Pregenerated sensors for LAMB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026639Ensembl transcript IDs: ENSMUST00000016315.16, ENSMUST00000159955.2, ENSMUST00000192322.6, ENSMUST00000194677.6
Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 72 bp | GTCCCAGACTCTACCACAGTGGAGGGCAGGAGGAGTTaGTGTTGGGGGCACATTGTCCATTCCAGCTGGAGG | + |
Preference number: 3 (lower is better) Translates to: VPDSTTVEGRRS*CWGHIVHSSWR Trigger: CCTCCAGCTGGAATGGACAATGTGCCCCCAACACCAACTCCTCCTGCCCTCCACTGTGGTAGAGTCTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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3UTR CCA 72 bp | GACTCTACCACAGTGGAGGGCAGGAGGAGTTGGTGTTaGGGGCACATTGTCCATTCCAGCTGGAGGGTTTTC | + |
Preference number: 3 (lower is better) Translates to: DSTTVEGRRSWC*GHIVHSSWRVF Trigger: GAAAACCCTCCAGCTGGAATGGACAATGTGCCCCCAACACCAACTCCTCCTGCCCTCCACTGTGGTAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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3UTR CCA 72 bp | GTTCCGTTTTTGAGTTGGTCCCAGACTCTACCACAGTaGAGGGCAGGAGGAGTTGGTGTTGGGGGCACATTG | + |
Preference number: 3 (lower is better) Translates to: VPFLSWSQTLPQ*RAGGVGVGGTL Trigger: CAATGTGCCCCCAACACCAACTCCTCCTGCCCTCCACTGTGGTAGAGTCTGGGACCAACTCAAAAACGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGCAGGGCCATGAGCTaGGCTCCTCCGGTGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRRAMS*APPVPP Trigger: AGGAGGCACCGGAGGAGCTCAGCTCATGGCCCTGCG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTAGGCGCAGGGCCATaGGCTGAGCTCCTCCGGTGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLGAGP*AELLRC Trigger: GCACCGGAGGAGCTCAGCTCATGGCCCTGCGCCTAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGCCGGGCCTGCATTaGCTGGGCCTGCTCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLPGLH*LGLLLL Trigger: CAGGAGGAGCAGGCCCAGGCAATGCAGGCCCGGCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCAAGCTGCCGGGCCTaGATTGCCTGGGCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCASCRA*IAWACS Trigger: GGAGCAGGCCCAGGCAATGCAGGCCCGGCAGCTTGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGCAGCCCAGGCCGCTaGCCAGCTTCCAGTGGGAAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRSPGR*PASSGK Trigger: CTTCCCACTGGAAGCTGGCCAGCGGCCTGGGCTGCG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCGCAGCACTGTGGCTaGGTCTGTGGGCAGCCAGAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAQHCG*VCGQPE Trigger: CTCTGGCTGCCCACAGACTCAGCCACAGTGCTGCGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGCGCTCGCAGTTCTTaGCCTCGGTGTGGTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSARSS*PRCGPG Trigger: GCCGGGACCACACCGAGGGCAAGAACTGCGAGCGCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCTGAGCTCCTCCGGTaGCTCCTCCTCCAGCCTGTC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAELLR*LLLQPV Trigger: GACAGGCTGGAGGAGGAGGCACCGGAGGAGCTCAGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGGCTGGCACCCTCTaGAAGCTGCCGGGCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLAGTL*KLPGLH Trigger: ATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGGCCCCTTTGGCTCTaGGCAGGGCTCCCCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRPLWL*AGLPCS Trigger: ACTGCAGGGGAGCCCTGCCCAGAGCCAAAGGGGCCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGTGGGCTCGGCTTCTaGCCTGCTCAGCCTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRGLGF*PAQPQP Trigger: AGGCTGAGGCTGAGCAGGCCAGAAGCCGAGCCCACG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCGGACCTGTTGGATaGGAAGCCGTGTGCGCTGGA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPGPVG*EAVCAG Trigger: TCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCAGCACTGCCTCGCTaGCCTGTTGGATGGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPALPR*PVGWWL Trigger: CAGCCACCATCCAACAGGTCAGCGAGGCAGTGCTGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCAGCACAGGACTCTaGCCCAGCCGGTCCTTCAAC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPSTGL*PSRSFN Trigger: GTTGAAGGACCGGCTGGGTCAGAGTCCTGTGCTGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTCGGGAGCAGGCTTaGTGGGCACACAGGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPREQA*WAHRKP Trigger: TGGCTTCCTGTGTGCCCAGCAAGCCTGCTCCCGAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGCCCTCTGCTTCCCTaGGACTGTCCCTCAACTGGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGPLLP*DCPSTG Trigger: GCCAGTTGAGGGACAGTCGCAGGGAAGCAGAGGGCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGGCAGGGCTCCCCTaGAGTGAGAGCCACAAGCTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWAGLP*SESHKL Trigger: CAGCTTGTGGCTCTCACTGCAGGGGAGCCCTGCCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTTGGGCTGGCCCTGGTaGACCTGGGGAAAGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLGWPW*TWGKVL Trigger: CAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGTCCTGCCAGTTCTTaGGCTGGCCCTGGTGGACCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRPASS*AGPGGP Trigger: AGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGCAGAACTACACGTaGGGCCGCCAAACCCTTCCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLQNYT*GRQTLP Trigger: GGGAAGGGTTTGGCGGCCTCACGTGTAGTTCTGCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGGGCTCCCCTGCAGTaGGAGCCACAAGCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRAPLQ*EPQAVP Trigger: TGGTACAGCTTGTGGCTCTCACTGCAGGGGAGCCCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCTGCATTGTGTCCTaGGCTTCCTGCAGAGCCACG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPCIVS*ASCRAT Trigger: CGTGGCTCTGCAGGAAGCTCAGGACACAATGCAGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGTGTCCTGGCCCTCTaGAGGTCTCCATGGACGGTT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGVLAL*RSPWTV Trigger: AACCGTCCATGGAGACCTGCAGAGGGCCAGGACACC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGGAGCTTAGGGAGTTaGGAGGGTCACAGGCACAGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGSLGS*EGHRHR Trigger: CCTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCTCTCCAGGCCCTCTaGTTCCCTGCGACTGTCCCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSLQAL*FPATVP Trigger: AGGGACAGTCGCAGGGAAGCAGAGGGCCTGGAGAGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCAGCCCCGACAGGTCTaGAGAGCGCAGCATGATAGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCQPRQV*RAQHDS Trigger: GCTATCATGCTGCGCTCTGCAGACCTGTCGGGGCTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCAAGTCCCCCACAGGTaGATAACAGGCCCCTCGGGA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCQVPHR*ITGPSG Trigger: TCCCGAGGGGCCTGTTATCCACCTGTGGGGGACTTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCACTGCCACCAGCGCATaGGGCCTGAAGACGATGCGA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCTATSA*GLKTMR Trigger: TCGCATCGTCTTCAGGCCCCATGCGCTGGTGGCAGT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTGGGGAAAGGTGCTaGCACAGTCTGTCGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPGERC*HSLSPG Trigger: ACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTTCTTGGGCTGGCCCTaGTGGACCTGGGGAAAGGTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCFLGWP*WTWGKV Trigger: CACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAAAGTAGGCGCTGGGTaGATAGGAGCCCCTCTGGGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCKVGAG*IGAPLG Trigger: CCCCAGAGGGGCTCCTATCCACCCAGCGCCTACTTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCACCTTTGGCACTCGTaGGTGTCCTGGCCCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHLWHS*VSWPSA Trigger: TGCAGAGGGCCAGGACACCCACGAGTGCCAAAGGTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGGCCAGCTTCCAGTaGGAAGGGGCACACTGGTCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLASFQ*EGAHWS Trigger: TGACCAGTGTGCCCCTTCCCACTGGAAGCTGGCCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAAGCCCCGGACCTGTTaGATGAGAAGCCGTGTGCGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCKPRTC*MRSRVR Trigger: GCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCTTGCGCAGCACTGTaGCTGAGTCTGTGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSCAAL*LSLWAA Trigger: GGCTGCCCACAGACTCAGCCACAGTGCTGCGCAAGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCTGAGTCCTTCCAATaGGCAAGTCCCCCACAGGTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAESFQ*ASPPQV Trigger: CACCTGTGGGGGACTTGCTCATTGGAAGGACTCAGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCTCACATCATTCTGTaGCTGCCACCAGCGCATGGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAHIIL*LPPAHG Trigger: CCCATGCGCTGGTGGCAGTCACAGAATGATGTGAGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCATTACGGAGACTGTaGAGGCGTCGAGCTTGCTCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCALRRL*RRRACS Trigger: GGAGCAAGCTCGACGCCTTCACAGTCTCCGTAATGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGCAGCATGATAGCCTaGCTCCCTCGAAGCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRSMIA*LPRSSS Trigger: AGAGCTGCTTCGAGGGAGTCAGGCTATCATGCTGCG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGGAGCTCCCTGGACTaGTCCATCTGGATCACACTC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGSSLD*SIWITL Trigger: GAGTGTGATCCAGATGGAGCAGTCCAGGGAGCTCCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGAACTGTCAGACACTTaGTGTGCAGCCCGGGAGGAC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCELSDT*CAARED Trigger: GTCCTCCCGGGCTGCACAGCAAGTGTCTGACAGTTC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCTGCCCTGATCATTTaGCTGGTCTGCTGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAALII*LVCWSW Trigger: CCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCAGAGAGCCAGCACTaGCTCGCTGACCTGTTGGAT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPESQH*LADLLD Trigger: ATCCAACAGGTCAGCGAGGCAGTGCTGGCTCTCTGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGGCATTCATTGCCTaGTGGCTGGCACCCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWAFIA*WLAPSA Trigger: TGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGCAAAGTAGGCGCTaGGTGGATAGGAGCCCCTCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLQSRR*VDRSPS Trigger: AGAGGGGCTCCTATCCACCCAGCGCCTACTTTGCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCACAGCTGGGTCGAAGTaGCAGGTCTCTGAGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCTAGSK*QVSECP Trigger: TGGGCACTCAGAGACCTGCCACTTCGACCCAGCTGT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGCAGCAAACACAGCTaGGTCGAAGTGGCAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGSKHS*VEVAGL Trigger: GAGACCTGCCACTTCGACCCAGCTGTGTTTGCTGCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGGAAGGGGCACACTaGTCACATTTGGGGCCCACT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWEGAH*SHLGPT Trigger: AGTGGGCCCCAAATGTGACCAGTGTGCCCCTTCCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCGAGAAGCCAGGCCATaGTCTTCCAGACCTGTCCCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCREARP*SSRPVP Trigger: AGGGACAGGTCTGGAAGACCATGGCCTGGCTTCTCG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCCTCGCTGACCTGTTaGATGGTGGCTGCATCTGTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCASLTC*MVAASV Trigger: CACAGATGCAGCCACCATCCAACAGGTCAGCGAGGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGAAGTGGCAGGTCTCTaGGTGCCCATTGCAGTCACA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCEVAGL*VPIAVT Trigger: TGTGACTGCAATGGGCACTCAGAGACCTGCCACTTC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGTACAAGGACCTGCTaGACCTCACCAACCCTTTCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGTRTC*TSPTLS Trigger: GGAAAGGGTTGGTGAGGTTCAGCAGGTCCTTGTACC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCACATCATTCTGTGACTaGCACCAGCGCATGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCTSFCD*HQRMGP Trigger: AGGCCCCATGCGCTGGTGGCAGTCACAGAATGATGT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGGCACCTAAGATACTaGAGTCACAGGCATGGCAGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGHLRY*SHRHGS Trigger: GCTGCCATGCCTGTGACTGCAGTATCTTAGGTGCCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAAGCCATGGTCAGCATaGGGAAGGCTCCTGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCKPWSA*GRLLKG Trigger: ACCCTTCAGGAGCCTTCCGCATGCTGACCATGGCTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTCCATTTGTCCCCTaGCTGGCAGCAAACACAGCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPPFVP*LAANTA Trigger: AGCTGTGTTTGCTGCCAGCCAGGGGACAAATGGAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCACAGGGAGCTCCCTaGACTGCTCCATCTGGATCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSQGAP*TAPSGS Trigger: TGATCCAGATGGAGCAGTCCAGGGAGCTCCCTGTGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCTTTGCACACACACTaGCCCGTCAGTCGGTCACAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSLHTH*PVSRSQ Trigger: CTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTCTGGTCAGGACACTaGCGGATGGCTGCAGAACTA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVWSGH*RMAAEL Trigger: TAGTTCTGCAGCCATCCGCCAGTGTCCTGACCAGAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCATCAGCAAGCGGCTaGTACTCACCTGGGTCTCAA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPSASG*YSPGSQ Trigger: TTGAGACCCAGGTGAGTACCAGCCGCTTGCTGATGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGAAGCCGTGTGCGCTaGACATCTTCCTCCATCAGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRSRVR*TSSSIS Trigger: GCTGATGGAGGAAGATGTCCAGCGCACACGGCTTCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGAGCCTGGCCGCAATaGCCTGGATCTCTTTCATCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGAWPQ*PGSLSS Trigger: AGATGAAAGAGATCCAGGCCATTGCGGCCAGGCTCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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3UTR CAA 72 bp | AGACTCTACCACAGTGGAGGGCAGGAGGAGTTGGTGTaGGGGGCACATTGTCCATTCCAGCTGGAGGGTTTT | + |
Preference number: 4 (lower is better) Translates to: RLYHSGGQEELV*GAHCPFQLEGF Trigger: AAAACCCTCCAGCTGGAATGGACAATGTGCCCCCAACACCAACTCCTCCTGCCCTCCACTGTGGTAGAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGAGGCTCGAAGAAGCTaGGTCCTTCCAATGAGCAAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCEARRS*VLPMSK Trigger: CTTGCTCATTGGAAGGACTCAGCTTCTTCGAGCCTC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGACCCTCTGTTCCTCTaGAGTCACAGTCACAAGCTC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCDPLFL*SHSHKL Trigger: GAGCTTGTGACTGTGACTTCAGAGGAACAGAGGGTC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCACATCCTGCTCTGTaGCAGAAGTGCCTTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPHPAL*QKCLPE Trigger: TTCTGGAAGGCACTTCTGTCACAGAGCAGGATGTGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTCTGCCTCCATCTTaGTGCTCAGGATTCGATTGC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPLPPS*CSGFDC Trigger: GCAATCGAATCCTGAGCATCAAGATGGAGGCAGAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTTGTCTAGGTCCAGCTaGAGAGAGACAGGGCTCACA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLSRSS*RETGLT Trigger: TGTGAGCCCTGTCTCTCTGCAGCTGGACCTAGACAA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGGCCAGCTGTGTTATaGTGGCAGACACAGACATTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGPAVL*WQTQTL Trigger: CAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGCAGGTCTCTGAGTaGCCATTGCAGTCACACCTT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWQVSE*PLQSHL Trigger: AAGGTGTGACTGCAATGGGCACTCAGAGACCTGCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTTGCACGTACTCTTTaGACACACACTGGCCCGTCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLARTL*THTGPS Trigger: TGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCAAAGAGCTCCTCTaGCTCCATCTTGATGCTCAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPKELL*LHLDAQ Trigger: CTGAGCATCAAGATGGAGGCAGAGGAGCTCTTTGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCACAGCGGTCACAATTaGGGCCAGCTGTGTTATGCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHSGHN*GQLCYA Trigger: AGCATAACACAGCTGGCCCCAATTGTGACCGCTGTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCACACTGGTCACATTTaGGGCCCACTACATTGGGCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHTGHI*GPLHWA Trigger: TGCCCAATGTAGTGGGCCCCAAATGTGACCAGTGTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCACCAGCCTTTCAGCTaGTACAAGGACCTGCTGAAC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHQPFS*YKDLLN Trigger: GTTCAGCAGGTCCTTGTACCAGCTGAAAGGCTGGTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTCTTAAAGCCCTCCTaGGCATTCATTGCCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLLKPS*AFIACW Trigger: CCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGCCACAAAGCTTGTTaGTGGTGGGTGTCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCCHKAC*WWVSSQ Trigger: CTGACTTGACACCCACCATCAACAAGCTTTGTGGCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCCTGGAGTCACACTTaGAGCATTTCATCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAWSHT*SISSAT Trigger: AGTGGCAGATGAAATGCTGCAAGTGTGACTCCAGGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCACACCCTCCATGTCTTaGCAAAGTCAGAAGAGCGCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCTPSMS*QSQKSA Trigger: AGCGCTCTTCTGACTTTGGCAAGACATGGAGGGTGT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCTCTGAGTGCCCATTaGAGTCACACCTTTGGCACT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSLSAH*SHTFGT Trigger: AGTGCCAAAGGTGTGACTGCAATGGGCACTCAGAGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCATCATTTGCCTGGTCTaGTGGAGCTGGGTGTTGAAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCIICLV*WSWVLK Trigger: CTTCAACACCCAGCTCCAGCAGACCAGGCAAATGAT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAAGCTCCTTCATCCGTaGCCAGAATCCACTCATCTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCKLLHP*PESTHL Trigger: CAGATGAGTGGATTCTGGGCACGGATGAAGGAGCTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTCTGCAGGTCTCCATaGACGGTTGTTGTAGAAAGG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLCRSP*TVVVER Trigger: CCTTTCTACAACAACCGTCCATGGAGACCTGCAGAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGGACTGCTCCATCTaGATCACACTCACAGGGAAT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLDCSI*ITLTGN Trigger: ATTCCCTGTGAGTGTGATCCAGATGGAGCAGTCCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCTCGAAGCAGCTCTaGCTCCATGTCTTTCATTTT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPSKQL*LHVFHF Trigger: AAAATGAAAGACATGGAGTCAGAGCTGCTTCGAGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAATTTCGAGGCAGCCTaGAGTCACACTTGCAGCATT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCNFEAA*SHTCSI Trigger: AATGCTGCAAGTGTGACTCCAGGCTGCCTCGAAATT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCAGCTGTGTTATGCTaGCAGACACAGACATTGTTG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPAVLC*QTQTLL Trigger: CAACAATGTCTGTGTCTGCCAGCATAACACAGCTGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCATTTGCCTGGTCTGCTaGAGCTGGGTGTTGAAGTTT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCICLVC*SWVLKF Trigger: AAACTTCAACACCCAGCTCCAGCAGACCAGGCAAAT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR TCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTTCCAGAATCTGTCTaGTCTGCTCAATCTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLPESV*SAQSCS Trigger: AGAGCAAGATTGAGCAGATCAGACAGATTCTGGAAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCATCTGTTCCTTCATaGCTTTCACCAGCCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSSVPS*LSPAFQ Trigger: CTGAAAGGCTGGTGAAAGGCATGAAGGAACAGATGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCCATAAGGTTAAGTTaGACCTTTCCCCCAGTCAGA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSIRLS*TFPPVR Trigger: TCTGACTGGGGGAAAGGTCCAACTTAACCTTATGGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCATGTCTTGTTTGGTCTaGGATAGCACTGAGTCCACA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCMSCLV*DSTEST Trigger: TGTGGACTCAGTGCTATCCCAGACCAAACAAGACAT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGAATCTGTCTGATCTaGTCAATCTTGCTCTTGGCA | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCRICLI*SILLLA Trigger: TGCCAAGAGCAAGATTGAGCAGATCAGACAGATTCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTTAGCTTCTCAAATTaGTCCTTCTTGCTTCGGTAC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLSFSN*SFLLRY Trigger: GTACCGAAGCAAGAAGGAGCAATTTGAGAAGCTAAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAATCAACATGCCAGCTaGTGTGAGACCCTTAAAATC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCNQHAS*CETLKI Trigger: GATTTTAAGGGTCTCACACCAGCTGGCATGTTGATT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR GCA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAACTCTGTATACTTTTaGTTAAGTCTCTTAAAGCCC | + |
Preference number: 4 (lower is better) Translates to: QGDQSMLSMVETFPSPVCNSVYF*LSLLKP Trigger: GGGCTTTAAGAGACTTAAGCAAAAGTATACAGAGTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CTCTGGGACAAGGGCCGGCACCGGACGTCCTGCCAGTTCTTGGGCTaGCCCTGGTGGACCTGGGGAAAGGTGCTGGCACAGTCTGTCGCC | + |
Preference number: 5 (lower is better) Translates to: LWDKGRHRTSCQFLG*PWWTWGKVLAQSVA Trigger: GGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CATTGCCTGCTGGCTGGCACCCTCTGCAAGCTGCCGGGCCTGCATTaGCTGGGCCTGCTCCTCCTGGGCCTGACGGCGAAGCTCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: HCLLAGTLCKLPGLH*LGLLLLGLTAKLLH Trigger: ATGAAGGAGCTTCGCCGTCAGGCCCAGGAGGAGCAGGCCCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | AAGGGCCGGCACCGGACGTCCTGCCAGTTCTTGGGCTGGCCCTGGTaGACCTGGGGAAAGGTGCTGGCACAGTCTGTCGCCAGGTACTGG | + |
Preference number: 5 (lower is better) Translates to: KGRHRTSCQFLGWPW*TWGKVLAQSVARYW Trigger: CCAGTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GACAAGGGCCGGCACCGGACGTCCTGCCAGTTCTTGGGCTGGCCCTaGTGGACCTGGGGAAAGGTGCTGGCACAGTCTGTCGCCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: DKGRHRTSCQFLGWP*WTWGKVLAQSVARY Trigger: GTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 90 bp | AGATGCCCATTAGGCCTCTGGGACAAGGGCCGGCACCGGACGTCCTaGCAGTTCTTGGGCTGGCCCTGGTGGACCTGGGGAAAGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: RCPLGLWDKGRHRTS*QFLGWPWWTWGKVL Trigger: CAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAGGCCTAATGGGCATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CTTAAAGCCCTCCTGGGCATTCATTGCCTGCTGGCTGGCACCCTCTaGAAGCTGCCGGGCCTGCATTGCCTGGGCCTGCTCCTCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: LKALLGIHCLLAGTL*KLPGLHCLGLLLLG Trigger: GCCCAGGAGGAGCAGGCCCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CGGCACCGGACGTCCTGCCAGTTCTTGGGCTGGCCCTGGTGGACCTaGGGAAAGGTGCTGGCACAGTCTGTCGCCAGGTACTGGTACACC | + |
Preference number: 5 (lower is better) Translates to: RHRTSCQFLGWPWWT*GKVLAQSVARYWYT Trigger: GGTGTACCAGTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CCTTCCACAGCGTGGGCTCGGCTTCTGGCCTGCTCAGCCTCAGCCTaGAGCCTGCGGGCCCGTGCGATGTCTTGTTTGGTCTGGGATAGC | + |
Preference number: 5 (lower is better) Translates to: PSTAWARLLACSASA*SLRARAMSCLVWDS Trigger: GCTATCCCAGACCAAACAAGACATCGCACGGGCCCGCAGGCTCCAGGCTGAGGCTGAGCAGGCCAGAAGCCGAGCCCACGCTGTGGAAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TGCCGAAGGTTCCCGACCACATCATCTACCTGCCCTTCCACAGCGTaGGCTCGGCTTCTGGCCTGCTCAGCCTCAGCCTGGAGCCTGCGG | + |
Preference number: 5 (lower is better) Translates to: CRRFPTTSSTCPSTA*ARLLACSASAWSLR Trigger: CCGCAGGCTCCAGGCTGAGGCTGAGCAGGCCAGAAGCCGAGCCCACGCTGTGGAAGGGCAGGTAGATGATGTGGTCGGGAACCTTCGGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CAGCGTGGGCTCGGCTTCTGGCCTGCTCAGCCTCAGCCTGGAGCCTaGGGGCCCGTGCGATGTCTTGTTTGGTCTGGGATAGCACTGAGT | + |
Preference number: 5 (lower is better) Translates to: QRGLGFWPAQPQPGA*GPVRCLVWSGIALS Trigger: ACTCAGTGCTATCCCAGACCAAACAAGACATCGCACGGGCCCGCAGGCTCCAGGCTGAGGCTGAGCAGGCCAGAAGCCGAGCCCACGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | AGAGCCACGGTGCCCTGCCGAAGGTTCCCGACCACATCATCTACCTaGCCTTCCACAGCGTGGGCTCGGCTTCTGGCCTGCTCAGCCTCA | + |
Preference number: 5 (lower is better) Translates to: RATVPCRRFPTTSST*PSTAWARLLACSAS Trigger: TGAGGCTGAGCAGGCCAGAAGCCGAGCCCACGCTGTGGAAGGGCAGGTAGATGATGTGGTCGGGAACCTTCGGCAGGGCACCGTGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | GTCACAGCGGGGCCCGGTAAAGCCAGGGCGGCAGAGGCAACGGCCTaGGGCTTTGTCACAGCCAGGACCCTCTGTTCCTCTGAAGTCACA | + |
Preference number: 5 (lower is better) Translates to: VTAGPGKARAAEATA*GFVTARTLCSSEVT Trigger: TGTGACTTCAGAGGAACAGAGGGTCCTGGCTGTGACAAAGCCTCAGGCCGTTGCCTCTGCCGCCCTGGCTTTACCGGGCCCCGCTGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | TCCTGGATGAGCCGAAGAGAGCGGCCAGTACCCTGCATTGTGTCCTaGGCTTCCTGCAGAGCCACGGTGCCCTGCCGAAGGTTCCCGACC | + |
Preference number: 5 (lower is better) Translates to: SWMSRRERPVPCIVS*ASCRATVPCRRFPT Trigger: GGTCGGGAACCTTCGGCAGGGCACCGTGGCTCTGCAGGAAGCTCAGGACACAATGCAGGGTACTGGCCGCTCTCTTCGGCTCATCCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GCTGCTCAGCTACCCGCCCTGCCATGTGGAAGGCCCCTTTGGCTCTaGGCAGGGCTCCCCTGCAGTGAGAGCCACAAGCTGTACCATTGT | + |
Preference number: 5 (lower is better) Translates to: AAQLPALPCGRPLWL*AGLPCSESHKLYHC Trigger: ACAATGGTACAGCTTGTGGCTCTCACTGCAGGGGAGCCCTGCCCAGAGCCAAAGGGGCCTTCCACATGGCAGGGCGGGTAGCTGAGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TCCTCCATCAGCAAGCGGCTGGTACTCACCTGGGTCTCAAGGCGCTaGGCATCGGCTTGGACCCTTGATGCTGCTTCCTCGGCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: SSISKRLVLTWVSRR*ASAWTLDAASSAAL Trigger: CAGGGCAGCCGAGGAAGCAGCATCAAGGGTCCAAGCCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTTGCTGATGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | GGCCGCAATGGCCTGGATCTCTTTCATCTTGCGCAGCACTGTGGCTaGGTCTGTGGGCAGCCAGAGAGCCAGCACTGCCTCGCTGACCTG | + |
Preference number: 5 (lower is better) Translates to: GRNGLDLFHLAQHCG*VCGQPESQHCLADL Trigger: CAGGTCAGCGAGGCAGTGCTGGCTCTCTGGCTGCCCACAGACTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCAGGCCATTGCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CGTCCTGCCAGTTCTTGGGCTGGCCCTGGTGGACCTGGGGAAAGGTaGTGGCACAGTCTGTCGCCAGGTACTGGTACACCCTCCATGTCT | + |
Preference number: 5 (lower is better) Translates to: RPASSWAGPGGPGER*WHSLSPGTGTPSMS Trigger: AGACATGGAGGGTGTACCAGTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GCCTGTCTCTCCAGGCCCTCTGCTTCCCTGCGACTGTCCCTCAACTaGCTCAGCAGGCTAGAACTGTCAGACACTTGCTGTGCAGCCCGG | + |
Preference number: 5 (lower is better) Translates to: ACLSRPSASLRLSLN*LSRLELSDTCCAAR Trigger: CCGGGCTGCACAGCAAGTGTCTGACAGTTCTAGCCTGCTGAGCCAGTTGAGGGACAGTCGCAGGGAAGCAGAGGGCCTGGAGAGACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCTGCCGGGCCTGCATaGCCTGGGCCTGCTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAAGPA*PGPAPP Trigger: AGGAGGAGCAGGCCCAGGCAATGCAGGCCCGGCAGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | TGGCTGGCAGCAAACACAGCTGGGTCGAAGTGGCAGGTCTCTGAGTaGCCATTGCAGTCACACCTTTGGCACTCGTGGGTGTCCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: WLAANTAGSKWQVSE*PLQSHLWHSWVSWP Trigger: GGGCCAGGACACCCACGAGTGCCAAAGGTGTGACTGCAATGGGCACTCAGAGACCTGCCACTTCGACCCAGCTGTGTTTGCTGCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | AGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTTaGACACACACTGGCCCGTCAGTCGGTCACAGGGAGCTCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: SQACKGRSALLARTL*THTGPSVGHRELPG Trigger: TCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | GTGAGCCCGGTGAAGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTTaGACGTACTCTTTGCACACACACTGGCCCGTCAGTCGGTCACAG | + |
Preference number: 5 (lower is better) Translates to: VSPVKPGLQRSQRSP*TYSLHTHWPVSRSQ Trigger: CTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCACCGGGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | GGCCAGTACCCTGCATTGTGTCCTGAGCTTCCTGCAGAGCCACGGTaGCCTGCCGAAGGTTCCCGACCACATCATCTACCTGCCCTTCCA | + |
Preference number: 5 (lower is better) Translates to: GQYPALCPELPAEPR*PAEGSRPHHLPALP Trigger: TGGAAGGGCAGGTAGATGATGTGGTCGGGAACCTTCGGCAGGGCACCGTGGCTCTGCAGGAAGCTCAGGACACAATGCAGGGTACTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | AGGTTAAGTTGGACCTTTCCCCCAGTCAGATGCCCATTAGGCCTCTaGGACAAGGGCCGGCACCGGACGTCCTGCCAGTTCTTGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: RLSWTFPPVRCPLGL*DKGRHRTSCQFLGW Trigger: CCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAGGCCTAATGGGCATCTGACTGGGGGAAAGGTCCAACTTAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | AAGCGGCTGGTACTCACCTGGGTCTCAAGGCGCTGGGCATCGGCTTaGACCCTTGATGCTGCTTCCTCGGCTGCCCTGATCATTTGCCTG | + |
Preference number: 5 (lower is better) Translates to: KRLVLTWVSRRWASA*TLDAASSAALIICL Trigger: CAGGCAAATGATCAGGGCAGCCGAGGAAGCAGCATCAAGGGTCCAAGCCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GTGCGCTGGACATCTTCCTCCATCAGCAAGCGGCTGGTACTCACCTaGGTCTCAAGGCGCTGGGCATCGGCTTGGACCCTTGATGCTGCT | + |
Preference number: 5 (lower is better) Translates to: VRWTSSSISKRLVLT*VSRRWASAWTLDAA Trigger: AGCAGCATCAAGGGTCCAAGCCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTTGCTGATGGAGGAAGATGTCCAGCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GAGTCTGTGGGCAGCCAGAGAGCCAGCACTGCCTCGCTGACCTGTTaGATGGTGGCTGCATCTGTGTCAGGATCTGTGAGAAAGCCCCGG | + |
Preference number: 5 (lower is better) Translates to: ESVGSQRASTASLTC*MVAASVSGSVRKPR Trigger: CCGGGGCTTTCTCACAGATCCTGACACAGATGCAGCCACCATCCAACAGGTCAGCGAGGCAGTGCTGGCTCTCTGGCTGCCCACAGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCCTCGGGAGCAGGCTaGCTGGGCACACAGGAAGCC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPSGAG*LGTQEA Trigger: GGCTTCCTGTGTGCCCAGCAAGCCTGCTCCCGAGGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CCCATTGCAGTCACACCTTTGGCACTCGTGGGTGTCCTGGCCCTCTaGAGGTCTCCATGGACGGTTGTTGTAGAAAGGGGCACAGCGGTC | + |
Preference number: 5 (lower is better) Translates to: PIAVTPLALVGVLAL*RSPWTVVVERGTAV Trigger: GACCGCTGTGCCCCTTTCTACAACAACCGTCCATGGAGACCTGCAGAGGGCCAGGACACCCACGAGTGCCAAAGGTGTGACTGCAATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | TGTGGCCACGTGTCCATAGGTCTGGTCAGGACACTGGCGGATGGCTaGAGAACTACACGTGAGGCCGCCAAACCCTTCCCGACAAGGACA | + |
Preference number: 5 (lower is better) Translates to: CGHVSIGLVRTLADG*RTTREAAKPFPTRT Trigger: TGTCCTTGTCGGGAAGGGTTTGGCGGCCTCACGTGTAGTTCTGCAGCCATCCGCCAGTGTCCTGACCAGACCTATGGACACGTGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CTGGGCCTGCTCCTCCTGGGCCTGACGGCGAAGCTCCTTCATCCGTaGCCAGAATCCACTCATCTGTTCCTTCATGCCTTTCACCAGCCT | + |
Preference number: 5 (lower is better) Translates to: LGLLLLGLTAKLLHP*PESTHLFLHAFHQP Trigger: AGGCTGGTGAAAGGCATGAAGGAACAGATGAGTGGATTCTGGGCACGGATGAAGGAGCTTCGCCGTCAGGCCCAGGAGGAGCAGGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GGCTCGAAGAAGCTGAGTCCTTCCAATGAGCAAGTCCCCCACAGGTaGATAACAGGCCCCTCGGGAGCAGGCTTGCTGGGCACACAGGAA | + |
Preference number: 5 (lower is better) Translates to: GSKKLSPSNEQVPHR*ITGPSGAGLLGTQE Trigger: TTCCTGTGTGCCCAGCAAGCCTGCTCCCGAGGGGCCTGTTATCCACCTGTGGGGGACTTGCTCATTGGAAGGACTCAGCTTCTTCGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | ACACCTTTGGCACTCGTGGGTGTCCTGGCCCTCTGCAGGTCTCCATaGACGGTTGTTGTAGAAAGGGGCACAGCGGTCACAATTGGGGCC | + |
Preference number: 5 (lower is better) Translates to: TPLALVGVLALCRSP*TVVVERGTAVTIGA Trigger: GGCCCCAATTGTGACCGCTGTGCCCCTTTCTACAACAACCGTCCATGGAGACCTGCAGAGGGCCAGGACACCCACGAGTGCCAAAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TCGGTGTGGTCCCGGCAGTTGTCACACACACCTCCATTTGTCCCCTaGCTGGCAGCAAACACAGCTGGGTCGAAGTGGCAGGTCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: SVWSRQLSHTPPFVP*LAANTAGSKWQVSE Trigger: CTCAGAGACCTGCCACTTCGACCCAGCTGTGTTTGCTGCCAGCCAGGGGACAAATGGAGGTGTGTGTGACAACTGCCGGGACCACACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTTGCACACACACTaGCCCGTCAGTCGGTCACAGGGAGCTCCCTGGACTGCTCCATCT | + |
Preference number: 5 (lower is better) Translates to: QRSQRSPCTYSLHTH*PVSRSQGAPWTAPS Trigger: AGATGGAGCAGTCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GCTGCTTCCTCGGCTGCCCTGATCATTTGCCTGGTCTGCTGGAGCTaGGTGTTGAAGTTTCGTAGCTGCTCAGCTACCCGCCCTGCCATG | + |
Preference number: 5 (lower is better) Translates to: AASSAALIICLVCWS*VLKFRSCSATRPAM Trigger: CATGGCAGGGCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGAAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCACGTCCTGCCAGTTCTaGGGCTGGCCCTGGTGGACC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCTSCQF*GWPWWT Trigger: GGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTGACCTCGTTGGCATaGGTCACAGCGGGGCCCGGT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVTSLA*VTAGPG Trigger: ACCGGGCCCCGCTGTGACCAATGCCAACGAGGTCAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCATGTGGAAGGCCCCTTaGGCTCTGGGCAGGGCTCCC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCMWKAP*ALGRAP Trigger: GGGAGCCCTGCCCAGAGCCAAAGGGGCCTTCCACAT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GTGAGGCCGCCAAACCCTTCCCGACAAGGACACTGTCCTGTAAACTaGTTGCACTGGGAGCTTAGGGAGTTGCGAGGGTCACAGGCACAG | + |
Preference number: 5 (lower is better) Translates to: VRPPNPSRQGHCPVN*LHWELRELRGSQAQ Trigger: CTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACAGTGTCCTTGTCGGGAAGGGTTTGGCGGCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TCTGTGAGAAAGCCCCGGACCTGTTGGATGAGAAGCCGTGTGCGCTaGACATCTTCCTCCATCAGCAAGCGGCTGGTACTCACCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: SVRKPRTCWMRSRVR*TSSSISKRLVLTWV Trigger: GACCCAGGTGAGTACCAGCCGCTTGCTGATGGAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTTCTCACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TTTTGCTTAAGTCTCTTAAAGCCCTCCTGGGCATTCATTGCCTGCTaGCTGGCACCCTCTGCAAGCTGCCGGGCCTGCATTGCCTGGGCC | + |
Preference number: 5 (lower is better) Translates to: FCLSLLKPSWAFIAC*LAPSASCRACIAWA Trigger: GGCCCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAAGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTCCTGGGCATTCATaGCCTGCTGGCTGGCACCCT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPPGHS*PAGWHP Trigger: AGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | GTCCCTCAACTGGCTCAGCAGGCTAGAACTGTCAGACACTTGCTGTaGAGCCCGGGAGGACTGCTCATAAGCCATGGTCAGCATGCGGAA | + |
Preference number: 5 (lower is better) Translates to: VPQLAQQARTVRHLL*SPGGLLISHGQHAE Trigger: TTCCGCATGCTGACCATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAGTGTCTGACAGTTCTAGCCTGCTGAGCCAGTTGAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | ATCATTTGCCTGGTCTGCTGGAGCTGGGTGTTGAAGTTTCGTAGCTaGTCAGCTACCCGCCCTGCCATGTGGAAGGCCCCTTTGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: IICLVCWSWVLKFRS*SATRPAMWKAPLAL Trigger: CAGAGCCAAAGGGGCCTTCCACATGGCAGGGCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | ACCCTTGATGCTGCTTCCTCGGCTGCCCTGATCATTTGCCTGGTCTaGTGGAGCTGGGTGTTGAAGTTTCGTAGCTGCTCAGCTACCCGC | + |
Preference number: 5 (lower is better) Translates to: TLDAASSAALIICLV*WSWVLKFRSCSATR Trigger: GCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGAAGCAGCATCAAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CTGGCCCGTCAGTCGGTCACAGGGAGCTCCCTGGACTGCTCCATCTaGATCACACTCACAGGGAATACAAGTCTCATGAATGGGAGCGCT | + |
Preference number: 5 (lower is better) Translates to: LARQSVTGSSLDCSI*ITLTGNTSLMNGSA Trigger: AGCGCTCCCATTCATGAGACTTGTATTCCCTGTGAGTGTGATCCAGATGGAGCAGTCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CTTGATGCTGCTTCCTCGGCTGCCCTGATCATTTGCCTGGTCTGCTaGAGCTGGGTGTTGAAGTTTCGTAGCTGCTCAGCTACCCGCCCT | + |
Preference number: 5 (lower is better) Translates to: LDAASSAALIICLVC*SWVLKFRSCSATRP Trigger: AGGGCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGAAGCAGCATCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TGGGATAGCACTGAGTCCACATTAGGGAGCCTGGCCGCAATGGCCTaGATCTCTTTCATCTTGCGCAGCACTGTGGCTGAGTCTGTGGGC | + |
Preference number: 5 (lower is better) Translates to: WDSTESTLGSLAAMA*ISFILRSTVAESVG Trigger: GCCCACAGACTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCAGGCCATTGCGGCCAGGCTCCCTAATGTGGACTCAGTGCTATCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGGAGCTTAGGGAGTaGCGAGGGTCACAGGCACAG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWELRE*RGSQAQ Trigger: CTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCAACGGCCTGAGGCTTaGTCACAGCCAGGACCCTCT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCQRPEA*SQPGPS Trigger: AGAGGGTCCTGGCTGTGACAAAGCCTCAGGCCGTTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTCACAGTGACCTCGTaGGCATTGGTCACAGCGGGG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVTVTS*ALVTAG Trigger: CCCCGCTGTGACCAATGCCAACGAGGTCACTGTGAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGCTGCCCTGATCATTaGCCTGGTCTGCTGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGCPDH*PGLLEL Trigger: CAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCATCGGCTTGGACCCTaGATGCTGCTTCCTCGGCTG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHRLGP*MLLPRL Trigger: CAGCCGAGGAAGCAGCATCAAGGGTCCAAGCCGATG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAAAGCCCCGGACCTGTaGGATGAGAAGCCGTGTGCG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCKAPDL*DEKPCA Trigger: CGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | CAGCTGGTACAAGGACCTGCTGAACCTCACCAACCCTTTCCTGGATaGGCCGAAGAGAGCGGCCAGTACCCTGCATTGTGTCCTGAGCTT | + |
Preference number: 5 (lower is better) Translates to: QLVQGPAEPHQPFPG*AEESGQYPALCPEL Trigger: AAGCTCAGGACACAATGCAGGGTACTGGCCGCTCTCTTCGGCTCATCCAGGAAAGGGTTGGTGAGGTTCAGCAGGTCCTTGTACCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | CGCTTCTCCAGCCCCGACAGGTCTGCAGAGCGCAGCATGATAGCCTaGCTCCCTCGAAGCAGCTCTGACTCCATGTCTTTCATTTTGTCC | + |
Preference number: 5 (lower is better) Translates to: RFSSPDRSAERSMIA*LPRSSSDSMSFILS Trigger: GGACAAAATGAAAGACATGGAGTCAGAGCTGCTTCGAGGGAGTCAGGCTATCATGCTGCGCTCTGCAGACCTGTCGGGGCTGGAGAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | TTGGGGCCAGCTGTGTTATGCTGGCAGACACAGACATTGTTGACCTaGACAGCAGTGGTAGAACCTCCAGGATTAGGGGCACAGCGGTCG | + |
Preference number: 5 (lower is better) Translates to: LGPAVLCWQTQTLLT*TAVVEPPGLGAQRS Trigger: CGACCGCTGTGCCCCTAATCCTGGAGGTTCTACCACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | TCGGCTTGGACCCTTGATGCTGCTTCCTCGGCTGCCCTGATCATTTaGCTGGTCTGCTGGAGCTGGGTGTTGAAGTTTCGTAGCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: SAWTLDAASSAALII*LVCWSWVLKFRSCS Trigger: TGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGAAGCAGCATCAAGGGTCCAAGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | TACTTTTGCTTAAGTCTCTTAAAGCCCTCCTGGGCATTCATTGCCTaGTGGCTGGCACCCTCTGCAAGCTGCCGGGCCTGCATTGCCTGG | + |
Preference number: 5 (lower is better) Translates to: YFCLSLLKPSWAFIA*WLAPSASCRACIAW Trigger: CCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAAGCAAAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GCAGAGAGACAGGGCTCACATCATTCTGTGACTGCCACCAGCGCATaGGGCCTGAAGACGATGCGACATTCTCCACTCGGTGACTGTTGT | + |
Preference number: 5 (lower is better) Translates to: AERQGSHHSVTATSA*GLKTMRHSPLGDCC Trigger: ACAACAGTCACCGAGTGGAGAATGTCGCATCGTCTTCAGGCCCCATGCGCTGGTGGCAGTCACAGAATGATGTGAGCCCTGTCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TGGTGGACCTGGGGAAAGGTGCTGGCACAGTCTGTCGCCAGGTACTaGTACACCCTCCATGTCTTGCCAAAGTCAGAAGAGCGCTCAATC | + |
Preference number: 5 (lower is better) Translates to: WWTWGKVLAQSVARY*YTLHVLPKSEERSI Trigger: GATTGAGCGCTCTTCTGACTTTGGCAAGACATGGAGGGTGTACCAGTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TGTCAGACACTTGCTGTGCAGCCCGGGAGGACTGCTCATAAGCCATaGTCAGCATGCGGAAGGCTCCTGAAGGGTCTTCACTGCTTAGCT | + |
Preference number: 5 (lower is better) Translates to: CQTLAVQPGRTAHKP*SACGRLLKGLHCLA Trigger: AGCTAAGCAGTGAAGACCCTTCAGGAGCCTTCCGCATGCTGACCATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAGTGTCTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | GTGGCTGCATCTGTGTCAGGATCTGTGAGAAAGCCCCGGACCTGTTaGATGAGAAGCCGTGTGCGCTGGACATCTTCCTCCATCAGCAAG | + |
Preference number: 5 (lower is better) Translates to: VAASVSGSVRKPRTC*MRSRVRWTSSSISK Trigger: CTTGCTGATGGAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTTCTCACAGATCCTGACACAGATGCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGCACAGGGGCCAGCTaGGTGAAGTTGACTCTCAAG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGTGAS*VKLTLK Trigger: CTTGAGAGTCAACTTCACCAAGCTGGCCCCTGTGCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCACACACACCTCCATTaGTCCCCTGGCTGGCAGCAA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCHTHLH*SPGWQQ Trigger: TTGCTGCCAGCCAGGGGACAAATGGAGGTGTGTGTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCCTTGCACGTACTCTTaGCACACACACTGGCCCGTC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCPCTYS*HTHWPV Trigger: GACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTCGCAGCGCTCTCCTaGCACGTACTCTTTGCACAC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVAALS*HVLFAH Trigger: GTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCACACTGGTCACATTaGGGGCCCACTACATTGGGC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCAHWSH*GPTTLG Trigger: GCCCAATGTAGTGGGCCCCAAATGTGACCAGTGTGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGCCTCGCTGACCTGTaGGATGGTGGCTGCATCTGT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCCLADL*DGGCIC Trigger: ACAGATGCAGCCACCATCCAACAGGTCAGCGAGGCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGGCCAGTACCCTGCATaGTGTCCTGAGCTTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCGQYPA*CPELPA Trigger: TGCAGGAAGCTCAGGACACAATGCAGGGTACTGGCC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | TCCTTCATGCCTTTCACCAGCCTTTCAGCTGGTACAAGGACCTGCTaGACCTCACCAACCCTTTCCTGGATGAGCCGAAGAGAGCGGCCA | + |
Preference number: 5 (lower is better) Translates to: SFMPFTSLSAGTRTC*TSPTLSWMSRRERP Trigger: TGGCCGCTCTCTTCGGCTCATCCAGGAAAGGGTTGGTGAGGTTCAGCAGGTCCTTGTACCAGCTGAAAGGCTGGTGAAAGGCATGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | GTCGTCTATTCCGGAAATAGTGTAGCTGACAGCGCTCGCAGTTCTTaGCCTCGGTGTGGTCCCGGCAGTTGTCACACACACCTCCATTTG | + |
Preference number: 5 (lower is better) Translates to: VVYSGNSVADSARSS*PRCGPGSCHTHLHL Trigger: CAAATGGAGGTGTGTGTGACAACTGCCGGGACCACACCGAGGGCAAGAACTGCGAGCGCTGTCAGCTACACTATTTCCGGAATAGACGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TCTTTGCACACACACTGGCCCGTCAGTCGGTCACAGGGAGCTCCCTaGACTGCTCCATCTGGATCACACTCACAGGGAATACAAGTCTCA | + |
Preference number: 5 (lower is better) Translates to: SLHTHWPVSRSQGAP*TAPSGSHSQGIQVS Trigger: TGAGACTTGTATTCCCTGTGAGTGTGATCCAGATGGAGCAGTCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TGCTCAATCTTGCTCTTGGCATCTAGCAACCGAGAAGCCAGGCCATaGTCTTCCAGACCTGTCCCTGTCCACAGGCCTTCGGTGGCATTA | + |
Preference number: 5 (lower is better) Translates to: CSILLLASSNREARP*SSRPVPVHRPSVAL Trigger: TAATGCCACCGAAGGCCTGTGGACAGGGACAGGTCTGGAAGACCATGGCCTGGCTTCTCGGTTGCTAGATGCCAAGAGCAAGATTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTCTCTGAGTGCCCATaGCAGTCACACCTTTGGCAC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVSECP*QSHLWH Trigger: GTGCCAAAGGTGTGACTGCAATGGGCACTCAGAGAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGTGTGGTCCCGGCAGTaGTCACACACACCTCCATTT | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCVWSRQ*SHTPPF Trigger: AAATGGAGGTGTGTGTGACAACTGCCGGGACCACAC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CTTGCTGTGCAGCCCGGGAGGACTGCTCATAAGCCATGGTCAGCATaGGGAAGGCTCCTGAAGGGTCTTCACTGCTTAGCTTCTCAAATT | + |
Preference number: 5 (lower is better) Translates to: LAVQPGRTAHKPWSA*GRLLKGLHCLASQI Trigger: AATTTGAGAAGCTAAGCAGTGAAGACCCTTCAGGAGCCTTCCGCATGCTGACCATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCAGCCTGGAGTCACACTaGCAGCATTTCATCTGCCAC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSLESH*QHFICH Trigger: GTGGCAGATGAAATGCTGCAAGTGTGACTCCAGGCT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGCAGACACAGACATaGTTGACCTGCACAGCAGTG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWQTQT*LTCTAV Trigger: CACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGTCCTGTAAACTGGTaGCACTGGGAGCTTAGGGAG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCCPVNW*HWELRE Trigger: CTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGCTGGAGCTGGGTGTaGAAGTTTCGTAGCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCCWSWV*KFRSCS Trigger: TGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGGATCTCTTTCATCTaGCGCAGCACTGTGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCWISFI*RSTVAE Trigger: CTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCTGCCACAAAGCTTGTaGATGGTGGGTGTCAAGTCA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCLPQSL*MVGVKS Trigger: TGACTTGACACCCACCATCAACAAGCTTTGTGGCAG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCCTCTGCCTCCATCTaGATGCTCAGGATTCGATTG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSSASI*MLRIRL Trigger: CAATCGAATCCTGAGCATCAAGATGGAGGCAGAGGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CTGGATCACACTCACAGGGAATACAAGTCTCATGAATGGGAGCGCTaGGTCGTCTATTCCGGAAATAGTGTAGCTGACAGCGCTCGCAGT | + |
Preference number: 5 (lower is better) Translates to: LDHTHREYKSHEWER*VVYSGNSVADSARS Trigger: ACTGCGAGCGCTGTCAGCTACACTATTTCCGGAATAGACGACCCAGCGCTCCCATTCATGAGACTTGTATTCCCTGTGAGTGTGATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | TCCTTCAACTCTGTATACTTTTGCTTAAGTCTCTTAAAGCCCTCCTaGGCATTCATTGCCTGCTGGCTGGCACCCTCTGCAAGCTGCCGG | + |
Preference number: 5 (lower is better) Translates to: SFNSVYFCLSLLKPS*AFIACWLAPSASCR Trigger: CCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAAGCAAAAGTATACAGAGTTGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCATCCATAAGGTTAAGTaGGACCTTTCCCCCAGTCAG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCIHKVK*DLSPSQ Trigger: CTGACTGGGGGAAAGGTCCAACTTAACCTTATGGAT...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGCCAGCTTGGTGAAGTaGACTCTCAAGTTTGTGATG | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCASLVK*TLKFVM Trigger: CATCACAAACTTGAGAGTCAACTTCACCAAGCTGGC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTGCTCAATCTTGCTCTaGGCATCTAGCAACCGAGAA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCCSILL*ASSNRE Trigger: TTCTCGGTTGCTAGATGCCAAGAGCAAGATTGAGCA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | AACATGCCAGCTGGTGTGAGACCCTTAAAATCCATCATGATGTCCTaGAGCTGCATCCTCTTGTCTAGGTCCAGCTGCAGAGAGACAGGG | + |
Preference number: 5 (lower is better) Translates to: NMPAGVRPLKSIMMS*SCILLSRSSCRETG Trigger: CCCTGTCTCTCTGCAGCTGGACCTAGACAAGAGGATGCAGCTTCAGGACATCATGATGGATTTTAAGGGTCTCACACCAGCTGGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS TCA 90 bp | TTGATGCTCAGGATTCGATTGCCTTGCTCGCCCAGCACAGGACTCTaGCCCAGCCGGTCCTTCAACTCTGTATACTTTTGCTTAAGTCTC | + |
Preference number: 5 (lower is better) Translates to: LMLRIRLPCSPSTGL*PSRSFNSVYFCLSL Trigger: GAGACTTAAGCAAAAGTATACAGAGTTGAAGGACCGGCTGGGTCAGAGTCCTGTGCTGGGCGAGCAAGGCAATCGAATCCTGAGCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 90 bp | ACATCCTGCTCTGTGACAGAAGTGCCTTCCAGAATCTGTCTGATCTaGTCAATCTTGCTCTTGGCATCTAGCAACCGAGAAGCCAGGCCA | + |
Preference number: 5 (lower is better) Translates to: TSCSVTEVPSRICLI*SILLLASSNREARP Trigger: TGGCCTGGCTTCTCGGTTGCTAGATGCCAAGAGCAAGATTGAGCAGATCAGACAGATTCTGGAAGGCACTTCTGTCACAGAGCAGGATGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 90 bp | ATATTGGGTGCAATAGGTCTCAGGTTTGGTCAATCCACAGGTAGATaGGGCTCGAAGAAGCTGAGTCCTTCCAATGAGCAAGTCCCCCAC | + |
Preference number: 5 (lower is better) Translates to: ILGAIGLRFGQSTGR*GSKKLSPSNEQVPH Trigger: GTGGGGGACTTGCTCATTGGAAGGACTCAGCTTCTTCGAGCCTCATCTACCTGTGGATTGACCAAACCTGAGACCTATTGCACCCAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 90 bp | CCACTCGGTGACTGTTGTAATTTCGAGGCAGCCTGGAGTCACACTTaGAGCATTTCATCTGCCACTGTCCATATTGGGTGCAATAGGTCT | + |
Preference number: 5 (lower is better) Translates to: PLGDCCNFEAAWSHT*SISSATVHIGCNRS Trigger: AGACCTATTGCACCCAATATGGACAGTGGCAGATGAAATGCTGCAAGTGTGACTCCAGGCTGCCTCGAAATTACAACAGTCACCGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCTCCATGTCTTTCATTTaGTCCATCATTTCCATGGTC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCSMSFI*SIISMV Trigger: GACCATGGAAATGATGGACAAAATGAAAGACATGGA...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 90 bp | CCATGTCTTGCCAAAGTCAGAAGAGCGCTCAATCAACATGCCAGCTaGTGTGAGACCCTTAAAATCCATCATGATGTCCTGAAGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: PCLAKVRRALNQHAS*CETLKIHHDVLKLH Trigger: ATGCAGCTTCAGGACATCATGATGGATTTTAAGGGTCTCACACCAGCTGGCATGTTGATTGAGCGCTCTTCTGACTTTGGCAAGACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCGATGTCCCCAAGTTCTaGAATCTTTTTACTTTGAGA | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCDVPKF*NLFTLR Trigger: TCTCAAAGTAAAAAGATTCAAGAACTTGGGGACATC...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS-3UTR CAA 90 bp | CAGGGTGACCAGTCTATGCTATCAATGGTGGAGACATTCCCCTCCCCAGTGTGCCAACTCTGTATACTTTaGCTTAAGTCTCTTAAAGCC | + |
Preference number: 5 (lower is better) Translates to: QGDQSMLSMVETFPSPVCQLCIL*LKSLKA Trigger: GGCTTTAAGAGACTTAAGCAAAAGTATACAGAGTTG...GCACACTGGGGAGGGGAATGTCTCCACCATTGATAGCATAGACTGGTCACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CTGGCTGGCACCCTCTGCAAGCTGCCGGGCCTGCATTaGCTGGGCCTGCTCCTCCTGGGCCTGACGGCGAAG | + |
Preference number: 6 (lower is better) Translates to: LAGTLCKLPGLH*LGLLLLGLTAK Trigger: CTTCGCCGTCAGGCCCAGGAGGAGCAGGCCCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TTAGGCCTCTGGGACAAGGGCCGGCACCGGACGTCCTaGCAGTTCTTGGGCTGGCCCTGGTGGACCTGGGGA | + |
Preference number: 6 (lower is better) Translates to: LGLWDKGRHRTS*QFLGWPWWTWG Trigger: TCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAGGCCTAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | AAGGGCCGGCACCGGACGTCCTGCCAGTTCTTGGGCTaGCCCTGGTGGACCTGGGGAAAGGTGCTGGCACAG | + |
Preference number: 6 (lower is better) Translates to: KGRHRTSCQFLG*PWWTWGKVLAQ Trigger: CTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GCGTGGGCTCGGCTTCTGGCCTGCTCAGCCTCAGCCTaGAGCCTGCGGGCCCGTGCGATGTCTTGTTTGGTC | + |
Preference number: 6 (lower is better) Translates to: AWARLLACSASA*SLRARAMSCLV Trigger: GACCAAACAAGACATCGCACGGGCCCGCAGGCTCCAGGCTGAGGCTGAGCAGGCCAGAAGCCGAGCCCACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CTCCTGGGCATTCATTGCCTGCTGGCTGGCACCCTCTaGAAGCTGCCGGGCCTGCATTGCCTGGGCCTGCTC | + |
Preference number: 6 (lower is better) Translates to: LLGIHCLLAGTL*KLPGLHCLGLL Trigger: GAGCAGGCCCAGGCAATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TTAGGCCTCTGGGACAAGGGCCGGCACCGGACGTCCTGCCAGTTCTaGGGCTGGCCCTGGTGGACCTGGGGAAAGGTGCTGGCACAGTCT | + |
Preference number: 6 (lower is better) Translates to: LGLWDKGRHRTSCQF*GWPWWTWGKVLAQS Trigger: AGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAGGCCTAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS TCA 72 bp | GGGCCCGGTAAAGCCAGGGCGGCAGAGGCAACGGCCTaGGGCTTTGTCACAGCCAGGACCCTCTGTTCCTCT | + |
Preference number: 6 (lower is better) Translates to: GPGKARAAEATA*GFVTARTLCSS Trigger: AGAGGAACAGAGGGTCCTGGCTGTGACAAAGCCTCAGGCCGTTGCCTCTGCCGCCCTGGCTTTACCGGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GTGCCCTGCCGAAGGTTCCCGACCACATCATCTACCTaGCCTTCCACAGCGTGGGCTCGGCTTCTGGCCTGC | + |
Preference number: 6 (lower is better) Translates to: VPCRRFPTTSST*PSTAWARLLAC Trigger: GCAGGCCAGAAGCCGAGCCCACGCTGTGGAAGGGCAGGTAGATGATGTGGTCGGGAACCTTCGGCAGGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | GCAGGCCACACATACTGGGTAGCGGTCACAGTGACCTCGTTGGCATaGGTCACAGCGGGGCCCGGTAAAGCCAGGGCGGCAGAGGCAACG | + |
Preference number: 6 (lower is better) Translates to: AGHTYWVAVTVTSLA*VTAGPGKARAAEAT Trigger: CGTTGCCTCTGCCGCCCTGGCTTTACCGGGCCCCGCTGTGACCAATGCCAACGAGGTCACTGTGACCGCTACCCAGTATGTGTGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | GGAGTGGCAGGCCACACATACTGGGTAGCGGTCACAGTGACCTCGTaGGCATTGGTCACAGCGGGGCCCGGTAAAGCCAGGGCGGCAGAG | + |
Preference number: 6 (lower is better) Translates to: GVAGHTYWVAVTVTS*ALVTAGPGKARAAE Trigger: CTCTGCCGCCCTGGCTTTACCGGGCCCCGCTGTGACCAATGCCAACGAGGTCACTGTGACCGCTACCCAGTATGTGTGGCCTGCCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TGGACCTTTCCCCCAGTCAGATGCCCATTAGGCCTCTaGGACAAGGGCCGGCACCGGACGTCCTGCCAGTTC | + |
Preference number: 6 (lower is better) Translates to: WTFPPVRCPLGL*DKGRHRTSCQF Trigger: GAACTGGCAGGACGTCCGGTGCCGGCCCTTGTCCCAGAGGCCTAATGGGCATCTGACTGGGGGAAAGGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CAA 90 bp | CGGGGCCCGGTAAAGCCAGGGCGGCAGAGGCAACGGCCTGAGGCTTaGTCACAGCCAGGACCCTCTGTTCCTCTGAAGTCACAGTCACAA | + |
Preference number: 6 (lower is better) Translates to: RGPVKPGRQRQRPEA*SQPGPSVPLKSQSQ Trigger: TTGTGACTGTGACTTCAGAGGAACAGAGGGTCCTGGCTGTGACAAAGCCTCAGGCCGTTGCCTCTGCCGCCCTGGCTTTACCGGGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | AGTTCTTGGGCTGGCCCTGGTGGACCTGGGGAAAGGTaGTGGCACAGTCTGTCGCCAGGTACTGGTACACCC | + |
Preference number: 6 (lower is better) Translates to: SSWAGPGGPGER*WHSLSPGTGTP Trigger: GGGTGTACCAGTACCTGGCGACAGACTGTGCCAGCACCTTTCCCCAGGTCCACCAGGGCCAGCCCAAGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | AGCAAGCGGCTGGTACTCACCTGGGTCTCAAGGCGCTaGGCATCGGCTTGGACCCTTGATGCTGCTTCCTCG | + |
Preference number: 6 (lower is better) Translates to: SKRLVLTWVSRR*ASAWTLDAASS Trigger: CGAGGAAGCAGCATCAAGGGTCCAAGCCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GTGTGCGCTGGACATCTTCCTCCATCAGCAAGCGGCTaGTACTCACCTGGGTCTCAAGGCGCTGGGCATCGG | + |
Preference number: 6 (lower is better) Translates to: VCAGHLPPSASG*YSPGSQGAGHR Trigger: CCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTTGCTGATGGAGGAAGATGTCCAGCGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | ACATACTGGGTAGCGGTCACAGTGACCTCGTTGGCATaGGTCACAGCGGGGCCCGGTAAAGCCAGGGCGGCA | + |
Preference number: 6 (lower is better) Translates to: TYWVAVTVTSLA*VTAGPGKARAA Trigger: TGCCGCCCTGGCTTTACCGGGCCCCGCTGTGACCAATGCCAACGAGGTCACTGTGACCGCTACCCAGTATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGCCACACATACTGGGTAGCGGTCACAGTGACCTCGTaGGCATTGGTCACAGCGGGGCCCGGTAAAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: GHTYWVAVTVTS*ALVTAGPGKAR Trigger: CCTGGCTTTACCGGGCCCCGCTGTGACCAATGCCAACGAGGTCACTGTGACCGCTACCCAGTATGTGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGGAGCCTGGCCGCAATGGCCTGGATCTCTTTCATCTaGCGCAGCACTGTGGCTGAGTCTGTGGGCAGCCAG | + |
Preference number: 6 (lower is better) Translates to: GSLAAMAWISFI*RSTVAESVGSQ Trigger: CTGGCTGCCCACAGACTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCAGGCCATTGCGGCCAGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TCTTGCCCTCGGTGTGGTCCCGGCAGTTGTCACACACACCTCCATTaGTCCCCTGGCTGGCAGCAAACACAGCTGGGTCGAAGTGGCAGG | + |
Preference number: 6 (lower is better) Translates to: SCPRCGPGSCHTHLH*SPGWQQTQLGRSGR Trigger: CCTGCCACTTCGACCCAGCTGTGTTTGCTGCCAGCCAGGGGACAAATGGAGGTGTGTGTGACAACTGCCGGGACCACACCGAGGGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | AAGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTaGCACACACACTGGCCCGTCAGTCGGTCACAGGGAGCTCCCTGG | + |
Preference number: 6 (lower is better) Translates to: KPGLQRSQRSPCTYS*HTHWPVSRSQGAPW Trigger: CCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | GGTGAGCCCGGTGAAGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTaGCACGTACTCTTTGCACACACACTGGCCCGTCAGTCGGTCACA | + |
Preference number: 6 (lower is better) Translates to: GEPGEARLAKVAALS*HVLFAHTLARQSVT Trigger: TGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCACCGGGCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TGGCAGCCCTTCGGGTTGGCGAAGGTGAGCCCGGTGAAGCCAGGCTaGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTTGCACACA | + |
Preference number: 6 (lower is better) Translates to: WQPFGLAKVSPVKPG*QRSQRSPCTYSLHT Trigger: TGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCACCGGGCTCACCTTCGCCAACCCGAAGGGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | GGTCAGGACACTGGCGGATGGCTGCAGAACTACACGTaGGGCCGCCAAACCCTTCCCGACAAGGACACTGTC | + |
Preference number: 6 (lower is better) Translates to: GQDTGGWLQNYT*GRQTLPDKDTV Trigger: GACAGTGTCCTTGTCGGGAAGGGTTTGGCGGCCTCACGTGTAGTTCTGCAGCCATCCGCCAGTGTCCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | GGCCTGGATCTCTTTCATCTTGCGCAGCACTGTGGCTaGGTCTGTGGGCAGCCAGAGAGCCAGCACTGCCTC | + |
Preference number: 6 (lower is better) Translates to: GLDLFHLAQHCG*VCGQPESQHCL Trigger: GAGGCAGTGCTGGCTCTCTGGCTGCCCACAGACTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GTGTCCATAGGTCTGGTCAGGACACTGGCGGATGGCTaGAGAACTACACGTGAGGCCGCCAAACCCTTCCCG | + |
Preference number: 6 (lower is better) Translates to: VSIGLVRTLADG*RTTREAAKPFP Trigger: CGGGAAGGGTTTGGCGGCCTCACGTGTAGTTCTGCAGCCATCCGCCAGTGTCCTGACCAGACCTATGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CTGGTCTGCTGGAGCTGGGTGTTGAAGTTTCGTAGCTaGTCAGCTACCCGCCCTGCCATGTGGAAGGCCCCT | + |
Preference number: 6 (lower is better) Translates to: LVCWSWVLKFRS*SATRPAMWKAP Trigger: AGGGGCCTTCCACATGGCAGGGCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GATCTGCTCCACACGCTTCTCCAGCCCCGACAGGTCTaGAGAGCGCAGCATGATAGCCTGACTCCCTCGAAG | + |
Preference number: 6 (lower is better) Translates to: DLLHTLLQPRQV*RAQHDSLTPSK Trigger: CTTCGAGGGAGTCAGGCTATCATGCTGCGCTCTGCAGACCTGTCGGGGCTGGAGAAGCGTGTGGAGCAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | AAGCTGAGTCCTTCCAATGAGCAAGTCCCCCACAGGTaGATAACAGGCCCCTCGGGAGCAGGCTTGCTGGGC | + |
Preference number: 6 (lower is better) Translates to: KLSPSNEQVPHR*ITGPSGAGLLG Trigger: GCCCAGCAAGCCTGCTCCCGAGGGGCCTGTTATCCACCTGTGGGGGACTTGCTCATTGGAAGGACTCAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCTGAGTGCCCATTGCAGTCACACCTTTGGCACTCGTaGGTGTCCTGGCCCTCTGCAGGTCTCCATGGACGG | + |
Preference number: 6 (lower is better) Translates to: SECPLQSHLWHS*VSWPSAGLHGR Trigger: CCGTCCATGGAGACCTGCAGAGGGCCAGGACACCCACGAGTGCCAAAGGTGTGACTGCAATGGGCACTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | CAGCGCTCTCCTTGCACGTACTCTTTGCACACACACTaGCCCGTCAGTCGGTCACAGGGAGCTCCCTGGACT | + |
Preference number: 6 (lower is better) Translates to: QRSPCTYSLHTH*PVSRSQGAPWT Trigger: AGTCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TGGAGCCTGCGGGCCCGTGCGATGTCTTGTTTGGTCTaGGATAGCACTGAGTCCACATTAGGGAGCCTGGCC | + |
Preference number: 6 (lower is better) Translates to: WSLRARAMSCLV*DSTESTLGSLA Trigger: GGCCAGGCTCCCTAATGTGGACTCAGTGCTATCCCAGACCAAACAAGACATCGCACGGGCCCGCAGGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | TTCGGGTTGGCGAAGGTGAGCCCGGTGAAGCCAGGCTaGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCT | + |
Preference number: 6 (lower is better) Translates to: FGLAKVSPVKPG*QRSQRSPCTYS Trigger: AGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCACCGGGCTCACCTTCGCCAACCCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | TGTCCTGTAAACTGGTTGCACTGGGAGCTTAGGGAGTaGCGAGGGTCACAGGCACAGGGCTCGCAGCCCAGG | + |
Preference number: 6 (lower is better) Translates to: CPVNWLHWELRE*RGSQAQGSQPR Trigger: CCTGGGCTGCGAGCCCTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGGCAGCCAGAGAGCCAGCACTGCCTCGCTGACCTGTaGGATGGTGGCTGCATCTGTGTCAGGATCTGTGAG | + |
Preference number: 6 (lower is better) Translates to: GQPESQHCLADL*DGGCICVRICE Trigger: CTCACAGATCCTGACACAGATGCAGCCACCATCCAACAGGTCAGCGAGGCAGTGCTGGCTCTCTGGCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | AGGCCGCCAAACCCTTCCCGACAAGGACACTGTCCTGTAAACTGGTaGCACTGGGAGCTTAGGGAGTTGCGAGGGTCACAGGCACAGGGC | + |
Preference number: 6 (lower is better) Translates to: RPPNPSRQGHCPVNW*HWELRELRGSQAQG Trigger: GCCCTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACAGTGTCCTTGTCGGGAAGGGTTTGGCGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GTCACACCTTTGGCACTCGTGGGTGTCCTGGCCCTCTaGAGGTCTCCATGGACGGTTGTTGTAGAAAGGGGC | + |
Preference number: 6 (lower is better) Translates to: VTPLALVGVLAL*RSPWTVVVERG Trigger: GCCCCTTTCTACAACAACCGTCCATGGAGACCTGCAGAGGGCCAGGACACCCACGAGTGCCAAAGGTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTTaGACACACACTGGCCCGTCAGTCGGTCACAGGGAG | + |
Preference number: 6 (lower is better) Translates to: CKGRSALLARTL*THTGPSVGHRE Trigger: CTCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CCTGCATTGTGTCCTGAGCTTCCTGCAGAGCCACGGTaGCCTGCCGAAGGTTCCCGACCACATCATCTACCT | + |
Preference number: 6 (lower is better) Translates to: PALCPELPAEPR*PAEGSRPHHLP Trigger: AGGTAGATGATGTGGTCGGGAACCTTCGGCAGGGCACCGTGGCTCTGCAGGAAGCTCAGGACACAATGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TTAAGTCTCTTAAAGCCCTCCTGGGCATTCATTGCCTaGTGGCTGGCACCCTCTGCAAGCTGCCGGGCCTGC | + |
Preference number: 6 (lower is better) Translates to: LSLLKPSWAFIA*WLAPSASCRAC Trigger: GCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GTCCCCTGGCTGGCAGCAAACACAGCTGGGTCGAAGTaGCAGGTCTCTGAGTGCCCATTGCAGTCACACCTT | + |
Preference number: 6 (lower is better) Translates to: VPWLAANTAGSK*QVSECPLQSHL Trigger: AAGGTGTGACTGCAATGGGCACTCAGAGACCTGCCACTTCGACCCAGCTGTGTTTGCTGCCAGCCAGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCCCGGCAGTTGTCACACACACCTCCATTTGTCCCCTaGCTGGCAGCAAACACAGCTGGGTCGAAGTGGCAG | + |
Preference number: 6 (lower is better) Translates to: SRQLSHTPPFVP*LAANTAGSKWQ Trigger: CTGCCACTTCGACCCAGCTGTGTTTGCTGCCAGCCAGGGGACAAATGGAGGTGTGTGTGACAACTGCCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GGTCTTCCAGACCTGTCCCTGTCCACAGGCCTTCGGTaGCATTACGGAGACTGTGAAGGCGTCGAGCTTGCT | + |
Preference number: 6 (lower is better) Translates to: GLPDLSLSTGLR*HYGDCEGVELA Trigger: AGCAAGCTCGACGCCTTCACAGTCTCCGTAATGCCACCGAAGGCCTGTGGACAGGGACAGGTCTGGAAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | CTTGCTGTGCAGCCCGGGAGGACTGCTCATAAGCCATaGTCAGCATGCGGAAGGCTCCTGAAGGGTCTTCAC | + |
Preference number: 6 (lower is better) Translates to: LAVQPGRTAHKP*SACGRLLKGLH Trigger: GTGAAGACCCTTCAGGAGCCTTCCGCATGCTGACCATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | ACATCTTCCTCCATCAGCAAGCGGCTGGTACTCACCTaGGTCTCAAGGCGCTGGGCATCGGCTTGGACCCTT | + |
Preference number: 6 (lower is better) Translates to: TSSSISKRLVLT*VSRRWASAWTL Trigger: AAGGGTCCAAGCCGATGCCCAGCGCCTTGAGACCCAGGTGAGTACCAGCCGCTTGCTGATGGAGGAAGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | AAGCCCCGGACCTGTTGGATGAGAAGCCGTGTGCGCTaGACATCTTCCTCCATCAGCAAGCGGCTGGTACTC | + |
Preference number: 6 (lower is better) Translates to: KPRTCWMRSRVR*TSSSISKRLVL Trigger: GAGTACCAGCCGCTTGCTGATGGAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GGCAGCCAGAGAGCCAGCACTGCCTCGCTGACCTGTTaGATGGTGGCTGCATCTGTGTCAGGATCTGTGAGA | + |
Preference number: 6 (lower is better) Translates to: GSQRASTASLTC*MVAASVSGSVR Trigger: TCTCACAGATCCTGACACAGATGCAGCCACCATCCAACAGGTCAGCGAGGCAGTGCTGGCTCTCTGGCTGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | AGTCTCTTAAAGCCCTCCTGGGCATTCATTGCCTGCTaGCTGGCACCCTCTGCAAGCTGCCGGGCCTGCATT | + |
Preference number: 6 (lower is better) Translates to: SLLKPSWAFIAC*LAPSASCRACI Trigger: AATGCAGGCCCGGCAGCTTGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGTGAAGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTaGCACGTACTCTTTGCACACACACTGGCCCGTCAG | + |
Preference number: 6 (lower is better) Translates to: GEARLAKVAALS*HVLFAHTLARQ Trigger: CTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | AAGATACTGCAGTCACAGGCATGGCAGCCCTTCGGGTaGGCGAAGGTGAGCCCGGTGAAGCCAGGCTTGCAA | + |
Preference number: 6 (lower is better) Translates to: KILQSQAWQPFG*AKVSPVKPGLQ Trigger: TTGCAAGCCTGGCTTCACCGGGCTCACCTTCGCCAACCCGAAGGGCTGCCATGCCTGTGACTGCAGTATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | CTCTGCCTCCATCTTGATGCTCAGGATTCGATTGCCTaGCTCGCCCAGCACAGGACTCTGACCCAGCCGGTC | + |
Preference number: 6 (lower is better) Translates to: LCLHLDAQDSIA*LAQHRTLTQPV Trigger: GACCGGCTGGGTCAGAGTCCTGTGCTGGGCGAGCAAGGCAATCGAATCCTGAGCATCAAGATGGAGGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TCCTCGGCTGCCCTGATCATTTGCCTGGTCTGCTGGAGCTGGGTGTaGAAGTTTCGTAGCTGCTCAGCTACCCGCCCTGCCATGTGGAAG | + |
Preference number: 6 (lower is better) Translates to: SSAALIICLVCWSWV*KFRSCSATRPAMWK Trigger: CTTCCACATGGCAGGGCGGGTAGCTGAGCAGCTACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | AGCCCCGACAGGTCTGCAGAGCGCAGCATGATAGCCTaGCTCCCTCGAAGCAGCTCTGACTCCATGTCTTTC | + |
Preference number: 6 (lower is better) Translates to: SPDRSAERSMIA*LPRSSSDSMSF Trigger: GAAAGACATGGAGTCAGAGCTGCTTCGAGGGAGTCAGGCTATCATGCTGCGCTCTGCAGACCTGTCGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GCAAACACAGCTGGGTCGAAGTGGCAGGTCTCTGAGTaGCCATTGCAGTCACACCTTTGGCACTCGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: ANTAGSKWQVSE*PLQSHLWHSWV Trigger: CACCCACGAGTGCCAAAGGTGTGACTGCAATGGGCACTCAGAGACCTGCCACTTCGACCCAGCTGTGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GTGAAGCCAGGCTTGCAAAGGTCGCAGCGCTCTCCTTaGACGTACTCTTTGCACACACACTGGCCCGTCAGT | + |
Preference number: 6 (lower is better) Translates to: VKPGLQRSQRSP*TYSLHTHWPVS Trigger: ACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAAGCCTGGCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CAGCCCGGGAGGACTGCTCATAAGCCATGGTCAGCATaGGGAAGGCTCCTGAAGGGTCTTCACTGCTTAGCT | + |
Preference number: 6 (lower is better) Translates to: QPGRTAHKPWSA*GRLLKGLHCLA Trigger: AGCTAAGCAGTGAAGACCCTTCAGGAGCCTTCCGCATGCTGACCATGGCTTATGAGCAGTCCTCCCGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CTGGCTCAGCAGGCTAGAACTGTCAGACACTTGCTGTaGAGCCCGGGAGGACTGCTCATAAGCCATGGTCAG | + |
Preference number: 6 (lower is better) Translates to: LAQQARTVRHLL*SPGGLLISHGQ Trigger: CTGACCATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAGTGTCTGACAGTTCTAGCCTGCTGAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | CAGGGCTCACATCATTCTGTGACTGCCACCAGCGCATaGGGCCTGAAGACGATGCGACATTCTCCACTCGGT | + |
Preference number: 6 (lower is better) Translates to: QGSHHSVTATSA*GLKTMRHSPLG Trigger: ACCGAGTGGAGAATGTCGCATCGTCTTCAGGCCCCATGCGCTGGTGGCAGTCACAGAATGATGTGAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | ACACACTGGCCCGTCAGTCGGTCACAGGGAGCTCCCTaGACTGCTCCATCTGGATCACACTCACAGGGAATA | + |
Preference number: 6 (lower is better) Translates to: THWPVSRSQGAP*TAPSGSHSQGI Trigger: TATTCCCTGTGAGTGTGATCCAGATGGAGCAGTCCAGGGAGCTCCCTGTGACCGACTGACGGGCCAGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | ATAGGCCTGGAAGCAGGAGTGGCAGGCCACACATACTaGGTAGCGGTCACAGTGACCTCGTTGGCATTGGTC | + |
Preference number: 6 (lower is better) Translates to: IGLEAGVAGHTY*VAVTVTSLALV Trigger: GACCAATGCCAACGAGGTCACTGTGACCGCTACCCAGTATGTGTGGCCTGCCACTCCTGCTTCCAGGCCTAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TTGCTCTTGGCATCTAGCAACCGAGAAGCCAGGCCATaGTCTTCCAGACCTGTCCCTGTCCACAGGCCTTCG | + |
Preference number: 6 (lower is better) Translates to: LLLASSNREARP*SSRPVPVHRPS Trigger: CGAAGGCCTGTGGACAGGGACAGGTCTGGAAGACCATGGCCTGGCTTCTCGGTTGCTAGATGCCAAGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | TTGCAAAGGTCGCAGCGCTCTCCTTGCACGTACTCTTaGCACACACACTGGCCCGTCAGTCGGTCACAGGGA | + |
Preference number: 6 (lower is better) Translates to: LQRSQRSPCTYS*HTHWPVSRSQG Trigger: TCCCTGTGACCGACTGACGGGCCAGTGTGTGTGCAAAGAGTACGTGCAAGGAGAGCGCTGCGACCTTTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GAAGGGGCACACTGGTCACATTTGGGGCCCACTACATaGGGCAGACACAAGCAGCGTCCGGTTTCCTCCTCA | + |
Preference number: 6 (lower is better) Translates to: EGAHWSHLGPTT*GRHKQRPVSSS Trigger: TGAGGAGGAAACCGGACGCTGCTTGTGTCTGCCCAATGTAGTGGGCCCCAAATGTGACCAGTGTGCCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TTCCAGTGGGAAGGGGCACACTGGTCACATTTGGGGCCCACTACATaGGGCAGACACAAGCAGCGTCCGGTTTCCTCCTCACAAGGCATA | + |
Preference number: 6 (lower is better) Translates to: FQWEGAHWSHLGPTT*GRHKQRPVSSSQGI Trigger: TATGCCTTGTGAGGAGGAAACCGGACGCTGCTTGTGTCTGCCCAATGTAGTGGGCCCCAAATGTGACCAGTGTGCCCCTTCCCACTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | GGTGGCTGCATCTGTGTCAGGATCTGTGAGAAAGCCCCGGACCTGTaGGATGAGAAGCCGTGTGCGCTGGACATCTTCCTCCATCAGCAA | + |
Preference number: 6 (lower is better) Translates to: GGCICVRICEKAPDL*DEKPCALDIFLHQQ Trigger: TTGCTGATGGAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTTCTCACAGATCCTGACACAGATGCAGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | AAAGAGCTCCTCTGCCTCCATCTTGATGCTCAGGATTCGATTGCCTaGCTCGCCCAGCACAGGACTCTGACCCAGCCGGTCCTTCAACTC | + |
Preference number: 6 (lower is better) Translates to: KELLCLHLDAQDSIA*LAQHRTLTQPVLQL Trigger: GAGTTGAAGGACCGGCTGGGTCAGAGTCCTGTGCTGGGCGAGCAAGGCAATCGAATCCTGAGCATCAAGATGGAGGCAGAGGAGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | CAAGGACCTGCTGAACCTCACCAACCCTTTCCTGGATaGGCCGAAGAGAGCGGCCAGTACCCTGCATTGTGT | + |
Preference number: 6 (lower is better) Translates to: QGPAEPHQPFPG*AEESGQYPALC Trigger: ACACAATGCAGGGTACTGGCCGCTCTCTTCGGCTCATCCAGGAAAGGGTTGGTGAGGTTCAGCAGGTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GGGGCACAGCGGTCACAATTGGGGCCAGCTGTGTTATaGTGGCAGACACAGACATTGTTGACCTGCACAGCA | + |
Preference number: 6 (lower is better) Translates to: GAQRSQLGPAVL*WQTQTLLTCTA Trigger: TGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCCCAATTGTGACCGCTGTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | CCTCACAAGGCATATCTTTCCGGGCACCTAAGATACTaGAGTCACAGGCATGGCAGCCCTTCGGGTTGGCGA | + |
Preference number: 6 (lower is better) Translates to: PHKAYLSGHLRY*SHRHGSPSGWR Trigger: TCGCCAACCCGAAGGGCTGCCATGCCTGTGACTGCAGTATCTTAGGTGCCCGGAAAGATATGCCTTGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCCCGACAAGGACACTGTCCTGTAAACTGGTTGCACTaGGAGCTTAGGGAGTTGCGAGGGTCACAGGCACAG | + |
Preference number: 6 (lower is better) Translates to: SRQGHCPVNWLH*ELRELRGSQAQ Trigger: CTGTGCCTGTGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACAGTGTCCTTGTCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCTGTGTCAGGATCTGTGAGAAAGCCCCGGACCTGTTaGATGAGAAGCCGTGTGCGCTGGACATCTTCCTCC | + |
Preference number: 6 (lower is better) Translates to: SVSGSVRKPRTC*MRSRVRWTSSS Trigger: GGAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTTCTCACAGATCCTGACACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | ACTGAGTCCACATTAGGGAGCCTGGCCGCAATGGCCTaGATCTCTTTCATCTTGCGCAGCACTGTGGCTGAG | + |
Preference number: 6 (lower is better) Translates to: TESTLGSLAAMA*ISFILRSTVAE Trigger: CTCAGCCACAGTGCTGCGCAAGATGAAAGAGATCCAGGCCATTGCGGCCAGGCTCCCTAATGTGGACTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | TTCGGTGGCATTACGGAGACTGTGAAGGCGTCGAGCTaGCTCCTGGAGGTCTGTGTCATAGGCCTGGAAGCA | + |
Preference number: 6 (lower is better) Translates to: FGGITETVKASS*LLEVCVIGLEA Trigger: TGCTTCCAGGCCTATGACACAGACCTCCAGGAGCAAGCTCGACGCCTTCACAGTCTCCGTAATGCCACCGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | CCTCAACTGGCTCAGCAGGCTAGAACTGTCAGACACTaGCTGTGCAGCCCGGGAGGACTGCTCATAAGCCAT | + |
Preference number: 6 (lower is better) Translates to: PQLAQQARTVRH*LCSPGGLLISH Trigger: ATGGCTTATGAGCAGTCCTCCCGGGCTGCACAGCAAGTGTCTGACAGTTCTAGCCTGCTGAGCCAGTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGAGTACAGGCTGTCTGCCTAGACCTGCCACAAAGCTaGTTGATGGTGGGTGTCAAGTCAGGCAGCGAAGCC | + |
Preference number: 6 (lower is better) Translates to: GVQAVCLDLPQS*LMVGVKSGSEA Trigger: GGCTTCGCTGCCTGACTTGACACCCACCATCAACAAGCTTTGTGGCAGGTCTAGGCAGACAGCCTGTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | GTGCTGGCACAGTCTGTCGCCAGGTACTGGTACACCCTCCATGTCTaGCCAAAGTCAGAAGAGCGCTCAATCAACATGCCAGCTGGTGTG | + |
Preference number: 6 (lower is better) Translates to: VLAQSVARYWYTLHV*PKSEERSINMPAGV Trigger: CACACCAGCTGGCATGTTGATTGAGCGCTCTTCTGACTTTGGCAAGACATGGAGGGTGTACCAGTACCTGGCGACAGACTGTGCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TCTCCTGGAGTACAGGCTGTCTGCCTAGACCTGCCACAAAGCTTGTaGATGGTGGGTGTCAAGTCAGGCAGCGAAGCCATTTCTAGGCGC | + |
Preference number: 6 (lower is better) Translates to: SPGVQAVCLDLPQSL*MVGVKSGSEAISRR Trigger: GCGCCTAGAAATGGCTTCGCTGCCTGACTTGACACCCACCATCAACAAGCTTTGTGGCAGGTCTAGGCAGACAGCCTGTACTCCAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | AGCTCTCCAGGGCAATCTCCTGGAGTACAGGCTGTCTaGCTAGACCTGCCACAAAGCTTGTTGATGGTGGGT | + |
Preference number: 6 (lower is better) Translates to: SSPGQSPGVQAV*LDLPQSLLMVG Trigger: ACCCACCATCAACAAGCTTTGTGGCAGGTCTAGGCAGACAGCCTGTACTCCAGGAGATTGCCCTGGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | ACCCTTGATGCTGCTTCCTCGGCTGCCCTGATCATTTaGCTGGTCTGCTGGAGCTGGGTGTTGAAGTTTCGT | + |
Preference number: 6 (lower is better) Translates to: TLDAASSAALII*LVCWSWVLKFR Trigger: ACGAAACTTCAACACCCAGCTCCAGCAGACCAGGCAAATGATCAGGGCAGCCGAGGAAGCAGCATCAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | CCAAACCCTTCCCGACAAGGACACTGTCCTGTAAACTaGTTGCACTGGGAGCTTAGGGAGTTGCGAGGGTCA | + |
Preference number: 6 (lower is better) Translates to: PNPSRQGHCPVN*LHWELRELRGS Trigger: TGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACAGTGTCCTTGTCGGGAAGGGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | AACCCTTCCCGACAAGGACACTGTCCTGTAAACTGGTaGCACTGGGAGCTTAGGGAGTTGCGAGGGTCACAG | + |
Preference number: 6 (lower is better) Translates to: NPSRQGHCPVNW*HWELRELRGSQ Trigger: CTGTGACCCTCGCAACTCCCTAAGCTCCCAGTGCAACCAGTTTACAGGACAGTGTCCTTGTCGGGAAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | ATCTGTGTCAGGATCTGTGAGAAAGCCCCGGACCTGTaGGATGAGAAGCCGTGTGCGCTGGACATCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: ICVRICEKAPDL*DEKPCALDIFL Trigger: GAGGAAGATGTCCAGCGCACACGGCTTCTCATCCAACAGGTCCGGGGCTTTCTCACAGATCCTGACACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | CGGTCACAATTGGGGCCAGCTGTGTTATGCTGGCAGACACAGACATaGTTGACCTGCACAGCAGTGGTAGAACCTCCAGGATTAGGGGCA | + |
Preference number: 6 (lower is better) Translates to: RSQLGPAVLCWQTQT*LTCTAVVEPPGLGA Trigger: TGCCCCTAATCCTGGAGGTTCTACCACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCCCAATTGTGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | CCTTTCACCAGCCTTTCAGCTGGTACAAGGACCTGCTaGACCTCACCAACCCTTTCCTGGATGAGCCGAAGA | + |
Preference number: 6 (lower is better) Translates to: PFTSLSAGTRTC*TSPTLSWMSRR Trigger: TCTTCGGCTCATCCAGGAAAGGGTTGGTGAGGTTCAGCAGGTCCTTGTACCAGCTGAAAGGCTGGTGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | AGGATTCGATTGCCTTGCTCGCCCAGCACAGGACTCTaGCCCAGCCGGTCCTTCAACTCTGTATACTTTTGC | + |
Preference number: 6 (lower is better) Translates to: RIRLPCSPSTGL*PSRSFNSVYFC Trigger: GCAAAAGTATACAGAGTTGAAGGACCGGCTGGGTCAGAGTCCTGTGCTGGGCGAGCAAGGCAATCGAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | TTGGGGCCAGCTGTGTTATGCTGGCAGACACAGACATaGTTGACCTGCACAGCAGTGGTAGAACCTCCAGGA | + |
Preference number: 6 (lower is better) Translates to: LGPAVLCWQTQT*LTCTAVVEPPG Trigger: TCCTGGAGGTTCTACCACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GTACAGGCTGTCTGCCTAGACCTGCCACAAAGCTTGTaGATGGTGGGTGTCAAGTCAGGCAGCGAAGCCATT | + |
Preference number: 6 (lower is better) Translates to: VQAVCLDLPQSL*MVGVKSGSEAI Trigger: AATGGCTTCGCTGCCTGACTTGACACCCACCATCAACAAGCTTTGTGGCAGGTCTAGGCAGACAGCCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | TCACAATTGGGGCCAGCTGTGTTATGCTGGCAGACACAGACATTGTaGACCTGCACAGCAGTGGTAGAACCTCCAGGATTAGGGGCACAG | + |
Preference number: 6 (lower is better) Translates to: SQLGPAVLCWQTQTL*TCTAVVEPPGLGAQ Trigger: CTGTGCCCCTAATCCTGGAGGTTCTACCACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGCTGGCCCCAATTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | CAATCTCCTGGAGTACAGGCTGTCTGCCTAGACCTGCCACAAAGCTaGTTGATGGTGGGTGTCAAGTCAGGCAGCGAAGCCATTTCTAGG | + |
Preference number: 6 (lower is better) Translates to: QSPGVQAVCLDLPQS*LMVGVKSGSEAISR Trigger: CCTAGAAATGGCTTCGCTGCCTGACTTGACACCCACCATCAACAAGCTTTGTGGCAGGTCTAGGCAGACAGCCTGTACTCCAGGAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | TTGGTCAATCCACAGGTAGATGAGGCTCGAAGAAGCTaGGTCCTTCCAATGAGCAAGTCCCCCACAGGTGGA | + |
Preference number: 6 (lower is better) Translates to: LVNPQVDEARRS*VLPMSKSPTGG Trigger: TCCACCTGTGGGGGACTTGCTCATTGGAAGGACTCAGCTTCTTCGAGCCTCATCTACCTGTGGATTGACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 72 bp | AGTCTGTCGCCAGGTACTGGTACACCCTCCATGTCTTaGCAAAGTCAGAAGAGCGCTCAATCAACATGCCAG | + |
Preference number: 6 (lower is better) Translates to: SLSPGTGTPSMS*QSQKSAQSTCQ Trigger: CTGGCATGTTGATTGAGCGCTCTTCTGACTTTGGCAAGACATGGAGGGTGTACCAGTACCTGGCGACAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GCTGTGTTATGCTGGCAGACACAGACATTGTTGACCTaGACAGCAGTGGTAGAACCTCCAGGATTAGGGGCA | + |
Preference number: 6 (lower is better) Translates to: AVLCWQTQTLLT*TAVVEPPGLGA Trigger: TGCCCCTAATCCTGGAGGTTCTACCACTGCTGTGCAGGTCAACAATGTCTGTGTCTGCCAGCATAACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | CAGTCGGTCACAGGGAGCTCCCTGGACTGCTCCATCTaGATCACACTCACAGGGAATACAAGTCTCATGAAT | + |
Preference number: 6 (lower is better) Translates to: QSVTGSSLDCSI*ITLTGNTSLMN Trigger: ATTCATGAGACTTGTATTCCCTGTGAGTGTGATCCAGATGGAGCAGTCCAGGGAGCTCCCTGTGACCGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 72 bp | CAGTCTGTCGCCAGGTACTGGTACACCCTCCATGTCTaGCCAAAGTCAGAAGAGCGCTCAATCAACATGCCA | + |
Preference number: 6 (lower is better) Translates to: QSVARYWYTLHV*PKSEERSINMP Trigger: TGGCATGTTGATTGAGCGCTCTTCTGACTTTGGCAAGACATGGAGGGTGTACCAGTACCTGGCGACAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CAA 90 bp | ACAGAAGTGCCTTCCAGAATCTGTCTGATCTGCTCAATCTTGCTCTaGGCATCTAGCAACCGAGAAGCCAGGCCATGGTCTTCCAGACCT | + |
Preference number: 6 (lower is better) Translates to: TEVPSRICLICSILL*ASSNREARPWSSRP Trigger: AGGTCTGGAAGACCATGGCCTGGCTTCTCGGTTGCTAGATGCCAAGAGCAAGATTGAGCAGATCAGACAGATTCTGGAAGGCACTTCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CAA 90 bp | CAGCACAGGACTCTGACCCAGCCGGTCCTTCAACTCTGTATACTTTaGCTTAAGTCTCTTAAAGCCCTCCTGGGCATTCATTGCCTGCTG | + |
Preference number: 6 (lower is better) Translates to: QHRTLTQPVLQLCIL*LKSLKALLGIHCLL Trigger: CAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAAGCAAAAGTATACAGAGTTGAAGGACCGGCTGGGTCAGAGTCCTGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TGGTCAGCATGCGGAAGGCTCCTGAAGGGTCTTCACTaGTTAGCTTCTCAAATTGCTCCTTCTTGCTTCGGT | + |
Preference number: 6 (lower is better) Translates to: WSACGRLLKGLH*LASQIAPSCFG Trigger: ACCGAAGCAAGAAGGAGCAATTTGAGAAGCTAAGCAGTGAAGACCCTTCAGGAGCCTTCCGCATGCTGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TCATCCGTGCCCAGAATCCACTCATCTGTTCCTTCATaGCTTTCACCAGCCTTTCAGCTGGTACAAGGACCT | + |
Preference number: 6 (lower is better) Translates to: SSVPRIHSSVPS*LSPAFQLVQGP Trigger: AGGTCCTTGTACCAGCTGAAAGGCTGGTGAAAGGCATGAAGGAACAGATGAGTGGATTCTGGGCACGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCTCCACTCGGTGACTGTTGTAATTTCGAGGCAGCCTaGAGTCACACTTGCAGCATTTCATCTGCCACTGTC | + |
Preference number: 6 (lower is better) Translates to: SPLGDCCNFEAA*SHTCSISSATV Trigger: GACAGTGGCAGATGAAATGCTGCAAGTGTGACTCCAGGCTGCCTCGAAATTACAACAGTCACCGAGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS TCA 72 bp | GCTGGTGTGAGACCCTTAAAATCCATCATGATGTCCTaGAGCTGCATCCTCTTGTCTAGGTCCAGCTGCAGA | + |
Preference number: 6 (lower is better) Translates to: AGVRPLKSIMMS*SCILLSRSSCR Trigger: TCTGCAGCTGGACCTAGACAAGAGGATGCAGCTTCAGGACATCATGATGGATTTTAAGGGTCTCACACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS GCA 72 bp | GCTCCTGAAGGGTCTTCACTGCTTAGCTTCTCAAATTaGTCCTTCTTGCTTCGGTACATAAGGAGGAGCCGA | + |
Preference number: 6 (lower is better) Translates to: APEGSSLLSFSN*SFLLRYIRRSR Trigger: TCGGCTCCTCCTTATGTACCGAAGCAAGAAGGAGCAATTTGAGAAGCTAAGCAGTGAAGACCCTTCAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GCAGGGATAGCTGATGCTAAATCCATAAGGTTAAGTTaGACCTTTCCCCCAGTCAGATGCCCATTAGGCCTC | + |
Preference number: 6 (lower is better) Translates to: AGIADAKSIRLS*TFPPVRCPLGL Trigger: GAGGCCTAATGGGCATCTGACTGGGGGAAAGGTCCAACTTAACCTTATGGATTTAGCATCAGCTATCCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | ACTCACAGGGAATACAAGTCTCATGAATGGGAGCGCTaGGTCGTCTATTCCGGAAATAGTGTAGCTGACAGC | + |
Preference number: 6 (lower is better) Translates to: THREYKSHEWER*VVYSGNSVADS Trigger: GCTGTCAGCTACACTATTTCCGGAATAGACGACCCAGCGCTCCCATTCATGAGACTTGTATTCCCTGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS CCA 72 bp | TCTGTATACTTTTGCTTAAGTCTCTTAAAGCCCTCCTaGGCATTCATTGCCTGCTGGCTGGCACCCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: SVYFCLSLLKPS*AFIACWLAPSA Trigger: TGCAGAGGGTGCCAGCCAGCAGGCAATGAATGCCCAGGAGGGCTTTAAGAGACTTAAGCAAAAGTATACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS TCA 72 bp | GCAATAGGTCTCAGGTTTGGTCAATCCACAGGTAGATaGGGCTCGAAGAAGCTGAGTCCTTCCAATGAGCAA | + |
Preference number: 6 (lower is better) Translates to: AIGLRFGQSTGR*GSKKLSPSNEQ Trigger: TTGCTCATTGGAAGGACTCAGCTTCTTCGAGCCTCATCTACCTGTGGATTGACCAAACCTGAGACCTATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CCA 72 bp | GCCAAAGTCAGAAGAGCGCTCAATCAACATGCCAGCTaGTGTGAGACCCTTAAAATCCATCATGATGTCCTG | + |
Preference number: 6 (lower is better) Translates to: AKVRRALNQHAS*CETLKIHHDVL Trigger: CAGGACATCATGATGGATTTTAAGGGTCTCACACCAGCTGGCATGTTGATTGAGCGCTCTTCTGACTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000192322.6 ENSMUST00000194677.6 |
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CDS CAA 72 bp | GGGTCTTCACTGCTTAGCTTCTCAAATTGCTCCTTCTaGCTTCGGTACATAAGGAGGAGCCGACTGAAGCTT | + |
Preference number: 6 (lower is better) Translates to: GSSLLSFSNCSF*LRYIRRSRLKL Trigger: AAGCTTCAGTCGGCTCCTCCTTATGTACCGAAGCAAGAAGGAGCAATTTGAGAAGCTAAGCAGTGAAGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |
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CDS GCA 72 bp | TCTGTGACAGAAGTGCCTTCCAGAATCTGTCTGATCTaGTCAATCTTGCTCTTGGCATCTAGCAACCGAGAA | + |
Preference number: 6 (lower is better) Translates to: SVTEVPSRICLI*SILLLASSNRE Trigger: TTCTCGGTTGCTAGATGCCAAGAGCAAGATTGAGCAGATCAGACAGATTCTGGAAGGCACTTCTGTCACAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016315.16 ENSMUST00000159955.2 ENSMUST00000194677.6 |