Pregenerated sensors for LANCL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047344Ensembl transcript IDs: ENSMUST00000069763.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGTGAAGAGCCAGGGAGTTCATTCCACTCTTACTATAATAGGATaGAATGGAGCAACATTCTTTCGAGAACCATTTCAAGTTTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: EVKSQGVHSTLTIIG*NGATFFREPFQVFS Trigger: TGAGAAAACTTGAAATGGTTCTCGAAAGAATGTTGCTCCATTTCATCCTATTATAGTAAGAGTGGAATGAACTCCCTGGCTCTTCACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTTCTGATGGTGGGCCTAGGGCCTAGGGCAGCACGCATGCTAGGTAAGTCTCTGCATATTGACAGTTaGTCCTATTGGTGTTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LFLMVGLGPRAARMLGKSLHIDS*SYWCSA Trigger: TGCTGAACACCAATAGGAGCAACTGTCAATATGCAG...AGACTTACCTAGCATGCGTGCTGCCCTAGGCCCTAGGCCCACCATCAGAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTTCTGATGGTGGGCCTAGGGCCTAGGGCAGCACGCATGCTAGGTAAGTCTTTTTTAGATGAGTTGTaGCATCTTGGTTTGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LFLMVGLGPRAARMLGKSFLDEL*HLGLTG Trigger: GCCTGTCAAACCAAGATGCCACAACTCATCTAAAAA...AGACTTACCTAGCATGCGTGCTGCCCTAGGCCCTAGGCCCACCATCAGAAACAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGGGGACTTCCACTGACTaGAAGGGGAGATGGAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSRTISSFLTPCLSQTSMGTSTD*KGRWNL Trigger: AAGGTTCCATCTCCCCTTGCAGTCAGTGGAAGTCCC...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGAAATCCTTGACAGGCTCTCTCTaGAGTCTGGCATCACGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RTISSFLTPCLSQTSMKSLTGSL*SLASRC Trigger: ACAGCGTGATGCCAGACTGCAGAGAGAGCCTGTCAA...GGATTTCATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAGGGCAAAATTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTGCTCTCTCTGCAGTCTaGCATCACGCTGTCTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: NRAKFVSILAVFTSEFRGALSAV*HHAVFI Trigger: GATGAAGACAGCGTGATGCCAGACTGCAGAGAGAGC...ACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAATTTTGCCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTCTAAATGTGATGTCTGAACTTCAGTGGTTAAATATTAGGACTGTGGCATCAGGGGACTTCCACTaGCTGCAAGGGGAGATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLLNVMSELQWLNIRTVASGDFH*LQGEME Trigger: TTCCATCTCCCCTTGCAGTCAGTGGAAGTCCCCTGA...TGCCACAGTCCTAATATTTAACCACTGAAGTTCAGACATCACATTTAGAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGTCATGTCCTTCGTCTTaGCACTTGATCCCTGCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSRTISSFLTPCLSQTSMSCPSS*HLIPAN Trigger: GTTAGCAGGGATCAAGTGTCAAGACGAAGGACATGA...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTTGTGTTTGTAGCAGAAGTAAACTAGATATGGTGACTAGAATCAACTGGCATTGTGGCATCTTGGTTTaGCAGGCTCTCTCTGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TCVCSRSKLDMVTRINWHCGILV*QALSAV Trigger: GACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACA...ATGCCAGTTGATTCTAGTCACCATATCTAGTTTACTTCTGCTACAAACACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCATTGGTTCATATAGTTCCACAAGCCAGCACACACACAAATGTTTCCAGGCATCGGTGCTTTTTAGATaGGTTGTGGCATCTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SIGSYSSTSQHTHKCFQASVLFR*VVASWF Trigger: AAACCAAGATGCCACAACTCATCTAAAAAGCACCGA...TGCCTGGAAACATTTGTGTGTGTGCTGGCTTGTGGAACTATATGAACCAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGACCATTCTGTGGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGCTTTTCATGGTCTGCATATTaGCAGTTGCTCCTATTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KKTILWIASSLRLSKRCFSWSAY*QLLLLV Trigger: CACCAATAGGAGCAACTGTCAATATGCAGACCATGA...AAAGCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CAA 90 bp | AATAGGATCACACATACAACATGCATGGAAACCCACACAAATCCATaGGTTCATATAGTTCCACAAGCCAGCACACACACAAATGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NRITHTTCMETHTNP*VHIVPQASTHTNVS Trigger: GGAAACATTTGTGTGTGTGCTGGCTTGTGGAACTATATGAACCAATGGATTTGTGTGGGTTTCCATGCATGTTGTATGTGTGATCCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | AACAGGGCAAAATTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTGATTACAAGGAAAACTaGCTAGAGGAGGTTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NRAKFVSILAVFTSEFRGDYKEN*LEEVQE Trigger: TTCCTGAACCTCCTCTAGGCAGTTTTCCTTGTAATC...ACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAATTTTGCCCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CAA 90 bp | AATTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATaGGGCATACATAGATGGTCACATTTGTTGCTCAGTTTTGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NSFRFWLSLLLNLGV*GIHRWSHLLLSFGS Trigger: ACTTCCAAAACTGAGCAACAAATGTGACCATCTATGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAATCACTCTACCACAACTTCAAAAGGTAGTTCCAGTTGTTTGTAAAGCTCCTGACAGTTGCTCCTATTaGTGTTCAGCAATCCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: IITLPQLQKVVPVVCKAPDSCSY*CSAIHY Trigger: ATAGTGGATTGCTGAACACCAATAGGAGCAACTGTC...AGGAGCTTTACAAACAACTGGAACTACCTTTTGAAGTTGTGGTAGAGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACATTTTCTAGTTCACTTTTaGCTTTTGTGTCACAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: SFRFWLSLLLNLGVLGIHFLVHF*LLCHKL Trigger: CAGTTTGTGACACAAAAGGCAAAAGTGAACTAGAAA...ATGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTCTAAATGTGATGTCTGAACTTCAGTGGTTAAATATTAGGACTGTGGCAGATGGTCACATTTGTTaGTCAGTTTTGGAAGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CLLNVMSELQWLNIRTVADGHIC*SVLEVL Trigger: CAACACTTCCAAAACTGAGCAACAAATGTGACCATC...TGCCACAGTCCTAATATTTAACCACTGAAGTTCAGACATCACATTTAGAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTCTAAATGTGATGTCTGAACTTCAGTGGTTAAATATTAGGACTGTGGCAGAAACATTAAATCGGTaGTTTTTAGATGAGTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLLNVMSELQWLNIRTVAETLNR*FLDELW Trigger: CCACAACTCATCTAAAAAGCACCGATTTAATGTTTC...TGCCACAGTCCTAATATTTAACCACTGAAGTTCAGACATCACATTTAGAAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTATACTTTCTTTGACTAGTTATAAATCTCCAGGTGGTACTTACAGAAAGTTTGTTGCTCAGTTTTaGAAGTGTTGGCATTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: LCILSLTSYKSPGGTYRKFVAQF*KCWHFI Trigger: GATAAAATGCCAACACTTCCAAAACTGAGCAACAAA...CTTTCTGTAAGTACCACCTGGAGATTTATAACTAGTCAAAGAAAGTATACACAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR TCA 72 bp | TCATCCATCTGGCAGCAATGGGAAGGCTCATGGTCGTaGGACCATTGGATGTGGATTACAAGGAAAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSIWQQWEGSWS*DHWMWITRKTA Trigger: GGCAGTTTTCCTTGTAATCCACATCCAATGGTCTCACGACCATGAGCCTTCCCATTGCTGCCAGATGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR GCA 72 bp | GATGAGTTGTGGCATCTTGGTTTGACAGGCTCTCTCTaGAGTCTGGCATCACGCTGTCTTCATCAGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DELWHLGLTGSL*SLASRCLHQTH Trigger: ATGAGTCTGATGAAGACAGCGTGATGCCAGACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACAACTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR GCA 72 bp | GTCGTGAGACCATTGGATGTGGATTACAAGGAAAACTaGCTAGAGGAGGTTCAGGAAATCTCAGGGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVRPLDVDYKEN*LEEVQEISGDF Trigger: GAAGTCCCCTGAGATTTCCTGAACCTCCTCTAGGCAGTTTTCCTTGTAATCCACATCCAATGGTCTCACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR GCA 72 bp | GGACTGTGGCAATCTCATGGTCTGCATATTGACAGTTaGTCCTATTGGTGTTCAGCAATCCACTATGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: GLWQSHGLHIDS*SYWCSAIHYGL Trigger: AAGTCCATAGTGGATTGCTGAACACCAATAGGAGCAACTGTCAATATGCAGACCATGAGATTGCCACAGTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CCA 72 bp | GCATGCCATTGTCCGTCCAAAAAGAAGACCATTCTGTaGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ACHCPSKKKTIL*IASSLRLSKRC Trigger: GCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTTTTTGGACGGACAATGGCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGCAACATTCTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCTCTCTGATCTTGAGTaGGCCATCTCTCCCCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MEQHSFENHFKFSHPMSFLSDLE*AISPLK Trigger: TTTCAGGGGAGAGATGGCCAACTCAAGATCAGAGAG...GAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAGAATGTTGCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CCA 72 bp | CCTGAAACATTAAATCGGTGCTTTTTAGATGAGTTGTaGCATCTTGGTTTGACAGGCTCTCTCTGCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PETLNRCFLDEL*HLGLTGSLCSL Trigger: CAGACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACAACTCATCTAAAAAGCACCGATTTAATGTTTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCACTCTACCACAACTTCAAAAGGTAGTTCCAGTTGTTTGTAAAGCTCCTTTGTGGCATCTTGGTTaGACAGGCTCTCTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: IITLPQLQKVVPVVCKAPLWHLG*TGSLCS Trigger: ACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACAA...AGGAGCTTTACAAACAACTGGAACTACCTTTTGAAGTTGTGGTAGAGTGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGCTGAATTTAGGGGTATaGGGCATACATAGATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSRTISSFLTPCLSQTSMLNLGV*GIHRWS Trigger: TGACCATCTATGTATGCCCAATACCCCTAAATTCAG...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR TCA 72 bp | AATATTAGGACTGTGGCAATCTCATGGTCTGCATATTaGCAGTTGCTCCTATTGGTGTTCAGCAATCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: NIRTVAISWSAY*QLLLLVFSNPL Trigger: TAGTGGATTGCTGAACACCAATAGGAGCAACTGTCAATATGCAGACCATGAGATTGCCACAGTCCTAATATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGCATAGATGGTCACATTaGTTGCTCAGTTTTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRTISSFLTPCLSQTSMHRWSH*LLSFGS Trigger: ACTTCCAAAACTGAGCAACAAATGTGACCATCTATG...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGACCATTCTGTGGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGCTTTACCCACACAAATCCATaGGTTCATATAGTTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KKTILWIASSLRLSKRCFTHTNP*VHIVPQ Trigger: TTGTGGAACTATATGAACCAATGGATTTGTGTGGGT...AAAGCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGTTCATTCCACTCTTACTATAATAGGATGAAATGGAGCAACATTCTTTCGTGCTTTTTAGATGAGTaGTGGCATCTTGGTTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GSSFHSYYNRMKWSNILSCFLDE*WHLGLT Trigger: TGTCAAACCAAGATGCCACAACTCATCTAAAAAGCA...CGAAAGAATGTTGCTCCATTTCATCCTATTATAGTAAGAGTGGAATGAACTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGTTCATTCCACTCTTACTATAATAGGATGAAATGGAGCAACATTCTTTCGAGATGGTCACATTTGTaGCTCAGTTTTGGAAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSSFHSYYNRMKWSNILSRWSHL*LSFGSV Trigger: AACACTTCCAAAACTGAGCAACAAATGTGACCATCT...CGAAAGAATGTTGCTCCATTTCATCCTATTATAGTAAGAGTGGAATGAACTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR TCA 72 bp | CAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATaGAATCCAGAAATGACTTACCTTTGTGGTAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QVFSPHVFPRLL*NPEMTYLCGKL Trigger: TAACTTACCACAAAGGTAAGTCATTTCTGGATTTCATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR GCA 72 bp | GGTCCTCTTTTCCAAAATAGGATCACACATACAACATaGATGGAAACCCACACAAATCCATTGGTTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: GPLFQNRITHTT*METHTNPLVHI Trigger: TATATGAACCAATGGATTTGTGTGGGTTTCCATGCATGTTGTATGTGTGATCCTATTTTGGAAAAGAGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | TCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACATGGAGGCACGCGTCGATaGGGCGCTTGGCGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRFWLSLLLNLGVLGIHGGTRR*GAWRSA Trigger: TGCGCTTCGCCAAGCGCCTCATCGACGCGTGCCTCC...ATGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGTCCTGGGCGAGCTTCTaGTTGAGCACGAGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSRTISSFLTPCLSQTSMSWASF*LSTSAA Trigger: CGCCGCGCTCGTGCTCAAGCAGAAGCTCGCCCAGGA...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | AACAGGGCAAAATTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTCGTGGTAGACCAGCGTaGCCACCGCATACACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NRAKFVSILAVFTSEFRGRGRPA*PPHTRP Trigger: CGGGCGTGTATGCGGTGGCCACGCTGGTCTACCACG...ACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAATTTTGCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTGATGGTGGGCCTAGGGCCTAGGGCAGCACGCATGCTAGGTAAGTCTTGCTTTAATTTGTGTTaGGGTCAATACCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLMVGLGPRAARMLGKSCFNLC*GQYLLG Trigger: GCCCAGGAGGTATTGACCCCAACACAAATTAAAGCA...AGACTTACCTAGCATGCGTGCTGCCCTAGGCCCTAGGCCCACCATCAGAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGTTCATTCCACTCTTACTATAATAGGATGAAATGGAGCAACATTCTTTCGGTTCGATGGTGGAGGTaGCCAAGGGCGCCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSFHSYYNRMKWSNILSVRWWR*PRAPLP Trigger: AGGCAGTGGCGCCCTTGGTCACCTCCACCATCGAAC...CGAAAGAATGTTGCTCCATTTCATCCTATTATAGTAAGAGTGGAATGAACTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | GCAATGGGAAGGCTCATGGTCGTGAGACCATTGGATGTGGATTACAAGGAAAACGGAAGACATAGGCACTaGCAGCTACACCATGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMGRLMVVRPLDVDYKENGRHRH*QLHHGK Trigger: TTTGCCATGGTGTAGCTGGCAGTGCCTATGTCTTCC...GTTTTCCTTGTAATCCACATCCAATGGTCTCACGACCATGAGCCTTCCCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CAA 72 bp | AATCGGTGCTTTTTAGATGAGTTGTGGCATCTTGGTTaGACAGGCTCTCTCTGCAGTCTGGCATCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRCFLDELWHLG*TGSLCSLASRC Trigger: ACAGCGTGATGCCAGACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACAACTCATCTAAAAAGCACCGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | AGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGAAATCCGGAGCATCTGGAGAATaGACGACAGGCCGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTISSFLTPCLSQTSMKSGASGE*TTGREL Trigger: CAGCTCACGGCCTGTCGTCCATTCTCCAGATGCTCC...GGATTTCATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | TCCATTGGTTCATATAGTTCCACAAGCCAGCACACACACAAATGTTTCCAGGCACATTCTCTCTCTCGATaGTCTCGCCAAGCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIGSYSSTSQHTHKCFQAHSLSR*SRQALV Trigger: CACCAGAGCTTGGCGAGACCATCGAGAGAGAGAATG...TGCCTGGAAACATTTGTGTGTGTGCTGGCTTGTGGAACTATATGAACCAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | TTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACATCTGCTCCTGTTCCATaGGGAAATCCACGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVSILAVFTSEFRGIGHTSAPVP*GNPRSA Trigger: GGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGA...TGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCAACATTCTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCGGTCTCGCCAAGCTCTaGTGGCCAGTTGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MEQHSFENHFKFSHPMSFGLAKL*WPVAIL Trigger: CAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACC...GAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAGAATGTTGCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | TTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACAGCGCCGTGGCACCAGTaGACAAGTTCATTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVSILAVFTSEFRGIGHTAPWHQ*TSSFSL Trigger: GAGAGAGAATGAACTTGTCCACTGGTGCCACGGCGC...TGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | AGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGAAATCCATTCCTGGAGCGCCGTaGCACCAGTGGACAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTISSFLTPCLSQTSMKSIPGAP*HQWTSS Trigger: TGAACTTGTCCACTGGTGCCACGGCGCTCCAGGAAT...GGATTTCATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | TTCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACAACCATGGCAAATCCCTaGCCCCTTCTTCAACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVSILAVFTSEFRGIGHTTMANP*PLLQQA Trigger: GGCCTGTTGAAGAAGGGGCCAGGGATTTGCCATGGT...TGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | AAGAAGACCATTCTGTGGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGCTTTCCCGATCTGAAGGTTTaGGATGCTCCTGGTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKTILWIASSLRLSKRCFPDLKV*DAPGRK Trigger: TTTCCTACCAGGAGCATCTCAAACCTTCAGATCGGG...AAAGCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | TCCATTGGTTCATATAGTTCCACAAGCCAGCACACACACAAATGTTTCCAGGCAGCTGCAGTAGATCAATaGGAAAGCAAACAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIGSYSSTSQHTHKCFQAAAVDQ*ESKQFQ Trigger: CTGGAACTGTTTGCTTTCTCATTGATCTACTGCAGC...TGCCTGGAAACATTTGTGTGTGTGCTGGCTTGTGGAACTATATGAACCAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | TCCATTGGTTCATATAGTTCCACAAGCCAGCACACACACAAATGTTTCCAGGCACATGTGTCCAGGTACTaGGGTTTCTTGGAAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIGSYSSTSQHTHKCFQAHVSRY*GFLEMR Trigger: TCTCATTTCCAAGAAACCGCAGTACCTGGACACATG...TGCCTGGAAACATTTGTGTGTGTGCTGGCTTGTGGAACTATATGAACCAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| 3UTR CAA 72 bp | TCCCCTGAAACATTAAATCGGTGCTTTTTAGATGAGTaGTGGCATCTTGGTTTGACAGGCTCTCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPETLNRCFLDE*WHLGLTGSLCS Trigger: ACTGCAGAGAGAGCCTGTCAAACCAAGATGCCACAACTCATCTAAAAAGCACCGATTTAATGTTTCAGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | CTGTGTATACTTTCTTTGACTAGTTATAAATCTCCAGGTGGTACTTACAGAAAGCACCAGCTCCCGATCTaGAGGTTTGAGATGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCILSLTSYKSPGGTYRKHQLPI*RFEMLL Trigger: CAGGAGCATCTCAAACCTTCAGATCGGGAGCTGGTG...CTTTCTGTAAGTACCACCTGGAGATTTATAACTAGTCAAAGAAAGTATACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | TCGTTTCGATTCTGGCTGTCTTTACTTCTGAATTTAGGGGTATTGGGCATACATGGCCAGTTGCAATTCTaGTCCTGTTCCATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFRFWLSLLLNLGVLGIHGQLQF*SCSMRK Trigger: TTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCC...ATGTATGCCCAATACCCCTAAATTCAGAAGTAAAGACAGCCAGAATCGAAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | ATACATAGATGGTCACATTTGTTGCTCAGTTTTGGAAGTGTTGGCATTTTATCCGCTCTGGTGGCCAGTTaGAATTCTGCTCCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHRWSHLLLSFGSVGILSALVAS*NSAPVP Trigger: TGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGC...GGATAAAATGCCAACACTTCCAAAACTGAGCAACAAATGTGACCATCTATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTGATGTTTGAGATGATCGATTTTCACCGAGAGCATAGTTTACAATCTAATTTCAACAGGCCTTTCTaGCATGTCAGCTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLMFEMIDFHREHSLQSNFNRPF*HVSSPH Trigger: GTGTGGGGAGCTGACATGGCAGAAAGGCCTGTTGAA...ATTAGATTGTAAACTATGCTCTCGGTGAAAATCGATCATCTCAAACATCAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | AAGAAGACCATTCTGTGGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGCTTTTTCTTCAGAGCATACTaGTTCCCAGAGTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KKTILWIASSLRLSKRCFFFRAY*FPESRI Trigger: GATTCTGGACTCTGGGAAGCAGTATGCTCTGAAGAA...AAAGCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTTCTAAATGTGATGTCTGAACTTCAGTGGTTAAATATTAGGACTGTGGCACGTACAAGCTGTAGATaGTTTCAAGGACCCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLLNVMSELQWLNIRTVARTSCR*FQGPGN Trigger: GTTCCCGGGTCCTTGAAAGCATCTACAGCTTGTACG...TGCCACAGTCCTAATATTTAACCACTGAAGTTCAGACATCACATTTAGAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCTAAATGTGATGTCTGAACTTCAGTGGTTAAATATTAGGACTGTGGCATCAGTGAATAAGAACTaGGCAAACCTTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNVMSELQWLNIRTVASVNKN*ANLWAR Trigger: CCGTGCCCAAAGGTTTGCTCAGTTCTTATTCACTGA...TGCCACAGTCCTAATATTTAACCACTGAAGTTCAGACATCACATTTAGAAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CCA 90 bp | AAGAAGACCATTCTGTGGATAGCATCTTCCTTAAGGCTTTCCAAAAGGTGCTTTATACATCAGGGGGAATaGTTTTCTCTTCTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKTILWIASSLRLSKRCFIHQGE*FSLLQS Trigger: GCTCTGAAGAAGAGAAAACCATTCCCCCTGATGTAT...AAAGCACCTTTTGGAAAGCCTTAAGGAAGATGCTATCCACAGAATGGTCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR TCA 90 bp | ACCCTGATGTTTGAGATGATCGATTTTCACCGAGAGCATAGTTTACAATCTAATGCGGTTTCTTGGAAATaGGATAAGCTTTGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLMFEMIDFHREHSLQSNAVSWK*DKLWQT Trigger: TGTTTGCCAAAGCTTATCTCATTTCCAAGAAACCGC...ATTAGATTGTAAACTATGCTCTCGGTGAAAATCGATCATCTCAAACATCAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 90 bp | TCTCTCTCGATGGTCTCGCCAAGCTCTGGTGGCCAGTTGCAATTCTaGTCCTGTTCCATGAGGAAATCCACGCTCTGCCACACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSMVSPSSGGQLQF*SCSMRKSTLCHTSS Trigger: GGAGCTGGTGTGGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCATCGAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 90 bp | GCTACACCATGGCAAATCCCTGGCCCCTTCTTCAACAGGCCTTTCTaGCATGTCAGCTCCCCACACCGGATACATGTGTCCAGGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATPWQIPGPFFNRPF*HVSSPHRIHVSRYC Trigger: GCAGTACCTGGACACATGTATCCGGTGTGGGGAGCTGACATGGCAGAAAGGCCTGTTGAAGAAGGGGCCAGGGATTTGCCATGGTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 90 bp | CTGGAGCGCCGTGGCACCAGTGGACAAGTTCATTCTCTCTCTCGATaGTCTCGCCAAGCTCTGGTGGCCAGTTGCAATTCTGCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LERRGTSGQVHSLSR*SRQALVASCNSAPV Trigger: AACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCATCGAGAGAGAGAATGAACTTGTCCACTGGTGCCACGGCGCTCCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS TCA 90 bp | TCTCGCCAAGCTCTGGTGGCCAGTTGCAATTCTGCTCCTGTTCCATaGGGAAATCCACGCTCTGCCACACCAGCTCCCGATCTGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRQALVASCNSAPVP*GNPRSATPAPDLKV Trigger: AACCTTCAGATCGGGAGCTGGTGTGGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 90 bp | AAGAAGGAAGACATAGGCACTGCCAGCTACACCATGGCAAATCCCTaGCCCCTTCTTCAACAGGCCTTTCTGCCATGTCAGCTCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KKEDIGTASYTMANP*PLLQQAFLPCQLPT Trigger: TGTGGGGAGCTGACATGGCAGAAAGGCCTGTTGAAGAAGGGGCCAGGGATTTGCCATGGTGTAGCTGGCAGTGCCTATGTCTTCCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 90 bp | CTGGTAGGAAAGGAGCATCTGGAGAATGGACGACAGGCCGTGAGCTaGCCCCAGGTATTCTGTTCCGTAGTAAGAATACATCAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVGKEHLENGRQAVS*PQVFCSVVRIHQGE Trigger: TTCCCCCTGATGTATTCTTACTACGGAACAGAATACCTGGGGGCAGCTCACGGCCTGTCGTCCATTCTCCAGATGCTCCTTTCCTACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS TCA 90 bp | CTGTTCCATGAGGAAATCCACGCTCTGCCACACCAGCTCCCGATCTaGAGGTTTGAGATGCTCCTGGTAGGAAAGGAGCATCTGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFHEEIHALPHQLPI*RFEMLLVGKEHLEN Trigger: ATTCTCCAGATGCTCCTTTCCTACCAGGAGCATCTCAAACCTTCAGATCGGGAGCTGGTGTGGCAGAGCGTGGATTTCCTCATGGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CAA 90 bp | GCAATGGGAAGGCTCATGGTCGTGAGACCATTGGATGTGGATTACAAGGAAAACAGCTCTGGTGGCCAGTaGCAATTCTGCTCCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AMGRLMVVRPLDVDYKENSSGGQ*QFCSCS Trigger: GGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCT...GTTTTCCTTGTAATCCACATCCAATGGTCTCACGACCATGAGCCTTCCCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 90 bp | CTTCAGAGCATACTGCTTCCCAGAGTCCAGAATCGCCTGGCATATTaGTTTAATTTGTGTTGGGGTCAATACCTCCTGGGCGAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSILLPRVQNRLAY*FNLCWGQYLLGELL Trigger: CAGAAGCTCGCCCAGGAGGTATTGACCCCAACACAAATTAAAGCAATATGCCAGGCGATTCTGGACTCTGGGAAGCAGTATGCTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 90 bp | TTTCTCTTCTTCAGAGCATACTGCTTCCCAGAGTCCAGAATCGCCTaGCATATTGCTTTAATTTGTGTTGGGGTCAATACCTCCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLFFRAYCFPESRIA*HIALICVGVNTSWA Trigger: CGCCCAGGAGGTATTGACCCCAACACAAATTAAAGCAATATGCCAGGCGATTCTGGACTCTGGGAAGCAGTATGCTCTGAAGAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CAA 90 bp | GCAATGGGAAGGCTCATGGTCGTGAGACCATTGGATGTGGATTACAAGGAAAACACCCGGGAACCGGATTaGAATTCTTCAGTGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: AMGRLMVVRPLDVDYKENTREPD*NSSVNK Trigger: CTTATTCACTGAAGAATTCAAATCCGGTTCCCGGGT...GTTTTCCTTGTAATCCACATCCAATGGTCTCACGACCATGAGCCTTCCCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCGAGAACCATTTCAAGTTTTCTCACCCCATGTCTTTCCCAGACTTCTATGGCATATTGCTTTAATTaGTGTTGGGGTCAATACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRTISSFLTPCLSQTSMAYCFN*CWGQYL Trigger: GAGGTATTGACCCCAACACAAATTAAAGCAATATGC...CATAGAAGTCTGGGAAAGACATGGGGTGAGAAAACTTGAAATGGTTCTCGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 72 bp | TGGCAAATCCCTGGCCCCTTCTTCAACAGGCCTTTCTaGCATGTCAGCTCCCCACACCGGATACATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WQIPGPFFNRPF*HVSSPHRIHVS Trigger: GGACACATGTATCCGGTGTGGGGAGCTGACATGGCAGAAAGGCCTGTTGAAGAAGGGGCCAGGGATTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS TCA 72 bp | CCACGCTCTGCCACACCAGCTCCCGATCTGAAGGTTTaGGATGCTCCTGGTAGGAAAGGAGCATCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PRSATPAPDLKV*DAPGRKGASGE Trigger: TTCTCCAGATGCTCCTTTCCTACCAGGAGCATCTCAAACCTTCAGATCGGGAGCTGGTGTGGCAGAGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 72 bp | ATGGTCTCGCCAAGCTCTGGTGGCCAGTTGCAATTCTaGTCCTGTTCCATGAGGAAATCCACGCTCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MVSPSSGGQLQF*SCSMRKSTLCH Trigger: GTGGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 72 bp | GACATAGGCACTGCCAGCTACACCATGGCAAATCCCTaGCCCCTTCTTCAACAGGCCTTTCTGCCATGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DIGTASYTMANP*PLLQQAFLPCQ Trigger: CTGACATGGCAGAAAGGCCTGTTGAAGAAGGGGCCAGGGATTTGCCATGGTGTAGCTGGCAGTGCCTATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS TCA 72 bp | GAGGAAATCCACGCTCTGCCACACCAGCTCCCGATCTaGAGGTTTGAGATGCTCCTGGTAGGAAAGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: EEIHALPHQLPI*RFEMLLVGKEH Trigger: ATGCTCCTTTCCTACCAGGAGCATCTCAAACCTTCAGATCGGGAGCTGGTGTGGCAGAGCGTGGATTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 72 bp | CGTGGCACCAGTGGACAAGTTCATTCTCTCTCTCGATaGTCTCGCCAAGCTCTGGTGGCCAGTTGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGTSGQVHSLSR*SRQALVASCNS Trigger: AGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCATCGAGAGAGAGAATGAACTTGTCCACTGGTGCCACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CAA 72 bp | TCTCTCTCGATGGTCTCGCCAAGCTCTGGTGGCCAGTaGCAATTCTGCTCCTGTTCCATGAGGAAATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SLSMVSPSSGGQ*QFCSCSMRKST Trigger: CGTGGATTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCATCGAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CAA 90 bp | AGTTCATTCTCTCTCTCGATGGTCTCGCCAAGCTCTGGTGGCCAGTaGCAATTCTGCTCCTGTTCCATGAGGAAATCCACGCTCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSFSLSMVSPSSGGQ*QFCSCSMRKSTLCH Trigger: GTGGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGAATTGCAACTGGCCACCAGAGCTTGGCGAGACCATCGAGAGAGAGAATGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 72 bp | CAATTCTGCTCCTGTTCCATGAGGAAATCCACGCTCTaGCACACCAGCTCCCGATCTGAAGGTTTGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: QFCSCSMRKSTL*HTSSRSEGLRC Trigger: GCATCTCAAACCTTCAGATCGGGAGCTGGTGTGGCAGAGCGTGGATTTCCTCATGGAACAGGAGCAGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS GCA 72 bp | ATACTGCTTCCCAGAGTCCAGAATCGCCTGGCATATTaGTTTAATTTGTGTTGGGGTCAATACCTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLPRVQNRLAY*FNLCWGQYLLG Trigger: GCCCAGGAGGTATTGACCCCAACACAAATTAAAGCAATATGCCAGGCGATTCTGGACTCTGGGAAGCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||
| CDS CCA 72 bp | TTCAGAGCATACTGCTTCCCAGAGTCCAGAATCGCCTaGCATATTGCTTTAATTTGTGTTGGGGTCAATACC | + |
|
Preference number: 6 (lower is better) Translates to: FRAYCFPESRIA*HIALICVGVNT Trigger: GGTATTGACCCCAACACAAATTAAAGCAATATGCCAGGCGATTCTGGACTCTGGGAAGCAGTATGCTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069763.3 |
||