Pregenerated sensors for LAMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016534Ensembl transcript IDs: ENSMUST00000016678.14, ENSMUST00000061755.9, ENSMUST00000074913.12
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTaGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGG | + |
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Preference number: 1 (lower is better) Translates to: STHAQASLQLTEVSL*IRFIAQQFLAFGQW Trigger: CCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR TCA 90 bp | CCATTTTTAAAGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTaGAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PFLKFYSCPSQLATH*SQSVDPIYRTAIPG Trigger: GCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACTTTAAAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR GCA 90 bp | CAAGTACAAATCCACTGGAAATCAGGATGGCCAAACTCAATTTCATaGAGGCAGAAGAAACCGGCTTTTTCCTACACTGGACGTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: QVQIHWKSGWPNSIS*RQKKPAFSYTGRSH Trigger: ATGAGAACGTCCAGTGTAGGAAAAAGCCGGTTTCTTCTGCCTGCATGAAATTGAGTTTGGCCATCCTGATTTCCAGTGGATTTGTACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR TCA 90 bp | TTTACTGGCAAGAGCATGGTACCTCTGGGCTCTGTTCAAATCTACTaGTACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: FTGKSMVPLGSVQIY*YLFHRSNMEQGRSS Trigger: GCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGTAGATTTGAACAGAGCCCAGAGGTACCATGCTCTTGCCAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 90 bp | GCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAGAAATCTaGATTAATCTTAGTGCTGCATGTAGAGGCCAATTTCTGGGTACA | + |
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Preference number: 1 (lower is better) Translates to: AHYHQQGRLEGSREI*INLSAACRGQFLGT Trigger: TGTACCCAGAAATTGGCCTCTACATGCAGCACTAAGATTAATGCAGATTTCTCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR CCA 90 bp | AAACTCAATTTCATGCAGGCAGAAGAAACCGGCTTTTTCCTACACTaGACGTTCTCATTCAGAAATTCCAGACCAGTGAAACAGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: KLNFMQAEETGFFLH*TFSFRNSRPVKQNQ Trigger: CTGGTTCTGTTTCACTGGTCTGGAATTTCTGAATGAGAACGTCCAGTGTAGGAAAAAGCCGGTTTCTTCTGCCTGCATGAAATTGAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR CCA 90 bp | CATGTAGAGGCCAATTTCTGGGTACAAAGCACTAATGCCTTCATTTaGCACTGCCTAGCAATTATCTCTAAAGCACCTAAAACCAGATTG | + |
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Preference number: 1 (lower is better) Translates to: HVEANFWVQSTNAFI*HCLAIISKAPKTRL Trigger: CAATCTGGTTTTAGGTGCTTTAGAGATAATTGCTAGGCAGTGCCAAATGAAGGCATTAGTGCTTTGTACCCAGAAATTGGCCTCTACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 90 bp | GACCATGTTAATGGACTAAGGCAAGACCATGACTTTTGGATTAGGTaGAAGCAATTTTATGAGCATAAGTGCACTTCGTTACCTAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: DHVNGLRQDHDFWIR*KQFYEHKCTSLPRF Trigger: GAACCTAGGTAACGAAGTGCACTTATGCTCATAAAATTGCTTGCACCTAATCCAAAAGTCATGGTCTTGCCTTAGTCCATTAACATGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCGCAATTCCTGGCTTTTaGCCAATGGAAGCACGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SSTHAQASLQLTEVSLWIAIPGF*PMEARD Trigger: GTCTCGTGCTTCCATTGGCCAAAAGCCAGGAATTGC...GATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCTCGCACAGCAATTCCTaGCTTTTGGCCAATGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSTHAQASLQLTEVSLWISHSNS*LLANGS Trigger: GCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGA...GATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAGTAGAGGCCAATTTCTaGGTACAAAGCACTAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEVEANF*VQSTNA Trigger: GGCATTAGTGCTTTGTACCCAGAAATTGGCCTCTAC...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAACACCTAAAACCAGATTaGAATGCCCAGTTGGAATTG | + |
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Preference number: 2 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEHLKPD*NAQLEL Trigger: CAATTCCAACTGGGCATTTCAATCTGGTTTTAGGTG...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATGACAACAAGTTAAAGTaGCACAATCTCTGCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDDNKLK*HNLCHS Trigger: GGAGTGGCAGAGATTGTGTCACTTTAACTTGTTGTC...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAATTGAAATGCCCAGTTaGAATTGCCTTGTGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEIEMPS*NCLVSC Trigger: GCAAGACACAAGGCAATTCCAACTGGGCATTTCAAT...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATCAAGTACAAATCCACTaGAAATCAGGATGGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDQVQIH*KSGWPN Trigger: GTTTGGCCATCCTGATTTCCAGTGGATTTGTACTTG...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAATTCATAGGTCAAATATaGAACAAGGCCGAAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEFIGQI*NKAEVA Trigger: AGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATATGCCCAGTTGGAATTaGCTTGTGTCTTGCAATTTA | + |
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Preference number: 2 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDMPSWN*LVSCNL Trigger: TAAATTGCAAGACACAAGGCAATTCCAACTGGGCAT...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAATAAGCAGTAGGTGGTaGATAGTAAATGAACAATTG | + |
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Preference number: 2 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEISSRW*IVNEQL Trigger: CAATTGTTCATTTACTATGCACCACCTACTGCTTAT...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATCAAGACCATGACTTTTaGATTAGGTGCAAGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDQDHDF*IRCKQF Trigger: AAATTGCTTGCACCTAATCCAAAAGTCATGGTCTTG...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATGACTTTTGGATTAGGTaGAAGCAATTTTATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDDFWIR*KQFYEH Trigger: ATGCTCATAAAATTGCTTGCACCTAATCCAAAAGTC...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | TTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAACCTGCAAACAACACTGGAAATCAGGATaGCCAAACTCAATTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: FIGQIWNKAEVAKSTCKQHWKSG*PNSISC Trigger: GCATGAAATTGAGTTTGGCCATCCTGATTTCCAGTG...TTGTTTGCAGGTTGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAAAAACCAGATTGAAATaGCCAGTTGGAATTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRKTRLK*PVGIAL Trigger: CAAGGCAATTCCAACTGGGCATTTCAATCTGGTTTT...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAGCCTTCATTTGGCACTaGCTAGCAATTATCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRAFIWH*LAIISK Trigger: TTTAGAGATAATTGCTAGGCAGTGCCAAATGAAGGC...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAACTTTAAGTTGGCCATaGAGTTCCCTGTTGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKTLSWP*SSLLLQ Trigger: CTGGAGCAACAGGGAACTGCATGGCCAACTTAAAGT...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR TCA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCAAGTGCTTCATACACTaGCAGGTAAGACAACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VMLISLRHLRLGSQFGQSKCFIH*QVRQLC Trigger: ACAAAGTTGTCTTACCTGTCAGTGTATGAAGCACTT...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAACAGCATTAAGCCAGTaGCACCCACTTGTTCCAATT | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKTALSQ*HPLVPI Trigger: AATTGGAACAAGTGGGTGGCACTGGCTTAATGCTGT...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR TCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTGGACTAATTTCCGAATaGAAGTTCCAAGGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QFGQSFLRQTLKHCICVFGLISE*KFQGVC Trigger: ACAGACACCTTGGAACTTTCATTCGGAAATTAGTCC...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
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| 3UTR-3UTR TCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGTGGTGCATAGTAAATaGACAATTGGTGCCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKVVHSK*TIGAIS Trigger: AGAGATGGCACCAATTGTTCATTTACTATGCACCAC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAACCTGCAAACAATTCAATAGTATTGCATaGGAGAACTTGTACTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FIGQIWNKAEVAKSTCKQFNSIA*ENLYLL Trigger: AAGCAAGTACAAGTTCTCGCATGCAATACTATTGAA...TTGTTTGCAGGTTGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGTAGCTAAGTCAACCTaGAAACAAAAGTCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKVAKST*KQKSQA Trigger: TGCTTGTGACTTTTGTTTGCAGGTTGACTTAGCTAC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR CAA 90 bp | TTCTCATTCAGAAATTCCAGACCAGTGAAACAGAACCAGATAATTTaGTACATGCCTTTTGCCATAGTAATTTTAAACTCCTTAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSFRNSRPVKQNQII*YMPFAIVILNSLVR Trigger: CCTGACTAAGGAGTTTAAAATTACTATGGCAAAAGGCATGTACAAAATTATCTGGTTCTGTTTCACTGGTCTGGAATTTCTGAATGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGGTTCAAGAGAAATCTaGATTAATCTTAGTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKGSREI*INLSAA Trigger: TGCAGCACTAAGATTAATGCAGATTTCTCTTGAACC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAATTAAGAAATATGTGCTaGGCCATACCAGTATGTACA | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKLRNMC*AIPVCT Trigger: TGTACATACTGGTATGGCCCAGCACATATTTCTTAA...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAATGCTAACATGCAAGTaGCTATATGTGTGCATATAT | + |
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Preference number: 2 (lower is better) Translates to: KISHTRQSILPSRSKTSKMLTCK*LYVCIY Trigger: ATATATGCACACATATAGGCACTTGCATGTTAGCAT...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR TCA 72 bp | AAGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTaGAGTCAGTCTGTGGATCCGATTTATCGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: KFYSCPSQLATH*SQSVDPIYRTA Trigger: TGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAGCACCTAAAACCAGATaGAAATGCCCAGTTGGAATT | + |
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Preference number: 3 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEAPKTR*KCPVGI Trigger: AATTCCAACTGGGCATTTCAATCTGGTTTTAGGTGC...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 72 bp | ATCCACTGGAAATCAGGATGGCCAAACTCAATTTCATaGAGGCAGAAGAAACCGGCTTTTTCCTACACTGGA | + |
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Preference number: 3 (lower is better) Translates to: IHWKSGWPNSIS*RQKKPAFSYTG Trigger: TCCAGTGTAGGAAAAAGCCGGTTTCTTCTGCCTGCATGAAATTGAGTTTGGCCATCCTGATTTCCAGTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR CCA 72 bp | TTCATGCAGGCAGAAGAAACCGGCTTTTTCCTACACTaGACGTTCTCATTCAGAAATTCCAGACCAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: FMQAEETGFFLH*TFSFRNSRPVK Trigger: TTTCACTGGTCTGGAATTTCTGAATGAGAACGTCCAGTGTAGGAAAAAGCCGGTTTCTTCTGCCTGCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAACCATGCAGTTCCCTGTaGCTCCAGAAGACAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: KISHTRQSILPSRSKTSKPCSSL*LQKTVR Trigger: CCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGG...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 72 bp | TCTGGTTCATTTATAACAAGTACTTTAAGTTGGCCATaGAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SGSFITSTLSWP*SSLLLQKTVRS Trigger: ACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAAGTACTTGTTATAAATGAACCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 72 bp | TCCATTTTTAAAGTTCTACTCATGCCCAAGCCAGCTTaGAACTCACTGAAGTCAGTCTGTGGATCCGATTTA | + |
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Preference number: 3 (lower is better) Translates to: SIFKVLLMPKPA*NSLKSVCGSDL Trigger: TAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACTTTAAAAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR CCA 72 bp | GCCAATTTCTGGGTACAAAGCACTAATGCCTTCATTTaGCACTGCCTAGCAATTATCTCTAAAGCACCTAAA | + |
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Preference number: 3 (lower is better) Translates to: ANFWVQSTNAFI*HCLAIISKAPK Trigger: TTTAGGTGCTTTAGAGATAATTGCTAGGCAGTGCCAAATGAAGGCATTAGTGCTTTGTACCCAGAAATTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR CCA 72 bp | TGGAACCCAGAACTTCATATATGCATGCAGTATCACTaGGTTACATCCCAGACCTCTTTTTATTTTTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: WNPELHICMQYH*VTSQTSFYFWL Trigger: CAACCAAAAATAAAAAGAGGTCTGGGATGTAACCCAGTGATACTGCATGCATATATGAAGTTCTGGGTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| 3UTR-3UTR CAA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGTACCTTCAATAGTATaGCATGCGAGAACTTGTACT | + |
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Preference number: 3 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSVPSIV*HARTCT Trigger: AGTACAAGTTCTCGCATGCAATACTATTGAAGGTAC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR-3UTR CAA 90 bp | TTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAACCTGCAAACAACAGAACCAGATAATTTaGTACATGCCTTTTGCCATA | + |
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Preference number: 3 (lower is better) Translates to: FIGQIWNKAEVAKSTCKQQNQII*YMPFAI Trigger: TATGGCAAAAGGCATGTACAAAATTATCTGGTTCTG...TTGTTTGCAGGTTGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR TCA 72 bp | TGTATGGAAGATGTCCTAGAAGCTGCAAGGAATACATaGTGTGTTAAGTATCGGGCTGAAAGAGTTATTAGT | + |
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Preference number: 3 (lower is better) Translates to: CMEDVLEAARNT*CVKYRAERVIS Trigger: ACTAATAACTCTTTCAGCCCGATACTTAACACATCATGTATTCCTTGCAGCTTCTAGGACATCTTCCATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| 3UTR GCA 72 bp | ACCTTCTATATATGGCTGCAGAGCTTAAGAAATATGTaGTGGGCCATACCAGTATGTACACATGTATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TFYIWLQSLRNM*WAIPVCTHVYV Trigger: TACATATACATGTGTACATACTGGTATGGCCCAGCACATATTTCTTAAGCTCTGCAGCCATATATAGAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| 3UTR CCA 72 bp | TTCTATATATGGCTGCAGAGCTTAAGAAATATGTGCTaGGCCATACCAGTATGTACACATGTATATGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: FYIWLQSLRNMC*AIPVCTHVYVC Trigger: ACATACATATACATGTGTACATACTGGTATGGCCCAGCACATATTTCTTAAGCTCTGCAGCCATATATAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGGGCAGTGGTGTGAATaGTGGGTGCCACAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMGQWCE*WVPQWW Trigger: CCACCACTGTGGCACCCATCATTCACACCACTGCCC...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | TTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGACGGGGCAGTGGTGTaGATGATGGGTGCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQLTEVSLWIRFIAQQFLDGAVV*MMGATV Trigger: CACTGTGGCACCCATCATTCACACCACTGCCCCGTC...CAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGTTGACAGCTGCCGGTaGAGTTGGTTGTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMVDSCR*SWLWQG Trigger: ACCCTGCCACAACCAACTTCACCGGCAGCTGTCAAC...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | ACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTTCAGTGATGTTCAGCTaGAGCCCCATGGTAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THAQASLQLTEVSLWIRFSVMFS*SPMVAS Trigger: GCTGGCTACCATGGGGCTGCAGCTGAACATCACTGA...AAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | ACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTGGTGTGAATGATGGGTaGCACAGTGGTGGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: THAQASLQLTEVSLWIRFGVNDG*HSGGSL Trigger: CAAACTCCCACCACTGTGGCACCCATCATTCACACC...AAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CCA 90 bp | TTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAGCACGAGACTGGCTTGTCCAACGGTTGGAGTTaGAGTTGGAGTTGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIAQQFLAFGQWKHETGLSNGWS*SWSWSG Trigger: CCCACTCCAACTCCAACTCCAACTCCAACCGTTGGA...CAAGCCAGTCTCGTGCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTGGGCAGTGGTGTGAATaGTGGGTGCCACAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTGQWCE*WVPQWW Trigger: CCACCACTGTGGCACCCATCATTCACACCACTGCCC...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCGACGGGGCAGTGGTGTaGATGATGGGTGCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTDGAVV*MMGATV Trigger: CACTGTGGCACCCATCATTCACACCACTGCCCCGTC...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGTCATCCCCACAACTaGTTCCATCGTGTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANGHPHN*FHRVSP Trigger: AGGCGACACACGATGGAAGCAGTTGTGGGGATGACC...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTTACTCCTCCCAGAGCTaGTCCCACCGCTATGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTYSSQS*SHRYGH Trigger: GTGCCCATAGCGGTGGGAGCAGCTCTGGGAGGAGTA...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGTGGGTGCCACAGTGGTaGGAGTTTGGTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMWVPQW*EFGLLH Trigger: GTGAAGAAGACCAAACTCCCACCACTGTGGCACCCA...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | AGTTCCAAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGGGTCATCCCCACAACTaGTTCCATCGTGTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKVSVLRSKVLHTLTGKGHPHN*FHRVSP Trigger: AGGCGACACACGATGGAAGCAGTTGTGGGGATGACC...CTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAATCCAGCGAACACTCCTaGGCTGTAGAATACTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAMQFPVAPEDSQEYDSESSEHS*AVEYCP Trigger: AGGACAGTATTCTACAGCCCAGGAGTGTTCGCTGGA...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGGGCAGTGGTGTGAATaGTGGGTGCCACAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSGQWCE*WVPQWW Trigger: CCACCACTGTGGCACCCATCATTCACACCACTGCCC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGACGGGGCAGTGGTGTaGATGATGGGTGCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSDGAVV*MMGATV Trigger: CACTGTGGCACCCATCATTCACACCACTGCCCCGTC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTTCAGTGATGTTCAGCTaGAGCCCCATGGTAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTSVMFS*SPMVAS Trigger: GCTGGCTACCATGGGGCTGCAGCTGAACATCACTGA...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | TTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGATCAATGCATTGGACTaGACGGCTCCTAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLTEVSLWIRFIAQQFLINALD*TAPRNR Trigger: TCTGTTCCTAGGAGCCGTTCAGTCCAATGCATTGAT...CAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGATACCCCAATATTTCTaGACGACAGGAGTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMIPQYF*TTGVRL Trigger: CAACCTGACTCCTGTCGTTCAGAAATATTGGGGTAT...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCGGTGTGAATGATGGGTaGCACAGTGGTGGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTGVNDG*HSGGSL Trigger: CAAACTCCCACCACTGTGGCACCCATCATTCACACC...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | ACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTGCACCTGCTCTTTGTTaGACATATAAGAACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: THAQASLQLTEVSLWIRFAPALC*TYKNFP Trigger: TGGGAAGTTCTTATATGTGCAACAAAGAGCAGGTGC...AAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAACAGTGGTGGGAGTTTaGTCTTCTTCACACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAMQFPVAPEDSQEYDSETVVGV*SSSHTC Trigger: ACAAGTGTGTGAAGAAGACCAAACTCCCACCACTGT...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTGGGTGCCACAGTGGTaGGAGTTTGGTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTWVPQW*EFGLLH Trigger: GTGAAGAAGACCAAACTCCCACCACTGTGGCACCCA...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTTCCAACGGTTGGAGTTaGAGTTGGAGTTGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTSNGWS*SWSWSG Trigger: CCCACTCCAACTCCAACTCCAACTCCAACCGTTGGA...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTCTGCTCCCACCGCTATaGGCACAAGGAAGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTLLPPL*AQGSCL Trigger: AAGACAACTTCCTTGTGCCCATAGCGGTGGGAGCAG...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATATACCCCAATATTTCTaGACGACAGGAGTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDIPQYF*TTGVRL Trigger: CAACCTGACTCCTGTCGTTCAGAAATATTGGGGTAT...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTGACAGCTGCCGGTaGAGTTGGTTGTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPIWPKLLKTDLKTLHMCVDSCR*SWLWQG Trigger: ACCCTGCCACAACCAACTTCACCGGCAGCTGTCAAC...ACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATCAAGGCCACACCCACTaGAACAGGAATAAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANQGHTH*NRNKKV Trigger: AACTTTCTTATTCCTGTTGCAGTGGGTGTGGCCTTG...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGATCCAACGGTTGGAGTTaGAGTTGGAGTTGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRSNGWS*SWSWSG Trigger: CCCACTCCAACTCCAACTCCAACTCCAACCGTTGGA...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGTTGACAGCTGCCGGTaGAGTTGGTTGTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KISHTRQSILPSRSKTSKVDSCR*SWLWQG Trigger: ACCCTGCCACAACCAACTTCACCGGCAGCTGTCAAC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTCTGCACTGCAGTCTTaGGCTGTAGAATACTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTSALQS*AVEYCP Trigger: AGGACAGTATTCTACAGCTCAAGACTGCAGTGCAGA...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATAACGATAATCAAGCCTaGAAGACCAGCACCAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDNDNQA*KTSTNY Trigger: ATAGTTGGTGCTGGTCTTTCAGGCTTGATTATCGTT...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCTGAAATTCATCTCCCATTCTaGATAAAGGCAAGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAMQFPVAPEDSQEYDSEIHLPF*IKASTL Trigger: AAGGGTACTTGCCTTTATGCAGAATGGGAGATGAAT...TTCAGAATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGGTGTGAATGATGGGTaGCACAGTGGTGGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSGVNDG*HSGGSL Trigger: CAAACTCCCACCACTGTGGCACCCATCATTCACACC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | TTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAGCACGAGACTGGCTTGGTCACATTAAAAGGTTaGACCTTTAGGTTAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIAQQFLAFGQWKHETGLVTLKG*TFRLKV Trigger: CACCTTTAACCTAAAGGTGCAACCTTTTAATGTGAC...CAAGCCAGTCTCGTGCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAGTGGTGGGAGTTTaGTCTTCTTCACACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKVSVLRSKVLHTLTGKTVVGV*SSSHTC Trigger: ACAAGTGTGTGAAGAAGACCAAACTCCCACCACTGT...CTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTTGGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAATCAATGCATTGGACTaGACGGCTCCTAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRINALD*TAPRNR Trigger: TCTGTTCCTAGGAGCCGTTCAGTCCAATGCATTGAT...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTATACCCCAATATTTCTaGACGACAGGAGTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTIPQYF*TTGVRL Trigger: CAACCTGACTCCTGTCGTTCAGAAATATTGGGGTAT...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAATGTTGAAAGCTaGGCCATTAGCCAAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANGNVES*AISQIH Trigger: ATGTATTTGGCTAATGGCTCAGCTTTCAACATTTCC...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATTTAAAGGTGTTGATCTaGAACGCTCTAGACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANLKVLI*NALDTE Trigger: TTCTGTGTCTAGAGCGTTTCAGATCAACACCTTTAA...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATATTCATCTCCCATTCTaGATAAAGGCAAGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANIHLPF*IKASTL Trigger: AAGGGTACTTGCCTTTATGCAGAATGGGAGATGAAT...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGGTCATCCCCACAACTaGTTCCATCGTGTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KISHTRQSILPSRSKTSKGHPHN*FHRVSP Trigger: AGGCGACACACGATGGAAGCAGTTGTGGGGATGACC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAATCAGTGATGTTCAGCTaGAGCCCCATGGTAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KISHTRQSILPSRSKTSKSVMFS*SPMVAS Trigger: GCTGGCTACCATGGGGCTGCAGCTGAACATCACTGA...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAATGGGTGCCACAGTGGTaGGAGTTTGGTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KISHTRQSILPSRSKTSKWVPQW*EFGLLH Trigger: GTGAAGAAGACCAAACTCCCACCACTGTGGCACCCA...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATAAAGATGACATCCAATaGAACTTTGAAATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDKDDIQ*NFEILR Trigger: CCTGAGAATTTCAAAGTTCCATTGGATGTCATCTTT...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CCA 90 bp | TTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGAAAGATGACATCCAATaGAACTTTGAAATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLTEVSLWIRFIAQQFLKDDIQ*NFEILR Trigger: CCTGAGAATTTCAAAGTTCCATTGGATGTCATCTTT...CAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTCAAGATACTTAATTTaGCTGTTGTTCAGCCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDSRYLI*LLFSLS Trigger: ACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGA...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATTCAAGATACTTAATTTaGCTGTTGTTCAGCCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSVCGSDLSHSNSWLLANSRYLI*LLFSLS Trigger: ACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGA...ATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR TCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTATCAATGCATTGGACTaGACGGCTCCTAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFGQSFLRQTLKHCICVFINALD*TAPRNR Trigger: TCTGTTCCTAGGAGCCGTTCAGTCCAATGCATTGAT...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCCACGATGTCATGAATTaGATAATGAGATGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTHDVMN*IMRCFL Trigger: AAGGAAGCATCTCATTATTCAATTCATGACATCGTG...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGATTAAAGGTGTTGATCTaGAACGCTCTAGACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRLKVLI*NALDTE Trigger: TTCTGTGTCTAGAGCGTTTCAGATCAACACCTTTAA...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGCACCTGCTCTTTGTTaGACATATAAGAACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSAPALC*TYKNFP Trigger: TGGGAAGTTCTTATATGTGCAACAAAGAGCAGGTGC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCGTCACATTAAAAGGTTaGACCTTTAGGTTAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTVTLKG*TFRLKV Trigger: CACCTTTAACCTAAAGGTGCAACCTTTTAATGTGAC...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCGGAAATGTTGAAAGCTaGGCCATTAGCCAAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VMLISLRHLRLGSQFGQSGNVES*AISQIH Trigger: ATGTATTTGGCTAATGGCTCAGCTTTCAACATTTCC...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGGAAATGTTGAAAGCTaGGCCATTAGCCAAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSGNVES*AISQIH Trigger: ATGTATTTGGCTAATGGCTCAGCTTTCAACATTTCC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTTGCTCATATCCAGTATaGTGGCGCTTGAGACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: QFGQSFLRQTLKHCICVFCSYPV*WRLRPI Trigger: TATTGGTCTCAAGCGCCATCATACTGGATATGAGCA...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAGTCACATTAAAAGGTTaGACCTTTAGGTTAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRVTLKG*TFRLKV Trigger: CACCTTTAACCTAAAGGTGCAACCTTTTAATGTGAC...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGACATAGGTCTTTCTTCTaGCAATTAGGTAAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRHRSFF*QLGKQS Trigger: TGATTGCTTACCTAATTGGCAGAAGAAAGACCTATG...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR TCA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCACACGATGTCATGAATTaGATAATGAGATGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSHDVMN*IMRCFL Trigger: AAGGAAGCATCTCATTATTCAATTCATGACATCGTG...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR GCA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCCGCCTTGTCAGGTACTaGAATGGTTATAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VMLISLRHLRLGSQFGQSRLVRY*NGYSFI Trigger: AATAAAACTATAACCATTGCAGTACCTGACAAGGCG...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTGCACCTGCTCTTTGTTaGACATATAAGAACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFGQSFLRQTLKHCICVFAPALC*TYKNFP Trigger: TGGGAAGTTCTTATATGTGCAACAAAGAGCAGGTGC...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR TCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTTTAAAGGTGTTGATCTaGAACGCTCTAGACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFGQSFLRQTLKHCICVFLKVLI*NALDTE Trigger: TTCTGTGTCTAGAGCGTTTCAGATCAACACCTTTAA...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTATTCATCTCCCATTCTaGATAAAGGCAAGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFGQSFLRQTLKHCICVFIHLPF*IKASTL Trigger: AAGGGTACTTGCCTTTATGCAGAATGGGAGATGAAT...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCAAAGATGACATCCAATaGAACTTTGAAATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMLISLRHLRLGSQFGQSKDDIQ*NFEILR Trigger: CCTGAGAATTTCAAAGTTCCATTGGATGTCATCTTT...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CCA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTCAAGATACTTAATTTaGCTGTTGTTCAGCCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VMLISLRHLRLGSQFGQSSRYLI*LLFSLS Trigger: ACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGA...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR GCA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAACGCCTTGTCAGGTACTaGAATGGTTATAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KISHTRQSILPSRSKTSKRLVRY*NGYSFI Trigger: AATAAAACTATAACCATTGCAGTACCTGACAAGGCG...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| CDS-3UTR CAA 90 bp | AGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGGTTGGAGTTGGAGTaGGAGTTGGAGTGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTHAQASLQLTEVSLWIRLELE*ELEWVL Trigger: CAACACCCACTCCAACTCCAACTCCAACTCCAACCG...GATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | CTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAGCACCACAGTGGTGGGAGTTaGGTCTTCTTCACACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWIRFIAQQFLAFGQWKHHSGGS*VFFTHL Trigger: CAAGTGTGTGAAGAAGACCAAACTCCCACCACTGTG...GTGCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | CTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAGCACTGTAGTTTCCAACGGTaGGAGTTGGAGTTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWIRFIAQQFLAFGQWKHCSFQR*ELELEL Trigger: CAACTCCAACTCCAACTCCAACCGTTGGAAACTACA...GTGCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | TTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGCCTAAGTTGAGCACTTaGAGGTTGACAGCTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLTEVSLWIRFIAQQFLPKLST*RLTAAG Trigger: ACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGG...CAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | ACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTACTCACTGTACCATTTaGGACAAAAGCTTGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: THAQASLQLTEVSLWIRFTHCTI*DKSLQV Trigger: CACCTGCAAGCTTTTGTCCAAAATGGTACAGTGAGT...AAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | AAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGACAACTCGGTTGGAGTTGGAGTaGGAGTTGGAGTGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVSVLRSKVLHTLTGKTTRLELE*ELEWVL Trigger: CAACACCCACTCCAACTCCAACTCCAACTCCAACCG...AGTTGTCTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
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| CDS-3UTR CAA 90 bp | AGTTCCAAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGCCTAAGTTGAGCACTTaGAGGTTGACAGCTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSKVSVLRSKVLHTLTGKPKLST*RLTAAG Trigger: ACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGG...CTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTTGGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | AGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCGTTGTTCAGCCTAAGTaGAGCACTTTGAGGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSTHAQASLQLTEVSLWIVVQPK*STLRLT Trigger: TGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAAC...GATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATTGTAGTTTCCAACGGTaGGAGTTGGAGTTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDCSFQR*ELELEL Trigger: CAACTCCAACTCCAACTCCAACCGTTGGAAACTACA...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCTACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCTTGGTTGTGGCAGGGTaGATGTTAAAAATGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTHAQASLQLTEVSLWILVVAG*MLKMKG Trigger: GCCTTTCATTTTTAACATCAACCCTGCCACAACCAA...GATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGTAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS CCA 90 bp | AATTCACAGCCCAAGAGACAGCGAATCCAAATTGTATCATTATTTTaGCACTATTCCGGTCATCCCCACAACTGCTTCCATCGTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NSQPKRQRIQIVSLF*HYSGHPHNCFHRVS Trigger: CGACACACGATGGAAGCAGTTGTGGGGATGACCGGAATAGTGCCAAAATAATGATACAATTTGGATTCGCTGTCTCTTGGGCTGTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCCACAGTGGTGGGAGTTaGGTCTTCTTCACACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTHSGGS*VFFTHL Trigger: CAAGTGTGTGAAGAAGACCAAACTCCCACCACTGTG...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | ACTGGTCCTAATCCATTTTTAAAGTTCTACTCATGCCCAAGCCAGCTTGCAACTGAGTTGGAGTTGGAGTaGGAGTGGGTGTTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGPNPFLKFYSCPSQLATELELE*EWVLKL Trigger: CAACTTCAACACCCACTCCAACTCCAACTCCAACTC...AGTTGCAAGCTGGCTTGGGCATGAGTAGAACTTTAAAAATGGATTAGGACCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | ACTGGTCCTAATCCATTTTTAAAGTTCTACTCATGCCCAAGCCAGCTTGCAACTTTGAGCACTTTGAGGTaGACAGCTGCCGGTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TGPNPFLKFYSCPSQLATLSTLR*TAAGEV Trigger: AACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAA...AGTTGCAAGCTGGCTTGGGCATGAGTAGAACTTTAAAAATGGATTAGGACCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTTAAGTTGGCCATGCAGTTCCCTGTTGCTCCAGAAGACAGTCAGGAGTATGATGTTGTTCAGCCTAAGTaGAGCACTTTGAGGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FKLAMQFPVAPEDSQEYDVVQPK*STLRLT Trigger: TGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAAC...ATCATACTCCTGACTGTCTTCTGGAGCAACAGGGAACTGCATGGCCAACTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | CTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGAAGCACAAGCTAAGGTTCTTGTaGGAAATGTTGAAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWIRFIAQQFLAFGQWKHKLRFL*EMLKAE Trigger: CTCAGCTTTCAACATTTCCAACAAGAACCTTAGCTT...GTGCTTCCATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | ACTCATGCCCAAGCCAGCTTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTCAGAAGCTAAGGTTCTaGTTGGAAATGTTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: THAQASLQLTEVSLWIRFQKLRF*LEMLKA Trigger: AGCTTTCAACATTTCCAACAAGAACCTTAGCTTCTG...AAATCGGATCCACAGACTGACTTCAGTGAGTTGCAAGCTGGCTTGGGCATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCATGGGCACAAGGAAGTaGTCTTCATCTGCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTMGTRK*SSSALQ Trigger: CTGCAGTGCAGATGAAGACAACTTCCTTGTGCCCAT...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS GCA 90 bp | AGATATAAACACAGCAATTATAAGGAAGCCCAAGGCCACACCCACTaGAACAGGAATAAGAAAGTTGAGGTCAGAGTCAGCAGCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RYKHSNYKEAQGHTH*NRNKKVEVRVSSTF Trigger: GAATGTGCTGCTGACTCTGACCTCAACTTTCTTATTCCTGTTGCAGTGGGTGTGGCCTTGGGCTTCCTTATAATTGCTGTGTTTATATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAGAGTTGGAGTTGGAGTaGGAGTGGGTGTTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRELELE*EWVLKL Trigger: CAACTTCAACACCCACTCCAACTCCAACTCCAACTC...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGTCAAGATACTTAATTaGGCTGTTGTTCAGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMVKILN*AVVQPK Trigger: CTTAGGCTGAACAACAGCCAAATTAAGTATCTTGAC...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTGCAACTCACTGAAGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGTTCTTGTTGGAAATGTaGAAAGCTGAGCCATTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLTEVSLWIRFIAQQFLFLLEM*KAEPLA Trigger: GGCTAATGGCTCAGCTTTCAACATTTCCAACAAGAA...CAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACTTCAGTGAGTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | AGTCAGTCTGTGGATCCGATTTATCGCACAGCAATTCCTGGCTTTTGGCCAATGGACAGCGAATCCAAATaGTATCATTATTTTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SQSVDPIYRTAIPGFWPMDSESK*YHYFGT Trigger: AGTGCCAAAATAATGATACAATTTGGATTCGCTGTC...CATTGGCCAAAAGCCAGGAATTGCTGTGCGATAAATCGGATCCACAGACTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAACGGTTGGAGTTGGAGTaGGAGTTGGAGTGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKRLELE*ELEWVL Trigger: CAACACCCACTCCAACTCCAACTCCAACTCCAACCG...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTGAGCACTTTGAGGTaGACAGCTGCCGGTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VMLISLRHLRLGSQFGQSLSTLR*TAAGEV Trigger: AACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAA...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCGTTGTTCAGCCTAAGTaGAGCACTTTGAGGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTVVQPK*STLRLT Trigger: TGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAAC...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS GCA 90 bp | GTCATCCCCACAACTGCTTCCATCGTGTGTCGCCTTGTCAGGTACTaGAATGGTTATAGTTTTATTGGTTTGGTTTGTAGTTTCATATGT | + |
|
Preference number: 5 (lower is better) Translates to: VIPTTASIVCRLVRY*NGYSFIGLVCSFIC Trigger: ACATATGAAACTACAAACCAAACCAATAAAACTATAACCATTGCAGTACCTGACAAGGCGACACACGATGGAAGCAGTTGTGGGGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAAGGTGTCTGTCTTAAGGAGCAAAGTGCTTCATACACTGACAGGTAAGGCACGATGTCATGAATaGAATAATGAGATGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSKVSVLRSKVLHTLTGKARCHE*NNEMLP Trigger: AGGAAGCATCTCATTATTCAATTCATGACATCGTGC...CTTACCTGTCAGTGTATGAAGCACTTTGCTCCTTAAGACAGACACCTTGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGAGTTGGAGTTGGAGTaGGAGTGGGTGTTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPIWPKLLKTDLKTLHMCELELE*EWVLKL Trigger: CAACTTCAACACCCACTCCAACTCCAACTCCAACTC...ACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTGGTTGTGGCAGGGTaGATGTTAAAAATGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTLVVAG*MLKMKG Trigger: GCCTTTCATTTTTAACATCAACCCTGCCACAACCAA...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAACCTAAGTTGAGCACTTaGAGGTTGACAGCTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKPKLST*RLTAAG Trigger: ACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGG...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTCTTGTTGGAAATGTaGAAAGCTGAGCCATTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTFLLEM*KAEPLA Trigger: GGCTAATGGCTCAGCTTTCAACATTTCCAACAAGAA...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCACTCACTGTACCATTTaGGACAAAAGCTTGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VMLISLRHLRLGSQFGQSTHCTI*DKSLQV Trigger: CACCTGCAAGCTTTTGTCCAAAATGGTACAGTGAGT...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAACACAGTGGTGGGAGTTaGGTCTTCTTCACACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKHSGGS*VFFTHL Trigger: CAAGTGTGTGAAGAAGACCAAACTCCCACCACTGTG...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTTGTAGTTTCCAACGGTaGGAGTTGGAGTTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPIWPKLLKTDLKTLHMCCSFQR*ELELEL Trigger: CAACTCCAACTCCAACTCCAACCGTTGGAAACTACA...ACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAATTGAGCACTTTGAGGTaGACAGCTGCCGGTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKLSTLR*TAAGEV Trigger: AACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAA...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCGTCAAGATACTTAATTaGGCTGTTGTTCAGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTVKILN*AVVQPK Trigger: CTTAGGCTGAACAACAGCCAAATTAAGTATCTTGAC...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS-3UTR CAA 90 bp | TTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAACCTGCAAACAATTCTTGTTGGAAATGTaGAAAGCTGAGCCATTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FIGQIWNKAEVAKSTCKQFLLEM*KAEPLA Trigger: GGCTAATGGCTCAGCTTTCAACATTTCCAACAAGAA...TTGTTTGCAGGTTGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCCAGAAGCTAAGGTTCTaGTTGGAAATGTTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRLGSQFGQSFLRQTQKLRF*LEMLKA Trigger: AGCTTTCAACATTTCCAACAAGAACCTTAGCTTCTG...GGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS TCA 90 bp | TACTGTGCTATCACTAGTGTTGTAGGAAAGCACGATGTCATGAATTaGATAATGAGATGCTTCCTTGGTAAAATTCACAGCCCAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YCAITSVVGKHDVMN*IMRCFLGKIHSPRD Trigger: GTCTCTTGGGCTGTGAATTTTACCAAGGAAGCATCTCATTATTCAATTCATGACATCGTGCTTTCCTACAACACTAGTGATAGCACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS-3UTR CAA 90 bp | TTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAACCTGCAAACAAGCACGATGTCATGAATaGAATAATGAGATGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FIGQIWNKAEVAKSTCKQARCHE*NNEMLP Trigger: AGGAAGCATCTCATTATTCAATTCATGACATCGTGC...TTGTTTGCAGGTTGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGAAAGCTAAGGTTCTTGTaGGAAATGTTGAAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRKLRFL*EMLKAE Trigger: CTCAGCTTTCAACATTTCCAACAAGAACCTTAGCTT...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAAGAACAAAGCACATTACCACCAACAAGGAAGACTGGAAGGTTCAAGACAGAAGCTAAGGTTCTaGTTGGAAATGTTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGKNKAHYHQQGRLEGSRQKLRF*LEMLKA Trigger: AGCTTTCAACATTTCCAACAAGAACCTTAGCTTCTG...TCTTGAACCTTCCAGTCTTCCTTGTTGGTGGTAATGTGCTTTGTTCTTTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | CAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTGTTTATCTGCACTGCAGTCTaGAGCTGTAGAATACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QFGQSFLRQTLKHCICVFICTAV*SCRILS Trigger: GGACAGTATTCTACAGCTCAAGACTGCAGTGCAGAT...AAACACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
||
| CDS TCA 90 bp | TATTGTGAAATTCATCTCCCATTCTGCATAAAGGCAAGTACCCTTTaGATCTGTCAAATTAACTATCAATGCATTGGACTGAACGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YCEIHLPFCIKASTL*ICQINYQCIGLNGS Trigger: GGAGCCGTTCAGTCCAATGCATTGATAGTTAATTTGACAGATTCAAAGGGTACTTGCCTTTATGCAGAATGGGAGATGAATTTCACAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAACTCACTGTACCATTTaGGACAAAAGCTTGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKTHCTI*DKSLQV Trigger: CACCTGCAAGCTTTTGTCCAAAATGGTACAGTGAGT...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | GTCATGTTAATAAGTTTAAGGCATCTTAGGTTAGGATCCCAATTTGGCCAAAGCGACAGCGAATCCAAATaGTATCATTATTTTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VMLISLRHLRLGSQFGQSDSESK*YHYFGT Trigger: AGTGCCAAAATAATGATACAATTTGGATTCGCTGTC...GCTTTGGCCAAATTGGGATCCTAACCTAAGATGCCTTAAACTTATTAACATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
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| CDS-3UTR CAA 90 bp | ACTGATACCTTTTTCATAGGTCAAATATGGAACAAGGCCGAAGTAGCTAAGTCAGACAGCGAATCCAAATaGTATCATTATTTTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDTFFIGQIWNKAEVAKSDSESK*YHYFGT Trigger: AGTGCCAAAATAATGATACAATTTGGATTCGCTGTC...TGACTTAGCTACTTCGGCCTTGTTCCATATTTGACCTATGAAAAAGGTATCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAATTGGTTGTGGCAGGGTaGATGTTAAAAATGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKLVVAG*MLKMKG Trigger: GCCTTTCATTTTTAACATCAACCCTGCCACAACCAA...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATTTGGCCAAAGCTTCTTAAGACAGACCTTAAAACATTGCATATGTGTAAGCTAAGGTTCTTGTaGGAAATGTTGAAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IPIWPKLLKTDLKTLHMCKLRFL*EMLKAE Trigger: CTCAGCTTTCAACATTTCCAACAAGAACCTTAGCTT...ACACATATGCAATGTTTTAAGGTCTGTCTTAAGAAGCTTTGGCCAAATTGGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016678.14 |
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| CDS TCA 90 bp | ATGACATCCAATGGAACTTTGAAATTCTCAGGATTTTTAACAGTATaGACTCCTTTAGCTACAGCACCAGGAAATACTGTGCTATCACTA | + |
|
Preference number: 5 (lower is better) Translates to: MTSNGTLKFSGFLTV*TPLATAPGNTVLSL Trigger: TAGTGATAGCACAGTATTTCCTGGTGCTGTAGCTAAAGGAGTTCATACTGTTAAAAATCCTGAGAATTTCAAAGTTCCATTGGATGTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
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| CDS-3UTR CAA 90 bp | AAAATATCCCACACCAGACAGAGTATATTACCATCAAGAAGCAAAACCAGTAAAGTCAAGATACTTAATTaGGCTGTTGTTCAGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KISHTRQSILPSRSKTSKVKILN*AVVQPK Trigger: CTTAGGCTGAACAACAGCCAAATTAAGTATCTTGAC...TTTACTGGTTTTGCTTCTTGATGGTAATATACTCTGTCTGGTGTGGGATATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061755.9 |
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| CDS CAA 72 bp | TTGGCTGTTGTTCAGCCTAAGTTGAGCACTTTGAGGTaGACAGCTGCCGGTGAAGTTGGTTGTGGCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAVVQPKLSTLR*TAAGEVGCGRV Trigger: AACCCTGCCACAACCAACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAACAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
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| CDS GCA 72 bp | TCATTATTTTGGCACTATTCCGGTCATCCCCACAACTaGTTCCATCGTGTGTCGCCTTGTCAGGTACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLFWHYSGHPHN*FHRVSPCQVLQ Trigger: TTGCAGTACCTGACAAGGCGACACACGATGGAAGCAGTTGTGGGGATGACCGGAATAGTGCCAAAATAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
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| CDS GCA 72 bp | CACAGCAATTATAAGGAAGCCCAAGGCCACACCCACTaGAACAGGAATAAGAAAGTTGAGGTCAGAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSNYKEAQGHTH*NRNKKVEVRVS Trigger: GCTGACTCTGACCTCAACTTTCTTATTCCTGTTGCAGTGGGTGTGGCCTTGGGCTTCCTTATAATTGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | CTTAATTTGGCTGTTGTTCAGCCTAAGTTGAGCACTTaGAGGTTGACAGCTGCCGGTGAAGTTGGTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LNLAVVQPKLST*RLTAAGEVGCG Trigger: GCCACAACCAACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAACAGCCAAATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | CGGTCATCCCCACAACTGCTTCCATCGTGTGTCGCCTaGTCAGGTACTGCAATGGTTATAGTTTTATTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSPQLLPSCVA*SGTAMVIVLLV Trigger: AACCAATAAAACTATAACCATTGCAGTACCTGACAAGGCGACACACGATGGAAGCAGTTGTGGGGATGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | GAACTTCCCAGAGGGGCATCCCAGAAGCTAAGGTTCTaGTTGGAAATGTTGAAAGCTGAGCCATTAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ELPRGASQKLRF*LEMLKAEPLAK Trigger: TTTGGCTAATGGCTCAGCTTTCAACATTTCCAACAAGAACCTTAGCTTCTGGGATGCCCCTCTGGGAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 90 bp | GCACTATTCCGGTCATCCCCACAACTGCTTCCATCGTGTGTCGCCTaGTCAGGTACTGCAATGGTTATAGTTTTATTGGTTTGGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ALFRSSPQLLPSCVA*SGTAMVIVLLVWFV Trigger: TACAAACCAAACCAATAAAACTATAACCATTGCAGTACCTGACAAGGCGACACACGATGGAAGCAGTTGTGGGGATGACCGGAATAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 90 bp | AAATTCACAGCCCAAGAGACAGCGAATCCAAATTGTATCATTATTTaGGCACTATTCCGGTCATCCCCACAACTGCTTCCATCGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KFTAQETANPNCIII*ALFRSSPQLLPSCV Trigger: GACACACGATGGAAGCAGTTGTGGGGATGACCGGAATAGTGCCAAAATAATGATACAATTTGGATTCGCTGTCTCTTGGGCTGTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | GTCAAGATACTTAATTTGGCTGTTGTTCAGCCTAAGTaGAGCACTTTGAGGTTGACAGCTGCCGGTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VKILNLAVVQPK*STLRLTAAGEV Trigger: AACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 90 bp | AAAGATAAAGTCAAGATACTTAATTTGGCTGTTGTTCAGCCTAAGTaGAGCACTTTGAGGTTGACAGCTGCCGGTGAAGTTGGTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDKVKILNLAVVQPK*STLRLTAAGEVGCG Trigger: GCCACAACCAACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGACTTTATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | GGTAAAATTCACAGCCCAAGAGACAGCGAATCCAAATaGTATCATTATTTTGGCACTATTCCGGTCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GKIHSPRDSESK*YHYFGTIPVIP Trigger: GGGGATGACCGGAATAGTGCCAAAATAATGATACAATTTGGATTCGCTGTCTCTTGGGCTGTGAATTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS TCA 72 bp | TTAAAAGGTTGCACCTTTAGGTTAAAGGTGTTGATCTaGAACGCTCTAGACACAGAAAGCACCTGCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LKGCTFRLKVLI*NALDTESTCSL Trigger: CAAAGAGCAGGTGCTTTCTGTGTCTAGAGCGTTTCAGATCAACACCTTTAACCTAAAGGTGCAACCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS GCA 72 bp | ACAACTGCTTCCATCGTGTGTCGCCTTGTCAGGTACTaGAATGGTTATAGTTTTATTGGTTTGGTTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTASIVCRLVRY*NGYSFIGLVCS Trigger: ACTACAAACCAAACCAATAAAACTATAACCATTGCAGTACCTGACAAGGCGACACACGATGGAAGCAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS TCA 72 bp | ATTCATCTCCCATTCTGCATAAAGGCAAGTACCCTTTaGATCTGTCAAATTAACTATCAATGCATTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: IHLPFCIKASTL*ICQINYQCIGL Trigger: CAGTCCAATGCATTGATAGTTAATTTGACAGATTCAAAGGGTACTTGCCTTTATGCAGAATGGGAGATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS TCA 72 bp | ATCACTAGTGTTGTAGGAAAGCACGATGTCATGAATTaGATAATGAGATGCTTCCTTGGTAAAATTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITSVVGKHDVMN*IMRCFLGKIHS Trigger: GCTGTGAATTTTACCAAGGAAGCATCTCATTATTCAATTCATGACATCGTGCTTTCCTACAACACTAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS TCA 72 bp | AATGGAACTTTGAAATTCTCAGGATTTTTAACAGTATaGACTCCTTTAGCTACAGCACCAGGAAATACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NGTLKFSGFLTV*TPLATAPGNTV Trigger: CACAGTATTTCCTGGTGCTGTAGCTAAAGGAGTTCATACTGTTAAAAATCCTGAGAATTTCAAAGTTCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
||
| CDS CAA 72 bp | ATTTTTCACAGCAAAGATAAAGTCAAGATACTTAATTaGGCTGTTGTTCAGCCTAAGTTGAGCACTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IFHSKDKVKILN*AVVQPKLSTLR Trigger: CCTCAAAGTGCTCAACTTAGGCTGAACAACAGCCAAATTAAGTATCTTGACTTTATCTTTGCTGTGAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016678.14 ENSMUST00000061755.9 ENSMUST00000074913.12 |
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