RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMTOR4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050552

Ensembl transcript IDs: ENSMUST00000062067.8

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACCCCGTGCCATGGTGCAACTaGAAGCCACAGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PNSSKDSRRWYASPPPHPVPWCN*KPQAVL
Trigger: CAGCACAGCCTGTGGCTTCCAGTTGCACCATGGCAC...GGGGTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR TCA 90 bp AAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACAGCCACAGGCTGTGCTaGCCAACTCCGAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: KPNSSKDSRRWYASPPPHSHRLC*PTPRWH
Trigger: GTGCCATCTCGGAGTTGGTCAGCACAGCCTGTGGCT...GTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR CCA 90 bp CCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACCCCACTCCGAGATGGCACTaGCTGCTTGCTCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: PNSSKDSRRWYASPPPHPTPRWH*LLAHRS
Trigger: AGAACGATGAGCAAGCAGCCAGTGCCATCTCGGAGT...GGGGTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR GCA 90 bp AGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACCCGAGATGGCACTGGCTaGTTGCTCATCGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SPTPARTAEGGMLPHPHTRDGTG*LLIVLK
Trigger: CTTGAGAACGATGAGCAAGCAGCCAGTGCCATCTCG...GGTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR CCA 90 bp GTGAGCACAAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACGGGATGTTCGTGCCATaGTGCAACTGGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VSTSPTPARTAEGGMLPHGMFVP*CNWKPQ
Trigger: CTGTGGCTTCCAGTTGCACCATGGCACGAACATCCC...GTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTTGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR GCA 90 bp GTGAGCACAAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACATGGCACTGGCTGCTTaGTCATCGTTCTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSTSPTPARTAEGGMLPHMALAA*SSFSRS
Trigger: GGACCTTGAGAACGATGAGCAAGCAGCCAGTGCCAT...GTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTTGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR GCA 90 bp AAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACTCACGACCTCGGTTCTaGCTCTTCACTACAAACACC +
Preference number: 4 (lower is better)
Translates to: KPNSSKDSRRWYASPPPHSRPRF*LFTTNT
Trigger: GGTGTTTGTAGTGAAGAGGCAGAACCGAGGTCGTGA...GTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR CCA 90 bp AAGGAGGTAGTGAGCACAAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGGTAGCCAAGCTGGTCTaGGATTCGCTCCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KEVVSTSPTPARTAEGGMVAKLV*DSLQPL
Trigger: CAAGGGCTGGAGCGAATCCCAGACCAGCTTGGCTAC...CATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTTGTGCTCACTACCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR CAA 90 bp CCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACCCCCACACCCCGATTCGCTCCAGCCCTaGGGTCAGTGCGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: PNSSKDSRRWYASPPPHPDSLQP*GQCGSH
Trigger: ATGACTTCCGCACTGACCCAAGGGCTGGAGCGAATC...GGGGTGTGGGGGTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CCA 90 bp ACCACAGACAGGCGTTTGAAAGGGATGTTCGTGCCATGGTGCAACTaGAAGCCACAGGCTGTGCTGACCAACTCCGAGATGGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: TTDRRLKGMFVPWCN*KPQAVLTNSEMALA
Trigger: AGCCAGTGCCATCTCGGAGTTGGTCAGCACAGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS-3UTR CAA 90 bp GTGAGCACAAGCCCAACTCCAGCAAGGACAGCAGAAGGTGGTATGCTTCCCCACGATGGCACTGGCTGCTaGCTCATCGTTCTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSTSPTPARTAEGGMLPHDGTGC*LIVLKV
Trigger: GACCTTGAGAACGATGAGCAAGCAGCCAGTGCCATC...GTGGGGAAGCATACCACCTTCTGCTGTCCTTGCTGGAGTTGGGCTTGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS TCA 90 bp CAGTCACCAGCAGCGTGTGTTCACCAAAGACCACAGACAGGCGTTTaGAAGGGATGTTCGTGCCATGGTGCAACTGGAAGCCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSPAACVHQRPQTGV*KGCSCHGATGSHRL
Trigger: CAGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGTCTTTGGTGAACACACGCTGCTGGTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CCA 90 bp TCACCAAAGACCACAGACAGGCGTTTGAAAGGGATGTTCGTGCCATaGTGCAACTGGAAGCCACAGGCTGTGCTGACCAACTCCGAGATG +
Preference number: 5 (lower is better)
Translates to: SPKTTDRRLKGMFVP*CNWKPQAVLTNSEM
Trigger: CATCTCGGAGTTGGTCAGCACAGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGTCTTTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS TCA 90 bp TTCACGACCTCGGTTCTGCCTCTTCACTACAAACACCCTCTGTCCTaGCACAGTCACCAGCAGCGTGTGTTCACCAAAGACCACAGACAG +
Preference number: 5 (lower is better)
Translates to: FTTSVLPLHYKHPLS*HSHQQRVFTKDHRQ
Trigger: CTGTCTGTGGTCTTTGGTGAACACACGCTGCTGGTGACTGTGTCAGGACAGAGGGTGTTTGTAGTGAAGAGGCAGAACCGAGGTCGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CCA 72 bp TGCACCTTCGCTCAGCACCAGGTAGCCAAGCTGGTCTaGGATTCGCTCCAGCCCTTGGGTCAGTGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: CTFAQHQVAKLV*DSLQPLGQCGS
Trigger: ACTTCCGCACTGACCCAAGGGCTGGAGCGAATCCCAGACCAGCTTGGCTACCTGGTGCTGAGCGAAGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS GCA 72 bp GCTGTGCTGACCAACTCCGAGATGGCACTGGCTGCTTaGTCATCGTTCTCAAGGTCCCCAGATGACGCCAGC +
Preference number: 6 (lower is better)
Translates to: AVLTNSEMALAA*SSFSRSPDDAS
Trigger: GCTGGCGTCATCTGGGGACCTTGAGAACGATGAGCAAGCAGCCAGTGCCATCTCGGAGTTGGTCAGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CCA 72 bp AGGCGTTTGAAAGGGATGTTCGTGCCATGGTGCAACTaGAAGCCACAGGCTGTGCTGACCAACTCCGAGATG +
Preference number: 6 (lower is better)
Translates to: RRLKGMFVPWCN*KPQAVLTNSEM
Trigger: CATCTCGGAGTTGGTCAGCACAGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CCA 72 bp ACCACAGACAGGCGTTTGAAAGGGATGTTCGTGCCATaGTGCAACTGGAAGCCACAGGCTGTGCTGACCAAC +
Preference number: 6 (lower is better)
Translates to: TTDRRLKGMFVP*CNWKPQAVLTN
Trigger: GTTGGTCAGCACAGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CAA 90 bp ACAGTCACCAGCAGCGTGTGTTCACCAAAGACCACAGACAGGCGTTaGAAAGGGATGTTCGTGCCATGGTGCAACTGGAAGCCACAGGCT +
Preference number: 6 (lower is better)
Translates to: TVTSSVCSPKTTDRR*KGMFVPWCNWKPQA
Trigger: AGCCTGTGGCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGTCTTTGGTGAACACACGCTGCTGGTGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS TCA 72 bp GCAGCGTGTGTTCACCAAAGACCACAGACAGGCGTTTaGAAGGGATGTTCGTGCCATGGTGCAACTGGAAGC +
Preference number: 6 (lower is better)
Translates to: AACVHQRPQTGV*KGCSCHGATGS
Trigger: GCTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGTCTTTGGTGAACACACGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS TCA 72 bp TCGGTTCTGCCTCTTCACTACAAACACCCTCTGTCCTaGCACAGTCACCAGCAGCGTGTGTTCACCAAAGAC +
Preference number: 6 (lower is better)
Translates to: SVLPLHYKHPLS*HSHQQRVFTKD
Trigger: GTCTTTGGTGAACACACGCTGCTGGTGACTGTGTCAGGACAGAGGGTGTTTGTAGTGAAGAGGCAGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8
CDS CAA 72 bp AGCAGCGTGTGTTCACCAAAGACCACAGACAGGCGTTaGAAAGGGATGTTCGTGCCATGGTGCAACTGGAAG +
Preference number: 6 (lower is better)
Translates to: SSVCSPKTTDRR*KGMFVPWCNWK
Trigger: CTTCCAGTTGCACCATGGCACGAACATCCCTTTCAAACGCCTGTCTGTGGTCTTTGGTGAACACACGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062067.8