Pregenerated sensors for LAMTOR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028062Ensembl transcript IDs: ENSMUST00000029698.15, ENSMUST00000119002.2
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTGGTTCCTCCAGGTACTaGACCAGGGCCTGGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFGSSRY*TRAWAL Trigger: TAAGGCCCAGGCCCTGGTGCAGTACCTGGAGGAACC...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS-3UTR GCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTGCTTGGCTTAGCACCTaGGTCAAAGCCTTGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFAWLST*VKALGR Trigger: GCGTCCCAAGGCTTTGACGCAGGTGCTAAGCCAAGC...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTGGACTCCTCCAGTGTTaGCTTGGCTTAGCACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFGLLQC*LGLAPA Trigger: CGCAGGTGCTAAGCCAAGCCAACACTGGAGGAGTCC...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTAGCAGCAGGGTGCTCTaGACTCCTCCAGTGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFSSRVL*TPPVLA Trigger: AGCCAACACTGGAGGAGTCCAGAGCACCCTGCTGCT...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR GCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTTATTCAGCAGCAGGGTaGTCTGGACTCCTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFYSAAG*SGLLQC Trigger: ACACTGGAGGAGTCCAGAGCACCCTGCTGCTGAATA...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTCCTCCAGTGTTGGCTTaGCTTAGCACCTGCGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFPPVLA*LSTCVK Trigger: TTTGACGCAGGTGCTAAGCCAAGCCAACACTGGAGG...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTTATGATGCTGCTACTTaGGTGAGGGGTTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFYDAAT*VRGSSR Trigger: CCTGGAGGAACCCCTCACCCAAGTAGCAGCATCATA...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTAGCCTACGGTCTCCTTaGCATACATACATAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFSLRSP*HTYIAE Trigger: TTCTGCTATGTATGTATGCCAAGGAGACCGTAGGCT...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS-3UTR CCA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTTCTTCATTAAACGCTTaGTTCCCGTTCCTATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFSSLNA*FPFLSY Trigger: GTATGATAGGAACGGGAACCAAGCGTTTAATGAAGA...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS TCA 90 bp | CGTTCCTATCATACGCGGCCCAGATGTTACTGGCGATGGCCGCAGTaGCCCGGGCATCTGTGTCCCCATAACCGGAGTAGGCCAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RSYHTRPRCYWRWPQ*PGHLCPHNRSRPAA Trigger: CGCTGCTGGCCTACTCCGGTTATGGGGACACAGATGCCCGGGTCACTGCGGCCATCGCCAGTAACATCTGGGCCGCGTATGATAGGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CAA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTGCCTGGGCCTTAGCCTaGAGCATTCCGAAGCCTACG | + |
|
Preference number: 5 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFAWALA*SIPKPT Trigger: CGTAGGCTTCGGAATGCTCAAGGCTAAGGCCCAGGC...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS-3UTR CAA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTTGGACTCCTCCAGTGTaGGCTTGGCTTAGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFWTPPV*AWLSTC Trigger: GCAGGTGCTAAGCCAAGCCAACACTGGAGGAGTCCA...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS-3UTR CAA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTAAGCCTACGGTCTCCTaGGCATACATACATAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFKPTVS*AYIHSR Trigger: TCTGCTATGTATGTATGCCAAGGAGACCGTAGGCTT...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS-3UTR CAA 90 bp | CCCGATATGGCGTTTCTAGGGCCCCGCCCCTCCCTCCAGATCATCATCCCTTTTGTCTTCATTAAACGCTaGGTTCCCGTTCCTATCATA | + |
|
Preference number: 5 (lower is better) Translates to: PDMAFLGPRPSLQIIIPFVFIKR*VPVPII Trigger: TATGATAGGAACGGGAACCAAGCGTTTAATGAAGAC...AAAAGGGATGATGATCTGGAGGGAGGGGCGGGGCCCTAGAAACGCCATATCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS GCA 72 bp | GATGCTGCTACTTGGGTGAGGGGTTCCTCCAGGTACTaGACCAGGGCCTGGGCCTTAGCCTTGAGCATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: DAATWVRGSSRY*TRAWALALSIP Trigger: CGGAATGCTCAAGGCTAAGGCCCAGGCCCTGGTGCAGTACCTGGAGGAACCCCTCACCCAAGTAGCAGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS CCA 72 bp | AGCAGCAGGGTGCTCTGGACTCCTCCAGTGTTGGCTTaGCTTAGCACCTGCGTCAAAGCCTTGGGACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRVLWTPPVLA*LSTCVKALGRS Trigger: GCTGCGTCCCAAGGCTTTGACGCAGGTGCTAAGCCAAGCCAACACTGGAGGAGTCCAGAGCACCCTGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CCA 72 bp | TATTCAGCAGCAGGGTGCTCTGGACTCCTCCAGTGTTaGCTTGGCTTAGCACCTGCGTCAAAGCCTTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YSAAGCSGLLQC*LGLAPASKPWD Trigger: GTCCCAAGGCTTTGACGCAGGTGCTAAGCCAAGCCAACACTGGAGGAGTCCAGAGCACCCTGCTGCTGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 90 bp | AGGGCCTGGGCCTTAGCCTTGAGCATTCCGAAGCCTACGGTCTCCTaGGCATACATACATAGCAGAAGGTTGGCCACCCTCGTAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAWALALSIPKPTVS*AYIHSRRLATLVMA Trigger: AGCCATTACGAGGGTGGCCAACCTTCTGCTATGTATGTATGCCAAGGAGACCGTAGGCTTCGGAATGCTCAAGGCTAAGGCCCAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS CAA 72 bp | TTATTCAGCAGCAGGGTGCTCTGGACTCCTCCAGTGTaGGCTTGGCTTAGCACCTGCGTCAAAGCCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFSSRVLWTPPV*AWLSTCVKALG Trigger: TCCCAAGGCTTTGACGCAGGTGCTAAGCCAAGCCAACACTGGAGGAGTCCAGAGCACCCTGCTGCTGAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 72 bp | CCTACGGTCTCCTTGGCATACATACATAGCAGAAGGTaGGCCACCCTCGTAATGGCTACACGGCCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PTVSLAYIHSRR*ATLVMATRPSM Trigger: CATGGAGGGCCGTGTAGCCATTACGAGGGTGGCCAACCTTCTGCTATGTATGTATGCCAAGGAGACCGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS CAA 90 bp | ATTCCGAAGCCTACGGTCTCCTTGGCATACATACATAGCAGAAGGTaGGCCACCCTCGTAATGGCTACACGGCCCTCCATGCAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: IPKPTVSLAYIHSRR*ATLVMATRPSMQSI Trigger: GATGGACTGCATGGAGGGCCGTGTAGCCATTACGAGGGTGGCCAACCTTCTGCTATGTATGTATGCCAAGGAGACCGTAGGCTTCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 72 bp | GCCTTAGCCTTGAGCATTCCGAAGCCTACGGTCTCCTaGGCATACATACATAGCAGAAGGTTGGCCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALALSIPKPTVS*AYIHSRRLATL Trigger: GAGGGTGGCCAACCTTCTGCTATGTATGTATGCCAAGGAGACCGTAGGCTTCGGAATGCTCAAGGCTAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029698.15 ENSMUST00000119002.2 |
||
| CDS CAA 72 bp | GCTACACGGCCCTCCATGCAGTCCATCAGGATAAATTaGAGACTGTCTTCATTAAACGCTTGGTTCCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATRPSMQSIRIN*RLSSLNAWFPF Trigger: GAACGGGAACCAAGCGTTTAATGAAGACAGTCTCAAATTTATCCTGATGGACTGCATGGAGGGCCGTGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 90 bp | CATGCAGTCCATCAGGATAAATTTGAGACTGTCTTCATTAAACGCTaGGTTCCCGTTCCTATCATACGCGGCCCAGATGTTACTGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HAVHQDKFETVFIKR*VPVPIIRGPDVTGD Trigger: ATCGCCAGTAACATCTGGGCCGCGTATGATAGGAACGGGAACCAAGCGTTTAATGAAGACAGTCTCAAATTTATCCTGATGGACTGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 90 bp | CTCGTAATGGCTACACGGCCCTCCATGCAGTCCATCAGGATAAATTaGAGACTGTCTTCATTAAACGCTTGGTTCCCGTTCCTATCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LVMATRPSMQSIRIN*RLSSLNAWFPFLSY Trigger: GTATGATAGGAACGGGAACCAAGCGTTTAATGAAGACAGTCTCAAATTTATCCTGATGGACTGCATGGAGGGCCGTGTAGCCATTACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||
| CDS CAA 72 bp | CATCAGGATAAATTTGAGACTGTCTTCATTAAACGCTaGGTTCCCGTTCCTATCATACGCGGCCCAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: HQDKFETVFIKR*VPVPIIRGPDV Trigger: AACATCTGGGCCGCGTATGATAGGAACGGGAACCAAGCGTTTAATGAAGACAGTCTCAAATTTATCCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029698.15 |
||