Pregenerated sensors for LANCL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062190Ensembl transcript IDs: ENSMUST00000050077.15, ENSMUST00000072954.8, ENSMUST00000153777.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCTGAGCTCTGCAGTGCACACTGACCTGCCCTTCATTCGGGTTTaGGAGGCTGCCTCTCACGCATGCCCATGGAAAATGCTAACATGT | + |
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Preference number: 1 (lower is better) Translates to: FLSSAVHTDLPFIRV*EAASHACPWKMLTC Trigger: ACATGTTAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAGTGTGCACTGCAGAGCTCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR CCA 90 bp | GTGACCCCTAAATCCTGGTTCACGTGCCATTTCTCCTTTACCTCATaGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTA | + |
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Preference number: 1 (lower is better) Translates to: VTPKSWFTCHFSFTS*DWGCSLMGCTAAHV Trigger: TACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAAATGGCACGTGAACCAGGATTTAGGGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR CCA 90 bp | CCTAAATCCTGGTTCACGTGCCATTTCTCCTTTACCTCATGGGATTaGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: PKSWFTCHFSFTSWD*GCSLMGCTAAHVVD Trigger: ATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAAATGGCACGTGAACCAGGATTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR TCA 90 bp | AGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTaGAATGCACATGTGTTGATACCTAGTGGTAAGCAGGAAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SSTCSGYNEGSQWRH*NAHVLIPSGKQEGV Trigger: GACACCTTCCTGCTTACCACTAGGTATCAACACATGTGCATTTCAGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
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| 3UTR TCA 90 bp | GAAAATGCTAACATGTATTCTCACAGGATATCTAGATCTGCTAGCTaGTGGTCAAGACAGACATCACACAACTGTTTCTGTGTTGATAGA | + |
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Preference number: 1 (lower is better) Translates to: ENANMYSHRISRSAS*WSRQTSHNCFCVDR Trigger: TCTATCAACACAGAAACAGTTGTGTGATGTCTGTCTTGACCATCAGCTAGCAGATCTAGATATCCTGTGAGAATACATGTTAGCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACAATGGCGTCACTGAAATaGACATGTGTTGATACCTTT | + |
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Preference number: 2 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTMASLK*TCVDTF Trigger: AAAGGTATCAACACATGTGCATTTCAGTGACGCCAT...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072954.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCTGCCTCTCACGCATGCCCATGGAAAATGCTAACATGTATTCTCACAGGATATACAAAAATGTGTaGCTGTCACCTTTAACACTC | + |
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Preference number: 2 (lower is better) Translates to: GGCLSRMPMENANMYSHRIYKNV*LSPLTL Trigger: GAGTGTTAAAGGTGACAGGCACACATTTTTGTATAT...CCTGTGAGAATACATGTTAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGAGAATGCTGATGACATaGTTTCTATCGCTCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: LAINYIDHKTHRGRRCQLRMLMT*FLSLML Trigger: GAGCATGAGCGATAGAAATCATGTCATCAGCATTCT...CAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACACTTTACCTCATGGGATaGGGGCTGCAGCCTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTLYLMG*GLQPHG Trigger: CCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAG...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR CCA 72 bp | TCTGCAGTGCACACTGACCTGCCCTTCATTCGGGTTTaGGAGGCTGCCTCTCACGCATGCCCATGGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: SAVHTDLPFIRV*EAASHACPWKM Trigger: CATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAGTGTGCACTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR CCA 72 bp | TGGTTCACGTGCCATTTCTCCTTTACCTCATGGGATTaGGGCTGCAGCCTCATGGGATGCACAGCAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: WFTCHFSFTSWD*GCSLMGCTAAH Trigger: ATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAAATGGCACGTGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR CCA 72 bp | AAATCCTGGTTCACGTGCCATTTCTCCTTTACCTCATaGGATTGGGGCTGCAGCCTCATGGGATGCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSWFTCHFSFTS*DWGCSLMGCTA Trigger: TGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAAATGGCACGTGAACCAGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR GCA 72 bp | CCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATaGCCATGGAAAATGCTAACATGTATTCTCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: PFIRVWEAASHA*PWKMLTCILTG Trigger: TCCTGTGAGAATACATGTTAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR CCA 72 bp | ATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATaGAAAATGCTAACATGTATTCTCACAGGATATCTA | + |
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Preference number: 3 (lower is better) Translates to: IRVWEAASHACP*KMLTCILTGYL Trigger: TAGATATCCTGTGAGAATACATGTTAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR TCA 72 bp | AAGGAAGTCAATGGCGTCACTGAAATGCACATGTGTTaGTACCTAGTGGTAAGCAGGAAGGTGTCAATCCAC | + |
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Preference number: 3 (lower is better) Translates to: KEVNGVTEMHMC*YLVVSRKVSIH Trigger: GTGGATTGACACCTTCCTGCTTACCACTAGGTATCAACACATGTGCATTTCAGTGACGCCATTGACTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
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| 3UTR CCA 72 bp | GGTTCTGTGTCAGGCACTAATCAATCAGGTGGCTTTTaGTCCAACGGGTATGTTAGTTGTCTTTTTGCACCT | + |
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Preference number: 3 (lower is better) Translates to: GSVSGTNQSGGF*SNGYVSCLFAP Trigger: AGGTGCAAAAAGACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACACAGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAATGTGTGCCTGTCACCTTTAACACTCACATGTGCTCAGCTAAGAGTTCATTCTAATTGGGGGTCTTaGCAACAAAGGGGGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: KNVCLSPLTLTCAQLRVHSNWGS*QQRGLV Trigger: CACAAGCCCCCTTTGTTGCAAAGACCCCCAATTAGA...ATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR TCA 72 bp | TGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTaGAATGCACATGTGTTGATACCTAGTGGTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSGYNEGSQWRH*NAHVLIPSGKQ Trigger: CTGCTTACCACTAGGTATCAACACATGTGCATTTCAGTGACGCCATTGACTTCCTTCGTTATATCCACTACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
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| 3UTR GCA 72 bp | CAAAAATGTGTGCCTGTCACCTTTAACACTCACATGTaGTCAGCTAAGAGTTCATGTAATGAGTGTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: QKCVPVTFNTHM*SAKSSCNECGF Trigger: AAAGCCACACTCATTACATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| 3UTR TCA 72 bp | AACATGTATTCTCACAGGATATCTAGATCTGCTAGCTaGTGGTCAAGACAGACATCACACAACTGTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: NMYSHRISRSAS*WSRQTSHNCFC Trigger: ACAGAAACAGTTGTGTGATGTCTGTCTTGACCATCAGCTAGCAGATCTAGATATCCTGTGAGAATACATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR CCA 90 bp | TTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTACCGGGTCTTCCGTGGTaGGGAGAGGGCAGACACGGC | + |
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Preference number: 4 (lower is better) Translates to: FTSWDWGCSLMGCTAAHVPGLPW*GEGRHG Trigger: GCCGTGTCTGCCCTCTCCCCACCACGGAAGACCCGG...TACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | CTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGAGGCGGCTTCATAGTCTaGGAAGGGATTGGGGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFGFGRLPLTHAHGGGFIV*EGIGER Trigger: TCGTTCCCCAATCCCTTCCCAGACTATGAAGCCGCC...TCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCGGCCCGGGTCTTCCGTaGTGGGGAGAGGGCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: CSLMGCTAAHVVDITKEVGPGLP*WGEGRH Trigger: GTGTCTGCCCTCTCCCCACCACGGAAGACCCGGGCC...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACACGGAGCAGACCTCGCTaGCAAATCACATCGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTRSRPR*QITSLH Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTCTGCTCCG...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | CTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATGCAGAGCAGTCATaGGGGTCCGCTGTCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LMGLGLQPHGMHSSTCSGYAEQS*GSAVFS Trigger: ACTGAAGACAGCGGACCCTCATGACTGCTCTGCATA...TCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGAGGCGCACATAATCAATaGTGGGTTTCACCATTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTCPSFGFGRLPLTHAHGGAHNQ*WVSPFR Trigger: CCGAAATGGTGAAACCCAGCATTGATTATGTGCGCC...TCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR CCA 90 bp | GCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCGGCCCGGGTCTTCCGTaGTGGGGAGAGGGCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: AINYIDHKTHRGRRCQLCGPGLP*WGEGRH Trigger: GTGTCTGCCCTCTCCCCACCACGGAAGACCCGGGCC...GCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR CCA 90 bp | TGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTCGGCCCGGGTCTTCCGTaGTGGGGAGAGGGCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: CQALINQVAFGPTGMLVVGPGLP*WGEGRH Trigger: GTGTCTGCCCTCTCCCCACCACGGAAGACCCGGGCC...GACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | TGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAATCTTCCCGTTAGGGTaGAAAGGGAGGCCCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WDWGCSLMGCTAAHVVDIIFPLG*KGRPGS Trigger: AGACCCGGGCCTCCCTTTCCACCCTAACGGGAAGAT...TATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| 3UTR CAA 72 bp | CTGGTTCACGTGCCATTTCTCCTTTACCTCATGGGATaGGGGCTGCAGCCTCATGGGATGCACAGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LVHVPFLLYLMG*GLQPHGMHSST Trigger: TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAAATGGCACGTGAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | CTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGATCTGTAGAAGTTTTGTaGTGCATTCCTGGGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: LTCPSFGFGRLPLTHAHGSVEVL*CIPGTH Trigger: GTGAGTCCCAGGAATGCATCACAAAACTTCTACAGA...TCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR CCA 90 bp | AGGTTTCTGTCCTGTCGTCTTCTTCTTTTAGGGTTTACAGTGGGTTCTGTGTCACCGGGTCTTCCGTGGTaGGGAGAGGGCAGACACGGC | + |
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Preference number: 4 (lower is better) Translates to: RFLSCRLLLLGFTVGSVSPGLPW*GEGRHG Trigger: GCCGTGTCTGCCCTCTCCCCACCACGGAAGACCCGG...TGACACAGAACCCACTGTAAACCCTAAAAGAAGAAGACGACAGGACAGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | GGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTCTTCTTCATCTTCCCGTTAGGGTaGAAAGGGAGGCCCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVFATKGACEGFCPVVFFIFPLG*KGRPGS Trigger: AGACCCGGGCCTCCCTTTCCACCCTAACGGGAAGAT...GAAGAAGACGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACAGCCAAGTTCAAATGCTaGAAACCGTGCTGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTAKFKC*KPCCLW Trigger: CCAGAGACAGCACGGTTTCCAGCATTTGAACTTGGC...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACACTCCTAGGTGGAACTTaGGTCTCTTTGACATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTLLGGT*VSLTWS Trigger: AGACCATGTCAAAGAGACTCAAGTTCCACCTAGGAG...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072954.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACAGGCGCACATAATCAATaGTGGGTTTCACCATTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLYLMGLGLQPHGMHSSTGAHNQ*WVSPFR Trigger: CCGAAATGGTGAAACCCAGCATTGATTATGTGCGCC...TGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGAAGGTCTGTCAGGAATaGGGCATCCATGTGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: WGCSLMGCTAAHVVDITKKVCQE*GIHVLR Trigger: ACGGAGCACATGGATGCCGCATTCCTGACAGACCTT...CTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCATCTTCCCGTTAGGGTaGAAAGGGAGGCCCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CSLMGCTAAHVVDITKEVIFPLG*KGRPGS Trigger: AGACCCGGGCCTCCCTTTCCACCCTAACGGGAAGAT...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | GGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAACTCCTGGAGCACCATaGCACCAGTGGACCAATCGA | + |
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Preference number: 4 (lower is better) Translates to: GCSLMGCTAAHVVDITKETPGAP*HQWTNR Trigger: TCGATTGGTCCACTGGTGCCATGGTGCTCCAGGAGT...TTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | TCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATGCCAAGTTCAAATGCTaGAAACCGTGCTGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SWDWGCSLMGCTAAHVVDAKFKC*KPCCLW Trigger: CCAGAGACAGCACGGTTTCCAGCATTTGAACTTGGC...ATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | GGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTCTTCTTCTATGCAGAGCAGTCATaGGGGTCCGCTGTCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GVFATKGACEGFCPVVFFYAEQS*GSAVFS Trigger: ACTGAAGACAGCGGACCCTCATGACTGCTCTGCATA...GAAGAAGACGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | CTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATCTGTAGAAGTTTTGTaGTGCATTCCTGGGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: LMGLGLQPHGMHSSTCSGSVEVL*CIPGTH Trigger: GTGAGTCCCAGGAATGCATCACAAAACTTCTACAGA...TCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR TCA 90 bp | CTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGAGGAAGCTCTGACTCTTaGCAGACAATAGTTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: LMGLGLQPHGMHSSTCSGGSSDS*QTIVLC Trigger: GCATAGAACTATTGTCTGTCAAGAGTCAGAGCTTCC...TCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAACTGTCTCACCAACAGTaGCAGGGCCAATCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GCSLMGCTAAHVVDITKELSHQQ*QGQSLC Trigger: ACACAGAGATTGGCCCTGGCACTGTTGGTGAGACAG...TTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | GTGCACACTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCGCACATAATCAATGCTaGGTTTCACCATTTCGGTTA | + |
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Preference number: 4 (lower is better) Translates to: VHTDLPFIRVWEAASHACAHNQC*VSPFRL Trigger: TAACCGAAATGGTGAAACCCAGCATTGATTATGTGC...GCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAGTGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
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| CDS-3UTR TCA 90 bp | TTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAATGTCAGAAAGGAAGTaGACAGCACCAGCCATACCT | + |
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Preference number: 4 (lower is better) Translates to: FTSWDWGCSLMGCTAAHVMSERK*TAPAIP Trigger: AGGTATGGCTGGTGCTGTTCACTTCCTTTCTGACAT...TACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTACTCCTGGAGCACCATaGCACCAGTGGACCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSGTNQSGGFWSNGYVTPGAP*HQWTNR Trigger: TCGATTGGTCCACTGGTGCCATGGTGCTCCAGGAGT...AACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACACAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATGCTGCAGAAGATCTTTaGTTTTGGTCTGGATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGLGLQPHGMHSSTCSGYAAEDL*FWSGYA Trigger: AGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGC...ATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCAGGTACAAAAGTGCTATaGCTGTCCAACCAGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: FSFTSWDWGCSLMGCTAAGTKVL*LSNQYM Trigger: CATATACTGGTTGGACAGGCATAGCACTTTTGTACC...TGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTCTGTCTCACCAACAGTaGCAGGGCCAATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSGTNQSGGFWSNGYVLSHQQ*QGQSLC Trigger: ACACAGAGATTGGCCCTGGCACTGTTGGTGAGACAG...AACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACACAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTCCGGAGCAGACCTCGCTaGCAAATCACATCGCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: CQALINQVAFGPTGMLVVRSRPR*QITSLH Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTCTGCTCCG...GACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATCGGAGCAGACCTCGCTaGCAAATCACATCGCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLMGCTAAHVVDITKEVNRSRPR*QITSLH Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTCTGCTCCG...ATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAAAAGCCAAGTTCAAATaGTGGAAACCGTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WDWGCSLMGCTAAHVVDIKAKFK*WKPCCL Trigger: GAGACAGCACGGTTTCCAGCATTTGAACTTGGCTTT...TATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTGAAGGCGGCTTCATAGTCTaGGAAGGGATTGGGGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: CTAAHVVDITKEVNGVTEGGFIV*EGIGER Trigger: TCGTTCCCCAATCCCTTCCCAGACTATGAAGCCGCC...TTCAGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAAGTCCTTCCTCCATCTaGTGCAGAAGATCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WDWGCSLMGCTAAHVVDISPSSI*CRRSLI Trigger: AATCAAAGATCTTCTGCAGCAGATGGAGGAAGGACT...TATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCTGTCTCACCAACAGTaGCAGGGCCAATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AINYIDHKTHRGRRCQLCLSHQQ*QGQSLC Trigger: ACACAGAGATTGGCCCTGGCACTGTTGGTGAGACAG...GCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTAAGGTCTGTCAGGAATaGGGCATCCATGTGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGTNQSGGFWSNGYVSCKVCQE*GIHVLR Trigger: ACGGAGCACATGGATGCCGCATTCCTGACAGACCTT...ACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTGAAAAGGTCTGTCAGGAATaGGGCATCCATGTGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CTAAHVVDITKEVNGVTEKVCQE*GIHVLR Trigger: ACGGAGCACATGGATGCCGCATTCCTGACAGACCTT...TTCAGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTCTTCTTCAAATGCTGGAAACCGTaGTGTCTCTGGTACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVFATKGACEGFCPVVFFKCWKP*CLWYQD Trigger: ATCTTGGTACCAGAGACAGCACGGTTTCCAGCATTT...GAAGAAGACGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCATTTGTGATGCATTCCTaGGACTCACATTCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFTSWDWGCSLMGCTAAFVMHS*DSHSLL Trigger: CAAAAGTGAATGTGAGTCCCAGGAATGCATCACAAA...TGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCATGCCAGCCATACCATaGGCTGCTCCAACATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLMGCTAAHVVDITKEVMPAIP*AAPTYC Trigger: ACAATATGTTGGAGCAGCCCATGGTATGGCTGGCAT...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCAGCACATAATCAATGCTaGGTTTCACCATTTCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSFTSWDWGCSLMGCTAAAHNQC*VSPFRL Trigger: TAACCGAAATGGTGAAACCCAGCATTGATTATGTGC...TGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTGTCCTGTCGTCTTCTTCTTTTAGGGTTTACAGTGGGTTCTGTGTCAACTCCTGGAGCACCATaGCACCAGTGGACCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSCRLLLLGFTVGSVSTPGAP*HQWTNR Trigger: TCGATTGGTCCACTGGTGCCATGGTGCTCCAGGAGT...TGACACAGAACCCACTGTAAACCCTAAAAGAAGAAGACGACAGGACAGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | TCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATTCACTTTTGAGTTTATaGTATATCACAGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SWDWGCSLMGCTAAHVVDSLLSL*YITAPT Trigger: TGTGGGAGCTGTGATATATCATAAACTCAAAAGTGA...ATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTCTTCTTCTTCATCAGGAAGCTCTaGCTCTTGACAGACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFATKGACEGFCPVVFFFIRKL*LLTDNS Trigger: ACTATTGTCTGTCAAGAGTCAGAGCTTCCTGATGAA...GAAGAAGACGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTCTTCTTCAGTCCTTCCTCCATCTaGTGCAGAAGATCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVFATKGACEGFCPVVFFSPSSI*CRRSLI Trigger: AATCAAAGATCTTCTGCAGCAGATGGAGGAAGGACT...GAAGAAGACGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TCTAATTGGGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGAAATGCTGGAAACCGTaGTGTCTCTGGTACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNWGSLQQRGLVKVSVLSKCWKP*CLWYQD Trigger: ATCTTGGTACCAGAGACAGCACGGTTTCCAGCATTT...CGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCCCAATTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTGATACCTAGTGGTAAGCAGGAAGGTGTCAATCCACCTGTCTTAAAAGGCGGCTTCATAGTCTaGGAAGGGATTGGGGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: HVLIPSGKQEGVNPPVLKGGFIV*EGIGER Trigger: TCGTTCCCCAATCCCTTCCCAGACTATGAAGCCGCC...TTTTAAGACAGGTGGATTGACACCTTCCTGCTTACCACTAGGTATCAACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTATGCCAGCCATACCATaGGCTGCTCCAACATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSGTNQSGGFWSNGYVMPAIP*AAPTYC Trigger: ACAATATGTTGGAGCAGCCCATGGTATGGCTGGCAT...AACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACACAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATCATCGCTACACTCCATaGCCTCTTTCAAGTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGLGLQPHGMHSSTCSGYHRYTP*PLSSIF Trigger: AAAAATACTTGAAAGAGGCCATGGAGTGTAGCGATG...ATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCGCCAAGTTCAAATGCTaGAAACCGTGCTGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AINYIDHKTHRGRRCQLCAKFKC*KPCCLW Trigger: CCAGAGACAGCACGGTTTCCAGCATTTGAACTTGGC...GCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | CCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCCTCCTAGGTGGAACTTaGGTCTCTTTGACATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLITLTTRHTEGGGVNCALLGGT*VSLTWS Trigger: AGACCATGTCAAAGAGACTCAAGTTCCACCTAGGAG...GGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | GGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTGCTGCAGAAGATCTTTaGTTTTGGTCTGGATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCTAAHVVDITKEVNGVTAAEDL*FWSGYA Trigger: AGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGC...AGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | TCTAATTGGGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGTTCATCAGGAAGCTCTaGCTCTTGACAGACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNWGSLQQRGLVKVSVLSFIRKL*LLTDNS Trigger: ACTATTGTCTGTCAAGAGTCAGAGCTTCCTGATGAA...CGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCCCAATTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | AATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCTTCCTATGTCAGAAAGGAAGTaGACAGCACCAGCCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: NYIDHKTHRGRRCQLCLPMSERK*TAPAIP Trigger: AGGTATGGCTGGTGCTGTTCACTTCCTTTCTGACAT...AGGAAGGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | AGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATATGTCAGAAAGGAAGTaGACAGCACCAGCCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLMGCTAAHVVDITKEVNMSERK*TAPAIP Trigger: AGGTATGGCTGGTGCTGTTCACTTCCTTTCTGACAT...ATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGAAAATGCTACAGACAATAGTTCTATaGATCTGTAGAAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFIRVWEAASHACPWKMLQTIVL*ICRSFV Trigger: CACAAAACTTCTACAGATGCATAGAACTATTGTCTG...TAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTGGCGCACATAATCAATaGTGGGTTTCACCATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGTNQSGGFWSNGYVSCGAHNQ*WVSPFR Trigger: CCGAAATGGTGAAACCCAGCATTGATTATGTGCGCC...ACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTAAATGCTGGAAACCGTaGTGTCTCTGGTACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCTAAHVVDITKEVNGVTKCWKP*CLWYQD Trigger: ATCTTGGTACCAGAGACAGCACGGTTTCCAGCATTT...AGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | GCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCGGAAGCTCTGACTCTTaGCAGACAATAGTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: AINYIDHKTHRGRRCQLCGSSDS*QTIVLC Trigger: GCATAGAACTATTGTCTGTCAAGAGTCAGAGCTTCC...GCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | GTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTGGAAGCTCTGACTCTTaGCAGACAATAGTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGTNQSGGFWSNGYVSCGSSDS*QTIVLC Trigger: GCATAGAACTATTGTCTGTCAAGAGTCAGAGCTTCC...ACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTACAGACAATAGTTCTATaGATCTGTAGAAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSWDWGCSLMGCTAAHVQTIVL*ICRSFV Trigger: CACAAAACTTCTACAGATGCATAGAACTATTGTCTG...TACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | AATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCTTCCTAAAGCCAAGTTCAAATaGTGGAAACCGTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NYIDHKTHRGRRCQLCLPKAKFK*WKPCCL Trigger: GAGACAGCACGGTTTCCAGCATTTGAACTTGGCTTT...AGGAAGGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCTTTGTGATGCATTCCTaGGACTCACATTCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLMGCTAAHVVDITKEVFVMHS*DSHSLL Trigger: CAAAAGTGAATGTGAGTCCCAGGAATGCATCACAAA...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTCTCGGTTAAGGTTTCTTaGTCCACTTTTGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQALINQVAFGPTGMLVVSVKVS*STFASG Trigger: GCCAGAAGCAAAAGTGGACCAAGAAACCTTAACCGA...GACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATTCGGTTAAGGTTTCTTaGTCCACTTTTGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLMGCTAAHVVDITKEVNSVKVS*STFASG Trigger: GCCAGAAGCAAAAGTGGACCAAGAAACCTTAACCGA...ATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATTTCATCAGGAAGCTCTaGCTCTTGACAGACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLMGCTAAHVVDITKEVNFIRKL*LLTDNS Trigger: ACTATTGTCTGTCAAGAGTCAGAGCTTCCTGATGAA...ATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTAGTCCTTCCTCCATCTaGTGCAGAAGATCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSGTNQSGGFWSNGYVSCSPSSI*CRRSLI Trigger: AATCAAAGATCTTCTGCAGCAGATGGAGGAAGGACT...ACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAACAGACAATAGTTCTATaGATCTGTAGAAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLQPHGMHSSTCSGYNEQTIVL*ICRSFV Trigger: CACAAAACTTCTACAGATGCATAGAACTATTGTCTG...TTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCCATTAATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGGCTGCAGAAGATCTTTaGTTTTGGTCTGGATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAINYIDHKTHRGRRCQLAAEDL*FWSGYA Trigger: AGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGC...CAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATTAATGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTTCACTTTTGAGTTTATaGTATATCACAGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSGTNQSGGFWSNGYVSLLSL*YITAPT Trigger: TGTGGGAGCTGTGATATATCATAAACTCAAAAGTGA...AACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACACAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGTTGATACCTAGTGGTAAGCAGGAAGGTGTCAATCCACCTGTCTTAAAATCTGTAGAAGTTTTGTaGTGCATTCCTGGGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVLIPSGKQEGVNPPVLKSVEVL*CIPGTH Trigger: GTGAGTCCCAGGAATGCATCACAAAACTTCTACAGA...TTTTAAGACAGGTGGATTGACACCTTCCTGCTTACCACTAGGTATCAACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTGTGCCTGTCACCTTTAACACTCACATGTGCTCAGCTAAGAGTTCATATGCCAGCCATACCATaGGCTGCTCCAACATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVCLSPLTLTCAQLRVHMPAIP*AAPTYC Trigger: ACAATATGTTGGAGCAGCCCATGGTATGGCTGGCAT...ATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTGAAGCACATAATCAATGCTaGGTTTCACCATTTCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTAAHVVDITKEVNGVTEAHNQC*VSPFRL Trigger: TAACCGAAATGGTGAAACCCAGCATTGATTATGTGC...TTCAGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CCA 90 bp | AATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCTTCCTCATCGCTACACTCCATaGCCTCTTTCAAGTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NYIDHKTHRGRRCQLCLPHRYTP*PLSSIF Trigger: AAAAATACTTGAAAGAGGCCATGGAGTGTAGCGATG...AGGAAGGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | TACCCTAGTTTAGATACTATATACAAAAATGTGTGCCTGTCACCTTTAACACTCTATGCAGAGCAGTCATaGGGGTCCGCTGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YPSLDTIYKNVCLSPLTLYAEQS*GSAVFS Trigger: ACTGAAGACAGCGGACCCTCATGACTGCTCTGCATA...GAGTGTTAAAGGTGACAGGCACACATTTTTGTATATAGTATCTAAACTAGGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAGGTGTCAATCCACCTGTCTTAAAAGGAAATCTTTAAGGGACACGCTGTCACTTTTGAGTTTATaGTATATCACAGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGRCQSTCLKRKSLRDTLSLLSL*YITAPT Trigger: TGTGGGAGCTGTGATATATCATAAACTCAAAAGTGA...CAGCGTGTCCCTTAAAGATTTCCTTTTAAGACAGGTGGATTGACACCTTCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATGTGTGCCTGTCACCTTTAACACTCACATGTGCTCAGCTAAGAGTTCATGGTACAAAAGTGCTATaGCTGTCCAACCAGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: KNVCLSPLTLTCAQLRVHGTKVL*LSNQYM Trigger: CATATACTGGTTGGACAGGCATAGCACTTTTGTACC...ATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTGTGCCTGTCACCTTTAACACTCACATGTGCTCAGCTAAGAGTTCATTTTGTGATGCATTCCTaGGACTCACATTCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNVCLSPLTLTCAQLRVHFVMHS*DSHSLL Trigger: CAAAAGTGAATGTGAGTCCCAGGAATGCATCACAAA...ATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CCA 90 bp | ATACCTAGTGGTAAGCAGGAAGGTGTCAATCCACCTGTCTTAAAAGGAAATCTTCATCGCTACACTCCATaGCCTCTTTCAAGTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGKQEGVNPPVLKGNLHRYTP*PLSSIF Trigger: AAAAATACTTGAAAGAGGCCATGGAGTGTAGCGATG...AAGATTTCCTTTTAAGACAGGTGGATTGACACCTTCCTGCTTACCACTAGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | CTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGATCTCCTAGGTGGAACTaGAGTCTCTTTGACATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTCPSFGFGRLPLTHAHGSPRWN*SLFDMV Trigger: GACCATGTCAAAGAGACTCAAGTTCCACCTAGGAGA...TCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CAA 90 bp | GTGCACACTGACCTGCCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCTGCTGCAGAAGATCTTaGATTTTGGTCTGGATACGC | + |
|
Preference number: 5 (lower is better) Translates to: VHTDLPFIRVWEAASHACCCRRS*ILVWIR Trigger: GCGTATCCAGACCAAAATCAAAGATCTTCTGCAGCA...GCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGGCAGGTCAGTGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS TCA 90 bp | TCTTCACGTAATCCAGGGATCGAAGCAGGTAGGTCTGGTCACCAGTaGCCCGGTACAGCTGCAGGTACAAAAGTGCTATGCCTGTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSRNPGIEAGRSGHQ*PGTAAGTKVLCLSN Trigger: GTTGGACAGGCATAGCACTTTTGTACCTGCAGCTGTACCGGGTCACTGGTGACCAGACCTACCTGCTTCGATCCCTGGATTACGTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCATCTCCTAGGTGGAACTaGAGTCTCTTTGACATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSFTSWDWGCSLMGCTAASPRWN*SLFDMV Trigger: GACCATGTCAAAGAGACTCAAGTTCCACCTAGGAGA...TGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072954.8 |
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| CDS-3UTR CAA 90 bp | CCCTTCATTCGGGTTTGGGAGGCTGCCTCTCACGCATGCCCATGGAAAATGCTAGGCTGCTCCAACATATaGTTTTCTGTGCCACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PFIRVWEAASHACPWKMLGCSNI*FSVPLI Trigger: TATCAGTGGCACAGAAAACAATATGTTGGAGCAGCC...TAGCATTTTCCATGGGCATGCGTGAGAGGCAGCCTCCCAAACCCGAATGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CAA 90 bp | TCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATTTTCTTGGTCCACTTTaGCTTCTGGCTGCATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SWDWGCSLMGCTAAHVVDFLGPL*LLAALA Trigger: TGCTAATGCAGCCAGAAGCAAAAGTGGACCAAGAAA...ATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS TCA 90 bp | TACAAAAGTGCTATGCCTGTCCAACCAGTATATGCAGAGCAGTCATaGGGGTCCGCTGTCTTCAGTCCTTCCTCCATCTGCTGCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YKSAMPVQPVYAEQS*GSAVFSPSSICCRR Trigger: TCTTCTGCAGCAGATGGAGGAAGGACTGAAGACAGCGGACCCTCATGACTGCTCTGCATATACTGGTTGGACAGGCATAGCACTTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | CTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGAATACGCTTTATGAAGTaGGGAACAATCTTCCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LMGLGLQPHGMHSSTCSGIRFMK*GTIFPL Trigger: TAACGGGAAGATTGTTCCCAACTTCATAAAGCGTAT...TCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | TTTACCTCATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGGCTGCTCCAACATATaGTTTTCTGTGCCACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FTSWDWGCSLMGCTAAHVGCSNI*FSVPLI Trigger: TATCAGTGGCACAGAAAACAATATGTTGGAGCAGCC...TACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCATGAGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATATTTCTTGGTCCACTTTaGCTTCTGGCTGCATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WDWGCSLMGCTAAHVVDIFLGPL*LLAALA Trigger: TGCTAATGCAGCCAGAAGCAAAAGTGGACCAAGAAA...TATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS GCA 90 bp | TCTTATCCTGCGTCAGGCGATAAAGGGACAAAAAGGAATAGCCATTaGCAGAGGTTCCATGGCAGATTCCATAACCTTTCCGGAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SYPASGDKGTKRNSH*QRFHGRFHNLSGAD Trigger: GTCTGCTCCGGAAAGGTTATGGAATCTGCCATGGAACCTCTGGCAATGGCTATTCCTTTTTGTCCCTTTATCGCCTGACGCAGGATAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS CCA 90 bp | ACCTGGTATGCCTGTAAGAGCACGTGGATGACTCCTGGAGCACCATaGCACCAGTGGACCAATCGATCTGTTTCATTGCTTAATGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWYACKSTWMTPGAP*HQWTNRSVSLLNDD Trigger: ATCATCATTAAGCAATGAAACAGATCGATTGGTCCACTGGTGCCATGGTGCTCCAGGAGTCATCCACGTGCTCTTACAGGCATACCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | TGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAATTTCCTTTCTTCCCTaGATAGACTCTTTCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: WDWGCSLMGCTAAHVVDIISFLP*IDSFPT Trigger: AGTCGGGAAAGAGTCTATCAAGGGAAGAAAGGAAAT...TATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | ATGGGATTGGGGCTGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATATTTCCTTTCTTCCCTaGATAGACTCTTTCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: MGLGLQPHGMHSSTCSGYISFLP*IDSFPT Trigger: AGTCGGGAAAGAGTCTATCAAGGGAAGAAAGGAAAT...ATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCAGCCCCAATCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS CCA 90 bp | CTTCTGCAAAAAGCCAAGTTCAAATGCTGGAAACCGTGCTGTCTCTaGTACCAAGATGTCAGAAAGGAAGTGAACAGCACCAGCCATACC | + |
|
Preference number: 5 (lower is better) Translates to: LLQKAKFKCWKPCCL*YQDVRKEVNSTSHT Trigger: GGTATGGCTGGTGCTGTTCACTTCCTTTCTGACATCTTGGTACCAGAGACAGCACGGTTTCCAGCATTTGAACTTGGCTTTTTGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCTGCTGCAGAAGATCTTaGATTTTGGTCTGGATACGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLMGCTAAHVVDITKEVCCRRS*ILVWIR Trigger: GCGTATCCAGACCAAAATCAAAGATCTTCTGCAGCA...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | TCTAATTGGGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGATACGCTTTATGAAGTaGGGAACAATCTTCCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNWGSLQQRGLVKVSVLSIRFMK*GTIFPL Trigger: TAACGGGAAGATTGTTCCCAACTTCATAAAGCGTAT...CGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCCCAATTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | GTGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTGGCTGCTCCAACATATaGTTTTCTGTGCCACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VSGTNQSGGFWSNGYVSCGCSNI*FSVPLI Trigger: TATCAGTGGCACAGAAAACAATATGTTGGAGCAGCC...ACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | AATTACATTGACCACAAGACACACAGAGGGAGGAGGTGTCAATTGTGCCTTCCTTTTCTTGGTCCACTTTaGCTTCTGGCTGCATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NYIDHKTHRGRRCQLCLPFLGPL*LLAALA Trigger: TGCTAATGCAGCCAGAAGCAAAAGTGGACCAAGAAA...AGGAAGGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCAATGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS-3UTR CAA 90 bp | GGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAATGGCGTCACTATACGCTTTATGAAGTaGGGAACAATCTTCCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GCTAAHVVDITKEVNGVTIRFMK*GTIFPL Trigger: TAACGGGAAGATTGTTCCCAACTTCATAAAGCGTAT...AGTGACGCCATTGACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCCTCATGGGATGCACAGCAGCACATGTAGTGGATATAACGAAGGAAGTCAGAAGATCTTTGATTTaGGTCTGGATACGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CSLMGCTAAHVVDITKEVRRSLI*VWIRFM Trigger: CATAAAGCGTATCCAGACCAAAATCAAAGATCTTCT...GACTTCCTTCGTTATATCCACTACATGTGCTGCTGTGCATCCCATGAGGCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | TCTAATTGGGGGTCTTTGCAACAAAGGGGGCTTGTGAAGGTTTCTGTCCTGTCGAGAAGATCTTTGATTTaGGTCTGGATACGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SNWGSLQQRGLVKVSVLSRRSLI*VWIRFM Trigger: CATAAAGCGTATCCAGACCAAAATCAAAGATCTTCT...CGACAGGACAGAAACCTTCACAAGCCCCCTTTGTTGCAAAGACCCCCAATTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAGGCACTAATCAATCAGGTGGCTTTTGGTCCAACGGGTATGTTAGTTGTCAGAAGATCTTTGATTTaGGTCTGGATACGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CQALINQVAFGPTGMLVVRRSLI*VWIRFM Trigger: CATAAAGCGTATCCAGACCAAAATCAAAGATCTTCT...GACAACTAACATACCCGTTGGACCAAAAGCCACCTGATTGATTAGTGCCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050077.15 ENSMUST00000153777.2 |
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| CDS-3UTR CAA 90 bp | AAAAATGTGTGCCTGTCACCTTTAACACTCACATGTGCTCAGCTAAGAGTTCATATTTCCTTTCTTCCCTaGATAGACTCTTTCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: KNVCLSPLTLTCAQLRVHISFLP*IDSFPT Trigger: AGTCGGGAAAGAGTCTATCAAGGGAAGAAAGGAAAT...ATGAACTCTTAGCTGAGCACATGTGAGTGTTAAAGGTGACAGGCACACATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050077.15 |
||
| CDS TCA 72 bp | GCTATGCCTGTCCAACCAGTATATGCAGAGCAGTCATaGGGGTCCGCTGTCTTCAGTCCTTCCTCCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AMPVQPVYAEQS*GSAVFSPSSIC Trigger: GCAGATGGAGGAAGGACTGAAGACAGCGGACCCTCATGACTGCTCTGCATATACTGGTTGGACAGGCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS TCA 72 bp | AATCCAGGGATCGAAGCAGGTAGGTCTGGTCACCAGTaGCCCGGTACAGCTGCAGGTACAAAAGTGCTATGC | + |
|
Preference number: 6 (lower is better) Translates to: NPGIEAGRSGHQ*PGTAAGTKVLC Trigger: GCATAGCACTTTTGTACCTGCAGCTGTACCGGGTCACTGGTGACCAGACCTACCTGCTTCGATCCCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS TCA 72 bp | CCACAGCAAGGGGCCCAGCATCTCCACAAAGGAAAGTaGCTCTGCGACCACTCAAATTTCGGAGTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQQGAQHLHKGK*LCDHSNFGVFS Trigger: AGAGAACACTCCGAAATTTGAGTGGTCGCAGAGTCACTTTCCTTTGTGGAGATGCTGGGCCCCTTGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS GCA 72 bp | CAGGTACAAAAGTGCTATGCCTGTCCAACCAGTATATaGAGAGCAGTCATGAGGGTCCGCTGTCTTCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QVQKCYACPTSI*RAVMRVRCLQS Trigger: GGACTGAAGACAGCGGACCCTCATGACTGCTCTGCATATACTGGTTGGACAGGCATAGCACTTTTGTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS CAA 90 bp | TGCTGCAGAAGATCTTTGATTTTGGTCTGGATACGCTTTATGAAGTaGGGAACAATCTTCCCGTTAGGGTGGAAAGGGAGGCCCGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CCRRSLILVWIRFMK*GTIFPLGWKGRPGS Trigger: AGACCCGGGCCTCCCTTTCCACCCTAACGGGAAGATTGTTCCCAACTTCATAAAGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS GCA 72 bp | GCGTCAGGCGATAAAGGGACAAAAAGGAATAGCCATTaGCAGAGGTTCCATGGCAGATTCCATAACCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGDKGTKRNSH*QRFHGRFHNLS Trigger: GGAAAGGTTATGGAATCTGCCATGGAACCTCTGGCAATGGCTATTCCTTTTTGTCCCTTTATCGCCTGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS TCA 72 bp | ATGCATTCCTGGGACTCACATTCACTTTTGAGTTTATaGTATATCACAGCTCCCACAGCAAGGGGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MHSWDSHSLLSL*YITAPTARGPA Trigger: TGCTGGGCCCCTTGCTGTGGGAGCTGTGATATATCATAAACTCAAAAGTGAATGTGAGTCCCAGGAATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS GCA 72 bp | CCACTTTTGCTTCTGGCTGCATTAGCATGTAGTAGATaGCAGCCATACCATGGGCTGCTCCAACATATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLLLAALACSR*QPYHGLLQHIV Trigger: AACAATATGTTGGAGCAGCCCATGGTATGGCTGGCATCTACTACATGCTAATGCAGCCAGAAGCAAAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS CAA 90 bp | CAATGCTGGGTTTCACCATTTCGGTTAAGGTTTCTTGGTCCACTTTaGCTTCTGGCTGCATTAGCATGTAGTAGATGCCAGCCATACCAT | + |
|
Preference number: 6 (lower is better) Translates to: QCWVSPFRLRFLGPL*LLAALACSRCQPYH Trigger: ATGGTATGGCTGGCATCTACTACATGCTAATGCAGCCAGAAGCAAAAGTGGACCAAGAAACCTTAACCGAAATGGTGAAACCCAGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
||
| CDS CCA 72 bp | TCCTCCATCTGCTGCAGAAGATCTTTGATTTTGGTCTaGATACGCTTTATGAAGTTGGGAACAATCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSICCRRSLILV*IRFMKLGTIFP Trigger: CGGGAAGATTGTTCCCAACTTCATAAAGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGCAGATGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS CAA 72 bp | AGATCTTTGATTTTGGTCTGGATACGCTTTATGAAGTaGGGAACAATCTTCCCGTTAGGGTGGAAAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSLILVWIRFMK*GTIFPLGWKGR Trigger: CCTCCCTTTCCACCCTAACGGGAAGATTGTTCCCAACTTCATAAAGCGTATCCAGACCAAAATCAAAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS CAA 72 bp | GTTTCACCATTTCGGTTAAGGTTTCTTGGTCCACTTTaGCTTCTGGCTGCATTAGCATGTAGTAGATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VSPFRLRFLGPL*LLAALACSRCQ Trigger: CTGGCATCTACTACATGCTAATGCAGCCAGAAGCAAAAGTGGACCAAGAAACCTTAACCGAAATGGTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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| CDS CAA 72 bp | AGTCCTTCCTCCATCTGCTGCAGAAGATCTTTGATTTaGGTCTGGATACGCTTTATGAAGTTGGGAACAATC | + |
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Preference number: 6 (lower is better) Translates to: SPSSICCRRSLI*VWIRFMKLGTI Trigger: GATTGTTCCCAACTTCATAAAGCGTATCCAGACCAAAATCAAAGATCTTCTGCAGCAGATGGAGGAAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050077.15 ENSMUST00000072954.8 ENSMUST00000153777.2 |
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