GCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATGGTGCCAGCGGTGGTGGTCAGCTTCTATGATGCGGAAGAACTCAAGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | TCTCGTTTGGCTGTCACCTTCCACATCTGCTCCCAGCCAGTTTGCTaGAGCCTGTCCAGCCACAGCAGGATCACACCTGTGTTAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: SRLAVTFHICSQPVC*SLSSHSRITPVLNP Trigger: GGGATTTAACACAGGTGTGATCCTGCTGTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR GCA 90 bp | AGCTCTCGTTTGGCTGTCACCTTCCACATCTGCTCCCAGCCAGTTTaGTGGAGCCTGTCCAGCCACAGCAGGATCACACCTGTGTTAAAT | + |
|
Preference number: 1 (lower is better) Translates to: SSRLAVTFHICSQPV*WSLSSHSRITPVLN Trigger: ATTTAACACAGGTGTGATCCTGCTGTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | TGCACCAGATGGGGGTGCTCCTTGATGACCGCATTGAAGATGTCCTaGTCAGCCAAGGAAGTAGCCATCAGAGTGAGCAGCTCTCGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: CTRWGCSLMTALKMS*SAKEVAIRVSSSRL Trigger: CAAACGAGAGCTGCTCACTCTGATGGCTACTTCCTTGGCTGACCAGGACATCTTCAATGCGGTCATCAAGGAGCACCCCCATCTGGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR TCA 90 bp | TGTTCTTCACTCGAAGCTTCTTTGGTGAATTCCAGTGGATCACTTTaGGGTCAGCTGCTTCCAGGTAGCAGCGCTCAGCCCGAGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: CSSLEASLVNSSGSL*GQLLPGSSAQPECG Trigger: ACCACACTCGGGCTGAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGAAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CCA 90 bp | CCGGTACACTACATGGTAGGCCACATCCTTCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATGAAGAAATTGTTGAGCCTCTTCATC | + |
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Preference number: 1 (lower is better) Translates to: PVHYMVGHILPHREH*RRFHKMKKLLSLFI Trigger: GATGAAGAGGCTCAACAATTTCTTCATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGGAAGGATGTGGCCTACCATGTAGTGTACCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTGGAGCGTGGGGCAAGTGGATGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GAGAEAGDVKTWSVGQVDVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCAAATCCCACAAAGCGAGGATCATAACGGGGGCAGTCACGGGGTACCACGGTGGGGCAGGAAGGTaGTGTGCACCCGGTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: PAKSHKARIITGAVTGYHGGAGR*CAPGAQ Trigger: CTGTGCACCGGGTGCACATCACCTTCCTGCCCCACC...GTGGTACCCCGTGACTGCCCCCGTTATGATCCTCGCTTTGTGGGATTTGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGGAGGGAACTGGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCGCATCCGAGCGGAGGTaGGGATGGGGAGAAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: APGGNWLGHPKSSLRSSFASERR*GWGEGV Trigger: CACCCCTTCTCCCCATCCCCACCTCCGCTCGGATGC...GAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGGGGCAGTCACGGGGTACCACCACGTAGGGTTCATAGTCAGCTGACCACTGAGCGGAGGTGGGGATaGGGAGAAGGGGTGCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: NGGSHGVPPRRVHSQLTTERRWG*GEGVPR Trigger: TCTAGGCACCCCTTCTCCCCATCCCCACCTCCGCTC...AGTGGTCAGCTGACTATGAACCCTACGTGGTGGTACCCCGTGACTGCCCCCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTGGAGCGTGGGGCAAGTGGATAGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLERKREMSRLGAWGKWIAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...TATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCCCGACTTCGGGCCTGCTGCAGGGCAGTGAGGTATTTCAGGGCTGCAGACGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SGPTSGLLQGSEVFQGCRRCTVS*CWRNSK Trigger: CTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCG...TCTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCGGGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCACAGGGCTTCCAGCATCTGCAGCCGGTCCATAGAGAGTTGGGCCACCAAGGTGATGTGCACCCGGTaGACAGTGAGCTGCTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LHRASSICSRSIESWATKVMCTR*TVSCCW Trigger: CCAACAGCAGCTCACTGTGCACCGGGTGCACATCAC...CTTGGTGGCCCAACTCTCTATGGACCGGCTGCAGATGCTGGAAGCCCTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAAATCCCACAAAGCGAGGATCATAACGGGGGCAGTCACGGGGTACCACGCAGGCCAGGGCCTATaGTTCTTCCAGAGGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: PAKSHKARIITGAVTGYHAGQGL*FFQRLP Trigger: GGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGC...GTGGTACCCCGTGACTGCCCCCGTTATGATCCTCGCTTTGTGGGATTTGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CAA 90 bp | ACGTTCCAGACACAGGGCAGGGGGTGCACCAGATGGGGGTGCTCCTaGATGACCGCATTGAAGATGTCCTGGTCAGCCAAGGAAGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: TFQTQGRGCTRWGCS*MTALKMSWSAKEVA Trigger: GGCTACTTCCTTGGCTGACCAGGACATCTTCAATGCGGTCATCAAGGAGCACCCCCATCTGGTGCACCCCCTGCCCTGTGTCTGGAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTGGAGCGTGGGGCAAGTGGATAGGCTGGGAGGCAGGATaGTGGGAAGTACTAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLERKREMSRLGAWGKWIGWEAG*WEVLAS Trigger: TGAAGCTAGTACTTCCCAGCATCCTGCCTCCCAGCC...TATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGAGGTACCAGTCGCTCTaGTTCTCCACGAGACCGACC | + |
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Preference number: 2 (lower is better) Translates to: PKPAEAKEGWIPVWISRRRYQSL*FSTRPT Trigger: GGTCGGTCTCGTGGAGAACCAGAGCGACTGGTACCT...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAATGCAGGCACCACCAAAGCAGTCTTGCGCCGACTGTCCAGCTCCAGCTGCGGCTGGGAGGCAGGATaGTGGGAAGTACTAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SNAGTTKAVLRRLSSSSCGWEAG*WEVLAS Trigger: TGAAGCTAGTACTTCCCAGCATCCTGCCTCCCAGCC...GCAGCTGGAGCTGGACAGTCGGCGCAAGACTGCTTTGGTGGTGCCTGCATTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACAAAGCGAGGATCATAACGGGGGCAGTCACGGGGTACCACCACGTAGGACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: IPQSEDHNGGSHGVPPRRTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...CCTACGTGGTGGTACCCCGTGACTGCCCCCGTTATGATCCTCGCTTTGTGGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PKPAEAKEGWIPVWISRRTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACCAGGAATTCATATGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: GAWGKWIEKASGSTRNSYGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...ATATGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CAA 90 bp | TGTGTTAGGGCCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCCCATCATAC | + |
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Preference number: 2 (lower is better) Translates to: CVRACCNCSAPGGNW*GHPKSSLRSSFPSY Trigger: GTATGATGGGAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCTAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR CAA 90 bp | CAGCTCTCGTTTGGCTGTCACCTTCCACATCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCACAGCAGGATCACACCTGTGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: QLSFGCHLPHLLPAS*LEPVQPQQDHTCVK Trigger: TTTAACACAGGTGTGATCCTGCTGTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGCCCCAGGAGGGAACTGGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTGCTTGTCAGAAAAATaGTCAAAGAGTGCCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SAPGGNWLGHPKSSLRSSCLSEK*SKSAQS Trigger: GCTCTGGGCACTCTTTGATCATTTTTCTGACAAGCA...GCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACCAGGAATTCATATCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GAWGKWIEKASGSTRNSYLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...ATATGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACAAAGCGAGGATCATAACGGGGGCAGTCACGGGGTACCACCACGTAGGTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
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Preference number: 2 (lower is better) Translates to: IPQSEDHNGGSHGVPPRRWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...CCTACGTGGTGGTACCCCGTGACTGCCCCCGTTATGATCCTCGCTTTGTGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGTGGACCGTCCCGGTACACTACATGGTAGGCCACATCCTTCCTCATAGACGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: IEWTVPVHYMVGHILPHRRCTVS*CWRNSK Trigger: CTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCG...TCTATGAGGAAGGATGTGGCCTACCATGTAGTGTACCGGGACGGTCCACTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACCAGGAATTCATATCGGTCCATAGAGAGTTaGGCCACCAAGGTGACATCG | + |
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Preference number: 2 (lower is better) Translates to: GAWGKWIEKASGSTRNSYRSIES*ATKVTS Trigger: CGATGTCACCTTGGTGGCCCAACTCTCTATGGACCG...ATATGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGGATCACTTTGAGGTCAGCTGCTTCCAGGTAGCAGCGCTCAGCCCGAGTAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
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Preference number: 2 (lower is better) Translates to: PVDHFEVSCFQVAALSPSKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...ACTCGGGCTGAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTGATCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR CCA 90 bp | CACTACATGGTAGGCCACATCCTTCCTCATAGAGAGCACTGGCGACGTTTCCACTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
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Preference number: 2 (lower is better) Translates to: HYMVGHILPHREHWRRFHWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...GTGGAAACGTCGCCAGTGCTCTCTATGAGGAAGGATGTGGCCTACCATGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGACCGTCCCGGTACACTACATGGTAGGCCACATCCTTCCTCATAGAGAGATTACGGAAGAATTCTaGGTGCTTGTTCTTCACTCG | + |
|
Preference number: 2 (lower is better) Translates to: EWTVPVHYMVGHILPHREITEEF*VLVLHS Trigger: CGAGTGAAGAACAAGCACGCAGAATTCTTCCGTAAT...CTCTCTATGAGGAAGGATGTGGCCTACCATGTAGTGTACCGGGACGGTCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CAA 90 bp | CTTCCTCATAGAGAGCACTGGCGACGTTTCCACAAAATGAAGAAATaGTTGAGCCTCTTCATCTGTCAGGTACAAGGCCAGGCTCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPHREHWRRFHKMKK*LSLFICQVQGQAHG Trigger: CCCATGAGCCTGGCCTTGTACCTGACAGATGAAGAGGCTCAACAATTTCTTCATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCAGGCTCATGGGGCCTaGCCAGTGCCTGCACAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRQAHGA*PVPAQG Trigger: GCCCTGTGCAGGCACTGGCCAGGCCCCATGAGCCTG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGAGTGGACCGTCCCGGTACACTACATGGTAGGCCACATCCTTCCTCATAGAAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: IEWTVPVHYMVGHILPHRKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...TCTATGAGGAAGGATGTGGCCTACCATGTAGTGTACCGGGACGGTCCACTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCCTCAATTTCATAAGTaGGGAATTAGAACAGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRPQFHK*GIRTGV Trigger: CACTCCTGTTCTAATTCCTCACTTATGAAATTGAGG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR GCA 72 bp | GGCGGCTGGTGGGGCAGGAAGGTGATGTGCACCCGGTaGACAGTGAGCTGCTGTTGGCGGAACTCAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGWWGRKVMCTR*TVSCCWRNSKQ Trigger: CTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTTCCTGCCCCACCAGCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGGCCCCAGGAGGGAACTGGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAPGGNWLGHPKSSLRSSLLPAS*LEPVQP Trigger: TGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAG...GCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | AAGCTCAGGCCCGACTTCGGGCCTGCTGCAGGGCAGTaGGGTATTTCAGGGCTGCAGACCCATAGCGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KLRPDFGPAAGQ*GISGLQTHSAL Trigger: CAAGGCGCTATGGGTCTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCGGGCCTGAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | GGTGGGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGAGAEAGDVKT*SVGQVDREGLR Trigger: CCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR GCA 72 bp | CGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATCTGGCATCCGAGCGGAGGTGGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLELYPAHTIAT*NIWHPSGGGDG Trigger: CCCATCCCCACCTCCGCTCGGATGCCAGATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR CCA 72 bp | GATAGCCACATGCAACATCTGGCATCCGAGCGGAGGTaGGGATGGGGAGAAGGGGTGCCTAGATGCAACGCC | + |
|
Preference number: 3 (lower is better) Translates to: DSHMQHLASERR*GWGEGVPRCNA Trigger: GGCGTTGCATCTAGGCACCCCTTCTCCCCATCCCCACCTCCGCTCGGATGCCAGATGTTGCATGTGGCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR CCA 72 bp | AGGGCCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RACCNCSAPGGN*LGHPKSSLRSS Trigger: GCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | TGCCTGGGCTTCCCGCCAGCGGGAATAGTCTGTGGATaGGTGACCCTGTGGCCACTCGTGGTACCTAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CLGFPPAGIVCG*VTLWPLVVPKG Trigger: ACCTTTAGGTACCACGAGTGGCCACAGGGTCACTCATCCACAGACTATTCCCGCTGGCGGGAAGCCCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | GTCACGGGGTACCACCACGTAGGGTTCATAGTCAGCTaGCCACTGCACACTGTATGGTGCCTGGGCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: VTGYHHVGFIVS*PLHTVWCLGFP Trigger: CGGGAAGCCCAGGCACCATACAGTGTGCAGTGGTCAGCTGACTATGAACCCTACGTGGTGGTACCCCGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR GCA 72 bp | GTGAGCAGCTCTCGTTTGGCTGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGGAGCCTGTCCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VSSSRLAVTFHI*SQPVCWSLSSH Trigger: GTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR GCA 72 bp | GGCAGGAAGGTGATGTGCACCCGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAGCAGGGCTCTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRKVMCTRCTVS*CWRNSKQGSSS Trigger: TGAGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | TGCACGTTCCAGACACAGGGCAGGGGGTGCACCAGATaGGGGTGCTCCTTGATGACCGCATTGAAGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CTFQTQGRGCTR*GCSLMTALKMS Trigger: GGACATCTTCAATGCGGTCATCAAGGAGCACCCCCATCTGGTGCACCCCCTGCCCTGTGTCTGGAACGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | CCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTGGTTaGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVATARPQEGTG*GIQRALFAVAS Trigger: GGAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGCAGGCACCACCAAAGCAGTCTTGCGCCGACTGTCCAGCTCCAGCTGCTGGTTCTTCCAGAGGTaGCCCAGGTACCAGTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SNAGTTKAVLRRLSSSSCWFFQR*PRYQSL Trigger: GAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCA...GCAGCTGGAGCTGGACAGTCGGCGCAAGACTGCTTTGGTGGTGCCTGCATTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCCCGACTTCGGGCCTGCTGCAGGGCAGTGAGGTATTTCAGGGCTGCAGAAGATGGGGGTGCTCCTaGATGACCGCATTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SGPTSGLLQGSEVFQGCRRWGCS*MTALKM Trigger: CATCTTCAATGCGGTCATCAAGGAGCACCCCCATCT...TCTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCGGGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | CACATGCAACATCTGGCATCCGAGCGGAGGTGGGGATaGGGAGAAGGGGTGCCTAGATGCAACGCCTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: HMQHLASERRWG*GEGVPRCNASI Trigger: AATTGAGGCGTTGCATCTAGGCACCCCTTCTCCCCATCCCCACCTCCGCTCGGATGCCAGATGTTGCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR CCA 72 bp | AAGGTGATGTGCACCCGGTGCACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGCTCTTCCTCATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVMCTRCTVSCC*RNSKQGSSSSS Trigger: GCTGGATGAGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | CTGGAGCGGAAGCGGGAGATGTCAAGACTTGGAGCGTaGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: LERKREMSRLGA*GKWIEKASGST Trigger: GGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | AAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTaGATCAGCAGAAGGAACCAGGAACCCCACAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: KPAEAKEGWIPV*ISRRNQEPHKC Trigger: GCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCGTGGGGCAAGTGGATAGAGAAGGCCTCAGGAAGTACCAGGAATTCATATTGGTTCTTCCAGAGGTaGCCCAGGTACCAGTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GAWGKWIEKASGSTRNSYWFFQR*PRYQSL Trigger: GAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCA...ATATGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | CTCGAAGCTTCTTTGGTGAATTCCAGTGGATCACTTTaGGGTCAGCTGCTTCCAGGTAGCAGCGCTCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LEASLVNSSGSL*GQLLPGSSAQP Trigger: GGGCTGAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTGATCCACTGGAATTCACCAAAGAAGCTTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | CGCCTCAATTTCATAAGTGAGGAATTAGAACAGGAGTaGGGGGCGTGCGTTGCAAGCGTCCTCTGGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLNFISEELEQE*GACVASVLWYP Trigger: GGGATACCAGAGGACGCTTGCAACGCACGCCCCCCACTCCTGTTCTAATTCCTCACTTATGAAATTGAGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR CCA 72 bp | CCATCCATGTTCGGAAGAGTGTCTCCAGGATGTTTCTaGCTACGGCATCAGTTATCAGGTGGAGGTGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: PSMFGRVSPGCF*LRHQLSGGGAA Trigger: CGCTGCACCTCCACCTGATAACTGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| 3UTR CCA 72 bp | GAGTTCTTCCGCATCATAGAAGCTGACCACCACCGCTaGCACCATCCATGTTCGGAAGAGTGTCTCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EFFRIIEADHHR*HHPCSEECLQD Trigger: ATCCTGGAGACACTCTTCCGAACATGGATGGTGCCAGCGGTGGTGGTCAGCTTCTATGATGCGGAAGAACTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | AAGCGGGAGATGTCAAGACTTGGAGCGTGGGGCAAGTaGATAGAGAAGGCCTCAGGAAGTACCAGGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KREMSRLGAWGK*IEKASGSTRNS Trigger: TGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGTGGACCGTCCCGGTACACTACATGGTAGGCCACATCCTTCCTCATAGATCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IEWTVPVHYMVGHILPHRSLMTA*KMSWSA Trigger: GGCTGACCAGGACATCTTCAATGCGGTCATCAAGGA...TCTATGAGGAAGGATGTGGCCTACCATGTAGTGTACCGGGACGGTCCACTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCTGGAGCGGAAGCGGGAGATGTCAAGACTTGGAGCGTGGGGCAAGTGGATAAAATGAAGAAATTGTaGAGCCTCTTCATCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GAGAEAGDVKTWSVGQVDKMKKL*SLFICQ Trigger: CTGACAGATGAAGAGGCTCAACAATTTCTTCATTTT...ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCCGCTTCCGCTCCAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | TTCTCCACGAGACCGACCACCTGCTTGTCAGAAAAATaGTCAAAGAGTGCCCAGAGCTCCACAATGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSTRPTTCLSEK*SKSAQSSTMSE Trigger: CTCTGACATTGTGGAGCTCTGGGCACTCTTTGATCATTTTTCTGACAAGCAGGTGGTCGGTCTCGTGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR TCA 72 bp | GAGAAGGCCTCAGGAAGTACCAGGAATTCATATTCCTaGGCATCCAACTCTATGATGTGGGCCACCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EKASGSTRNSYS*ASNSMMWATLF Trigger: GAACAAGGTGGCCCACATCATAGAGTTGGATGCTCAGGAATATGAATTCCTGGTACTTCCTGAGGCCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCGACGTTTCCACAAAATGAAGAAATTGTTGAGCCTCTTCATCTGTCAGGTTCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LATFPQNEEIVEPLHLSGSLMTA*KMSWSA Trigger: GGCTGACCAGGACATCTTCAATGCGGTCATCAAGGA...ACCTGACAGATGAAGAGGCTCAACAATTTCTTCATTTTGTGGAAACGTCGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| 3UTR CCA 72 bp | TACATGGTAGGCCACATCCTTCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATGAAGAAATTGTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YMVGHILPHREH*RRFHKMKKLLS Trigger: GCTCAACAATTTCTTCATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGGAAGGATGTGGCCTACCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGGTGGGGCAGGAAGGTaGTGTGCACCCGGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRGGAGR*CAPGAQ Trigger: CTGTGCACCGGGTGCACATCACCTTCCTGCCCCACC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGGGCTTCCAGCATCTGCAGCCGGTCCATAGAGAGTTGGGCCACCAAGGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRASSICSRSIESWATKVEAAG*RRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTAC...CTTGGTGGCCCAACTCTCTATGGACCGGCTGCAGATGCTGGAAGCCCTGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCAGGCTCATGGGGCCTaGCCAGTGCCTGCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPQAHGA*PVPAQG Trigger: GCCCTGTGCAGGCACTGGCCAGGCCCCATGAGCCTG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGACAGTTGCGGTAGGTaGGGCTGGAGCGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRDSCGR*GWSGSG Trigger: CCCGCTTCCGCTCCAGCCCCACCTACCGCAACTGTC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR CAA 72 bp | CAGGGCTTCCAGCATCTGCAGCCGGTCCATAGAGAGTaGGGCCACCAAGGTGACATCGTGAGGCTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGFQHLQPVHRE*GHQGDIVRLGR Trigger: CCTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAACTCTCTATGGACCGGCTGCAGATGCTGGAAGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGCACCCGGTGCACAGTaGGCTGCTGTTGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRAPGAQ*AAVGGT Trigger: AGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGGSRS*GLEAER Trigger: CCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGGTCCCTTCTTCCCCTaGCCAGCTCCGGCGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRGPFFP*PAPALT Trigger: TGTAAGCGCCGGAGCTGGGCAGGGGAAGAAGGGACC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRVEAAG*RRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTAC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCCAGGCTCATGGGGCCTaGCCAGTGCCTGCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFQAHGA*PVPAQG Trigger: GCCCTGTGCAGGCACTGGCCAGGCCCCATGAGCCTG...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCACAAGGCCAGGCTCATaGGGCCTGGCCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPTRPGS*GLASAC Trigger: GCAGGCACTGGCCAGGCCCCATGAGCCTGGCCTTGT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGGTGGGGCAGGAAGGTaGTGTGCACCCGGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFGGAGR*CAPGAQ Trigger: CTGTGCACCGGGTGCACATCACCTTCCTGCCCCACC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGCCTGGCCAGTGCCTaGACAGGGCTTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGLASA*TGLPAS Trigger: AGATGCTGGAAGCCCTGTGCAGGCACTGGCCAGGCC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCGGCCTGGCCAGTGCCTaGACAGGGCTTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPGLASA*TGLPAS Trigger: AGATGCTGGAAGCCCTGTGCAGGCACTGGCCAGGCC...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGAACTGGTTGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTCCCAGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGNWLGHPKSSLRSSFPVEAAG*RRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTAC...TGGGAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGCAGGCCAGGGCCTATaGTTCTTCCAGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRAGQGL*FFQRLP Trigger: GGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCACAAGGCCAGGCTCATaGGGCCTGGCCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFTRPGS*GLASAC Trigger: GCAGGCACTGGCCAGGCCCCATGAGCCTGGCCTTGT...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGACACTGTATGGTGCCTaGGCTTCCCGCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRTLYGA*ASRQRE Trigger: TTCCCGCTGGCGGGAAGCCCAGGCACCATACAGTGT...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR CAA 72 bp | GCCTGTTGCAACTGCTCGGCCCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCTCTTCGCAGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACCNCSAPGGNW*GHPKSSLRSSF Trigger: GAAGCTACTGCGAAGAGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGCCGAGCAGTTGCAACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGCACCCGGTGCACAGTaGGCTGCTGTTGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFAPGAQ*AAVGGT Trigger: AGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGTGGGGCAGGAAGGTaGTGTGCACCCGGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGGAGR*CAPGAQ Trigger: CTGTGCACCGGGTGCACATCACCTTCCTGCCCCACC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGTGGGGCAGGAAGGTaGTGTGCACCCGGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSGGAGR*CAPGAQ Trigger: CTGTGCACCGGGTGCACATCACCTTCCTGCCCCACC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCGTTGCGGAGCTGGTTaGCTGGATAGAGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRRCGAG*LDRVDR Trigger: ACGGTCCACTCTATCCAGTCAACCAGCTCCGCAACG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGGAAGACGTAGGGTGTaGGAGCCTGGGCCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCGRRRV*EPGPRP Trigger: TGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCCTGCTGCAGGGCAGTaGGGTATTTCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPPAAGQ*GISGLQ Trigger: CTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGTGGAGGCGGAGAGGTTaGGACTCCTGTACGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRWRRRG*DSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCA...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGCTCCCAGCCAGTTTaGTGGAGCCTGTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPCSQPV*WSLSSH Trigger: GTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCTGCTCCCAGCCAGTTTaGTGGAGCCTGTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPCSQPV*WSLSSH Trigger: GTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCA...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGTGATGTGCACCCGGTaGACAGTGAGCTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRVMCTR*TVSCCW Trigger: CCAACAGCAGCTCACTGTGCACCGGGTGCACATCAC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGGCCTGGCCAGTGCCTaGACAGGGCTTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFGLASA*TGLPAS Trigger: AGATGCTGGAAGCCCTGTGCAGGCACTGGCCAGGCC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCVEAAG*RRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTAC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGACAAGGCCAGGCTCATaGGGCCTGGCCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLTRPGS*GLASAC Trigger: GCAGGCACTGGCCAGGCCCCATGAGCCTGGCCTTGT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCACACTGTATGGTGCCTaGGCTTCCCGCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPTLYGA*ASRQRE Trigger: TTCCCGCTGGCGGGAAGCCCAGGCACCATACAGTGT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGACAGTTGCGGTAGGTaGGGCTGGAGCGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLDSCGR*GWSGSG Trigger: CCCGCTTCCGCTCCAGCCCCACCTACCGCAACTGTC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGTTGCGGAGCTGGTTaGCTGGATAGAGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPRCGAG*LDRVDR Trigger: ACGGTCCACTCTATCCAGTCAACCAGCTCCGCAACG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGAAGACGTAGGGTGTaGGAGCCTGGGCCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGRRRV*EPGPRP Trigger: TGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCGGTGGAACTCTTCCTTaGGGGCCTGGAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPGGTLP*GPGDSC Trigger: GCAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACC...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGTGGAACTCTTCCTTaGGGGCCTGGAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGGTLP*GPGDSC Trigger: GCAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCTGCTGCAGGGCAGTaGGGTATTTCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCPAAGQ*GISGLQ Trigger: CTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGGAGGCGGAGAGGTTaGGACTCCTGTACGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPWRRRG*DSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCTGGAGGCGGAGAGGTTaGGACTCCTGTACGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPWRRRG*DSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCA...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTGCTCCCAGCCAGTTTaGTGGAGCCTGTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCCSQPV*WSLSSH Trigger: GTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCA...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCACTTTGAGGTCAGCTaGTTCCAGGTAGCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRHFEVS*FQVAAL Trigger: GAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGTGATGTGCACCCGGTaGACAGTGAGCTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPVMCTR*TVSCCW Trigger: CCAACAGCAGCTCACTGTGCACCGGGTGCACATCAC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGGCAGGAAGGTGATGTaGACCCGGTGCACAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFGRKVM*TRCTVS Trigger: GCTCACTGTGCACCGGGTGCACATCACCTTCCTGCC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGCCTGGCCAGTGCCTaGACAGGGCTTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSGLASA*TGLPAS Trigger: AGATGCTGGAAGCCCTGTGCAGGCACTGGCCAGGCC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCAGGTACCAGTCGCTCTaGTTCTCCACGAGACCGACC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPRYQSL*FSTRPT Trigger: GGTCGGTCTCGTGGAGAACCAGAGCGACTGGTACCT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGAGCGTGGGGCAAGTaGATAGAGAAGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGAWGK*IEKASG Trigger: TCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCGGAGCGTGGGGCAAGTaGATAGAGAAGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPGAWGK*IEKASG Trigger: TCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR CAA 72 bp | GAAGGTGATGTGCACCCGGTGCACAGTGAGCTGCTGTaGGCGGAACTCAAAGCAGGGCTCTTCCTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGDVHPVHSELL*AELKAGLFLIQ Trigger: CTGGATGAGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGCACATCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCCGTTGCGGAGCTGGTTaGCTGGATAGAGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFRCGAG*LDRVDR Trigger: ACGGTCCACTCTATCCAGTCAACCAGCTCCGCAACG...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGGTGGAACTCTTCCTTaGGGGCCTGGAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCGGTLP*GPGDSC Trigger: GCAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCCTGCTGCAGGGCAGTaGGGTATTTCAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSPAAGQ*GISGLQ Trigger: CTGCAGCCCTGAAATACCTCACTGCCCTGCAGCAGG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGTGCCCAGTCCATCTaGAAAGACACGTGGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPCAQSI*KDTWRE Trigger: CTCACGCCACGTGTCTTTTCAGATGGACTGGGCACA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTGGAGGCGGAGAGGTTaGGACTCCTGTACGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFWRRRG*DSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGCTGGGAGGCAGGATaGTGGGAAGTACTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGWEAG*WEVLAS Trigger: TGAAGCTAGTACTTCCCAGCATCCTGCCTCCCAGCC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPRCTVS*CWRNSK Trigger: CTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGTGATGTGCACCCGGTaGACAGTGAGCTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCVMCTR*TVSCCW Trigger: CCAACAGCAGCTCACTGTGCACCGGGTGCACATCAC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGCAGGAAGGTGATGTaGACCCGGTGCACAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGRKVM*TRCTVS Trigger: GCTCACTGTGCACCGGGTGCACATCACCTTCCTGCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGCAGGAAGGTGATGTaGACCCGGTGCACAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSGRKVM*TRCTVS Trigger: GCTCACTGTGCACCGGGTGCACATCACCTTCCTGCC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCGACTTCGGGCCTGCTaGAGGGCAGTGAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCRLRAC*RAVRYF Trigger: GAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCGCAACATCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPATSRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGC...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCAGGTACCAGTCGCTCTaGTTCTCCACGAGACCGACC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFRYQSL*FSTRPT Trigger: GGTCGGTCTCGTGGAGAACCAGAGCGACTGGTACCT...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGCAGGCCAGGGCCTATaGTTCTTCCAGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLAGQGL*FFQRLP Trigger: GGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCAGGCCAGGGCCTATaGTTCTTCCAGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSAGQGL*FFQRLP Trigger: GGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGTCCATAGAGAGTTaGGCCACCAAGGTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPRSIES*ATKVTS Trigger: CGATGTCACCTTGGTGGCCCAACTCTCTATGGACCG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGACACTGTATGGTGCCTaGGCTTCCCGCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLTLYGA*ASRQRE Trigger: TTCCCGCTGGCGGGAAGCCCAGGCACCATACAGTGT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGGAGCGTGGGGCAAGTaGATAGAGAAGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFGAWGK*IEKASG Trigger: TCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRGDVKT*SVGQVD Trigger: ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR CAA 72 bp | GGGTGCACCAGATGGGGGTGCTCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCCAAGGAAGTAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GCTRWGCSLMTA*KMSWSAKEVAI Trigger: GATGGCTACTTCCTTGGCTGACCAGGACATCTTCAATGCGGTCATCAAGGAGCACCCCCATCTGGTGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGTTGCGGAGCTGGTTaGCTGGATAGAGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLRCGAG*LDRVDR Trigger: ACGGTCCACTCTATCCAGTCAACCAGCTCCGCAACG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGTGGAACTCTTCCTTaGGGGCCTGGAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSGGTLP*GPGDSC Trigger: GCAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGTGGAACTCTTCCTTaGGGGCCTGGAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGGTLP*GPGDSC Trigger: GCAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCACTTTGAGGTCAGCTaGTTCCAGGTAGCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCHFEVS*FQVAAL Trigger: GAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCCACTTTGAGGTCAGCTaGTTCCAGGTAGCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFHFEVS*FQVAAL Trigger: GAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTG...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCGACTTCGGGCCTGCTaGAGGGCAGTGAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSRLRAC*RAVRYF Trigger: GAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGAGGTACCAGTCGCTCTaGTTCTCCACGAGACCGACC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLRYQSL*FSTRPT Trigger: GGTCGGTCTCGTGGAGAACCAGAGCGACTGGTACCT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCGGTCCATAGAGAGTTaGGCCACCAAGGTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCRSIES*ATKVTS Trigger: CGATGTCACCTTGGTGGCCCAACTCTCTATGGACCG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCCGGTCCATAGAGAGTTaGGCCACCAAGGTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFRSIES*ATKVTS Trigger: CGATGTCACCTTGGTGGCCCAACTCTCTATGGACCG...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGAGCGTGGGGCAAGTaGATAGAGAAGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGAWGK*IEKASG Trigger: TCCTGAGGCCTTCTCTATCCACTTGCCCCACGCTCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGDVKT*SVGQVD Trigger: ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR TCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTCCAGTGGATCACTTTaGGGTCAGCTGCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFSSGSL*GQLLPG Trigger: ACCTGGAAGCAGCTGACCTCAAAGTGATCCACTGGA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTCCAGTGGATCACTTTaGGGTCAGCTGCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCSSGSL*GQLLPG Trigger: ACCTGGAAGCAGCTGACCTCAAAGTGATCCACTGGA...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGTGTGCCCAGTCCATCTaGAAAGACACGTGGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLCAQSI*KDTWRE Trigger: CTCACGCCACGTGTCTTTTCAGATGGACTGGGCACA...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGCTGGGAGGCAGGATaGTGGGAAGTACTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGWEAG*WEVLAS Trigger: TGAAGCTAGTACTTCCCAGCATCCTGCCTCCCAGCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLVTFHI*SQPVCW Trigger: CCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGAC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSVTFHI*SQPVCW Trigger: CCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGAC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCACTTTGAGGTCAGCTaGTTCCAGGTAGCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLHFEVS*FQVAAL Trigger: GAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSRCTVS*CWRNSK Trigger: CTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGCAACATCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLATSRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGACAGTGAGCTGCTGTTaGCGGAACTCAAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLTVSCC*RNSKQG Trigger: GCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCGGTCCATAGAGAGTTaGGCCACCAAGGTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSRSIES*ATKVTS Trigger: CGATGTCACCTTGGTGGCCCAACTCTCTATGGACCG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGACAGGCTCATGGGGCCTaGCCAGTGCCTGCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGQAHGA*PVPAQG Trigger: GCCCTGTGCAGGCACTGGCCAGGCCCCATGAGCCTG...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRPHREH*RRFHKM Trigger: CATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCTCTGCCTTAGAGTTTaGGAAGCTGAACCGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPLCLRV*EAEPVV Trigger: CACTACCGGTTCAGCTTCCCAAACTCTAAGGCAGAG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTCTGCCTTAGAGTTTaGGAAGCTGAACCGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPLCLRV*EAEPVV Trigger: CACTACCGGTTCAGCTTCCCAAACTCTAAGGCAGAG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCGDVKT*SVGQVD Trigger: ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS-3UTR CCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCACATTACCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFTLPRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGGTAATGT...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176774.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCGGAAGAATTCTGCGTaGTTGTTCTTCACTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPRKNSA*LFFTRS Trigger: GCTTCGAGTGAAGAACAAGCACGCAGAATTCTTCCG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PVWISRRNQEPHKCSTLPWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPPHREH*RRFHKM Trigger: CATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGAGATGTCAAGACTTaGAGCGTGGGGCAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGDVKT*SVGQVD Trigger: ATCCACTTGCCCCACGCTCCAAGTCTTGACATCTCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGCCTTGACAAGTCCTaGTGGAACTCTTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLRLDKS*WNSSLR Trigger: CCTCAAGGAAGAGTTCCACCAGGACTTGTCAAGGCG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGCTTGTCAGAAAAATaGTCAAAGAGTGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPCLSEK*SKSAQS Trigger: GCTCTGGGCACTCTTTGATCATTTTTCTGACAAGCA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGCACCCGGTGCACAGTaGGCTGCTGTTGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGAPGAQ*AAVGGT Trigger: AGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGGAAGACGTAGGGTGTaGGAGCCTGGGCCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGGRRRV*EPGPRP Trigger: TGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGATTACGGAAGAATTCTaGGTGCTTGTTCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKPAEAKEGWIPVWISRRITEEF*VLVLHS Trigger: CGAGTGAAGAACAAGCACGCAGAATTCTTCCGTAAT...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGGTCCCTTCTTCCCCTaGCCAGCTCCGGCGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGGPFFP*PAPALT Trigger: TGTAAGCGCCGGAGCTGGGCAGGGGAAGAAGGGACC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTATCAGGTGGAGGTGCAGCGGATTTTTCCTGTAGAATAGCAGGGACTTCGCAACTACCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSGGGAADFSCRIAGTSQLPRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGGTAGTTG...CGAAGTCCCTGCTATTCTACAGGAAAAATCCGCTGCACCTCCACCTGATAACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCATCACACCAGAAAAATaGTCAAAGAGTGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCITPEK*SKSAQS Trigger: GCTCTGGGCACTCTTTGATCATTTTTCTGGTGTGAT...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090582.11 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCGGAAGAATTCTGCGTaGTTGTTCTTCACTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSRKNSA*LFFTRS Trigger: GCTTCGAGTGAAGAACAAGCACGCAGAATTCTTCCG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGGAAGAATTCTGCGTaGTTGTTCTTCACTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLRKNSA*LFFTRS Trigger: GCTTCGAGTGAAGAACAAGCACGCAGAATTCTTCCG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSPHREH*RRFHKM Trigger: CATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGACAGTTGCGGTAGGTaGGGCTGGAGCGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQDSCGR*GWSGSG Trigger: CCCGCTTCCGCTCCAGCCCCACCTACCGCAACTGTC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATGACCGCATTGAAGATGTCCTGGTCAGCCAAGGAAGTAGCCATCAGAGTGAGCATTTTTCCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MTALKMSWSAKEVAIRVSIFPRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGGAAAAAT...GCTCACTCTGATGGCTACTTCCTTGGCTGACCAGGACATCTTCAATGCGGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176289.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGTGCTTGTCAGAAAAATaGTCAAAGAGTGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLCLSEK*SKSAQS Trigger: GCTCTGGGCACTCTTTGATCATTTTTCTGACAAGCA...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGCACCCGGTGCACAGTaGGCTGCTGTTGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQAPGAQ*AAVGGT Trigger: AGTTCCGCCAACAGCAGCTCACTGTGCACCGGGTGC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAAGACGTAGGGTGTaGGAGCCTGGGCCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQGRRRV*EPGPRP Trigger: TGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCATTACGGAAGAATTCTaGGTGCTTGTTCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFITEEF*VLVLHS Trigger: CGAGTGAAGAACAAGCACGCAGAATTCTTCCGTAAT...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAAGGTACCAGTCGCTCTaGTTCTCCACGAGACCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGRYQSL*FSTRPT Trigger: GGTCGGTCTCGTGGAGAACCAGAGCGACTGGTACCT...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| 3UTR CAA 72 bp | AGGGACTTCGTTAGGGTAATAATCTCTCGGCTGGAGTaGTATCCCGCACACACGATAGCCACATGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RDFVRVIISRLE*YPAHTIATCNI Trigger: GATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATTATTACCCTAACGAAGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPVWISRRNQEPHKCSTLKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGCAGGAAGGTGATGTaGACCCGGTGCACAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQGRKVM*TRCTVS Trigger: GCTCACTGTGCACCGGGTGCACATCACCTTCCTGCC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGCCCCAGGAGGGAACTaGTTGGGGCATCCAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQAPGGN*LGHPKS Trigger: GCTCTTTGGATGCCCCAACCAGTTCCCTCCTGGGGC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGACACTGTATGGTGCCTaGGCTTCCCGCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQTLYGA*ASRQRE Trigger: TTCCCGCTGGCGGGAAGCCCAGGCACCATACAGTGT...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGCGACTTCGGGCCTGCTaGAGGGCAGTGAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQRLRAC*RAVRYF Trigger: GAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCG...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGGAGGTGGCGGCTGGTaGGGCAGGAAGGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRGGGGW*GRKVMC Trigger: GCACATCACCTTCCTGCCCCACCAGCCGCCACCTCC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGACAAGGCCAGGCTCATaGGGCCTGGCCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRTRPGS*GLASAC Trigger: GCAGGCACTGGCCAGGCCCCATGAGCCTGGCCTTGT...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGACAGTTGCGGTAGGTaGGGCTGGAGCGGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRDSCGR*GWSGSG Trigger: CCCGCTTCCGCTCCAGCCCCACCTACCGCAACTGTC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGACGCCTTGACAAGTCCTaGTGGAACTCTTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGRLDKS*WNSSLR Trigger: CCTCAAGGAAGAGTTCCACCAGGACTTGTCAAGGCG...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGTTGGGCCACCAAGGTaGCATCGTGAGGCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRVGPPR*HREAGE Trigger: CTCCCCAGCCTCACGATGTCACCTTGGTGGCCCAAC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQVTFHI*SQPVCW Trigger: CCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGAC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGGCCTGGCCAGTGCCTaGACAGGGCTTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRGLASA*TGLPAS Trigger: AGATGCTGGAAGCCCTGTGCAGGCACTGGCCAGGCC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRVEAAG*RRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTAC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGCAACATCTCGCACTTaGGTGGCAGTAGAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQATSRT*VAVEAA Trigger: CGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGACTCTGCCTTAGAGTTTaGGAAGCTGAACCGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGLCLRV*EAEPVV Trigger: CACTACCGGTTCAGCTTCCCAAACTCTAAGGCAGAG...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| 3UTR CAA 72 bp | AGAGAGCACTGGCGACGTTTCCACAAAATGAAGAAATaGTTGAGCCTCTTCATCTGTCAGGTACAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REHWRRFHKMKK*LSLFICQVQGQ Trigger: CTGGCCTTGTACCTGACAGATGAAGAGGCTCAACAATTTCTTCATTTTGTGGAAACGTCGCCAGTGCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148352.8 ENSMUST00000176289.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGTGCTCCCAGCCAGTTTaGTGGAGCCTGTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRCSQPV*WSLSSH Trigger: GTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCA...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGACGGAAGAATTCTGCGTaGTTGTTCTTCACTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGRKNSA*LFFTRS Trigger: GCTTCGAGTGAAGAACAAGCACGCAGAATTCTTCCG...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGATGCTTGTCAGAAAAATaGTCAAAGAGTGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGCLSEK*SKSAQS Trigger: GCTCTGGGCACTCTTTGATCATTTTTCTGACAAGCA...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCTGTCCAGCTCCAGCTaGTCGATAGAAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRLSSSS*SIEALR Trigger: CCTCAGGGCTTCTATCGAGCAGCTGGAGCTGGACAG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCGACTTCGGGCCTGCTaGAGGGCAGTGAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRRLRAC*RAVRYF Trigger: GAAATACCTCACTGCCCTGCAGCAGGCCCGAAGTCG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGCTCTGCCTTAGAGTTTaGGAAGCTGAACCGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQLCLRV*EAEPVV Trigger: CACTACCGGTTCAGCTTCCCAAACTCTAAGGCAGAG...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGGCTGGGAGGCAGGATaGTGGGAAGTACTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRGWEAG*WEVLAS Trigger: TGAAGCTAGTACTTCCCAGCATCCTGCCTCCCAGCC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGGTCACCTTCCACATCTaGTCCCAGCCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRVTFHI*SQPVCW Trigger: CCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGAC...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCACTTTGAGGTCAGCTaGTTCCAGGTAGCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRHFEVS*FQVAAL Trigger: GAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGCGGAAGAATTCTGCGTaGTTGTTCTTCACTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQRKNSA*LFFTRS Trigger: GCTTCGAGTGAAGAACAAGCACGCAGAATTCTTCCG...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAATTACGGAAGAATTCTaGGTGCTTGTTCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGITEEF*VLVLHS Trigger: CGAGTGAAGAACAAGCACGCAGAATTCTTCCGTAAT...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCGGTGCACAGTGAGCTaGTGTTGGCGGAACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRRCTVS*CWRNSK Trigger: CTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQPHREH*RRFHKM Trigger: CATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGG...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCGCCTTGACAAGTCCTaGTGGAACTCTTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRRLDKS*WNSSLR Trigger: CCTCAAGGAAGAGTTCCACCAGGACTTGTCAAGGCG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGATTACGGAAGAATTCTaGGTGCTTGTTCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQITEEF*VLVLHS Trigger: CGAGTGAAGAACAAGCACGCAGAATTCTTCCGTAAT...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCTCTGCCTTAGAGTTTaGGAAGCTGAACCGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRLCLRV*EAEPVV Trigger: CACTACCGGTTCAGCTTCCCAAACTCTAAGGCAGAG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGTGGGAGGCAGGATGCTaGGAAGTACTAGCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRWEAGC*EVLASL Trigger: TAATGAAGCTAGTACTTCCCAGCATCCTGCCTCCCA...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCCTCATAGAGAGCACTaGCGACGTTTCCACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRPHREH*RRFHKM Trigger: CATTTTGTGGAAACGTCGCCAGTGCTCTCTATGAGG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGAAAATGATCAAAGAGTaGCCAGAGCTCCACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRKMIKE*PELHNV Trigger: GACATTGTGGAGCTCTGGGCACTCTTTGATCATTTT...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS CCA 90 bp | CAGGAACCTCGGGGATGGCAGCACTTGGCACAACTACCTCGCACTTaGGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAGAGGTTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: QEPRGWQHLAQLPRT*VAVEAAGWRRRGCD Trigger: GTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAGTTGTGCCAAGTGCTGCCATCCCCGAGGTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRLLPAS*LEPVQP Trigger: TGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGTGGGCCAAGGCCACGTaGCGGAGCTGGTTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRWAKAT*RSWLTG Trigger: TCCAGTCAACCAGCTCCGCAACGTGGCCTTGGCCCA...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVWISRRNQEPHKCSTLPLLPAS*LEPVQP Trigger: TGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAG...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRPGGNW*GHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTGGGCCAAGGCCACGTaGCGGAGCTGGTTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFWAKAT*RSWLTG Trigger: TCCAGTCAACCAGCTCCGCAACGTGGCCTTGGCCCA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTGGGCCAAGGCCACGTaGCGGAGCTGGTTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCWAKAT*RSWLTG Trigger: TCCAGTCAACCAGCTCCGCAACGTGGCCTTGGCCCA...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGGGGAGATGTCAAGACTaGGAGCGTGGGGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRGRCQD*ERGASG Trigger: TCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCC...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATCACTTTGAGGTCAGCTGCTTCCAGGTAGCAGCGCTCAGCCCGAGTGTGCAAATGCCCAGATGGTaGGACTGGCCAGGAACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VDHFEVSCFQVAALSPSVQMPRW*DWPGTS Trigger: CGAGGTTCCTGGCCAGTCCAACCATCTGGGCATTTG...CACACTCGGGCTGAGCGCTGCTACCTGGAAGCAGCTGACCTCAAAGTGATCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
||
| CDS GCA 90 bp | ATAGCCACATGCAACATTACCTCGCACTTGGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGGTTGCGACTCCTGTACGGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IATCNITSHLGGSRS*GLEAERLRLLYGSS Trigger: TGAAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPVWISRRNQEPHKCSTLLLPAS*LEPVQP Trigger: TGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCGGGAGATGTCAAGACTaGGAGCGTGGGGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPGRCQD*ERGASG Trigger: TCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCC...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGCAGACCCATAGCGCCTaGACAAGTCCTGGTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRQTHSA*TSPGGT Trigger: AGTTCCACCAGGACTTGTCAAGGCGCTATGGGTCTG...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGATCTCTCGGCTGGAGTaGTATCCCGCACACACGATA | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRISRLE*YPAHTI Trigger: TATCGTGTGTGCGGGATACAACTCCAGCCGAGAGAT...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCGTGAGCAGCTCTCGTTaGGCTGTCACCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: PVWISRRNQEPHKCSTLPVSSSR*AVTFHI Trigger: GATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAGCTGAGGCAAAGGAGGGCTGGATCCCAGTGTGGATCAGCAGAAGGTCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKPAEAKEGWIPVWISRRSLMTA*KMSWSA Trigger: GGCTGACCAGGACATCTTCAATGCGGTCATCAAGGA...CCTTCTGCTGATCCACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCPGGNW*GHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFPGGNW*GHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTGGTGGAACTCTTCCTaGAGGGCCTGGAGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPWWNSS*RAWRQL Trigger: CAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACCA...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCCAGACCCATAGCGCCTaGACAAGTCCTGGTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPQTHSA*TSPGGT Trigger: AGTTCCACCAGGACTTGTCAAGGCGCTATGGGTCTG...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS GCA 90 bp | ATAATCTCTCGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IISRLELYPAHTIAT*NISHLGGSRSCGLE Trigger: CTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCATCTCTCGGCTGGAGTaGTATCCCGCACACACGATA | + |
|
Preference number: 5 (lower is better) Translates to: PVWISRRNQEPHKCSTLPISRLE*YPAHTI Trigger: TATCGTGTGTGCGGGATACAACTCCAGCCGAGAGAT...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTTGGTTCTTCCAGAGGTaGCCCAGGTACCAGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSWFFQR*PRYQSL Trigger: GAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCA...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCGTGAGCAGCTCTCGTTaGGCTGTCACCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFVSSSR*AVTFHI Trigger: GATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCGTGAGCAGCTCTCGTTaGGCTGTCACCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCVSSSR*AVTFHI Trigger: GATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCAGATGGGGGTGCTCCTaGATGACCGCATTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPRWGCS*MTALKM Trigger: CATCTTCAATGCGGTCATCAAGGAGCACCCCCATCT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSPGGNW*GHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGGGGAGATGTCAAGACTaGGAGCGTGGGGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPVWISRRNQEPHKCSTLGRCQD*ERGASG Trigger: TCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCC...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTGGTGGAACTCTTCCTaGAGGGCCTGGAGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFWWNSS*RAWRQL Trigger: CAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACCA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCAGACCCATAGCGCCTaGACAAGTCCTGGTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCQTHSA*TSPGGT Trigger: AGTTCCACCAGGACTTGTCAAGGCGCTATGGGTCTG...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS GCA 90 bp | ATAATCTCTCGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATTACCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IISRLELYPAHTIAT*NITSHLGGSRSCGL Trigger: CAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGTGAGCAGCTCTCGTTaGGCTGTCACCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSVSSSR*AVTFHI Trigger: GATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFSLMTA*KMSWSA Trigger: GGCTGACCAGGACATCTTCAATGCGGTCATCAAGGA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGTGGTGGAACTCTTCCTaGAGGGCCTGGAGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPVWISRRNQEPHKCSTLWWNSS*RAWRQL Trigger: CAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACCA...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCAGACCCATAGCGCCTaGACAAGTCCTGGTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: IPVWISRRNQEPHKCSTLQTHSA*TSPGGT Trigger: AGTTCCACCAGGACTTGTCAAGGCGCTATGGGTCTG...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTAGATGGGGGTGCTCCTaGATGACCGCATTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSRWGCS*MTALKM Trigger: CATCTTCAATGCGGTCATCAAGGAGCACCCCCATCT...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGAGATGGGGGTGCTCCTaGATGACCGCATTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IPVWISRRNQEPHKCSTLRWGCS*MTALKM Trigger: CATCTTCAATGCGGTCATCAAGGAGCACCCCCATCT...CAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCTCACTCGAAGCTTCTTaGGTGAATTCCAGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SQCGSAEGTRNPTNAPLCSLEAS*VNSSGS Trigger: TGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGA...GCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCTTCTCACTCGAAGCTTCTTaGGTGAATTCCAGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CGSAEGTRNPTNAPLCPFSLEAS*VNSSGS Trigger: TGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGA...GAAGGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTTCACTCGAAGCTTCTTaGGTGAATTCCAGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSSLEAS*VNSSGS Trigger: TGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGA...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | TTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGAGGGAGATGTCAAGACTaGGAGCGTGGGGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNNLNSSKGGHPGQPLQGGRCQD*ERGASG Trigger: TCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCC...TCCCTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCCAAAATGAAGAAATTGTaGAGCCTCTTCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCGSAEGTRNPTNAPLCPKMKKL*SLFICQ Trigger: CTGACAGATGAAGAGGCTCAACAATTTCTTCATTTT...GGGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTGCCCAAAATGAAGAAATTGTaGAGCCTCTTCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVWISRRNQEPHKCSTLPKMKKL*SLFICQ Trigger: CTGACAGATGAAGAGGCTCAACAATTTCTTCATTTT...GGGCAGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGCCAGGAGGGAACTGGTaGGGGCATCCAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQPGGNW*GHPKSS Trigger: AGAGCTCTTTGGATGCCCCAACCAGTTCCCTCCTGG...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGGGAGATGTCAAGACTaGGAGCGTGGGGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQGRCQD*ERGASG Trigger: TCCACTTGCCCCACGCTCCAAGTCTTGACATCTCCC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRLLPAS*LEPVQP Trigger: TGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGGTGAGCAGCTCTCGTTaGGCTGTCACCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQVSSSR*AVTFHI Trigger: GATGTGGAAGGTGACAGCCAAACGAGAGCTGCTCAC...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTGTGGATCAGCAGAAGGAACCAGGAACCCCACAAATGCTCCACTCTAAAATGAAGAAATTGTaGAGCCTCTTCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DPSVDQQKEPGTPQMLHSKMKKL*SLFICQ Trigger: CTGACAGATGAAGAGGCTCAACAATTTCTTCATTTT...AGAGTGGAGCATTTGTGGGGTTCCTGGTTCCTTCTGCTGATCCACACTGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGTGGTGGAACTCTTCCTaGAGGGCCTGGAGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQWWNSS*RAWRQL Trigger: CAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACCA...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGATCTCTCGGCTGGAGTaGTATCCCGCACACACGATA | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQISRLE*YPAHTI Trigger: TATCGTGTGTGCGGGATACAACTCCAGCCGAGAGAT...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGTCCTTGATGACCGCATaGAAGATGTCCTGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQSLMTA*KMSWSA Trigger: GGCTGACCAGGACATCTTCAATGCGGTCATCAAGGA...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGTGGTGGAACTCTTCCTaGAGGGCCTGGAGACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRWWNSS*RAWRQL Trigger: CAACTGTCTCCAGGCCCTCAAGGAAGAGTTCCACCA...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGCAGACCCATAGCGCCTaGACAAGTCCTGGTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRQTHSA*TSPGGT Trigger: AGTTCCACCAGGACTTGTCAAGGCGCTATGGGTCTG...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGATCTCTCGGCTGGAGTaGTATCCCGCACACACGATA | + |
|
Preference number: 5 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRISRLE*YPAHTI Trigger: TATCGTGTGTGCGGGATACAACTCCAGCCGAGAGAT...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTTTATTATATAAGAGAATTAGACTAGCCCCAAACCAGCTGAGGCAAAGGTCACTCGAAGCTTCTTaGGTGAATTCCAGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KFLLYKRIRLAPNQLRQRSLEAS*VNSSGS Trigger: TGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGA...CCTTTGCCTCAGCTGGTTTGGGGCTAGTCTAATTCTCTTATATAATAAAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAATAACTTAAATAGCAGTAAGGGTGGACACCCTGGTCAGCCTCTACAGAAAATGAAGAAATTGTaGAGCCTCTTCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILNNLNSSKGGHPGQPLQKMKKL*SLFICQ Trigger: CTGACAGATGAAGAGGCTCAACAATTTCTTCATTTT...CTGTAGAGGCTGACCAGGGTGTCCACCCTTACTGCTATTTAAGTTATTTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176774.8 ENSMUST00000176810.8 |
||
| CDS CAA 72 bp | TCGGGGATGGCAGCACTTGGCACAACTACCTCGCACTaGGGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGMAALGTTTSH*GGSRSCGLEAE Trigger: CTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAGTTGTGCCAAGTGCTGCCATCCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| CDS CAA 90 bp | CCAGGAACCTCGGGGATGGCAGCACTTGGCACAACTACCTCGCACTaGGGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAGAGGTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: PGTSGMAALGTTTSH*GGSRSCGLEAERLR Trigger: TCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAGTTGTGCCAAGTGCTGCCATCCCCGAGGTTCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| CDS CAA 90 bp | TCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAGAGGTaGCGACTCCTGTACGGGTCTTCATCGAGGGTAGCAGTTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SHLGGSRSCGLEAER*RLLYGSSSRVAVVP Trigger: GGGCACAACTGCTACCCTCGATGAAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176339.2 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS GCA 72 bp | GGCACAACTACCTCGCACTTGGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGGTTGCGACTCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: GTTTSHLGGSRS*GLEAERLRLLY Trigger: GTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAGTTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| CDS CCA 72 bp | CTACCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGACTCCTGTACGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPRTWVAVEAAG*RRRGCDSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148352.8 |
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| CDS CAA 72 bp | GGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAGAGGTaGCGACTCCTGTACGGGTCTTCATCGAGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GGSRSCGLEAER*RLLYGSSSRVA Trigger: TGCTACCCTCGATGAAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000148352.8 ENSMUST00000176289.8 ENSMUST00000176339.2 ENSMUST00000176774.8 ENSMUST00000176810.8 |
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| CDS GCA 72 bp | GCGGATTTTTCCTCGCACTTGGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGGTTGCGACTCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ADFSSHLGGSRS*GLEAERLRLLY Trigger: GTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGAAAAATCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176289.8 |
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| CDS CCA 72 bp | ACATCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGACTCCTGTACGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TSRTWVAVEAAG*RRRGCDSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS CCA 72 bp | TTACCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGACTCCTGTACGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPRTWVAVEAAG*RRRGCDSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
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| CDS CCA 72 bp | TTTCCTCGCACTTGGGTGGCAGTAGAAGCTGCGGGCTaGAGGCGGAGAGGTTGCGACTCCTGTACGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FPRTWVAVEAAG*RRRGCDSCTGL Trigger: AAGACCCGTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176289.8 |
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| CDS TCA 72 bp | CAGTTGTGCCCAGTCCATCTGAAAAGACACGTGGCGTaGGCAGGCAGCGGTCACACAGGGTCCCTTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QLCPVHLKRHVA*AGSGHTGSLLP Trigger: GGGAAGAAGGGACCCTGTGTGACCGCTGCCTGCTCACGCCACGTGTCTTTTCAGATGGACTGGGCACAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS GCA 72 bp | ACATGCAACATCTCGCACTTGGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGGTTGCGACTCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: TCNISHLGGSRS*GLEAERLRLLY Trigger: GTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS GCA 72 bp | TGCAACATTACCTCGCACTTGGGTGGCAGTAGAAGCTaGGGGCTGGAGGCGGAGAGGTTGCGACTCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: CNITSHLGGSRS*GLEAERLRLLY Trigger: GTACAGGAGTCGCAACCTCTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
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| CDS CAA 72 bp | GCACACACGATAGCCACATGCAACATTACCTCGCACTaGGGTGGCAGTAGAAGCTGCGGGCTGGAGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: AHTIATCNITSH*GGSRSCGLEAE Trigger: CTCCGCCTCCAGCCCGCAGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCTATCGTGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
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| CDS GCA 72 bp | CGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATCTCGCACTTGGGTGGCAGTAGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RLELYPAHTIAT*NISHLGGSRSC Trigger: GCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068586.13 ENSMUST00000090582.11 ENSMUST00000111284.9 ENSMUST00000176810.8 |
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| CDS CAA 90 bp | CAGCTCTCGTTTGGCTGTCACCTTCCACATCTGCTCCCAGCCAGTTaGCTGGAGCCTGTCCAGCCACAGCAGGATCACACCAGAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: QLSFGCHLPHLLPAS*LEPVQPQQDHTRKM Trigger: CATTTTTCTGGTGTGATCCTGCTGTGGCTGGACAGGCTCCAGCAAACTGGCTGGGAGCAGATGTGGAAGGTGACAGCCAAACGAGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090582.11 |
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| CDS GCA 72 bp | CGGCTGGAGTTGTATCCCGCACACACGATAGCCACATaGAACATTACCTCGCACTTGGGTGGCAGTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RLELYPAHTIAT*NITSHLGGSRS Trigger: GCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
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| CDS CAA 72 bp | AGGGACTTCGTTAGGGTAATAATCTCTCGGCTGGAGTaGTATCCCGCACACACGATAGCCACATGCAACATT | + |
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Preference number: 6 (lower is better) Translates to: RDFVRVIISRLE*YPAHTIATCNI Trigger: AATGTTGCATGTGGCTATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATTATTACCCTAACGAAGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176339.2 ENSMUST00000176774.8 |
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