Pregenerated sensors for LANCL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026000

Ensembl transcript IDs: ENSMUST00000027149.12, ENSMUST00000113979.10, ENSMUST00000119559.8, ENSMUST00000149996.2

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GGAAGGCAGTACCCAGCAACAGCCATCACATGTAATGTGTCCACCTaGACTGAGCTCGTGTGTGCACTGTGTGCACTGTGTGTATCTGTG	+
Preference number: 1 (lower is better) Translates to: GRQYPATAITCNVST*TELVCALCALCVSV Trigger: CACAGATACACACAGTGCACACAGTGCACACACGAGCTCAGTGCAGGTGGACACATTACATGTGATGGCTGTTGCTGGGTACTGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 90 bp	TGCTCACCACTTGAGAGAACCCAGTCCCAGAACTACTACTCTCTGTaGAGGCAGAATGCTCAACAGAAGAGCTGGAAGGCAGTACCCAGC	+
Preference number: 1 (lower is better) Translates to: CSPLERTQSQNYYSL*RQNAQQKSWKAVPS Trigger: GCTGGGTACTGCCTTCCAGCTCTTCTGTTGAGCATTCTGCCTCCACAGAGAGTAGTAGTTCTGGGACTGGGTTCTCTCAAGTGGTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 90 bp	CCTGAATGGAAATGGTTCTTGCAGCCTCTACCCGAGGAGGGGCGTTaGTGTCAGCCTTTACTCTATGTGAGTTTAAGATCCTTAGAAAAC	+
Preference number: 1 (lower is better) Translates to: PEWKWFLQPLPEEGR*CQPLLYVSLRSLEN Trigger: GTTTTCTAAGGATCTTAAACTCACATAGAGTAAAGGCTGACACCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTCCATTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 90 bp	CACTGTCAGTGTAGTGAGTTTCTAAAATGCTACAGTGAAGAGAGCTaGATGGTGTTCATGAGTCTGTTCATGGGTGACAATATGCAGGAG	+
Preference number: 1 (lower is better) Translates to: HCQCSEFLKCYSEES*MVFMSLFMGDNMQE Trigger: CTCCTGCATATTGTCACCCATGAACAGACTCATGAACACCATTCAGCTCTCTTCACTGTAGCATTTTAGAAACTCACTACACTGACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 90 bp	AGCCAAACAGCTGCACTTTACTGTCTAAGAGTGACTTATAAATATTaGTACAAAGCCTTCACCTGGCACAGTCTACACACAACTTCTGAG	+
Preference number: 1 (lower is better) Translates to: SQTAALYCLRVTYKY*YKAFTWHSLHTTSE Trigger: CTCAGAAGTTGTGTGTAGACTGTGCCAGGTGAAGGCTTTGTATCAATATTTATAAGTCACTCTTAGACAGTAAAGTGCAGCTGTTTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	TGTGTGCACTGTGTGCACTGTGTGTATCTGTGTTGGGGCAGGGCCCAGGGCTCTAAGAGGAACATTTCCTaGATGTCTGGGAACCATGCG	+
Preference number: 2 (lower is better) Translates to: CVHCVHCVYLCWGRAQGSKRNIS*MSGNHA Trigger: CGCATGGTTCCCAGACATGCAGGAAATGTTCCTCTT...AGAGCCCTGGGCCCTGCCCCAACACAGATACACACAGTGCACACAGTGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGTGTAATGTGTCCACCTaGACTGAGCTCGTGTGTGCA	+
Preference number: 2 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWCNVST*TELVCA Trigger: TGCACACACGAGCTCAGTGCAGGTGGACACATTACA...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTGCTCAACAGAAGAGCTaGAAGGCAGTACCCAGCAAC	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATAQQKS*KAVPSN Trigger: GTTGCTGGGTACTGCCTTCCAGCTCTTCTGTTGAGC...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTTTGGCCTTGAACTTGTaGTCCTCCTGCCTCTCTCCC	+
Preference number: 2 (lower is better) Translates to: DVNSFLWPSSMEPPETWSLALNL*SSCLSP Trigger: GGGAGAGAGGCAGGAGGATCACAAGTTCAAGGCCAA...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTAAAGCAAGGCAAAGCTaGGCCAAACGTCTCAAGGTC	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATKARQS*AKRLKV Trigger: GACCTTGAGACGTTTGGCTCAGCTTTGCCTTGCTTT...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAGGTGGTCTCGGAATGTaGAGGACACTTGCTCTTGGG	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRGGLGM*RTLALG Trigger: CCCAAGAGCAAGTGTCCTTCACATTCCGAGACCACC...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTTCTACACACAACTTCTaGGGATGCACAGGGGTCACA	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATSTHNF*GCTGVT Trigger: TGTGACCCCTGTGCATCCTCAGAAGTTGTGTGTAGA...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 90 bp	AATAAAACCAACCATGTCTGCACGACACCTGAATGGAAATGGTTCTaGCAGCCTCTACCCGAGGAGGGGCGTTGGTGTCAGCCTTTACTC	+
Preference number: 2 (lower is better) Translates to: NKTNHVCTTPEWKWF*QPLPEEGRWCQPLL Trigger: GAGTAAAGGCTGACACCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCAGACATGGTTGGTTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGACCTTTGCTCACCACTTaGGAGAACCCAGTCCCAGAA	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRPLLTT*ENPVPE Trigger: TTCTGGGACTGGGTTCTCTCAAGTGGTGAGCAAAGG...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTGTCTGGTTAGGCCTTTaGTATCGAGGAAAGAAGGGA	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATVWLGL*YRGKKG Trigger: TCCCTTCTTTCCTCGATATCAAAGGCCTAACCAGAC...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGACAGCCAAAGGTCAGGTaGGACCCTGTCTCAGCAAAT	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRQPKVR*DPVSAN Trigger: ATTTGCTGAGACAGGGTCCCACCTGACCTTTGGCTG...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTACACCTGAATGGAAATaGTTCTTGCAGCCTCTACCC	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATTPEWK*FLQPLP Trigger: GGGTAGAGGCTGCAAGAACCATTTCCATTCAGGTGT...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	ACATATGAAACCAGCCTTTCCCAGTTTAGTGGCAATGAACCTTGGGGTGATTGCTATGGCCCAGCAGTATaGAGCCCCCAGAAACCTGGT	+
Preference number: 2 (lower is better) Translates to: TYETSLSQFSGNEPWGDCYGPAV*SPQKPG Trigger: ACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATA...GCAATCACCCCAAGGTTCATTGCCACTAAACTGGGAAAGGCTGGTTTCATATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 90 bp	TGTTCTACCACTCAGCTACGTGCCAGATCTCTCCTGCTCTTTACCTaGAAAACGGGTCTCACTAAGTTGCCTAGGTTGGCCTTGAACTTG	+
Preference number: 2 (lower is better) Translates to: CSTTQLRARSLLLFT*KTGLTKLPRLALNL Trigger: CAAGTTCAAGGCCAACCTAGGCAACTTAGTGAGACCCGTTTTCAAGGTAAAGAGCAGGAGAGATCTGGCACGTAGCTGAGTGGTAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGCTTCTAGATCTCATCTaGGTACTAAAGGACAGACAA	+
Preference number: 2 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWLLDLI*VLKDRQ Trigger: TTGTCTGTCCTTTAGTACTCAGATGAGATCTAGAAG...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAGCTGAATGGTGTTCATaGGTCTGTTCATGGGTGACA	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRAEWCS*VCSWVT Trigger: TGTCACCCATGAACAGACTCATGAACACCATTCAGC...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTAATGTGAAGGACACTTaGTCTTGGGATATGCAAACC	+
Preference number: 2 (lower is better) Translates to: QAQNPLLPSLWMEMNNATNVKDT*SWDMQT Trigger: GGTTTGCATATCCCAAGAGCAAGTGTCCTTCACATT...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCCAACACTCATCAGGATaGCTGGGGAAGCACTGTGAC	+
Preference number: 2 (lower is better) Translates to: TRFKFRAEKHKGINRLPGQHSSG*LGKHCD Trigger: GTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTG...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAGCTCAACAGAAGAGCTaGAAGGCAGTACCCAGCAAC	+
Preference number: 2 (lower is better) Translates to: FLEATGQSSSLSTLFVSRAQQKS*KAVPSN Trigger: GTTGCTGGGTACTGCCTTCCAGCTCTTCTGTTGAGC...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGATGCACGACACCTGAATaGAAATGGTTCTTGCAGCCT	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRCTTPE*KWFLQP Trigger: AGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCA...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGACTACACCTGAGTTCTTaGAGCCTAAGGAGGAGAGAA	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRLHLSS*SLRRRE Trigger: TTCTCTCCTCCTTAGGCTCCAAGAACTCAGGTGTAG...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGAATGTTCAAGTCAATTaGCAGAAGGTGATGACATGT	+
Preference number: 2 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWNVQVN*QKVMTC Trigger: ACATGTCATCACCTTCTGTCAATTGACTTGAACATT...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCTCTACACACAACTTCTaGGGATGCACAGGGGTCACA	+
Preference number: 2 (lower is better) Translates to: TRFKFRAEKHKGINRLPGSTHNF*GCTGVT Trigger: TGTGACCCCTGTGCATCCTCAGAAGTTGTGTGTAGA...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGATACAGTGAAGAGAGCTaGATGGTGTTCATGAGTCTG	+
Preference number: 2 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRYSEES*MVFMSL Trigger: CAGACTCATGAACACCATTCAGCTCTCTTCACTGTA...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTACATGCTCCCAGGCATaGATCACATTGATGGATAAG	+
Preference number: 2 (lower is better) Translates to: DVNSFLWPSSMEPPETWSTCSQA*ITLMDK Trigger: CTTATCCATCAATGTGATCCATGCCTGGGAGCATGT...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 90 bp	GAACTGGAATTAATGTCAAGTAAGCCGGGGACTACACCTGAGTTCTaGGAGCCTAAGGAGGAGAGAAGTGAAAGATCCCACTTACACTAC	+
Preference number: 2 (lower is better) Translates to: ELELMSSKPGTTPEF*EPKEERSERSHLHY Trigger: GTAGTGTAAGTGGGATCTTTCACTTCTCTCCTCCTTAGGCTCCAAGAACTCAGGTGTAGTCCCCGGCTTACTTGACATTAATTCCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAAAGAGGAACATTTCCTaGATGTCTGGGAACCATGCG	+
Preference number: 2 (lower is better) Translates to: FLEATGQSSSLSTLFVSRKRNIS*MSGNHA Trigger: CGCATGGTTCCCAGACATGCAGGAAATGTTCCTCTT...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	TGTTACACGCATGAAGGCAGTCACATCCCATTCCAGCCAAGAGCCGTGTTTTCTTACACAGTTTCATTCTaGTTCCTTCAAAAGCAAGGG	+
Preference number: 2 (lower is better) Translates to: CYTHEGSHIPFQPRAVFSYTVSF*FLQKQG Trigger: CCCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTA...AGAAAACACGGCTCTTGGCTGGAATGGGATGTGACTGCCTTCATGCGTGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTACATGCTCCCAGGCATaGATCACATTGATGGATAAG	+
Preference number: 2 (lower is better) Translates to: LDRACVAHEVGFLVQTETTCSQA*ITLMDK Trigger: CTTATCCATCAATGTGATCCATGCCTGGGAGCATGT...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	ACATATGAAACCAGCCTTTCCCAGTTTAGTGGCAATGAACCTTGGGGTGATTGCAACTACTACTCTCTGTaGAGGCAGAATGCTCAACAG	+
Preference number: 2 (lower is better) Translates to: TYETSLSQFSGNEPWGDCNYYSL*RQNAQQ Trigger: CTGTTGAGCATTCTGCCTCCACAGAGAGTAGTAGTT...GCAATCACCCCAAGGTTCATTGCCACTAAACTGGGAAAGGCTGGTTTCATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTGTGACTTATAAATATTaGTACAAAGCCTTCACCTGG	+
Preference number: 2 (lower is better) Translates to: DVNSFLWPSSMEPPETWSVTYKY*YKAFTW Trigger: CCAGGTGAAGGCTTTGTATCAATATTTATAAGTCAC...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCTTCCAAAGCAGCCACTaGAAGGTTTTGAAACTAGGA	+
Preference number: 2 (lower is better) Translates to: TRFKFRAEKHKGINRLPGFQSSH*KVLKLG Trigger: TCCTAGTTTCAAAACCTTCCAGTGGCTGCTTTGGAA...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGACTTCTAGATCTCATCTaGGTACTAAAGGACAGACAA	+
Preference number: 2 (lower is better) Translates to: FLEATGQSSSLSTLFVSRLLDLI*VLKDRQ Trigger: TTGTCTGTCCTTTAGTACTCAGATGAGATCTAGAAG...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR TCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCTCTAAAATGCTACAGTaGAGAGAGCTGAATGGTGTT	+
Preference number: 2 (lower is better) Translates to: TRFKFRAEKHKGINRLPGSKMLQ*RELNGV Trigger: AACACCATTCAGCTCTCTTCACTGTAGCATTTTAGA...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR GCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTTACACAGTTTCATTCTaGTTCCTTCAAAAGCAAGGG	+
Preference number: 2 (lower is better) Translates to: LDRACVAHEVGFLVQTETYTVSF*FLQKQG Trigger: CCCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTA...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	GACCCTGAGGATGGGAGACCGACAGCTGGGATGAAATaGACTCCCTGGTGGGATCTATGGAGACGGCCATGT	+
Preference number: 3 (lower is better) Translates to: DPEDGRPTAGMK*TPWWDLWRRPC Trigger: ACATGGCCGTCTCCATAGATCCCACCAGGGAGTTCATTTCATCCCAGCTGTCGGTCTCCCATCCTCAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	CAGATGACCCTGAGGATGGGAGACCGACAGCTGGGATaGAATGAACTCCCTGGTGGGATCTATGGAGACGGC	+
Preference number: 3 (lower is better) Translates to: QMTLRMGDRQLG*NELPGGIYGDG Trigger: GCCGTCTCCATAGATCCCACCAGGGAGTTCATTTCATCCCAGCTGTCGGTCTCCCATCCTCAGGGTCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CAA 90 bp	TGTTACACGCATGAAGGCAGTCACATCCCATTCCAGCCAAGAGCCGTGTTTTCTCTGTGTGTATCTGTGTaGGGGCAGGGCCCAGGGCTC	+
Preference number: 3 (lower is better) Translates to: CYTHEGSHIPFQPRAVFSLCVSV*GQGPGL Trigger: GAGCCCTGGGCCCTGCCCCAACACAGATACACACAG...AGAAAACACGGCTCTTGGCTGGAATGGGATGTGACTGCCTTCATGCGTGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	AAAACCAACCATGTCTGCACGACACCTGAATGGAAATaGTTCTTGCAGCCTCTACCCGAGGAGGGGCGTTGG	+
Preference number: 3 (lower is better) Translates to: KTNHVCTTPEWK*FLQPLPEEGRW Trigger: CCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCAGACATGGTTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CAA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTCTGTGTGTATCTGTGTaGGGGCAGGGCCCAGGGCTC	+
Preference number: 3 (lower is better) Translates to: LDRACVAHEVGFLVQTETLCVSV*GQGPGL Trigger: GAGCCCTGGGCCCTGCCCCAACACAGATACACACAG...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CAA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAGTGCTGGGCTGCTCTTaGGATCCTACTGTAGGCACC	+
Preference number: 3 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRVLGCS*DPTVGT Trigger: GGTGCCTACAGTAGGATCCAAAGAGCAGCCCAGCAC...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	TCACTCAGGCACAGTCAGCGAAAAGCAAGGCAAAGCTaGGCCAAACGTCTCAAGGTCAGCCAAAGGTCAGGT	+
Preference number: 3 (lower is better) Translates to: SLRHSQRKARQS*AKRLKVSQRSG Trigger: ACCTGACCTTTGGCTGACCTTGAGACGTTTGGCTCAGCTTTGCCTTGCTTTTCGCTGACTGTGCCTGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	GCCTGGCAGGCTCAGAACCCCTTACTGCCCAGTCTCTaGATGGAGATGAACAATGCCACTGAGTTTTCCAAA	+
Preference number: 3 (lower is better) Translates to: AWQAQNPLLPSL*MEMNNATEFSK Trigger: TTTGGAAAACTCAGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTGCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CAA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGACCCTTTGCTCACCACTaGAGAGAACCCAGTCCCAGA	+
Preference number: 3 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRPFAHH*REPSPR Trigger: TCTGGGACTGGGTTCTCTCAAGTGGTGAGCAAAGGG...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	CTCAGCTACGTGCCAGATCTCTCCTGCTCTTTACCTTaGAAACGGGTCTCACTAAGTTGCCTAGGTTGGCCT	+
Preference number: 3 (lower is better) Translates to: LSYVPDLSCSLP*KRVSLSCLGWP Trigger: AGGCCAACCTAGGCAACTTAGTGAGACCCGTTTTCAAGGTAAAGAGCAGGAGAGATCTGGCACGTAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	CTGAGCCAAACGTCTCAAGGTCAGCCAAAGGTCAGGTaGGACCCTGTCTCAGCAAATTCACACAGACAATCT	+
Preference number: 3 (lower is better) Translates to: LSQTSQGQPKVR*DPVSANSHRQS Trigger: AGATTGTCTGTGTGAATTTGCTGAGACAGGGTCCCACCTGACCTTTGGCTGACCTTGAGACGTTTGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	CCGAGGTGGTCTCGGAATGTGAAGGACACTTGCTCTTaGGATATGCAAACCGCCATTTGTTACACGCATGAA	+
Preference number: 3 (lower is better) Translates to: PRWSRNVKDTCS*DMQTAICYTHE Trigger: TTCATGCGTGTAACAAATGGCGGTTTGCATATCCCAAGAGCAAGTGTCCTTCACATTCCGAGACCACCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	AAATGGTTCTTGCAGCCTCTACCCGAGGAGGGGCGTTaGTGTCAGCCTTTACTCTATGTGAGTTTAAGATCC	+
Preference number: 3 (lower is better) Translates to: KWFLQPLPEEGR*CQPLLYVSLRS Trigger: GGATCTTAAACTCACATAGAGTAAAGGCTGACACCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	AAGAATAAAACCAACCATGTCTGCACGACACCTGAATaGAAATGGTTCTTGCAGCCTCTACCCGAGGAGGGG	+
Preference number: 3 (lower is better) Translates to: KNKTNHVCTTPE*KWFLQPLPEEG Trigger: CCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCAGACATGGTTGGTTTTATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR-3UTR CAA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTAGTCTGGTTAGGCCTTaGATATCGAGGAAAGAAGGG	+
Preference number: 3 (lower is better) Translates to: DVNSFLWPSSMEPPETWSSLVRP*ISRKEG Trigger: CCCTTCTTTCCTCGATATCAAAGGCCTAACCAGACT...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	AGAGAGCTGAATGGTGTTCATGAGTCTGTTCATGGGTaGCAATATGCAGGAGGCAACACTCATCAGGATGCC	+
Preference number: 3 (lower is better) Translates to: RELNGVHESVHG*QYAGGNTHQDA Trigger: GGCATCCTGATGAGTGTTGCCTCCTGCATATTGTCACCCATGAACAGACTCATGAACACCATTCAGCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	CCCTGGTGGGATCTATGGAGACGGCCATGTCAATGCTaGCATGTTACACGATTCAAGTTTAGGGCTGAAAAG	+
Preference number: 3 (lower is better) Translates to: PWWDLWRRPCQC*HVTRFKFRAEK Trigger: CTTTTCAGCCCTAAACTTGAATCGTGTAACATGTCAGCATTGACATGGCCGTCTCCATAGATCCCACCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	CATTCCAGCCAAGAGCCGTGTTTTCTTAGAAGCTACTaGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAG	+
Preference number: 3 (lower is better) Translates to: HSSQEPCFLRSY*SEQLPFHTLCK Trigger: CTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAAAACACGGCTCTTGGCTGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	GAGGAACATTTCCTGCATGTCTGGGAACCATGCGAATaGTCAGAAGATACTGTACTGTCATCCATCCTTCCC	+
Preference number: 3 (lower is better) Translates to: EEHFLHVWEPCE*SEDTVLSSILP Trigger: GGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCATGGTTCCCAGACATGCAGGAAATGTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	ACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTaGGTTTTCCAAAGCAGCCACTGGAAGGTTTTGAAA	+
Preference number: 3 (lower is better) Translates to: TAQSLDGDEQCH*VFQSSHWKVLK Trigger: TTTCAAAACCTTCCAGTGGCTGCTTTGGAAAACTCAGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	CAATGTTCAAGTCAATTGACAGAAGGTGATGACATGTaGCACTCACTCAGGCACAGTCAGCGAAAAGCAAGG	+
Preference number: 3 (lower is better) Translates to: QCSSQLTEGDDM*HSLRHSQRKAR Trigger: CCTTGCTTTTCGCTGACTGTGCCTGAGTGAGTGCCACATGTCATCACCTTCTGTCAATTGACTTGAACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR GCA 72 bp	AAAAACTCGACCACTTCAAAGTACACAGTTTCATTCTaGTTCCTTCAAAAGCAAGGGCAATATGTAGCCCAG	+
Preference number: 3 (lower is better) Translates to: KNSTTSKYTVSF*FLQKQGQYVAQ Trigger: CTGGGCTACATATTGCCCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR GCA 72 bp	GAAGGAAAAATGCATAAGAATAAAACCAACCATGTCTaGACGACACCTGAATGGAAATGGTTCTTGCAGCCT	+
Preference number: 3 (lower is better) Translates to: EGKMHKNKTNHV*TTPEWKWFLQP Trigger: AGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCAGACATGGTTGGTTTTATTCTTATGCATTTTTCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	TGTAGTGAGTTTCTAAAATGCTACAGTGAAGAGAGCTaGATGGTGTTCATGAGTCTGTTCATGGGTGACAAT	+
Preference number: 3 (lower is better) Translates to: CSEFLKCYSEES*MVFMSLFMGDN Trigger: ATTGTCACCCATGAACAGACTCATGAACACCATTCAGCTCTCTTCACTGTAGCATTTTAGAAACTCACTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR TCA 72 bp	TACTTCAAGATTAGGCCCAGTAATCTAGATACAAATTaGCCTGAGGACACAGGAATAGAGTGCTGCAATTCT	+
Preference number: 3 (lower is better) Translates to: YFKIRPSNLDTN*PEDTGIECCNS Trigger: AGAATTGCAGCACTCTATTCCTGTGTCCTCAGGTCAATTTGTATCTAGATTACTGGGCCTAATCTTGAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CCA 72 bp	ATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTaGAAGGGAATTAAGATGGCTTCAAGTACACTTATA	+
Preference number: 3 (lower is better) Translates to: IRRYCTVIHPSL*KGIKMASSTLI Trigger: TATAAGTGTACTTGAAGCCATCTTAATTCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	TGTGTGCACTGTGTGCACTGTGTGTATCTGTGTTGGGGCAGGGCCCAGGGCTCTAGCGTAGGCATTCCCTaGAGCACCATGGCACAGCCC	+
Preference number: 4 (lower is better) Translates to: CVHCVHCVYLCWGRAQGSSVGIP*STMAQP Trigger: GGGCTGTGCCATGGTGCTGCAGGGAATGCCTACGCT...AGAGCCCTGGGCCCTGCCCCAACACAGATACACACAGTGCACACAGTGCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 72 bp	CTCGTGTGTGCACTGTGTGCACTGTGTGTATCTGTGTaGGGGCAGGGCCCAGGGCTCTTCTCCATGCTAGGA	+
Preference number: 4 (lower is better) Translates to: LVCALCALCVSV*GQGPGLFSMLG Trigger: TCCTAGCATGGAGAAGAGCCCTGGGCCCTGCCCCAACACAGATACACACAGTGCACACAGTGCACACACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	TGTGTGCACTGTGTGCACTGTGTGTATCTGTGTTGGGGCAGGGCCCAGGGCTCTACTTCAGATCCTGTGTaGGGTTGTAGAGTGCCAGGA	+
Preference number: 4 (lower is better) Translates to: CVHCVHCVYLCWGRAQGSTSDPV*GCRVPG Trigger: TCCTGGCACTCTACAACCTCACACAGGATCTGAAGT...AGAGCCCTGGGCCCTGCCCCAACACAGATACACACAGTGCACACAGTGCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTGGTAAAGCACAGCGATaGCTGCCCAGCCAGTGTACC	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATGKAQR*LPSQCT Trigger: GGTACACTGGCTGGGCAGGCATCGCTGTGCTTTACC...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 72 bp	AACCATGTCTGCACGACACCTGAATGGAAATGGTTCTaGCAGCCTCTACCCGAGGAGGGGCGTTGGTGTCAG	+
Preference number: 4 (lower is better) Translates to: NHVCTTPEWKWF*QPLPEEGRWCQ Trigger: CTGACACCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTCCATTCAGGTGTCGTGCAGACATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGGCCTGCTCAGACAGTTaGGGCTTTGCTTTACATAGC	+
Preference number: 4 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWACSDS*GFALHS Trigger: GCTATGTAAAGCAAAGCCTCAACTGTCTGAGCAGGC...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTCCTCTCTCCATTTGCTaGAGGAGCTCTCGGATCTTA	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATPLSIC*RSSRIL Trigger: TAAGATCCGAGAGCTCCTTCAGCAAATGGAGAGAGG...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTGCCTGCTCAGACAGTTaGGGCTTTGCTTTACATAGC	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATACSDS*GFALHS Trigger: GCTATGTAAAGCAAAGCCTCAACTGTCTGAGCAGGC...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTCGCCACACAGGAAGGTaGTGGAACGCCTGCTCAGAC	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETRHTGR*WNACSD Trigger: GTCTGAGCAGGCGTTCCATCACCTTCCTGTGTGGCG...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGACGCCACACAGGAAGGTaGTGGAACGCCTGCTCAGAC	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRRHTGR*WNACSD Trigger: GTCTGAGCAGGCGTTCCATCACCTTCCTGTGTGGCG...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CGTGCCAGATCTCTCCTGCTCTTTACCTTGAAAACGGGTCTCACTAAGTTGCCTTTTCCTTGGTTCACCTaGAGGCTGGGCTGCATCAGG	+
Preference number: 4 (lower is better) Translates to: RARSLLLFTLKTGLTKLPFPWFT*RLGCIR Trigger: CCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAA...AGGCAACTTAGTGAGACCCGTTTTCAAGGTAAAGAGCAGGAGAGATCTGGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGTGTGAGGTTGTAGAGTaGCAGGAAAGCGTAGGCATT	+
Preference number: 4 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWCEVVE*QESVGI Trigger: AATGCCTACGCTTTCCTGGCACTCTACAACCTCACA...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAACCCCAGGAGCACCGTaGCACCAATGGACAAGCAGG	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRTPGAP*HQWTSR Trigger: CCTGCTTGTCCATTGGTGCCACGGTGCTCCTGGGGT...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGCAAATGCAGGGAACTTaGCCTTTGTGGGGACTAACA	+
Preference number: 4 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWQMQGT*PLWGLT Trigger: TGTTAGTCCCCACAAAGGCCAAGTTCCCTGCATTTG...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCGCCACACAGGAAGGTaGTGGAACGCCTGCTCAGAC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSRHTGR*WNACSD Trigger: GTCTGAGCAGGCGTTCCATCACCTTCCTGTGTGGCG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCAGCGTAGGCATTCCCTaGAGCACCATGGCACAGCCC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSVGIP*STMAQP Trigger: GGGCTGTGCCATGGTGCTGCAGGGAATGCCTACGCT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTACCACTCAGCAAACTTaGAGGCCCTGTACAGATACT	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATTTQQT*RPCTDT Trigger: AGTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGT...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTGGACAAGCAGGTCTCTaGTATCATCCAAACATGGAG	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATGQAGL*YHPNME Trigger: CTCCATGTTTGGATGATACCAGAGACCTGCTTGTCC...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCACCCCAGGAGCACCGTaGCACCAATGGACAAGCAGG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSTPGAP*HQWTSR Trigger: CCTGCTTGTCCATTGGTGCCACGGTGCTCCTGGGGT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR TCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCTTTCCTTGGTTCACCTaGAGGCTGGGCTGCATCAGG	+
Preference number: 4 (lower is better) Translates to: TRFKFRAEKHKGINRLPGFPWFT*RLGCIR Trigger: CCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAA...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGGTAAAGCACAGCGATaGCTGCCCAGCCAGTGTACC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSGKAQR*LPSQCT Trigger: GGTACACTGGCTGGGCAGGCATCGCTGTGCTTTACC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTATGCACTCCTCGGCCTaGTTCTCACTGTTCATCTTG	+
Preference number: 4 (lower is better) Translates to: DVNSFLWPSSMEPPETWSMHSSA*FSLFIL Trigger: CAAGATGAACAGTGAGAAGCAGGCCGAGGAGTGCAT...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTGTAGTAATAAATGCCTaGCAAGCCATGAGCAGCCCC	+
Preference number: 4 (lower is better) Translates to: DVNSFLWPSSMEPPETWSVVINA*QAMSSP Trigger: GGGGCTGCTCATGGCTTGGCAGGCATTTATTACTAC...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 72 bp	GAAATGGTTCTTGCAGCCTCTACCCGAGGAGGGGCGTaGGTGTCAGCCTTTACTCTATGTGAGTTTAAGATC	+
Preference number: 4 (lower is better) Translates to: EMVLAASTRGGA*VSAFTLCEFKI Trigger: GATCTTAAACTCACATAGAGTAAAGGCTGACACCAACGCCCCTCCTCGGGTAGAGGCTGCAAGAACCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTTTCCTTGGTTCACCTaGAGGCTGGGCTGCATCAGG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSFPWFT*RLGCIR Trigger: CCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	ATAAGTAGTAAGAGGAACATTTCCTGCATGTCTGGGAACCATGCGAATGATCAGGGTAAAGCACAGCGATaGCTGCCCAGCCAGTGTACC	+
Preference number: 4 (lower is better) Translates to: ISSKRNISCMSGNHANDQGKAQR*LPSQCT Trigger: GGTACACTGGCTGGGCAGGCATCGCTGTGCTTTACC...CTGATCATTCGCATGGTTCCCAGACATGCAGGAAATGTTCCTCTTACTACTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	AAACTCGACCACTTCAAAGTACACAGTTTCATTCTGCTTCCTTCAAAAGCAAGGAGCGTAGGCATTCCCTaGAGCACCATGGCACAGCCC	+
Preference number: 4 (lower is better) Translates to: KLDHFKVHSFILLPSKARSVGIP*STMAQP Trigger: GGGCTGTGCCATGGTGCTGCAGGGAATGCCTACGCT...CCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TGTTACACGCATGAAGGCAGTCACATCCCATTCCAGCCAAGAGCCGTGTTTTCTCCACTCATACATCAGTaGAGACTTTGCCGCCAAGTT	+
Preference number: 4 (lower is better) Translates to: CYTHEGSHIPFQPRAVFSPLIHQ*RLCRQV Trigger: AACTTGGCGGCAAAGTCTCCACTGATGTATGAGTGG...AGAAAACACGGCTCTTGGCTGGAATGGGATGTGACTGCCTTCATGCGTGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TGTTACACGCATGAAGGCAGTCACATCCCATTCCAGCCAAGAGCCGTGTTTTCTGGTATCATCCAAACATaGAGGGTAATTGCCGGAAGG	+
Preference number: 4 (lower is better) Translates to: CYTHEGSHIPFQPRAVFSGIIQT*RVIAGR Trigger: CCTTCCGGCAATTACCCTCCATGTTTGGATGATACC...AGAAAACACGGCTCTTGGCTGGAATGGGATGTGACTGCCTTCATGCGTGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAGGAACTTGGCCTTTGTaGGGACTAACAGGTCAGCCA	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRGTWPL*GLTGQP Trigger: TGGCTGACCTGTTAGTCCCCACAAAGGCCAAGTTCC...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGAGGAACTTGGCCTTTGTaGGGACTAACAGGTCAGCCA	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGGTWPL*GLTGQP Trigger: TGGCTGACCTGTTAGTCCCCACAAAGGCCAAGTTCC...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
3UTR CAA 72 bp	TTAATGTCAAGTAAGCCGGGGACTACACCTGAGTTCTaGGAGCCTAAGGAGGAGAGAAGTGAAAGATCCCAC	+
Preference number: 4 (lower is better) Translates to: LMSSKPGTTPEF*EPKEERSERSH Trigger: GTGGGATCTTTCACTTCTCTCCTCCTTAGGCTCCAAGAACTCAGGTGTAGTCCCCGGCTTACTTGACATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCCCTCTCTCCATTTGCTaGAGGAGCTCTCGGATCTTA	+
Preference number: 4 (lower is better) Translates to: TRFKFRAEKHKGINRLPGPLSIC*RSSRIL Trigger: TAAGATCCGAGAGCTCCTTCAGCAAATGGAGAGAGG...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	ACATATGAAACCAGCCTTTCCCAGTTTAGTGGCAATGAACCTTGGGGTGATTGCACTTCAGATCCTGTGTaGGGTTGTAGAGTGCCAGGA	+
Preference number: 4 (lower is better) Translates to: TYETSLSQFSGNEPWGDCTSDPV*GCRVPG Trigger: TCCTGGCACTCTACAACCTCACACAGGATCTGAAGT...GCAATCACCCCAAGGTTCATTGCCACTAAACTGGGAAAGGCTGGTTTCATATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTATGCACTCCTCGGCCTaGTTCTCACTGTTCATCTTG	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETMHSSA*FSLFIL Trigger: CAAGATGAACAGTGAGAAGCAGGCCGAGGAGTGCAT...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAGGCTTCACCAAACTATaGAACTTTCCTTGGTTCACC	+
Preference number: 4 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRGFTKL*NFPWFT Trigger: GGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCC...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTGGCTTCACCAAACTATaGAACTTTCCTTGGTTCACC	+
Preference number: 4 (lower is better) Translates to: DVNSFLWPSSMEPPETWSGFTKL*NFPWFT Trigger: GGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCC...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGGAACTTGGCCTTTGTaGGGACTAACAGGTCAGCCA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSGTWPL*GLTGQP Trigger: TGGCTGACCTGTTAGTCCCCACAAAGGCCAAGTTCC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR TCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCCTCTCTCCATTTGCTaGAGGAGCTCTCGGATCTTA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSPLSIC*RSSRIL Trigger: TAAGATCCGAGAGCTCCTTCAGCAAATGGAGAGAGG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR TCA 90 bp	CGTGCCAGATCTCTCCTGCTCTTTACCTTGAAAACGGGTCTCACTAAGTTGCCTTCAATCTTATTTAGGTaGATGAGCCGTGTGATGCAC	+
Preference number: 4 (lower is better) Translates to: RARSLLLFTLKTGLTKLPSILFR*MSRVMH Trigger: GTGCATCACACGGCTCATTCACCTAAATAAGATTGA...AGGCAACTTAGTGAGACCCGTTTTCAAGGTAAAGAGCAGGAGAGATCTGGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCACTTCAGATCCTGTGTaGGGTTGTAGAGTGCCAGGA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSTSDPV*GCRVPG Trigger: TCCTGGCACTCTACAACCTCACACAGGATCTGAAGT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGTAGTAATAAATGCCTaGCAAGCCATGAGCAGCCCC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSVVINA*QAMSSP Trigger: GGGGCTGCTCATGGCTTGGCAGGCATTTATTACTAC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAAACATGGAGGGTAATTaGCGGAAGGAAACTTCAGCC	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRNMEGN*RKETSA Trigger: GGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTT...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGATGTGAGGTTGTAGAGTaGCAGGAAAGCGTAGGCATT	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGCEVVE*QESVGI Trigger: AATGCCTACGCTTTCCTGGCACTCTACAACCTCACA...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGATCACTGTTCATCTTGTaGTACAGCACAGCAGCCACA	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGSLFIL*YSTAAT Trigger: TGTGGCTGCTGTGCTGTACCACAAGATGAACAGTGA...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGAGGTATCATCCAAACATaGAGGGTAATTGCCGGAAGG	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGGIIQT*RVIAGR Trigger: CCTTCCGGCAATTACCCTCCATGTTTGGATGATACC...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTGGACAAGCAGGTCTCTaGTATCATCCAAACATGGAG	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETGQAGL*YHPNME Trigger: CTCCATGTTTGGATGATACCAGAGACCTGCTTGTCC...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGACAAATGCAGGGAACTTaGCCTTTGTGGGGACTAACA	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRQMQGT*PLWGLT Trigger: TGTTAGTCCCCACAAAGGCCAAGTTCCCTGCATTTG...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTTCAGGTAGTAATAAATaGCTGCCAAGCCATGAGCAG	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETSGSNK*LPSHEQ Trigger: CTGCTCATGGCTTGGCAGGCATTTATTACTACCTGA...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGATCAGGTAGTAATAAATaGCTGCCAAGCCATGAGCAG	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGSGSNK*LPSHEQ Trigger: CTGCTCATGGCTTGGCAGGCATTTATTACTACCTGA...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCAACATGGAGGGTAATTaGCGGAAGGAAACTTCAGCC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSNMEGN*RKETSA Trigger: GGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAGGCTCAGAACCCCTTACTGCCCAGTCTCTGGATGGAGATGAACAATGCCACTTTTGAACACCTTGTATaGTTGGATGAGCATATAGAT	+
Preference number: 4 (lower is better) Translates to: QAQNPLLPSLWMEMNNATFEHLV*LDEHID Trigger: ATCTATATGCTCATCCAAGCATACAAGGTGTTCAAA...AGTGGCATTGTTCATCTCCATCCAGAGACTGGGCAGTAAGGGGTTCTGAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTGTGAGGTTGTAGAGTaGCAGGAAAGCGTAGGCATT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSCEVVE*QESVGI Trigger: AATGCCTACGCTTTCCTGGCACTCTACAACCTCACA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCACCACTCAGCAAACTTaGAGGCCCTGTACAGATACT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSTTQQT*RPCTDT Trigger: AGTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCACTGTTCATCTTGTaGTACAGCACAGCAGCCACA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSLFIL*YSTAAT Trigger: TGTGGCTGCTGTGCTGTACCACAAGATGAACAGTGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCCACTCATACATCAGTaGAGACTTTGCCGCCAAGTT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSPLIHQ*RLCRQV Trigger: AACTTGGCGGCAAAGTCTCCACTGATGTATGAGTGG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGGTATCATCCAAACATaGAGGGTAATTGCCGGAAGG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSGIIQT*RVIAGR Trigger: CCTTCCGGCAATTACCCTCCATGTTTGGATGATACC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGGACAAGCAGGTCTCTaGTATCATCCAAACATGGAG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSGQAGL*YHPNME Trigger: CTCCATGTTTGGATGATACCAGAGACCTGCTTGTCC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCAAATGCAGGGAACTTaGCCTTTGTGGGGACTAACA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSQMQGT*PLWGLT Trigger: TGTTAGTCCCCACAAAGGCCAAGTTCCCTGCATTTG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGACAAAGATGTAGCCTATaGGGCCATAGAGCATTTCAT	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRQRCSL*GHRAFH Trigger: ATGAAATGCTCTATGGCCGCATAGGCTACATCTTTG...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCAGGTAGTAATAAATaGCTGCCAAGCCATGAGCAG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSGSNK*LPSHEQ Trigger: CTGCTCATGGCTTGGCAGGCATTTATTACTACCTGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCGGCTTCACCAAACTATaGAACTTTCCTTGGTTCACC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSGFTKL*NFPWFT Trigger: GGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCC...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	ATAAGTAGTAAGAGGAACATTTCCTGCATGTCTGGGAACCATGCGAATGATCAGACCACTCAGCAAACTTaGAGGCCCTGTACAGATACT	+
Preference number: 4 (lower is better) Translates to: ISSKRNISCMSGNHANDQTTQQT*RPCTDT Trigger: AGTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGT...CTGATCATTCGCATGGTTCCCAGACATGCAGGAAATGTTCCTCTTACTACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTAGACAAAGTCTACACTaGGCTTCACCAAACTATGCA	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETRQSLH*ASPNYA Trigger: TGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCT...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGAAGACAAAGTCTACACTaGGCTTCACCAAACTATGCA	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGRQSLH*ASPNYA Trigger: TGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCT...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR TCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCAATCTTATTTAGGTaGATGAGCCGTGTGATGCAC	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSILFR*MSRVMH Trigger: GTGCATCACACGGCTCATTCACCTAAATAAGATTGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCAAAGATGTAGCCTATaGGGCCATAGAGCATTTCAT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSQRCSL*GHRAFH Trigger: ATGAAATGCTCTATGGCCGCATAGGCTACATCTTTG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	AAACTCGACCACTTCAAAGTACACAGTTTCATTCTGCTTCCTTCAAAAGCAAGGCCACTCATACATCAGTaGAGACTTTGCCGCCAAGTT	+
Preference number: 4 (lower is better) Translates to: KLDHFKVHSFILLPSKARPLIHQ*RLCRQV Trigger: AACTTGGCGGCAAAGTCTCCACTGATGTATGAGTGG...CCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCAGACAAAGTCTACACTaGGCTTCACCAAACTATGCA	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSRQSLH*ASPNYA Trigger: TGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTATAGAGCATTTCATTTaGTACGTGGGGATCAATCTT	+
Preference number: 4 (lower is better) Translates to: LDRACVAHEVGFLVQTETIEHFI*YVGINL Trigger: AAGATTGATCCCCACGTACCAAATGAAATGCTCTAT...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR GCA 90 bp	AAACTCGACCACTTCAAAGTACACAGTTTCATTCTGCTTCCTTCAAAAGCAAGGCAAAGATGTAGCCTATaGGGCCATAGAGCATTTCAT	+
Preference number: 4 (lower is better) Translates to: KLDHFKVHSFILLPSKARQRCSL*GHRAFH Trigger: ATGAAATGCTCTATGGCCGCATAGGCTACATCTTTG...CCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	ATGCGAATGATCAGAAGATACTGTACTGTCATCCATCCTTCCCTCTGGAAGGGAATTTCATTTGGTACGTaGGGATCAATCTTATTTAGG	+
Preference number: 4 (lower is better) Translates to: MRMIRRYCTVIHPSLWKGISFGT*GSILFR Trigger: CCTAAATAAGATTGATCCCCACGTACCAAATGAAAT...TCCCTTCCAGAGGGAAGGATGGATGACAGTACAGTATCTTCTGATCATTCGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	TTCTTAGAAGCTACTGGTCAGAGCAGCTCCCTTTCCACACTCTTTGTAAGCAGAATTTCATTTGGTACGTaGGGATCAATCTTATTTAGG	+
Preference number: 4 (lower is better) Translates to: FLEATGQSSSLSTLFVSRISFGT*GSILFR Trigger: CCTAAATAAGATTGATCCCCACGTACCAAATGAAAT...TCTGCTTACAAAGAGTGTGGAAAGGGAGCTGCTCTGACCAGTAGCTTCTAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCATAGAGCATTTCATTTaGTACGTGGGGATCAATCTT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSIEHFI*YVGINL Trigger: AAGATTGATCCCCACGTACCAAATGAAATGCTCTAT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR GCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTTTGAACACCTTGTATaGTTGGATGAGCATATAGAT	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSFEHLV*LDEHID Trigger: ATCTATATGCTCATCCAAGCATACAAGGTGTTCAAA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CCA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCATTTCATTTGGTACGTaGGGATCAATCTTATTTAGG	+
Preference number: 4 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSISFGT*GSILFR Trigger: CCTAAATAAGATTGATCCCCACGTACCAAATGAAAT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 90 bp	GCAGGCCCTGTACAGATACTTCAGATCCTGTGTGAGGTTGTAGAGTaGCAGGAAAGCGTAGGCATTCCCTGCAGCACCATGGCACAGCCC	+
Preference number: 5 (lower is better) Translates to: AGPVQILQILCEVVE*QESVGIPCSTMAQP Trigger: GGGCTGTGCCATGGTGCTGCAGGGAATGCCTACGCTTTCCTGGCACTCTACAACCTCACACAGGATCTGAAGTATCTGTACAGGGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGACTATGCAACTTTCCTaGGTTCACCTGAAGGCTGGG	+
Preference number: 5 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWTMQLS*VHLKAG Trigger: CCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGT...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS TCA 90 bp	ACTCAGCAAACTTGCAGGCCCTGTACAGATACTTCAGATCCTGTGTaGGGTTGTAGAGTGCCAGGAAAGCGTAGGCATTCCCTGCAGCAC	+
Preference number: 5 (lower is better) Translates to: TQQTCRPCTDTSDPV*GCRVPGKRRHSLQH Trigger: GTGCTGCAGGGAATGCCTACGCTTTCCTGGCACTCTACAACCTCACACAGGATCTGAAGTATCTGTACAGGGCCTGCAAGTTTGCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 90 bp	TTGGTTCACCTGAAGGCTGGGCTGCATCAGGTAGTAATAAATGCCTaGCAAGCCATGAGCAGCCCCCACGTAATATTCCTGGTACCACTC	+
Preference number: 5 (lower is better) Translates to: LVHLKAGLHQVVINA*QAMSSPHVIFLVPL Trigger: GAGTGGTACCAGGAATATTACGTGGGGGCTGCTCATGGCTTGGCAGGCATTTATTACTACCTGATGCAGCCCAGCCTTCAGGTGAACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 90 bp	TTCCTTGGTTCACCTGAAGGCTGGGCTGCATCAGGTAGTAATAAATaGCTGCCAAGCCATGAGCAGCCCCCACGTAATATTCCTGGTACC	+
Preference number: 5 (lower is better) Translates to: FLGSPEGWAASGSNK*LPSHEQPPRNIPGT Trigger: GGTACCAGGAATATTACGTGGGGGCTGCTCATGGCTTGGCAGGCATTTATTACTACCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 90 bp	ACCGTGGCACCAATGGACAAGCAGGTCTCTGGTATCATCCAAACATaGAGGGTAATTGCCGGAAGGAAACTTCAGCCGGCAGACAAAGTC	+
Preference number: 5 (lower is better) Translates to: TVAPMDKQVSGIIQT*RVIAGRKLQPADKV Trigger: GACTTTGTCTGCCGGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTTTGGATGATACCAGAGACCTGCTTGTCCATTGGTGCCACGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	GATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGAAACCTGGTCTCAGGGAACTTGGCCTTaGTGGGGACTAACAGGTCAG	+
Preference number: 5 (lower is better) Translates to: DVNSFLWPSSMEPPETWSQGTWP*WGLTGQ Trigger: CTGACCTGTTAGTCCCCACAAAGGCCAAGTTCCCTG...AGACCAGGTTTCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS GCA 90 bp	AATGGACAAGCAGGTCTCTGGTATCATCCAAACATGGAGGGTAATTaGCGGAAGGAAACTTCAGCCGGCAGACAAAGTCTACACTGGGCT	+
Preference number: 5 (lower is better) Translates to: NGQAGLWYHPNMEGN*RKETSAGRQSLHWA Trigger: AGCCCAGTGTAGACTTTGTCTGCCGGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTTTGGATGATACCAGAGACCTGCTTGTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 90 bp	GGTAATTGCCGGAAGGAAACTTCAGCCGGCAGACAAAGTCTACACTaGGCTTCACCAAACTATGCAACTTTCCTTGGTTCACCTGAAGGC	+
Preference number: 5 (lower is better) Translates to: GNCRKETSAGRQSLH*ASPNYATFLGSPEG Trigger: GCCTTCAGGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCTGCCGGCTGAAGTTTCCTTCCGGCAATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGACAGACAGTTGAGGCTTaGCTTTACATAGCTGTGCGC	+
Preference number: 5 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRQTVEA*LYIAVR Trigger: GCGCACAGCTATGTAAAGCAAAGCCTCAACTGTCTG...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	AGGAGGCAACACTCATCAGGATGCCTGGGGAAGCACTGTGACCAAGTCTACTGGTCTTCTTTGAACACCTaGTATGCTTGGATGAGCATA	+
Preference number: 5 (lower is better) Translates to: RRQHSSGCLGKHCDQVYWSSLNT*YAWMSI Trigger: TATGCTCATCCAAGCATACAAGGTGTTCAAAGAAGA...CCAGTAGACTTGGTCACAGTGCTTCCCCAGGCATCCTGATGAGTGTTGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTCACCACTCAGCAAACTaGCAGGCCCTGTACAGATAC	+
Preference number: 5 (lower is better) Translates to: LDRACVAHEVGFLVQTETHHSAN*QALYRY Trigger: GTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGTG...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCCACCACTCAGCAAACTaGCAGGCCCTGTACAGATAC	+
Preference number: 5 (lower is better) Translates to: TRFKFRAEKHKGINRLPGHHSAN*QALYRY Trigger: GTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGTG...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCAGGGAACTTGGCCTTaGTGGGGACTAACAGGTCAG	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSQGTWP*WGLTGQ Trigger: CTGACCTGTTAGTCCCCACAAAGGCCAAGTTCCCTG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	CTAGATAGGGCCTGTGTGGCTCATGAAGTGGGATTTCTAGTTCAGACAGAAACTCAGACAGTTGAGGCTTaGCTTTACATAGCTGTGCGC	+
Preference number: 5 (lower is better) Translates to: LDRACVAHEVGFLVQTETQTVEA*LYIAVR Trigger: GCGCACAGCTATGTAAAGCAAAGCCTCAACTGTCTG...AGTTTCTGTCTGAACTAGAAATCCCACTTCATGAGCCACACAGGCCCTATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCACTATGCAACTTTCCTaGGTTCACCTGAAGGCTGGG	+
Preference number: 5 (lower is better) Translates to: TRFKFRAEKHKGINRLPGTMQLS*VHLKAG Trigger: CCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGT...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCACCACTCAGCAAACTaGCAGGCCCTGTACAGATAC	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSHHSAN*QALYRY Trigger: GTATCTGTACAGGGCCTGCAAGTTTGCTGAGTGGTG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS TCA 90 bp	CTCCATTTGCTGAAGGAGCTCTCGGATCTTATTGGTCAAGCGATGTaGGAACTCAGGAGTCAGCCTCCCAGTAGAATCAAAGTAGTTTTC	+
Preference number: 5 (lower is better) Translates to: LHLLKELSDLIGQAM*ELRSQPPSRIKVVF Trigger: GAAAACTACTTTGATTCTACTGGGAGGCTGACTCCTGAGTTCTCACATCGCTTGACCAATAAGATCCGAGAGCTCCTTCAGCAAATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8 ENSMUST00000149996.2
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCCAGACAGTTGAGGCTTaGCTTTACATAGCTGTGCGC	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSQTVEA*LYIAVR Trigger: GCGCACAGCTATGTAAAGCAAAGCCTCAACTGTCTG...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	TGTTACACGCATGAAGGCAGTCACATCCCATTCCAGCCAAGAGCCGTGTTTTCTCATAGAGCATTTCATTaGGTACGTGGGGATCAATCT	+
Preference number: 5 (lower is better) Translates to: CYTHEGSHIPFQPRAVFSHRAFH*VRGDQS Trigger: AGATTGATCCCCACGTACCAAATGAAATGCTCTATG...AGAAAACACGGCTCTTGGCTGGAATGGGATGTGACTGCCTTCATGCGTGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACATATGAAACCAGCCTTTCCCAGTTTAGTGGCAATGAACCTTGGGGTGATTGCACATCAGTGGAGACTTaGCCGCCAAGTTTCTCTTTC	+
Preference number: 5 (lower is better) Translates to: TYETSLSQFSGNEPWGDCTSVET*PPSFSF Trigger: GAAAGAGAAACTTGGCGGCAAAGTCTCCACTGATGT...GCAATCACCCCAAGGTTCATTGCCACTAAACTGGGAAAGGCTGGTTTCATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCACTATGCAACTTTCCTaGGTTCACCTGAAGGCTGGG	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSTMQLS*VHLKAG Trigger: CCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	AAACTCGACCACTTCAAAGTACACAGTTTCATTCTGCTTCCTTCAAAAGCAAGGCAGGGAACTTGGCCTTaGTGGGGACTAACAGGTCAG	+
Preference number: 5 (lower is better) Translates to: KLDHFKVHSFILLPSKARQGTWP*WGLTGQ Trigger: CTGACCTGTTAGTCCCCACAAAGGCCAAGTTCCCTG...CCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCAAATGCAGGGAACTaGGCCTTTGTGGGGACTAAC	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSNAGN*AFVGTN Trigger: GTTAGTCCCCACAAAGGCCAAGTTCCCTGCATTTGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCACATCAGTGGAGACTTaGCCGCCAAGTTTCTCTTTC	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSTSVET*PPSFSF Trigger: GAAAGAGAAACTTGGCGGCAAAGTCTCCACTGATGT...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	CTGTTCACCAGATGTAAACAGTTTTCTATGGCCCAGCAGTATGGAGCCCCCAGATCTTCTTTGAACACCTaGTATGCTTGGATGAGCATA	+
Preference number: 5 (lower is better) Translates to: LFTRCKQFSMAQQYGAPRSSLNT*YAWMSI Trigger: TATGCTCATCCAAGCATACAAGGTGTTCAAAGAAGA...TCTGGGGGCTCCATACTGCTGGGCCATAGAAAACTGTTTACATCTGGTGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ATAAGTAGTAAGAGGAACATTTCCTGCATGTCTGGGAACCATGCGAATGATCAGTCAAATGCAGGGAACTaGGCCTTTGTGGGGACTAAC	+
Preference number: 5 (lower is better) Translates to: ISSKRNISCMSGNHANDQSNAGN*AFVGTN Trigger: GTTAGTCCCCACAAAGGCCAAGTTCCCTGCATTTGA...CTGATCATTCGCATGGTTCCCAGACATGCAGGAAATGTTCCTCTTACTACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCCATAGAGCATTTCATTaGGTACGTGGGGATCAATCT	+
Preference number: 5 (lower is better) Translates to: TRFKFRAEKHKGINRLPGHRAFH*VRGDQS Trigger: AGATTGATCCCCACGTACCAAATGAAATGCTCTATG...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	AAACTCGACCACTTCAAAGTACACAGTTTCATTCTGCTTCCTTCAAAAGCAAGGACATCAGTGGAGACTTaGCCGCCAAGTTTCTCTTTC	+
Preference number: 5 (lower is better) Translates to: KLDHFKVHSFILLPSKARTSVET*PPSFSF Trigger: GAAAGAGAAACTTGGCGGCAAAGTCTCCACTGATGT...CCTTGCTTTTGAAGGAAGCAGAATGAAACTGTGTACTTTGAAGTGGTCGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACACGATTCAAGTTTAGGGCTGAAAAGCACAAGGGGATAAATAGACTGCCTGGCTCTCCAAAGTTCTTATaGACAAAAAGCAGAGCAAAG	+
Preference number: 5 (lower is better) Translates to: TRFKFRAEKHKGINRLPGSPKFL*TKSRAK Trigger: CTTTGCTCTGCTTTTTGTCAATAAGAACTTTGGAGA...GCCAGGCAGTCTATTTATCCCCTTGTGCTTTTCAGCCCTAAACTTGAATCGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	ACATATGAAACCAGCCTTTCCCAGTTTAGTGGCAATGAACCTTGGGGTGATTGCTCTCCAAAGTTCTTATaGACAAAAAGCAGAGCAAAG	+
Preference number: 5 (lower is better) Translates to: TYETSLSQFSGNEPWGDCSPKFL*TKSRAK Trigger: CTTTGCTCTGCTTTTTGTCAATAAGAACTTTGGAGA...GCAATCACCCCAAGGTTCATTGCCACTAAACTGGGAAAGGCTGGTTTCATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCTTCTTTGAACACCTaGTATGCTTGGATGAGCATA	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSSLNT*YAWMSI Trigger: TATGCTCATCCAAGCATACAAGGTGTTCAAAGAAGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS-3UTR CAA 90 bp	CAAAAGCAAGGGCAATATGTAGCCCAGAGTAATACACAGAGTCATGCTGTAAGCTCTCCAAAGTTCTTATaGACAAAAAGCAGAGCAAAG	+
Preference number: 5 (lower is better) Translates to: QKQGQYVAQSNTQSHAVSSPKFL*TKSRAK Trigger: CTTTGCTCTGCTTTTTGTCAATAAGAACTTTGGAGA...GCTTACAGCATGACTCTGTGTATTACTCTGGGCTACATATTGCCCTTGCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 72 bp	TCCCTTCAAAGAGGGAGAAGGGGGTGTCCGCTGTCCTaGATCCGTGCTCCCCGTAGTCTAAGCACCACTCAG	+
Preference number: 6 (lower is better) Translates to: SLQRGRRGCPLS*IRAPRSLSTTQ Trigger: CTGAGTGGTGCTTAGACTACGGGGAGCACGGATGCAGGACAGCGGACACCCCCTTCTCCCTCTTTGAAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 72 bp	CAGGAGCACCGTGGCACCAATGGACAAGCAGGTCTCTaGTATCATCCAAACATGGAGGGTAATTGCCGGAAG	+
Preference number: 6 (lower is better) Translates to: QEHRGTNGQAGL*YHPNMEGNCRK Trigger: CTTCCGGCAATTACCCTCCATGTTTGGATGATACCAGAGACCTGCTTGTCCATTGGTGCCACGGTGCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 72 bp	CTGAAGGCTGGGCTGCATCAGGTAGTAATAAATGCCTaGCAAGCCATGAGCAGCCCCCACGTAATATTCCTG	+
Preference number: 6 (lower is better) Translates to: LKAGLHQVVINA*QAMSSPHVIFL Trigger: CAGGAATATTACGTGGGGGCTGCTCATGGCTTGGCAGGCATTTATTACTACCTGATGCAGCCCAGCCTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS TCA 72 bp	ACTTGCAGGCCCTGTACAGATACTTCAGATCCTGTGTaGGGTTGTAGAGTGCCAGGAAAGCGTAGGCATTCC	+
Preference number: 6 (lower is better) Translates to: TCRPCTDTSDPV*GCRVPGKRRHS Trigger: GGAATGCCTACGCTTTCCTGGCACTCTACAACCTCACACAGGATCTGAAGTATCTGTACAGGGCCTGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 72 bp	TCACCTGAAGGCTGGGCTGCATCAGGTAGTAATAAATaGCTGCCAAGCCATGAGCAGCCCCCACGTAATATT	+
Preference number: 6 (lower is better) Translates to: SPEGWAASGSNK*LPSHEQPPRNI Trigger: AATATTACGTGGGGGCTGCTCATGGCTTGGCAGGCATTTATTACTACCTGATGCAGCCCAGCCTTCAGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 72 bp	GTACAGATACTTCAGATCCTGTGTGAGGTTGTAGAGTaGCAGGAAAGCGTAGGCATTCCCTGCAGCACCATG	+
Preference number: 6 (lower is better) Translates to: VQILQILCEVVE*QESVGIPCSTM Trigger: CATGGTGCTGCAGGGAATGCCTACGCTTTCCTGGCACTCTACAACCTCACACAGGATCTGAAGTATCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 72 bp	CTCTCTCCATTTGCTGAAGGAGCTCTCGGATCTTATTaGTCAAGCGATGTGAGAACTCAGGAGTCAGCCTCC	+
Preference number: 6 (lower is better) Translates to: LSPFAEGALGSY*SSDVRTQESAS Trigger: GGAGGCTGACTCCTGAGTTCTCACATCGCTTGACCAATAAGATCCGAGAGCTCCTTCAGCAAATGGAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8 ENSMUST00000149996.2
CDS GCA 72 bp	GCAGGTCTCTGGTATCATCCAAACATGGAGGGTAATTaGCGGAAGGAAACTTCAGCCGGCAGACAAAGTCTA	+
Preference number: 6 (lower is better) Translates to: AGLWYHPNMEGN*RKETSAGRQSL Trigger: TAGACTTTGTCTGCCGGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTTTGGATGATACCAGAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CAA 72 bp	GTCTACACTGGGCTTCACCAAACTATGCAACTTTCCTaGGTTCACCTGAAGGCTGGGCTGCATCAGGTAGTA	+
Preference number: 6 (lower is better) Translates to: VYTGLHQTMQLS*VHLKAGLHQVV Trigger: TACTACCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCCCAGTGTAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CAA 72 bp	CCTTTGTGGGGACTAACAGGTCAGCCAAGAAATATATaGTTCCAGCCATCCCTTCAAAGAGGGAGAAGGGGG	+
Preference number: 6 (lower is better) Translates to: PLWGLTGQPRNI*FQPSLQRGRRG Trigger: CCCCCTTCTCCCTCTTTGAAGGGATGGCTGGAACAATATATTTCTTGGCTGACCTGTTAGTCCCCACAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 72 bp	CCAAACTATGCAACTTTCCTTGGTTCACCTGAAGGCTaGGCTGCATCAGGTAGTAATAAATGCCTGCCAAGC	+
Preference number: 6 (lower is better) Translates to: PNYATFLGSPEG*AASGSNKCLPS Trigger: GCTTGGCAGGCATTTATTACTACCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CCA 72 bp	CGGAAGGAAACTTCAGCCGGCAGACAAAGTCTACACTaGGCTTCACCAAACTATGCAACTTTCCTTGGTTCA	+
Preference number: 6 (lower is better) Translates to: RKETSAGRQSLH*ASPNYATFLGS Trigger: TGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCTGCCGGCTGAAGTTTCCTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS CAA 90 bp	GCAGACAAAGTCTACACTGGGCTTCACCAAACTATGCAACTTTCCTaGGTTCACCTGAAGGCTGGGCTGCATCAGGTAGTAATAAATGCC	+
Preference number: 6 (lower is better) Translates to: ADKVYTGLHQTMQLS*VHLKAGLHQVVINA Trigger: GGCATTTATTACTACCTGATGCAGCCCAGCCTTCAGGTGAACCAAGGAAAGTTGCATAGTTTGGTGAAGCCCAGTGTAGACTTTGTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8
CDS GCA 72 bp	ATCACACAGGTAACGCTCTTCTTTGAACACCTTGTATaGTTGGATGAGCATATAGATGACCCCAGGAGCACC	+
Preference number: 6 (lower is better) Translates to: ITQVTLFFEHLV*LDEHIDDPRST Trigger: GGTGCTCCTGGGGTCATCTATATGCTCATCCAAGCATACAAGGTGTTCAAAGAAGAGCGTTACCTGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027149.12 ENSMUST00000113979.10 ENSMUST00000119559.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu