Pregenerated sensors for LAO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024903Ensembl transcript IDs: ENSMUST00000058651.5
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTaGGACAGAATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: AFVCPGSAISHRERE*DRIGGGVSCSFPVG Trigger: CCCAACTGGGAAGCTACAAGAGACACCACCCCCTATTCTGTCTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGTCTTGGTGGTGGTGGTaGGGCATCCTGATTGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: SLPLYALALLFPIERGSESWWWW*GILIVG Trigger: GCCAACAATCAGGATGCCCCACCACCACCACCAAGA...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTTGTTCTTGGTGGTGGTaGTGGGGCATCCTGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSCSWWW*WGILIV Trigger: AACAATCAGGATGCCCCACCACCACCACCAAGAACA...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGATTGTTCTTGGTGGTaGTGGTGGGGCATCCTGATT | + |
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Preference number: 2 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQDCSWW*WWGILI Trigger: AATCAGGATGCCCCACCACCACCACCAAGAACAATC...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR GCA 72 bp | AGCCTTGACAGCTACCCCCTACTCCCTGCCTTTGTATaGCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SLDSYPLLPAFV*PGSAISHRERE Trigger: CTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGAGTAGGGGGTAGCTGTCAAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGTCCCACAGATTGTTCTaGGTGGTGGTGGTGGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SLPLYALALLFPIERGSESHRLF*VVVVGH Trigger: ATGCCCCACCACCACCACCAAGAACAATCTGTGGGA...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTAGACTCTCCCACAGATaGTTCTTGGTGGTGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSRLSHR*FLVVVV Trigger: CACCACCACCACCAAGAACAATCTGTGGGAGAGTCT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR TCA 72 bp | AGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGGTaGCTTCTCTCCTGGGTCTCGGCTTCCTTTCATCTT | + |
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Preference number: 3 (lower is better) Translates to: SWASACRPRDQW*LLSWVSASFHL Trigger: AAGATGAAAGGAAGCCGAGACCCAGGAGAGAAGTCACCACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR TCA 72 bp | TTCAAGCTAAAGGCTGATTCTAGAATTCTCCAGCCTTaGCAGCTACCCCCTACTCCCTGCCTTTGTATGCCC | + |
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Preference number: 3 (lower is better) Translates to: FKLKADSRILQP*QLPPTPCLCMP Trigger: GGGCATACAAAGGCAGGGAGTAGGGGGTAGCTGTCAAGGCTGGAGAATTCTAGAATCAGCCTTTAGCTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCCAGCAGGACTCCCTTaGCGCCTGGCAGGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSPAGLP*RLAGCG Trigger: GCCACAGCCTGCCAGGCGGCAAGGGAGTCCTGCTGG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGGCGAGTGGCCTTGGCTaGGGCAGTGATGATGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEASGLG*GSDDGV Trigger: TACGCCATCATCACTGCCTCAGCCAAGGCCACTCGC...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTTTGTCCACTGCAGCCTaGATGTTGCAGGAGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSLSTAA*MLQEAR Trigger: CCGGGCCTCCTGCAACATTCAGGCTGCAGTGGACAA...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGCCACTAGGCCTGCCATaGCAGCTCCCACTACCACCA | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEPLGLP*QLPLPP Trigger: TGGTGGTAGTGGGAGCTGGCATGGCAGGCCTAGTGG...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGCCCCAGCAAAGTAGATaGGGCCCTCTGGCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEPQQSR*GPLAGR Trigger: TCTCCCAGCCAGAGGGCCGCATCTACTTTGCTGGGG...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCTCTCGGGACAGAGGTaGCTGGAAGGTGATGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSLSGQR*LEGDEA Trigger: CGCCTCATCACCTTCCAGCCACCTCTGTCCCGAGAG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGTCCGCAGTGAGTTTGTaGAGTGCAGAGGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSESAVSL*SAEVGP Trigger: TGGGCCCACCTCTGCACTGCACAAACTCACTGCGGA...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTAGTAGCCGCCCCGGATaGCATCTTGTTCCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSSSRPG*HLVPRS Trigger: GCTTCTGGGAACAAGATGGCATCCGGGGCGGCTACT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTAGAGGGCAAGACAGCTaGAGACGCAGAGCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSRGQDS*RRRAGS Trigger: GGATCCTGCTCTGCGTCTCCAGCTGTCTTGCCCTCT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTTGTGCAGTGCAGAGGTaGGCCCATCTGTGCGGTACA | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSCAVQR*AHLCGT Trigger: TGTACCGCACAGATGGGCCCACCTCTGCACTGCACA...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAACGGGACAGAGGTGGCTaGAAGGTGATGAGGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQRDRGG*KVMRRV Trigger: CACTCGCCTCATCACCTTCCAGCCACCTCTGTCCCG...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGTAGATGCGGCCCTCTaGCTGGGAGAGCTGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQVDAAL*LGELLR Trigger: TCGAAGCAGCTCTCCCAGCCAGAGGGCCGCATCTAC...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGGCCTCCTTGTCCACTaGAGCCTGAATGTTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSGLLVH*SLNVAG Trigger: TCCTGCAACATTCAGGCTGCAGTGGACAAGGAGGCC...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTACCCTACCTCCGATGTaGTTGCTGGCCTCCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSTLPPM*LLASKM Trigger: CATCTTGGAGGCCAGCAACCACATCGGAGGTAGGGT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCATCGACCACCTGGTTaGGCTTCAGGGCAGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSHRPPG*ASGQQR Trigger: TCTTTGCTGCCCTGAAGCCCAACCAGGTGGTCGATG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGCTTTAGCTCCTCCTTaGGTATGCGGTGCACTGCCG | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQALAPP*VCGALP Trigger: CGGCAGTGCACCGCATACCCAAGGAGGAGCTAAAGC...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAACCGTATGTCCTCGAGTaGCCTCCTTGTCCACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQPYVLE*PPCPLQ Trigger: CTGCAGTGGACAAGGAGGCCACTCGAGGACATACGG...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| 3UTR CAA 72 bp | TCTCCAGCCTTGACAGCTACCCCCTACTCCCTGCCTTaGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPALTATPYSLP*YALALLFPIER Trigger: TCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGAGTAGGGGGTAGCTGTCAAGGCTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAATGGCGTAATCCGCAGTaGGTTTGTGCAGTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQWRNPQ*VCAVQR Trigger: CCTCTGCACTGCACAAACTCACTGCGGATTACGCCA...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGAATCATCACCCACAGTaGAAGAGGCCAGCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSENHHPQ*KRPAGL Trigger: GAGTCCTGCTGGCCTCTTTCACTGTGGGTGATGATT...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTAGTGAGTTTGTGCAGTaGAGAGGTGGGCCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSSEFVQ*RGGPIC Trigger: ACAGATGGGCCCACCTCTGCACTGCACAAACTCACT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGCTGACTTTGGGCACATaGGCTTTAGCTCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSELTLGT*ALAPPW Trigger: CCAAGGAGGAGCTAAAGCGCATGTGCCCAAAGTCAG...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCTCCGATGTGGTTGCTaGCCTCCAAGATGGTTACCT | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSLRCGC*PPRWLP Trigger: AGGTAACCATCTTGGAGGCCAGCAACCACATCGGAG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAAGGCCATTGGGGAGTTaGTCAAAGCCACCGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQRPLGS*SKPPVI Trigger: GATCACCGGTGGCTTTGACCAACTCCCCAATGGCCT...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCCACTCTTTCTACTTTaGACCCCAGACGGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSPLFLL*TPDGWC Trigger: GCACCATCCGTCTGGGGTCCAAAGTAGAAAGAGTGG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAACAACATCGACCACCTaGTTGGGCTTCAGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQTTSTT*LGFRAA Trigger: TGCTGCCCTGAAGCCCAACCAGGTGGTCGATGTTGT...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGGCCCATTCTGGGCTATaGGAAGGAAGGCCTCATAAT | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEAHSGL*EGRPHN Trigger: ATTATGAGGCCTTCCTTCTCATAGCCCAGAATGGGC...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAAAGATGGTTACCTCGTaGCCAGCATCCTGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQKMVTS*PASCRV Trigger: GACCCTACAGGATGCTGGTCACGAGGTAACCATCTT...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGGGTCAAAGCCACCGGTaGTCTCTGAAAATTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEGQSHR*SLKIGH Trigger: GTGACCAATTTTCAGAGATCACCGGTGGCTTTGACC...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGGCAGCTGGCTGCAGTTaGATGTCTTCCTATGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEAAGCS*MSSYVV Trigger: AACCACATAGGAAGACATCCAACTGCAGCCAGCTGC...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGGATCCTGGAAACACTTaGCAAGGTTCTCATAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSEDPGNT*QGSHRG Trigger: CCCTCTATGAGAACCTTGTCAAGTGTTTCCAGGATC...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGGTAGAACAGGTCTGTaGCAGTTTTGTTCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSGRTGL*QFCSSL Trigger: CAGAGAAGAACAAAACTGTCACAGACCTGTTCTACC...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR TCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGCCACCGGTGATCTCTaGAAATTGGTCACTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQATGDL*KLVTFG Trigger: TCCAAAAGTGACCAATTTTCAGAGATCACCGGTGGC...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGTCAGGTAAGCCTTGGTaGAGTAAGAGTCATAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLYALALLFPIERGSESGKPW*SKSHKG Trigger: CCCTTTATGACTCTTACTCCACCAAGGCTTACCTGA...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR GCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAATTTGGAGAAGATGCTTaGAATCCTCAGAGACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQFGEDA*NPQRLQ Trigger: CTGGAGTCTCTGAGGATTGCAAGCATCTTCTCCAAA...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGGATGTCTTCCTATGTaGTTTGATCTTAGTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSGCLPM*FDLSDG Trigger: GCCATCACTAAGATCAAACCACATAGGAAGACATCC...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAATCATCAGGTAAGCCTTaGTGGAGTAAGAGTCATAAA | + |
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Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQSSGKP*WSKSHK Trigger: TTTATGACTCTTACTCCACCAAGGCTTACCTGATGA...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGTGATCTCTGAAAATTaGTCACTTTTGGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSVISEN*SLLEKM Trigger: CATCTTCTCCAAAAGTGACCAATTTTCAGAGATCAC...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAATTGCTATCATACTGGTaGAACTTATTCAGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQLLSYW*NLFSFR Trigger: CCTGAAACTGAATAAGTTCCACCAGTATGATAGCAA...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAAAAATTGGTCACTTTTaGAGAAGATGCTTGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQKIGHF*RRCLQS Trigger: GGATTGCAAGCATCTTCTCCAAAAGTGACCAATTTT...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 90 bp | ATCATCACCCACAGTGAAAGAGGCCAGCAGGACTCCCTTGCCGCCTaGCAGGCTGTGGCTGGGATAGTAAATGAAGCGGGAGGGTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IITHSERGQQDSLAA*QAVAGIVNEAGGSV Trigger: GACCGACCCTCCCGCTTCATTTACTATCCCAGCCACAGCCTGCCAGGCGGCAAGGGAGTCCTGCTGGCCTCTTTCACTGTGGGTGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGCCAGCAGGACTCCCTaGCCGCCTGGCAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQASRTP*PPGRLW Trigger: CCACAGCCTGCCAGGCGGCAAGGGAGTCCTGCTGGC...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS TCA 90 bp | ACCCTACCTCCGATGTGGTTGCTGGCCTCCAAGATGGTTACCTCGTaGCCAGCATCCTGTAGGGTCTTAGCTGCCACTAGGCCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLPPMWLLASKMVTS*PASCRVLAATRPAM Trigger: CATGGCAGGCCTAGTGGCAGCTAAGACCCTACAGGATGCTGGTCACGAGGTAACCATCTTGGAGGCCAGCAACCACATCGGAGGTAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTACATCGACCACCTGGTaGGGCTTCAGGGCAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSTSTTW*GFRAAK Trigger: CTTTGCTGCCCTGAAGCCCAACCAGGTGGTCGATGT...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 90 bp | CGATGGCCCCTTTGCTCAGCGTTCCTTCCTTCATCAGGTAAGCCTTaGTGGAGTAAGAGTCATAAAGGGAGAGCAGCTGGCTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPLCSAFLPSSGKP*WSKSHKGRAAGCSW Trigger: CCAACTGCAGCCAGCTGCTCTCCCTTTATGACTCTTACTCCACCAAGGCTTACCTGATGAAGGAAGGAACGCTGAGCAAAGGGGCCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTCTAGCACTGAGGCCATaGGGGAGTTGGTCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSLALRP*GSWSKP Trigger: TGGCTTTGACCAACTCCCCAATGGCCTCAGTGCTAG...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAACTACCTCCGATGTGGTaGCTGGCCTCCAAGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQLPPMW*LASKMV Trigger: AACCATCTTGGAGGCCAGCAACCACATCGGAGGTAG...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGAGCAGCTGGCTGCAGTaGGATGTCTTCCTATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLYALALLFPIERGSESSWLQ*DVFLCG Trigger: ACCACATAGGAAGACATCCAACTGCAGCCAGCTGCT...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | TCCCTGCCTTTGTATGCCCTGGCTCTGCTATTTCCCATAGAGAGAGGGAGTGAGTACCAGCCTTCTTCCTaGTTTCTGAGTGTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLPLYALALLFPIERGSEYQPSS*FLSVTT Trigger: GGTGGTCACACTCAGAAACAAGGAAGAAGGCTGGTA...CTCACTCCCTCTCTCTATGGGAAATAGCAGAGCCAGGGCATACAAAGGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTTACATAACCTTAACCTaGGGCCCGTCTCTCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSYITLT*GPSLTT Trigger: AGTGGTGAGAGACGGGCCCAAGGTTAAGGTTATGTA...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAAGGTCTGTGACAGTTTaGTTCTTCTCTGAGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQRSVTV*FFSEGL Trigger: GAGGCCCTCAGAGAAGAACAAAACTGTCACAGACCT...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | ATAGGGGGTGGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAATTTTGGAGAAGATGCTaGCAATCCTCAGAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IGGGVSCSFPVGLLLVDQFWRRC*QSSETP Trigger: TGGAGTCTCTGAGGATTGCAAGCATCTTCTCCAAAA...TTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACCACCCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS-3UTR CAA 90 bp | GGTGTCTCTTGTAGCTTCCCAGTTGGGCTTCTGCTTGTAGACCAAGGGACCAGTGAAAATTGGTCACTTTaGGAGAAGATGCTTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GVSCSFPVGLLLVDQGTSENWSL*EKMLAI Trigger: GATTGCAAGCATCTTCTCCAAAAGTGACCAATTTTC...ACTGGTCCCTTGGTCTACAAGCAGAAGCCCAACTGGGAAGCTACAAGAGACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS GCA 72 bp | AAGAGCCGTATGTCCTCGAGTGGCCTCCTTGTCCACTaGAGCCTGAATGTTGCAGGAGGCCCGGATGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KSRMSSSGLLVH*SLNVAGGPDAR Trigger: TCGGGCATCCGGGCCTCCTGCAACATTCAGGCTGCAGTGGACAAGGAGGCCACTCGAGGACATACGGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | CGCAGGGCATGTGTTTTCTCTCGGGACAGAGGTGGCTaGAAGGTGATGAGGCGAGTGGCCTTGGCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRACVFSRDRGG*KVMRRVALAEA Trigger: TGCCTCAGCCAAGGCCACTCGCCTCATCACCTTCCAGCCACCTCTGTCCCGAGAGAAAACACATGCCCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS TCA 72 bp | GTATGTCCTCGAGTGGCCTCCTTGTCCACTGCAGCCTaGATGTTGCAGGAGGCCCGGATGCCCGACTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VCPRVASLSTAA*MLQEARMPDLM Trigger: CATCAAGTCGGGCATCCGGGCCTCCTGCAACATTCAGGCTGCAGTGGACAAGGAGGCCACTCGAGGACATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS GCA 72 bp | TGTGCGGCAGGCAGGTATGCTCCCCAGCAAAGTAGATaGGGCCCTCTGGCTGGGAGAGCTGCTTCGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: CAAGRYAPQQSR*GPLAGRAASNS Trigger: ACTATTCGAAGCAGCTCTCCCAGCCAGAGGGCCGCATCTACTTTGCTGGGGAGCATACCTGCCTGCCGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | CACAGTGAAAGAGGCCAGCAGGACTCCCTTGCCGCCTaGCAGGCTGTGGCTGGGATAGTAAATGAAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: HSERGQQDSLAA*QAVAGIVNEAG Trigger: TCCCGCTTCATTTACTATCCCAGCCACAGCCTGCCAGGCGGCAAGGGAGTCCTGCTGGCCTCTTTCACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS TCA 72 bp | TCAGGGCAGCAAAGAAGGAGGAATCATCACCCACAGTaGAAGAGGCCAGCAGGACTCCCTTGCCGCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGQQRRRNHHPQ*KRPAGLPCRLA Trigger: TGCCAGGCGGCAAGGGAGTCCTGCTGGCCTCTTTCACTGTGGGTGATGATTCCTCCTTCTTTGCTGCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | TCGCTGACTTTGGGCACATGCGCTTTAGCTCCTCCTTaGGTATGCGGTGCACTGCCGCAAGGTCATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLTLGTCALAPP*VCGALPQGHPA Trigger: TGCTGGATGACCTTGCGGCAGTGCACCGCATACCCAAGGAGGAGCTAAAGCGCATGTGCCCAAAGTCAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | CGGATGGTGCCAGGCTTCAGGCTAGCACTGAGGCCATaGGGGAGTTGGTCAAAGCCACCGGTGATCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RMVPGFRLALRP*GSWSKPPVISE Trigger: TTCAGAGATCACCGGTGGCTTTGACCAACTCCCCAATGGCCTCAGTGCTAGCCTGAAGCCTGGCACCATCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | ATCGCTGACTTTGGGCACATGCGCTTTAGCTCCTCCTaGGGTATGCGGTGCACTGCCGCAAGGTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IADFGHMRFSSS*GMRCTAARSSS Trigger: GCTGGATGACCTTGCGGCAGTGCACCGCATACCCAAGGAGGAGCTAAAGCGCATGTGCCCAAAGTCAGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 90 bp | TGCAGTGCAGAGGTGGGCCCATCTGTGCGGTACATAACCTTAACCTaGGGCCCGTCTCTCACCACTCTTTCTACTTTGGACCCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: CSAEVGPSVRYITLT*GPSLTTLSTLDPRR Trigger: CCGTCTGGGGTCCAAAGTAGAAAGAGTGGTGAGAGACGGGCCCAAGGTTAAGGTTATGTACCGCACAGATGGGCCCACCTCTGCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS TCA 72 bp | CCGATGTGGTTGCTGGCCTCCAAGATGGTTACCTCGTaGCCAGCATCCTGTAGGGTCTTAGCTGCCACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PMWLLASKMVTS*PASCRVLAATR Trigger: CCTAGTGGCAGCTAAGACCCTACAGGATGCTGGTCACGAGGTAACCATCTTGGAGGCCAGCAACCACATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 90 bp | GATGCGGCCCTCTGGCTGGGAGAGCTGCTTCGAATAGTCTACAAATaGGTAGGGTGTGAACTCTGTAAAGGCGCCAATGGTGAGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DAALWLGELLRIVYK*VGCELCKGANGEGV Trigger: GACCCCCTCACCATTGGCGCCTTTACAGAGTTCACACCCTACCAATTTGTAGACTATTCGAAGCAGCTCTCCCAGCCAGAGGGCCGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS GCA 72 bp | GTAAAGGCGCCAATGGTGAGGGGGTCTAGAGACCAGTaGTTGATCGCTGACTTTGGGCACATGCGCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKAPMVRGSRDQ*LIADFGHMRFS Trigger: GCTAAAGCGCATGTGCCCAAAGTCAGCGATCAAGCACTGGTCTCTAGACCCCCTCACCATTGGCGCCTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | TTAACCTTGGGCCCGTCTCTCACCACTCTTTCTACTTaGGACCCCAGACGGATGGTGCCAGGCTTCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LTLGPSLTTLST*DPRRMVPGFRL Trigger: TAGCCTGAAGCCTGGCACCATCCGTCTGGGGTCCAAAGTAGAAAGAGTGGTGAGAGACGGGCCCAAGGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 90 bp | TACATAACCTTAACCTTGGGCCCGTCTCTCACCACTCTTTCTACTTaGGACCCCAGACGGATGGTGCCAGGCTTCAGGCTAGCACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YITLTLGPSLTTLST*DPRRMVPGFRLALR Trigger: CCTCAGTGCTAGCCTGAAGCCTGGCACCATCCGTCTGGGGTCCAAAGTAGAAAGAGTGGTGAGAGACGGGCCCAAGGTTAAGGTTATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | CCAGGCTTCAGGCTAGCACTGAGGCCATTGGGGAGTTaGTCAAAGCCACCGGTGATCTCTGAAAATTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGFRLALRPLGS*SKPPVISENWS Trigger: TGACCAATTTTCAGAGATCACCGGTGGCTTTGACCAACTCCCCAATGGCCTCAGTGCTAGCCTGAAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | GAGGTGGGCCCATCTGTGCGGTACATAACCTTAACCTaGGGCCCGTCTCTCACCACTCTTTCTACTTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVGPSVRYITLT*GPSLTTLSTLD Trigger: GTCCAAAGTAGAAAGAGTGGTGAGAGACGGGCCCAAGGTTAAGGTTATGTACCGCACAGATGGGCCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 90 bp | TCTGGGATTCGCATTGGTCCAAGTTCTAAGTACCAGCCTTCTTCCTaGTTTCTGAGTGTGACCACCCTACCTCCGATGTGGTTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGIRIGPSSKYQPSS*FLSVTTLPPMWLLA Trigger: GGCCAGCAACCACATCGGAGGTAGGGTGGTCACACTCAGAAACAAGGAAGAAGGCTGGTACTTAGAACTTGGACCAATGCGAATCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | CTTTGCTCAGCGTTCCTTCCTTCATCAGGTAAGCCTTaGTGGAGTAAGAGTCATAAAGGGAGAGCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCSAFLPSSGKP*WSKSHKGRAAG Trigger: GCCAGCTGCTCTCCCTTTATGACTCTTACTCCACCAAGGCTTACCTGATGAAGGAAGGAACGCTGAGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | CGCATTGGTCCAAGTTCTAAGTACCAGCCTTCTTCCTaGTTTCTGAGTGTGACCACCCTACCTCCGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RIGPSSKYQPSS*FLSVTTLPPMW Trigger: CCACATCGGAGGTAGGGTGGTCACACTCAGAAACAAGGAAGAAGGCTGGTACTTAGAACTTGGACCAATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS GCA 72 bp | CATTCATTATATCCCCGATCATCTCGATGGCCCCTTTaGTCAGCGTTCCTTCCTTCATCAGGTAAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HSLYPRSSRWPL*SAFLPSSGKPW Trigger: CCAAGGCTTACCTGATGAAGGAAGGAACGCTGAGCAAAGGGGCCATCGAGATGATCGGGGATATAATGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | GGAGAGCAGCTGGCTGCAGTTGGATGTCTTCCTATGTaGTTTGATCTTAGTGATGGCTTGGTAGAACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GEQLAAVGCLPM*FDLSDGLVEQV Trigger: GACCTGTTCTACCAAGCCATCACTAAGATCAAACCACATAGGAAGACATCCAACTGCAGCCAGCTGCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 72 bp | CTCTGGCTGGGAGAGCTGCTTCGAATAGTCTACAAATaGGTAGGGTGTGAACTCTGTAAAGGCGCCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LWLGELLRIVYK*VGCELCKGANG Trigger: ACCATTGGCGCCTTTACAGAGTTCACACCCTACCAATTTGTAGACTATTCGAAGCAGCTCTCCCAGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CAA 90 bp | GGGAGTTGGTCAAAGCCACCGGTGATCTCTGAAAATTGGTCACTTTaGGAGAAGATGCTTGCAATCCTCAGAGACTCCAGGAGGGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: GSWSKPPVISENWSL*EKMLAILRDSRRDL Trigger: TAAGTCCCTCCTGGAGTCTCTGAGGATTGCAAGCATCTTCTCCAAAAGTGACCAATTTTCAGAGATCACCGGTGGCTTTGACCAACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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| CDS CCA 72 bp | CAGCATTCTCATTCATTATATCCCCGATCATCTCGATaGCCCCTTTGCTCAGCGTTCCTTCCTTCATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QHSHSLYPRSSR*PLCSAFLPSSG Trigger: ACCTGATGAAGGAAGGAACGCTGAGCAAAGGGGCCATCGAGATGATCGGGGATATAATGAATGAGAATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
||
| CDS CCA 72 bp | GGGAGTTGGTCAAAGCCACCGGTGATCTCTGAAAATTaGTCACTTTTGGAGAAGATGCTTGCAATCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSWSKPPVISEN*SLLEKMLAILR Trigger: TCTGAGGATTGCAAGCATCTTCTCCAAAAGTGACCAATTTTCAGAGATCACCGGTGGCTTTGACCAACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
||
| CDS CAA 72 bp | TCAAAGCCACCGGTGATCTCTGAAAATTGGTCACTTTaGGAGAAGATGCTTGCAATCCTCAGAGACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKPPVISENWSL*EKMLAILRDSR Trigger: CCTGGAGTCTCTGAGGATTGCAAGCATCTTCTCCAAAAGTGACCAATTTTCAGAGATCACCGGTGGCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
||
| CDS CAA 72 bp | GGATGTCTTCCTATGTGGTTTGATCTTAGTGATGGCTaGGTAGAACAGGTCTGTGACAGTTTTGTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCLPMWFDLSDG*VEQVCDSFVLL Trigger: GAGAAGAACAAAACTGTCACAGACCTGTTCTACCAAGCCATCACTAAGATCAAACCACATAGGAAGACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058651.5 |
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