Pregenerated sensors for LAMTOR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087260Ensembl transcript IDs: ENSMUST00000145735.6, ENSMUST00000199317.2
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGAAGTCAGCCTGGGCTACATAGTTCTAGGCCATGATGGGCTGTaGTCCTGGACTACAGTGACTGTCACCAAAGAGCAGAGTGACAAA | + |
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Preference number: 1 (lower is better) Translates to: FEVSLGYIVLGHDGL*SWTTVTVTKEQSDK Trigger: TTTGTCACTCTGCTCTTTGGTGACAGTCACTGTAGTCCAGGATCACAGCCCATCATGGCCTAGAACTATGTAGCCCAGGCTGACTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR GCA 90 bp | ACAGTGACTGTCACCAAAGAGCAGAGTGACAAAAGCCCAAACAATTaGTCCTCTCTAACTGATGTCTTGGTAACTGGCTGTCATATAAAT | + |
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Preference number: 1 (lower is better) Translates to: TVTVTKEQSDKSPNN*SSLTDVLVTGCHIN Trigger: ATTTATATGACAGCCAGTTACCAAGACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTTGTCACTCTGCTCTTTGGTGACAGTCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACTGATGTCTTGGTAACTGGCTGTCATATAAATAAGGGAGTCCACATTGGAATGACTGAATCCCGGTaGGAGGCCACTGGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LTDVLVTGCHINKGVHIGMTESR*EATGEL Trigger: CAGCTCTCCAGTGGCCTCTCACCGGGATTCAGTCAT...TCCAATGTGGACTCCCTTATTTATATGACAGCCAGTTACCAAGACATCAGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACTGATGTCTTGGTAACTGGCTGTCATATAAATAAGGGAGTCCACATTGGAGAGCTGAGACAGGCATaGCTGAATCCCGGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LTDVLVTGCHINKGVHIGELRQA*LNPGER Trigger: CCTCTCACCGGGATTCAGTCATGCCTGTCTCAGCTC...TCCAATGTGGACTCCCTTATTTATATGACAGCCAGTTACCAAGACATCAGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGATGACTGAATCCCGGTaGGAGGCCACTGGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVMTESR*EATGEL Trigger: CAGCTCTCCAGTGGCCTCTCACCGGGATTCAGTCAT...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | GACAAATGCTTTAATTCCAGGATGTATGTGTTTAAAGCAGGAAGACCATACATTGAGCTGAGACAGGCATaGCTGAATCCCGGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DKCFNSRMYVFKAGRPYIELRQA*LNPGER Trigger: CCTCTCACCGGGATTCAGTCATGCCTGTCTCAGCTC...AATGTATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAAAGCATTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGCATAGTTCTAGGCCATaGTGGGCTGTGATCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVHSSRP*WAVILD Trigger: GTCCAGGATCACAGCCCATCATGGCCTAGAACTATG...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGGATCCTGGACTACAGTaGCTGTCACCAAAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVDPGLQ*LSPKSR Trigger: TCTGCTCTTTGGTGACAGTCACTGTAGTCCAGGATC...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGGGAAGACCATACATTTaGAGTCAGCCTGGGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVGRPYI*SQPGLH Trigger: ATGTAGCCCAGGCTGACTTCAAATGTATGGTCTTCC...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATTCCAGGATGTATGTGTTTAAAGCAGGAAGACCATACATTTGAAGTCAGCAAAAGCCCAAACAATTaGTCCTCTCTAACTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: LIPGCMCLKQEDHTFEVSKSPNN*SSLTDV Trigger: GACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTT...GCTGACTTCAAATGTATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGTGGACATTAACTGAATaGCCTATTTCTGGAACTTTA | + |
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Preference number: 2 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVWTLTE*PISGTL Trigger: TAAAGTTCCAGAAATAGGCCATTCAGTTAATGTCCA...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR TCA 72 bp | AGCCTGGGCTACATAGTTCTAGGCCATGATGGGCTGTaGTCCTGGACTACAGTGACTGTCACCAAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SLGYIVLGHDGL*SWTTVTVTKEQ Trigger: CTGCTCTTTGGTGACAGTCACTGTAGTCCAGGATCACAGCCCATCATGGCCTAGAACTATGTAGCCCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR GCA 72 bp | GTCACCAAAGAGCAGAGTGACAAAAGCCCAAACAATTaGTCCTCTCTAACTGATGTCTTGGTAACTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VTKEQSDKSPNN*SSLTDVLVTGC Trigger: ACAGCCAGTTACCAAGACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTTGTCACTCTGCTCTTTGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| 3UTR-3UTR CAA 90 bp | ATACAAAGTGACCTAAACCTTAGTGACAAATGCTTTAATTCCAGGATGTATGTGAGGAAGACCATACATTaGAAGTCAGCCTGGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: IQSDLNLSDKCFNSRMYVRKTIH*KSAWAT Trigger: TGTAGCCCAGGCTGACTTCAAATGTATGGTCTTCCT...CACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS-3UTR TCA 90 bp | AAAAGCCCAAACAATTGCTCCTCTCTAACTGATGTCTTGGTAACTGGCTGTCATTGTGCACAGCCACTGTaGTGCCATCGTGTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSPNNCSSLTDVLVTGCHCAQPL*CHRVSG Trigger: TCCAGAAACACGATGGCATCACAGTGGCTGTGCACA...ATGACAGCCAGTTACCAAGACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS-3UTR TCA 90 bp | CTAACTGATGTCTTGGTAACTGGCTGTCATATAAATAAGGGAGTCCACATTGGATGTGCACAGCCACTGTaGTGCCATCGTGTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LTDVLVTGCHINKGVHIGCAQPL*CHRVSG Trigger: TCCAGAAACACGATGGCATCACAGTGGCTGTGCACA...TCCAATGTGGACTCCCTTATTTATATGACAGCCAGTTACCAAGACATCAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS-3UTR GCA 90 bp | GACAAATGCTTTAATTCCAGGATGTATGTGTTTAAAGCAGGAAGACCATACATTGTGTCCTCCAAATGCTaGTCCAAAGTCGCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: DKCFNSRMYVFKAGRPYIVSSKC*SKVASI Trigger: GATGGAGGCGACTTTGGAGCAGCATTTGGAGGACAC...AATGTATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAAAGCATTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145735.6 |
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| 3UTR CAA 72 bp | AAAAGCCCAAACAATTGCTCCTCTCTAACTGATGTCTaGGTAACTGGCTGTCATATAAATAAGGGAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KSPNNCSSLTDV*VTGCHINKGVH Trigger: GTGGACTCCCTTATTTATATGACAGCCAGTTACCAAGACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS TCA 90 bp | CAGCAAAACACTTCCTCCTTCACCGCAAACCTCGATCACGTGACTTaGCCGAGGCGGGCGCCTGGACGGCGTCTCCAGAGGGACGAAATT | + |
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Preference number: 5 (lower is better) Translates to: QQNTSSFTANLDHVT*PRRAPGRRLQRDEI Trigger: AATTTCGTCCCTCTGGAGACGCCGTCCAGGCGCCCGCCTCGGTCAAGTCACGTGATCGAGGTTTGCGGTGAAGGAGGAAGTGTTTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145735.6 |
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| CDS-3UTR CAA 90 bp | TTAATTCCAGGATGTATGTGTTTAAAGCAGGAAGACCATACATTTGAAGTCAGCTGGATGGATTCTTCATaGTGTCCTCCAAATGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LIPGCMCLKQEDHTFEVSWMDSS*CPPNAA Trigger: AGCAGCATTTGGAGGACACAATGAAGAATCCATCCA...GCTGACTTCAAATGTATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS-3UTR CAA 90 bp | GACAAATGCTTTAATTCCAGGATGTATGTGTTTAAAGCAGGAAGACCATACATTTGGATGGATTCTTCATaGTGTCCTCCAAATGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: DKCFNSRMYVFKAGRPYIWMDSS*CPPNAA Trigger: AGCAGCATTTGGAGGACACAATGAAGAATCCATCCA...AATGTATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAAAGCATTTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145735.6 ENSMUST00000199317.2 |
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| CDS TCA 72 bp | ACTTCCTCCTTCACCGCAAACCTCGATCACGTGACTTaGCCGAGGCGGGCGCCTGGACGGCGTCTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSSFTANLDHVT*PRRAPGRRLQR Trigger: CCTCTGGAGACGCCGTCCAGGCGCCCGCCTCGGTCAAGTCACGTGATCGAGGTTTGCGGTGAAGGAGGAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145735.6 |
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