Pregenerated sensors for LAMTOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030842Ensembl transcript IDs: ENSMUST00000033131.12, ENSMUST00000193465.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCGGTGTCACCCCTACAGTGGTATCTCCATCTTCCCAATGACTaGAGATCTGCCAGGCCCTGTCCTCTTGGCCCCAACCTCACCCTA | + |
|
Preference number: 1 (lower is better) Translates to: LPVSPLQWYLHLPND*RSARPCPLGPNLTL Trigger: TAGGGTGAGGTTGGGGCCAAGAGGACAGGGCCTGGCAGATCTTCAGTCATTGGGAAGATGGAGATACCACTGTAGGGGTGACACCGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR GCA 90 bp | AGGCCGATGGCAATCGGTCCTCCCTTCCCTTGCTTAGTCCTCACTTaGTCCGGCCTCCAGCCTTGTTCTTTCCCTCCACATTCTTCTCCG | + |
|
Preference number: 1 (lower is better) Translates to: RPMAIGPPFPCLVLT*SGLQPCSFPPHSSP Trigger: CGGAGAAGAATGTGGAGGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGGACCGATTGCCATCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR TCA 90 bp | TCAATTCAGACTCAAGCTCGTCTAGACCCTGGTCATAATCCCCAGTaGGGTGCCTGTGAGCACCAAGTCAGGGAAGGGGACAGGAGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: SIQTQARLDPGHNPQ*GACEHQVREGDRSE Trigger: TTCACTCCTGTCCCCTTCCCTGACTTGGTGCTCACAGGCACCTCACTGGGGATTATGACCAGGGTCTAGACGAGCTTGAGTCTGAATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR-3UTR TCA 90 bp | CGGTCCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCGGGGTGGAGACGGGGTaGAGACGAGGGAAGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RSSLPLLSPHLLRPPALFGVETG*RRGKSC Trigger: ACAGCTCTTCCCTCGTCTTCACCCCGTCTCCACCCC...GAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCCCGGGGGCCAGAAGAGGTaGGGTGGAGACGGGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLPLLSPHLLRPPALFFPGGQKR*GGDGVK Trigger: CTTCACCCCGTCTCCACCCCACCTCTTCTGGCCCCC...GGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCCCCCAGAAGAGGTGGGGTaGAGACGGGGTGAAGACGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLPLLSPHLLRPPALFFPPEEVG*RRGEDE Trigger: CTCGTCTTCACCCCGTCTCCACCCCACCTCTTCTGG...GGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR CAA 90 bp | AAGGCCGATGGCAATCGGTCCTCCCTTCCCTTGCTTAGTCCTCACTaGCTCCGGCCTCCAGCCTTGTTCTTTCCCTCCACATTCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KADGNRSSLPLLSPH*LRPPALFFPSTFFS Trigger: GGAGAAGAATGTGGAGGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGGACCGATTGCCATCGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR CAA 90 bp | TCCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTaGTTCTTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPLLSPHLLRPPA*FFPSTFFSVISSRL Trigger: TAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR TCA 72 bp | ACTCAAGCTCGTCTAGACCCTGGTCATAATCCCCAGTaGGGTGCCTGTGAGCACCAAGTCAGGGAAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TQARLDPGHNPQ*GACEHQVREGD Trigger: GTCCCCTTCCCTGACTTGGTGCTCACAGGCACCTCACTGGGGATTATGACCAGGGTCTAGACGAGCTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR GCA 72 bp | GCAATCGGTCCTCCCTTCCCTTGCTTAGTCCTCACTTaGTCCGGCCTCCAGCCTTGTTCTTTCCCTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: AIGPPFPCLVLT*SGLQPCSFPPH Trigger: ATGTGGAGGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGGACCGATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR TCA 72 bp | TCACCCCTACAGTGGTATCTCCATCTTCCCAATGACTaGAGATCTGCCAGGCCCTGTCCTCTTGGCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPLQWYLHLPND*RSARPCPLGPN Trigger: GTTGGGGCCAAGAGGACAGGGCCTGGCAGATCTTCAGTCATTGGGAAGATGGAGATACCACTGTAGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACCCCTACAGTGGTATCTCCATCTTCCCAATGACTGAAGATCTGCCAGGCTTGCTTAGTCCTCACTaGCTCCGGCCTCCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CHPYSGISIFPMTEDLPGLLSPH*LRPPAL Trigger: CAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAA...GCCTGGCAGATCTTCAGTCATTGGGAAGATGGAGATACCACTGTAGGGGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCGGTGGGGCTGGCTGGTaGGAGATGGCAACGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFGGAGW*EMATVA Trigger: TGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACC...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR TCA 90 bp | TGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGTGTGGTGGGGCTGGCTGGTaGGAGATGGCAACGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPQIALPQSIEAQQAPLCGGAGW*EMATVA Trigger: TGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACC...ACACAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCAGCACTTGGTGGGGCTaGCTGGTGAGAGATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFSTWWG*LVRDGN Trigger: GTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCT...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | AACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGCTGGCCAGCACTTGGTaGGGCTGGCTGGTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NWPQIALPQSIEAQQAPLLASTW*GWLVRD Trigger: ATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAG...CAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTTCACTGGCCAGCACTTaGTGGGGCTGGCTGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELATDCSATINRSPAGPSSLAST*WGWLVR Trigger: TCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGA...AGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCGAGGAAAGCAGGGCCTaGTCATCTGTGCGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFEESRA*SSVRAE Trigger: TTCAGCTCGCACAGATGAGCAGGCCCTGCTTTCCTC...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTTGCTGTTCCATGCCCTaGGAGTCTGCGGCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: ELATDCSATINRSPAGPSCCSMP*ESAADT Trigger: TGTGTCTGCCGCAGACTCCCAGGGCATGGAACAGCA...AGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTAGCACTTGGTGGGGCTaGCTGGTGAGAGATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELATDCSATINRSPAGPSSTWWG*LVRDGN Trigger: GTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCT...AGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGGAGGAAAGCAGGGCCTaGTCATCTGTGCGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NWPQIALPQSIEAQQAPLEESRA*SSVRAE Trigger: TTCAGCTCGCACAGATGAGCAGGCCCTGCTTTCCTC...CAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCCCCATGCCCTGGGAGTCTaGGGCAGACACATCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLLSPHLLRPPALFFPHALGV*GRHIND Trigger: ATCATTGATGTGTCTGCCGCAGACTCCCAGGGCATG...GGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGTGTCTGTCTTGGCAAGGATaGAGGAAAGCAGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPQIALPQSIEAQQAPLCLSWQG*RKAGPA Trigger: AGCAGGCCCTGCTTTCCTCCATCCTTGCCAAGACAG...ACACAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCGGCAGCTTCTTCCAATaGGTCAGACTGCTGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFGSFFQ*VRLLLS Trigger: GCTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCC...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTCTGGCTGGTGAGAGATaGCAACGGTGGCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELATDCSATINRSPAGPSLAGER*QRWQLL Trigger: AAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAG...AGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGGCTGGGGGCGGTACTGTACTGCCTTaGCCGGTCCATGTACTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVISSRLGTVESHSEAGGGTVLP*PVHVLM Trigger: CATGAGTACATGGACCGGGCAAGGCAGTACAGTACC...GCCCCCAGCCTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | AACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGGGTACTGTACTGCCTTaGCCGGTCCATGTACTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NWPQIALPQSIEAQQAPLGTVLP*PVHVLM Trigger: CATGAGTACATGGACCGGGCAAGGCAGTACAGTACC...CAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGGAGAGATGGCAACGGTaGCAGCTTCTTCCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NWPQIALPQSIEAQQAPLERWQR*QLLPMG Trigger: ACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTC...CAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACCCCTACAGTGGTATCTCCATCTTCCCAATGACTGAAGATCTGCCAGGCGGGCCTGCTCATCTGTaGGAGCTGAAGGTAGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CHPYSGISIFPMTEDLPGGPAHL*ELKVGY Trigger: ATAGCCTACCTTCAGCTCGCACAGATGAGCAGGCCC...GCCTGGCAGATCTTCAGTCATTGGGAAGATGGAGATACCACTGTAGGGGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | TGTCACCCCTACAGTGGTATCTCCATCTTCCCAATGACTGAAGATCTGCCAGGCGCTATCCTGGAGACCTaGTGCAAGTCAGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CHPYSGISIFPMTEDLPGAILET*CKSEKG Trigger: CCCCTTCTCTGACTTGCAGCAGGTCTCCAGGATAGC...GCCTGGCAGATCTTCAGTCATTGGGAAGATGGAGATACCACTGTAGGGGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGTGTAACAGCTGGAGCTGCTaGAAGTCAGAGAAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WPQIALPQSIEAQQAPLCNSWSC*KSEKGI Trigger: TATCCCCTTCTCTGACTTGCAGCAGCTCCAGCTGTT...ACACAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| 3UTR CAA 72 bp | CCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTaGTTCTTTCCCTCCACATTCTTCTCCGTGATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLSPHLLRPPA*FFPSTFFSVIS Trigger: ACTAATCACGGAGAAGAATGTGGAGGGAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGCTGGCCAGCACTTGGTaGGGCTGGCTGGTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSELASTW*GWLVRD Trigger: ATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAG...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCTCACTGGCCAGCACTTaGTGGGGCTGGCTGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSTFFSVISSRLGTVESSLAST*WGWLVR Trigger: TCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGA...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCTGCTGTTCCATGCCCTaGGAGTCTGCGGCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: FPSTFFSVISSRLGTVESCCSMP*ESAADT Trigger: TGTGTCTGCCGCAGACTCCCAGGGCATGGAACAGCA...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGTGTACTGGGAATGAGATGTaGAATGAAACAGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPQIALPQSIEAQQAPLCTGNEM*NETAGA Trigger: AGCTCCAGCTGTTTCATTCCACATCTCATTCCCAGT...ACACAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGCTGTCTTGGCAAGGATaGAGGAAAGCAGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSELSWQG*RKAGPA Trigger: AGCAGGCCCTGCTTTCCTCCATCCTTGCCAAGACAG...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGCTGGCTGGTGAGAGATaGCAACGGTGGCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSELAGER*QRWQLL Trigger: AAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAG...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | AGGCCCCTCTGTGTTCCTGACAGGGTTCTATTATTTGTTCTTTGTCTTCATTCCGGGCCTGCTCATCTGTaGGAGCTGAAGGTAGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RPLCVPDRVLLFVLCLHSGPAHL*ELKVGY Trigger: ATAGCCTACCTTCAGCTCGCACAGATGAGCAGGCCC...GGAATGAAGACAAAGAACAAATAATAGAACCCTGTCAGGAACACAGAGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGGAGAGATGGCAACGGTaGCAGCTTCTTCCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSEERWQR*QLLPMG Trigger: ACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTC...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGCATACGCAGCTATCCTaGAGACCTGCTGCAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSEHTQLS*RPAASQ Trigger: CTGACTTGCAGCAGGTCTCCAGGATAGCTGCGTATG...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCATCCTGGAGACCTGCTaGAAGTCAGAGAAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FPSTFFSVISSRLGTVESILETC*KSEKGI Trigger: TATCCCCTTCTCTGACTTGCAGCAGGTCTCCAGGAT...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGGCGGATCTGAGAAAGTaGACTATAGGCATACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFFSVISSRLGTVESHSEADLRK*TIGIRS Trigger: GCTGCGTATGCCTATAGTGCACTTTCTCAGATCCGC...CTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | TGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGTGTCTCACTGGCCAGCACTaGGTGGGGCTGGCTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WPQIALPQSIEAQQAPLCLTGQH*VGLAGE Trigger: CTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGAG...ACACAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS CCA 90 bp | TGGGGCTGGCTGGTGAGAGATGGCAACGGTGGCAGCTTCTTCCAATaGGTCAGACTGCTGCTAAGCACAGCCAAGCGGGTACTGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGWLVRDGNGGSFFQ*VRLLLSTAKRVLYC Trigger: GCAGTACAGTACCCGCTTGGCTGTGCTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS CCA 90 bp | ACTGGCCAGCACTTGGTGGGGCTGGCTGGTGAGAGATGGCAACGGTaGCAGCTTCTTCCAATGGGTCAGACTGCTGCTAAGCACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGQHLVGLAGERWQR*QLLPMGQTAAKHSQ Trigger: TTGGCTGTGCTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS CCA 90 bp | GATAGGCTCACTGGCCAGCACTTGGTGGGGCTGGCTGGTGAGAGATaGCAACGGTGGCAGCTTCTTCCAATGGGTCAGACTGCTGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRLTGQHLVGLAGER*QRWQLLPMGQTAAK Trigger: CTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGAGCCTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGCTCCATTGAGGGCTTaGGTAGGGGTGCTACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELATDCSATINRSPAGPSAPLRA*VGVLLG Trigger: CCCCAGTAGCACCCCTACCAAAGCCCTCAATGGAGC...AGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CAA 90 bp | TCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCACAGTGAGGCTGGGGGCTTGGGCTCGGCTCCATaGAGGGCTTTGGTAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVISSRLGTVESHSEAGGLGSAP*RALVGV Trigger: CACCCCTACCAAAGCCCTCAATGGAGCCGAGCCCAA...GCCCCCAGCCTCACTGTGGCTCTCTACAGTACCTAACCTGCTACTAATCACGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS GCA 90 bp | ACAGCCAAGCGGGTACTGTACTGCCTTGCCCGGTCCATGTACTCATaGTGTTCCATGCCCTGGGAGTCTGCGGCAGACACATCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: TAKRVLYCLARSMYS*CSMPWESAADTSMM Trigger: CATCATTGATGTGTCTGCCGCAGACTCCCAGGGCATGGAACAGCATGAGTACATGGACCGGGCAAGGCAGTACAGTACCCGCTTGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCATGTTGCTAGCTGTCTaGGCAAGGATGGAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFMLLAV*ARMEES Trigger: GCTTTCCTCCATCCTTGCCAAGACAGCTAGCAACAT...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCCTCACTGGCCAGCACTaGGTGGGGCTGGCTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSTFFSVISSRLGTVESLTGQH*VGLAGE Trigger: CTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGAG...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTTCCCTTGCTTAGTCCTCACTTGCTCCGGCCTCCAGCCTTGTTCTTTCGACACATCAATGATGTaGCTAGCTGTCTTGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPFPCLVLTCSGLQPCSFDTSMM*LAVLAR Trigger: CCTTGCCAAGACAGCTAGCAACATCATTGATGTGTC...GAAAGAACAAGGCTGGAGGCCGGAGCAAGTGAGGACTAAGCAAGGGAAGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS GCA 90 bp | CTGTACAACCAGCTCTTCTTTCGCATCCACGCGGATCTGAGAAAGTaGACTATAGGCATACGCAGCTATCCTGGAGACCTGCTGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYNQLFFRIHADLRK*TIGIRSYPGDLLQV Trigger: GACTTGCAGCAGGTCTCCAGGATAGCTGCGTATGCCTATAGTGCACTTTCTCAGATCCGCGTGGATGCGAAAGAAGAGCTGGTTGTACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCGCTCCATTGAGGGCTTaGGTAGGGGTGCTACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSTFFSVISSRLGTVESAPLRA*VGVLLG Trigger: CCCCAGTAGCACCCCTACCAAAGCCCTCAATGGAGC...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | AACTGGCCACAGATTGCTCTGCCACAATCAATAGAAGCCCAGCAGGCCCCTCTGGACACATCAATGATGTaGCTAGCTGTCTTGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NWPQIALPQSIEAQQAPLDTSMM*LAVLAR Trigger: CCTTGCCAAGACAGCTAGCAACATCATTGATGTGTC...CAGAGGGGCCTGCTGGGCTTCTATTGATTGTGGCAGAGCAATCTGTGGCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCCCTCTGTGTTCCTGACAGGGTTCTATTATTTGTTCTTTGTCTTCATTCCTTGGGCTCGGCTCCATaGAGGGCTTTGGTAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPLCVPDRVLLFVLCLHSLGSAP*RALVGV Trigger: CACCCCTACCAAAGCCCTCAATGGAGCCGAGCCCAA...GGAATGAAGACAAAGAACAAATAATAGAACCCTGTCAGGAACACAGAGGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCCACATTCTTCTCCGTGATTAGTAGCAGGTTAGGTACTGTAGAGAGCGGGTACTGTACTGCCTaGCCCGGTCCATGTACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPSTFFSVISSRLGTVESGYCTA*PGPCTH Trigger: ATGAGTACATGGACCGGGCAAGGCAGTACAGTACCC...GCTCTCTACAGTACCTAACCTGCTACTAATCACGGAGAAGAATGTGGAGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||
| CDS-3UTR CAA 90 bp | AGGCCCCTCTGTGTTCCTGACAGGGTTCTATTATTTGTTCTTTGTCTTCATTCCGGGTACTGTACTGCCTaGCCCGGTCCATGTACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLCVPDRVLLFVLCLHSGYCTA*PGPCTH Trigger: ATGAGTACATGGACCGGGCAAGGCAGTACAGTACCC...GGAATGAAGACAAAGAACAAATAATAGAACCCTGTCAGGAACACAGAGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193465.2 |
||
| CDS CCA 72 bp | TCAGAGAAGGGGATAGGCTCACTGGCCAGCACTTGGTaGGGCTGGCTGGTGAGAGATGGCAACGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEKGIGSLASTW*GWLVRDGNGGS Trigger: GCTGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGAGCCTATCCCCTTCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS CCA 72 bp | ACTGGCCAGCACTTGGTGGGGCTGGCTGGTGAGAGATaGCAACGGTGGCAGCTTCTTCCAATGGGTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: TGQHLVGLAGER*QRWQLLPMGQT Trigger: AGTCTGACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS GCA 72 bp | TGGCAAGGATGGAGGAAAGCAGGGCCTGCTCATCTGTaGGAGCTGAAGGTAGGCTATGGTAGTTGGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WQGWRKAGPAHL*ELKVGYGSWAR Trigger: CCGAGCCCAACTACCATAGCCTACCTTCAGCTCGCACAGATGAGCAGGCCCTGCTTTCCTCCATCCTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS CCA 72 bp | CTGGTGAGAGATGGCAACGGTGGCAGCTTCTTCCAATaGGTCAGACTGCTGCTAAGCACAGCCAAGCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVRDGNGGSFFQ*VRLLLSTAKRV Trigger: TACCCGCTTGGCTGTGCTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCCACCGTTGCCATCTCTCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033131.12 ENSMUST00000193465.2 |
||
| CDS GCA 72 bp | CAGCTCTTCTTTCGCATCCACGCGGATCTGAGAAAGTaGACTATAGGCATACGCAGCTATCCTGGAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLFFRIHADLRK*TIGIRSYPGDL Trigger: CAGGTCTCCAGGATAGCTGCGTATGCCTATAGTGCACTTTCTCAGATCCGCGTGGATGCGAAAGAAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033131.12 |
||