RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052911

Ensembl transcript IDs: ENSMUST00000065014.10, ENSMUST00000194147.2, ENSMUST00000195058.2, ENSMUST00000195483.6

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCCGAGCCCGGCCCAGCGCTAGATCTGCCGTGGCTGCTGCCCCACTaGAACCGAGGCCACCACAACGGGGCTGCCCATCTTCATCCCGAC +
Preference number: 5 (lower is better)
Translates to: AEPGPALDLPWLLPH*NRGHHNGAAHLHPD
Trigger: GTCGGGATGAAGATGGGCAGCCCCGTTGTGGTGGCCTCGGTTGCAGTGGGGCAGCAGCCACGGCAGATCTAGCGCTGGGCCGGGCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CTGAGGATGCCGCCACCTTCTACCAGTGCCCGCTGCAGCTCTGCCTaGGTGTGCCGAGCCCGGCCCAGCGCTAGATCTGCCGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRMPPPSTSARCSSA*VCRARPSARSAVAA
Trigger: AGCAGCCACGGCAGATCTAGCGCTGGGCCGGGCTCGGCACACGCAGGCAGAGCTGCAGCGGGCACTGGTAGAAGGTGGCGGCATCCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CTGCCCCTCCCTGGTTCTCCTGAGGCCCACTCCATCCCGACCGTGTaGGTACTGGGCTGGTGTCCCTCCAGGCCCTCAATCTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LPLPGSPEAHSIPTV*VLGWCPSRPSICPG
Trigger: CCCTGGACAGATTGAGGGCCTGGAGGGACACCAGCCCAGTACCCACACGGTCGGGATGGAGTGGGCCTCAGGAGAACCAGGGAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194147.2
CDS TCA 90 bp GCTGCTGTGCCTCTTCTGCCTGCCGACGAGTCTCAGACACCCGGCTaGGGATGCCGCCACCTTCTACCAGTGCCCGCTGCAGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: AAVPLLPADESQTPG*GCRHLLPVPAAALP
Trigger: AGGCAGAGCTGCAGCGGGCACTGGTAGAAGGTGGCGGCATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GCCTTGTCCAGGGCTGCCTGTGCTCGCTGCTGTGCCTCTTCTGCCTaGCGACGAGTCTCAGACACCCGGCTGAGGATGCCGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: ALSRAACARCCASSA*RRVSDTRLRMPPPS
Trigger: AGAAGGTGGCGGCATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGACAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp ATTAGCCTTGTCCAGGGCTGCCTGTGCTCGCTGCTGTGCCTCTTCTaGCTGCCGACGAGTCTCAGACACCCGGCTGAGGATGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: ISLVQGCLCSLLCLF*LPTSLRHPAEDAAT
Trigger: GGTGGCGGCATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGACAAGGCTAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TGGCCCCTGGAAGCATTAGCCTTGTCCAGGGCTGCCTGTGCTCGCTaGTGTGCCTCTTCTGCCTGCCGACGAGTCTCAGACACCCGGCTG +
Preference number: 5 (lower is better)
Translates to: WPLEALALSRAACAR*CASSACRRVSDTRL
Trigger: CAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGACAAGGCTAATGCTTCCAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GTATTGTGCTTGCAGATACAGGCTCCGTGTACCATGCCCTCAGCATaGGCCGGCGCCCCTGGTGCAGGCGCACACTGTGAGGCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: VLCLQIQAPCTMPSA*AGAPGAGAHCEAWP
Trigger: TGGCCACGCCTCACAGTGTGCGCCTGCACCAGGGGCGCCGGCCCATGCTGAGGGCATGGTACACGGAGCCTGTATCTGCAAGCACAATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CGCAGCGCCGCCCAATCATGTGTTGGCGGCAGCGGCACTGACCGGTaGCCTCATCACACTGAGGATCCAAGGCACCGCCCACATCACAGT +
Preference number: 5 (lower is better)
Translates to: RSAAQSCVGGSGTDR*PHHTEDPRHRPHHS
Trigger: ACTGTGATGTGGGCGGTGCCTTGGATCCTCAGTGTGATGAGGCCACCGGTCAGTGCCGCTGCCGCCAACACATGATTGGGCGGCGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GCCGGGTATCTGCTGAGTTGCTCACAGGGCTGGGTACTGCAAAGGTaGAGGCGTTGGCACGGCGCTCTGCCTCTGTGGACTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: AGYLLSCSQGWVLQR*RRWHGALPLWTGCG
Trigger: CCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAGATACCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GCACTTCCGTCCGACGCCGGGTATCTGCTGAGTTGCTCACAGGGCTaGGTACTGCAAAGGTGGAGGCGTTGGCACGGCGCTCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ALPSDAGYLLSCSQG*VLQRWRRWHGALPL
Trigger: CAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAGATACCCGGCGTCGGACGGAAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GGTGCGCATCTTGCAGTAGCTGTTCAGCCCGACGCACGTCGCCCATaGTATGGGCCAGGATTGTGTCCACGTCGGCCAGGCTTCGGACGC +
Preference number: 5 (lower is better)
Translates to: GAHLAVAVQPDARRP*YGPGLCPRRPGFGR
Trigger: GCGTCCGAAGCCTGGCCGACGTGGACACAATCCTGGCCCATACCATGGGCGACGTGCGTCGGGCTGAACAGCTACTGCAAGATGCGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp GGGCACCGCCTGGGATCTGTGCCCAGAAGGTTGCAGGTACAGCGGTaGCAGCTCTGTCGGGCAGCTTGCCCATGGAAGCCAGGCTTGCAA +
Preference number: 5 (lower is better)
Translates to: GHRLGSVPRRLQVQR*QLCRAACPWKPGLQ
Trigger: TTGCAAGCCTGGCTTCCATGGGCAAGCTGCCCGACAGAGCTGTCACCGCTGTACCTGCAACCTTCTGGGCACAGATCCCAGGCGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp AAGCTGCTCTCAAAGGCACCCAGCACTCCTGTTTGCTGCAACTCCTaGGCCCACTGCTCCAGGCGCCGCGTCCGAGCAGCCAGGTCCTGT +
Preference number: 5 (lower is better)
Translates to: KLLSKAPSTPVCCNS*AHCSRRRVRAARSC
Trigger: ACAGGACCTGGCTGCTCGGACGCGGCGCCTGGAGCAGTGGGCTCAGGAGTTGCAGCAAACAGGAGTGCTGGGTGCCTTTGAGAGCAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CTGAGCGGCCTGCAACAGGTCCCGAGCCTCATCCCGCAGTTGTTCTaGCCTGGCTTGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSGLQQVPSLIPQLF*PGLCSQNTFSLPLC
Trigger: GCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAGGCCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GCTGGGCCGCTTTGCCCTCCAGTGCACGCTCGTTCTCCTCATATGTaGCCTCCAGCTCCTGTAGCCGCTGCAGCTTATCCTGAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: AGPLCPPVHARSPHM*PPAPVAAAAYPERP
Trigger: AGGCCGCTCAGGATAAGCTGCAGCGGCTACAGGAGCTGGAGGGCACATATGAGGAGAACGAGCGTGCACTGGAGGGCAAAGCGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CACCAGGAACTCCACTTCCTGACCTTCTCGCAGCCGCACAAAGCCTaGGCCAGTCCAGGACGGAGTCTCTCGGTTGGTCACCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: HQELHFLTFSQPHKA*ASPGRSLSVGHQPL
Trigger: GAGCGGCTGGTGACCAACCGAGAGACTCCGTCCTGGACTGGCCCAGGCTTTGTGCGGCTGCGAGAAGGTCAGGAAGTGGAGTTCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TGCTGGGAATATCCATCCCGGTGGCAAGAAGTAGCAAAGTGTCGCTaGCTCCCAGGGCCTTCAGGGCAGGGACAAGGCCGGCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: CWEYPSRWQEVAKCR*LPGPSGQGQGRHWP
Trigger: GGGCCAGTGCCGGCCTTGTCCCTGCCCTGAAGGCCCTGGGAGCCAGCGACACTTTGCTACTTCTTGCCACCGGGATGGATATTCCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CTGCTGAGTTGCTCACAGGGCTGGGTACTGCAAAGGTGGAGGCGTTaGCACGGCGCTCTGCCTCTGTGGACTGGCTGTGGGCATGTCGGA +
Preference number: 5 (lower is better)
Translates to: LLSCSQGWVLQRWRR*HGALPLWTGCGHVG
Trigger: TCCGACATGCCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TCGGCCAGGCTTCGGACGCGTTCTGCAATCTCACTGGCTAGGCGCTaGATCTGCTCGGGTGAGGCCGGGATGGAGATGTCTAGCACCCGA +
Preference number: 5 (lower is better)
Translates to: SARLRTRSAISLARR*ICSGEAGMEMSSTR
Trigger: TCGGGTGCTAGACATCTCCATCCCGGCCTCACCCGAGCAGATCCAGCGCCTAGCCAGTGAGATTGCAGAACGCGTCCGAAGCCTGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CGGCCTGCAACAGGTCCCGAGCCTCATCCCGCAGTTGTTCTGCCCTaGCTTGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTGCCAACG +
Preference number: 5 (lower is better)
Translates to: RPATGPEPHPAVVLP*LVQPEHLQPSALPT
Trigger: CGTTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TCGGCAGGGGCACTGTCCACTAGTCCCTTCACAGAGGGCACTGAGTaGTCCATCAGGACTACACTGGCAGGCTTGACAGCCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SAGALSTSPFTEGTE*SIRTTLAGLTACRA
Trigger: GGCCCTGCAGGCTGTCAAGCCTGCCAGTGTAGTCCTGATGGAGCACTCAGTGCCCTCTGTGAAGGGACTAGTGGACAGTGCCCCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CCTGGAAGCATTAGCCTTGTCCAGGGCTGCCTGTGCTCGCTGCTGTaGCTCTTCTGCCTGCCGACGAGTCTCAGACACCCGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: PGSISLVQGCLCSLL*LFCLPTSLRHPAED
Trigger: ATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGACAAGGCTAATGCTTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp AGGCTTCGGACGCGTTCTGCAATCTCACTGGCTAGGCGCTGGATCTaGTCGGGTGAGGCCGGGATGGAGATGTCTAGCACCCGAGTCGCT +
Preference number: 5 (lower is better)
Translates to: RLRTRSAISLARRWI*SGEAGMEMSSTRVA
Trigger: AGCGACTCGGGTGCTAGACATCTCCATCCCGGCCTCACCCGAGCAGATCCAGCGCCTAGCCAGTGAGATTGCAGAACGCGTCCGAAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CAACAGGTCCCGAGCCTCATCCCGCAGTTGTTCTGCCCTGGCTTGTaGAGCCAGAACACCTTCAGCCTTCCGCTCTGCCAACGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: QQVPSLIPQLFCPGL*SQNTFSLPLCQRPH
Trigger: GTGAGGGCGTTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TGGGCACTGCCCAGTGCTTGGGTCACAATGGCACAGGTCGGTAGATaGGCACCGCCTGGGATCTGTGCCCAGAAGGTTGCAGGTACAGCG +
Preference number: 5 (lower is better)
Translates to: WALPSAWVTMAQVGR*APPGICAQKVAGTA
Trigger: CGCTGTACCTGCAACCTTCTGGGCACAGATCCCAGGCGGTGCCCATCTACCGACCTGTGCCATTGTGACCCAAGCACTGGGCAGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TGGACATGGGGAAGGCATGGGCACTGCCCAGTGCTTGGGTCACAATaGCACAGGTCGGTAGATGGGCACCGCCTGGGATCTGTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WTWGRHGHCPVLGSQ*HRSVDGHRLGSVPR
Trigger: TCTGGGCACAGATCCCAGGCGGTGCCCATCTACCGACCTGTGCCATTGTGACCCAAGCACTGGGCAGTGCCCATGCCTTCCCCATGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GTTGAGGCCTTGGACATGGGGAAGGCATGGGCACTGCCCAGTGCTTaGGTCACAATGGCACAGGTCGGTAGATGGGCACCGCCTGGGATC +
Preference number: 5 (lower is better)
Translates to: VEALDMGKAWALPSA*VTMAQVGRWAPPGI
Trigger: GATCCCAGGCGGTGCCCATCTACCGACCTGTGCCATTGTGACCCAAGCACTGGGCAGTGCCCATGCCTTCCCCATGTCCAAGGCCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TTGTGTCCACGTCGGCCAGGCTTCGGACGCGTTCTGCAATCTCACTaGCTAGGCGCTGGATCTGCTCGGGTGAGGCCGGGATGGAGATGT +
Preference number: 5 (lower is better)
Translates to: LCPRRPGFGRVLQSH*LGAGSARVRPGWRC
Trigger: ACATCTCCATCCCGGCCTCACCCGAGCAGATCCAGCGCCTAGCCAGTGAGATTGCAGAACGCGTCCGAAGCCTGGCCGACGTGGACACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GCATCTTGCAGTAGCTGTTCAGCCCGACGCACGTCGCCCATGGTATaGGCCAGGATTGTGTCCACGTCGGCCAGGCTTCGGACGCGTTCT +
Preference number: 5 (lower is better)
Translates to: ASCSSCSARRTSPMV*ARIVSTSARLRTRS
Trigger: AGAACGCGTCCGAAGCCTGGCCGACGTGGACACAATCCTGGCCCATACCATGGGCGACGTGCGTCGGGCTGAACAGCTACTGCAAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp ATGGCCTGGAGCACACTGCGCATCCTGGCTTCCAGCCCATCCAGCTaGGCCGCTTTGCCCTCCAGTGCACGCTCGTTCTCCTCATATGTG +
Preference number: 5 (lower is better)
Translates to: MAWSTLRILASSPSS*AALPSSARSFSSYV
Trigger: CACATATGAGGAGAACGAGCGTGCACTGGAGGGCAAAGCGGCCCAGCTGGATGGGCTGGAAGCCAGGATGCGCAGTGTGCTCCAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TCCACTACTGGAGTCACAAGGGGAGCTCCCAGGCACTGTGCCCCGTaGATTACACTGGCAACGCTGGCACCCTCGAGGGTCACTGGCACT +
Preference number: 5 (lower is better)
Translates to: STTGVTRGAPRHCAP*ITLATLAPSRVTGT
Trigger: AGTGCCAGTGACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTCCAGTAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TTGCAGACACACGGCCGGCAATTAGGGAATCCCCACTGGCCACGTTaGCAGTGGTCACAGCGAAGACCAAAGGCACCAGGTCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LQTHGRQLGNPHWPR*QWSQRRPKAPGRQG
Trigger: CCCCTGCCGACCTGGTGCCTTTGGTCTTCGCTGTGACCACTGTCAACGTGGCCAGTGGGGATTCCCTAATTGCCGGCCGTGTGTCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TGCCCTGTGAACTCATTGCAGGTAGGGCCTCTGGCCCGGCTTGGGTaGCAAGCACAAGGCTGGCAGCCACGGCCACTGGTGAAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: CPVNSLQVGPLARLG*QAQGWQPRPLVKFQ
Trigger: TTGGAACTTCACCAGTGGCCGTGGCTGCCAGCCTTGTGCTTGTCACCCAAGCCGGGCCAGAGGCCCTACCTGCAATGAGTTCACAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GGCCAGGCAGACAGCGGTCACAGCCATGTCCGGTCACCAGACGCTTaGAGAAACAGGTTCCACTACTGGAGTCACAAGGGGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GQADSGHSHVRSPDA*RNRFHYWSHKGSSQ
Trigger: CTGGGAGCTCCCCTTGTGACTCCAGTAGTGGAACCTGTTTCTGCAAGCGTCTGGTGACCGGACATGGCTGTGACCGCTGTCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CTGGACCCGCTGCAGGGTCTGCTCTGTGTTTTGTGTGTCAACCACTaGTCCCCAGATGGCACCCTGAGCAGCTCCTTGTGCCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LDPLQGLLCVLCVNH*SPDGTLSSSLCPLS
Trigger: GCTCAGAGGGCACAAGGAGCTGCTCAGGGTGCCATCTGGGGAGCAGTGGTTGACACACAAAACACAGAGCAGACCCTGCAGCGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TTGCCGAGCCCGCTCACCGGCAGAGTTCAGAGACTTCTCTGCACCTaGCATCCTCTCCTGGACCCGCTGCAGGGTCTGCTCTGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LPSPLTGRVQRLLCT*HPLLDPLQGLLCVL
Trigger: CAAAACACAGAGCAGACCCTGCAGCGGGTCCAGGAGAGGATGGCAGGTGCAGAGAAGTCTCTGAACTCTGCCGGTGAGCGGGCTCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp ATGAGGCCGTCAGTCTGTCCGCACGGCCCACCAACAGGTCACCGGTaGCTGGATAGCAGCTTCCTCGAGAACAGCCAGGTACATCCAAGG +
Preference number: 5 (lower is better)
Translates to: MRPSVCPHGPPTGHR*LDSSFLENSQVHPR
Trigger: CCTTGGATGTACCTGGCTGTTCTCGAGGAAGCTGCTATCCAGCCACCGGTGACCTGTTGGTGGGCCGTGCGGACAGACTGACGGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065014.10
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS CCA 90 bp ACACTGCCCTGTGAACTCATTGCAGGTAGGGCCTCTGGCCCGGCTTaGGTGACAAGCACAAGGCTGGCAGCCACGGCCACTGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TLPCELIAGRASGPA*VTSTRLAATATGEV
Trigger: AACTTCACCAGTGGCCGTGGCTGCCAGCCTTGTGCTTGTCACCCAAGCCGGGCCAGAGGCCCTACCTGCAATGAGTTCACAGGGCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GGTGCCCCACACACCAACTCATTTATGCCCGTCAGGCTCAGGGTGTaGGCATGTGCAGAGAGCCGTCCCAGTGCCTGCTGGTTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GAPHTNSFMPVRLRV*ACAESRPSACWLAK
Trigger: TTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCTGACGGGCATAAATGAGTTGGTGTGTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp AACAGGTTCCACTACTGGAGTCACAAGGGGAGCTCCCAGGCACTGTaGCCCGTGAATTACACTGGCAACGCTGGCACCCTCGAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: NRFHYWSHKGSSQAL*PVNYTGNAGTLEGH
Trigger: GTGACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTCCAGTAGTGGAACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GGAGTCTCTCGGTTGGTCACCAGCCGCTCTACCACCTCAAGCCCCTaGCCTTGGGCAGCCTCAGCCTCCCAGGTTAAATGGTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GVSRLVTSRSTTSSP*PWAASASQVKWSRK
Trigger: TTTTCTGGACCATTTAACCTGGGAGGCTGAGGCTGCCCAAGGGCAGGGGCTTGAGGTGGTAGAGCGGCTGGTGACCAACCGAGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GACTTCTCTGCACCTGCCATCCTCTCCTGGACCCGCTGCAGGGTCTaGTCTGTGTTTTGTGTGTCAACCACTGCTCCCCAGATGGCACCC +
Preference number: 5 (lower is better)
Translates to: DFSAPAILSWTRCRV*SVFCVSTTAPQMAP
Trigger: GGGTGCCATCTGGGGAGCAGTGGTTGACACACAAAACACAGAGCAGACCCTGCAGCGGGTCCAGGAGAGGATGGCAGGTGCAGAGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GGCACGGCTCTGGGCACTGCCTGCTGTTTCTTCCGCTGTAGATGCTaGCAGGCTATTTCCTGCCCGTTTCAGTTTCAGGGCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GTALGTACCFFRCRC*QAISCPFQFQGLQE
Trigger: CTCCTGGAGGCCCTGAAACTGAAACGGGCAGGAAATAGCCTGGCAGCATCTACAGCGGAAGAAACAGCAGGCAGTGCCCAGAGCCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CCTGGCACGGCTCTGGGCACTGCCTGCTGTTTCTTCCGCTGTAGATaGTGCCAGGCTATTTCCTGCCCGTTTCAGTTTCAGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PGTALGTACCFFRCR*CQAISCPFQFQGLQ
Trigger: CTGGAGGCCCTGAAACTGAAACGGGCAGGAAATAGCCTGGCAGCATCTACAGCGGAAGAAACAGCAGGCAGTGCCCAGAGCCGTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GAGTCACAAGGGGAGCTCCCAGGCACTGTGCCCCGTGAATTACACTaGCAACGCTGGCACCCTCGAGGGTCACTGGCACTAAGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: ESQGELPGTVPRELH*QRWHPRGSLALSPK
Trigger: CTTTGGACTTAGTGCCAGTGACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TGGGTACTGCAAAGGTGGAGGCGTTGGCACGGCGCTCTGCCTCTGTaGACTGGCTGTGGGCATGTCGGATGCTGTCATAGGCACCTAAGA +
Preference number: 5 (lower is better)
Translates to: WVLQRWRRWHGALPL*TGCGHVGCCHRHLR
Trigger: TCTTAGGTGCCTATGACAGCATCCGACATGCCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp ACTGACAATACAGTAGGGTTGAGGGCTATGCAAGCCACACGTGGATaGGGCCGTCAGTCTGTCCGCACGGCCCACCAACAGGTCACCGGT +
Preference number: 5 (lower is better)
Translates to: TDNTVGLRAMQATRG*GRQSVRTAHQQVTG
Trigger: ACCGGTGACCTGTTGGTGGGCCGTGCGGACAGACTGACGGCCTCATCCACGTGTGGCTTGCATAGCCCTCAACCCTACTGTATTGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065014.10
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS GCA 90 bp CCCGTTGCACTCACACTTCCGACAGGCGTGAGTATGGCCGTCCTCTaGAGGGTGCCAGGGAAGGTCCTGATAGAAATCCTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: PVALTLPTGVSMAVL*RVPGKVLIEILTLL
Trigger: GAGCAGTGTCAGGATTTCTATCAGGACCTTCCCTGGCACCCTGCAGAGGACGGCCATACTCACGCCTGTCGGAAGTGTGAGTGCAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp AGCGGTGACAGCTCTGTCGGGCAGCTTGCCCATGGAAGCCAGGCTTaGAATAGCCACAGTGGGGCCCCTCTGTGTTGTGTAAACAACGCA +
Preference number: 5 (lower is better)
Translates to: SGDSSVGQLAHGSQA*NSHSGAPLCCVNNA
Trigger: TGCGTTGTTTACACAACACAGAGGGGCCCCACTGTGGCTATTGCAAGCCTGGCTTCCATGGGCAAGCTGCCCGACAGAGCTGTCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CAATGGTCACAGTTGAGGCCTTGGACATGGGGAAGGCATGGGCACTaGCCAGTGCTTGGGTCACAATGGCACAGGTCGGTAGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: QWSQLRPWTWGRHGH*PVLGSQWHRSVDGH
Trigger: GTGCCCATCTACCGACCTGTGCCATTGTGACCCAAGCACTGGGCAGTGCCCATGCCTTCCCCATGTCCAAGGCCTCAACTGTGACCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp ACACACCAACTCATTTATGCCCGTCAGGCTCAGGGTGTGGGCATGTaGAGAGAGCCGTCCCAGTGCCTGCTGGTTGGCCAAATGTTGGCG +
Preference number: 5 (lower is better)
Translates to: THQLIYARQAQGVGM*REPSQCLLVGQMLA
Trigger: CGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCTGACGGGCATAAATGAGTTGGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TTTCCTGCCCGTTTCAGTTTCAGGGCCTCCAGGAGGGCGTCTAATTaGCGAGCCCGCTCACCGGCAGAGTTCAGAGACTTCTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: FPARFSFRASRRASN*RARSPAEFRDFSAP
Trigger: AGGTGCAGAGAAGTCTCTGAACTCTGCCGGTGAGCGGGCTCGGCAATTAGACGCCCTCCTGGAGGCCCTGAAACTGAAACGGGCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GCATCAGGGTCCATGGGATCAATGTTTCCACTGCACTCACACAGTTaGCACCTGCCACCTGGCTTTGATGGGTCCCCAAAGTGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: ASGSMGSMFPLHSHS*HLPPGFDGSPKCPG
Trigger: CCCCGGGCACTTTGGGGACCCATCAAAGCCAGGTGGCAGGTGCCAACTGTGTGAGTGCAGTGGAAACATTGATCCCATGGACCCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp CAGCACACGATAGATGACCTCGCCTTCCGTAGACGGCTCGATTTCTaGGTAGCGGGACTCACACACTACATCATCCCAGCGACGTGGCGG +
Preference number: 5 (lower is better)
Translates to: QHTIDDLAFRRRLDF*VAGLTHYIIPATWR
Trigger: CCGCCACGTCGCTGGGATGATGTAGTGTGTGAGTCCCGCTACTCAGAAATCGAGCCGTCTACGGAAGGCGAGGTCATCTATCGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp AGCCATCACGGCATTGCTGGCAGCGAGTGCCAACCACGTGTTCTTTaGAGCGACACTGGCCTGAGACCAGTCCTAGCACAGGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: SHHGIAGSECQPRVL*SDTGLRPVLAQGHH
Trigger: ATGATGACCCTGTGCTAGGACTGGTCTCAGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp CCTCGAGGGTCACTGGCACTAAGTCCAAAGAAGCCATCACGGCATTaGTGGCAGCGAGTGCCAACCACGTGTTCTTTGCAGCGACACTGG +
Preference number: 5 (lower is better)
Translates to: PRGSLALSPKKPSRH*WQRVPTTCSLQRHW
Trigger: CCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGACTTAGTGCCAGTGACCCTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GTCCAACCACTCCAGGTTTGCACCGGCACTGGCCACCGTGAGGACTaGATTCAGAACTCAGTGAGCCTTGAGGGTCACACTGACATGGCA +
Preference number: 5 (lower is better)
Translates to: VQPLQVCTGTGHRED*IQNSVSLEGHTDMA
Trigger: TGCCATGTCAGTGTGACCCTCAAGGCTCACTGAGTTCTGAATGCAGTCCTCACGGTGGCCAGTGCCGGTGCAAACCTGGAGTGGTTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GCCCGTCAGGCTCAGGGTGTGGGCATGTGCAGAGAGCCGTCCCAGTaGCTGCTGGTTGGCCAAATGTTGGCGGTTGAAGTTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ARQAQGVGMCREPSQ*LLVGQMLAVEVFFL
Trigger: CAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCTGACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CGAGGGTCACTGGCACTAAGTCCAAAGAAGCCATCACGGCATTGCTaGCAGCGAGTGCCAACCACGTGTTCTTTGCAGCGACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: RGSLALSPKKPSRHC*QRVPTTCSLQRHWP
Trigger: AGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGACTTAGTGCCAGTGACCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp AGGCTCAGGGTGTGGGCATGTGCAGAGAGCCGTCCCAGTGCCTGCTaGTTGGCCAAATGTTGGCGGTTGAAGTTTTCTTTTTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: RLRVWACAESRPSAC*LAKCWRLKFSFWAP
Trigger: GGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CCTACTTGTTCCCGTAGTTGTTTCTCAGCCTCCCTGGCACGGCTCTaGGCACTGCCTGCTGTTTCTTCCGCTGTAGATGCTGCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PTCSRSCFSASLARL*ALPAVSSAVDAARL
Trigger: TAGCCTGGCAGCATCTACAGCGGAAGAAACAGCAGGCAGTGCCCAGAGCCGTGCCAGGGAGGCTGAGAAACAACTACGGGAACAAGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp CAGAGAGCCGTCCCAGTGCCTGCTGGTTGGCCAAATGTTGGCGGTTaGAGTTTTCTTTTTGGGCACCCATTAGCACTTCCGTCCGACGCC +
Preference number: 5 (lower is better)
Translates to: QRAVPVPAGWPNVGG*SFLFGHPLALPSDA
Trigger: GGCGTCGGACGGAAGTGCTAATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GGCACTGAGTGCTCCATCAGGACTACACTGGCAGGCTTGACAGCCTaGAGGGCCAAAGCCATAGTAGCCAGTAGCACAGACATCACAACG +
Preference number: 5 (lower is better)
Translates to: GTECSIRTTLAGLTA*RAKAIVASSTDITT
Trigger: CGTTGTGATGTCTGTGCTACTGGCTACTATGGCTTTGGCCCTGCAGGCTGTCAAGCCTGCCAGTGTAGTCCTGATGGAGCACTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TGTGGGGATCACAGGCATCAGGGTCCATGGGATCAATGTTTCCACTaGACTCACACAGTTGGCACCTGCCACCTGGCTTTGATGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CGDHRHQGPWDQCFH*THTVGTCHLALMGP
Trigger: GGGACCCATCAAAGCCAGGTGGCAGGTGCCAACTGTGTGAGTGCAGTGGAAACATTGATCCCATGGACCCTGATGCCTGTGATCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp GTCAGGCTCAGGGTGTGGGCATGTGCAGAGAGCCGTCCCAGTGCCTaGTGGTTGGCCAAATGTTGGCGGTTGAAGTTTTCTTTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VRLRVWACAESRPSA*WLAKCWRLKFSFWA
Trigger: TGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 90 bp TTCTGCCCTGGCTTGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTaGCAACGCCCTCACTGTTTGGTATTGGTCACCTACTTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: FCPGLCSQNTFSLPL*QRPHCLVLVTYLFP
Trigger: CGGGAACAAGTAGGTGACCAATACCAAACAGTGAGGGCGTTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CCTTCTCGACACTGGCACACAATTTGCTGGGAATATCCATCCCGGTaGCAAGAAGTAGCAAAGTGTCGCTGGCTCCCAGGGCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PSRHWHTICWEYPSR*QEVAKCRWLPGPSG
Trigger: CCCTGAAGGCCCTGGGAGCCAGCGACACTTTGCTACTTCTTGCCACCGGGATGGATATTCCCAGCAAATTGTGTGCCAGTGTCGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TTCCAAAAGTTGGGGGCACAATGGTCACAGTTGAGGCCTTGGACATaGGGAAGGCATGGGCACTGCCCAGTGCTTGGGTCACAATGGCAC +
Preference number: 5 (lower is better)
Translates to: FQKLGAQWSQLRPWT*GRHGHCPVLGSQWH
Trigger: GTGCCATTGTGACCCAAGCACTGGGCAGTGCCCATGCCTTCCCCATGTCCAAGGCCTCAACTGTGACCATTGTGCCCCCAACTTTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CAATCTCACTGGCTAGGCGCTGGATCTGCTCGGGTGAGGCCGGGATaGAGATGTCTAGCACCCGAGTCGCTACCATTTCAATACTGTCAG +
Preference number: 5 (lower is better)
Translates to: QSHWLGAGSARVRPG*RCLAPESLPFQYCQ
Trigger: CTGACAGTATTGAAATGGTAGCGACTCGGGTGCTAGACATCTCCATCCCGGCCTCACCCGAGCAGATCCAGCGCCTAGCCAGTGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp GTCCGGCGTTGTGGCGCAAAGCTGGTGACTACATTCTGGATCCGATaGCTATTTGGGTTGTCTCGAGCAGAGAAGGGACGTCGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: VRRCGAKLVTTFWIR*LFGLSRAEKGRRES
Trigger: TGACTCCCGACGTCCCTTCTCTGCTCGAGACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065014.10
ENSMUST00000195483.6
CDS TCA 90 bp TCTCCGATTGCCACCAGGCTGTCCGGCGTTGTGGCGCAAAGCTGGTaGCTACATTCTGGATCCGATGACTATTTGGGTTGTCTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: SPIATRLSGVVAQSW*LHSGSDDYLGCLEQ
Trigger: CTGCTCGAGACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TTTGCACCGGCACTGGCCACCGTGAGGACTGCATTCAGAACTCAGTaGGCCTTGAGGGTCACACTGACATGGCAAGGCGCCATTGTAGAT +
Preference number: 5 (lower is better)
Translates to: FAPALATVRTAFRTQ*ALRVTLTWQGAIVD
Trigger: ATCTACAATGGCGCCTTGCCATGTCAGTGTGACCCTCAAGGCTCACTGAGTTCTGAATGCAGTCCTCACGGTGGCCAGTGCCGGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CATTGGAACCCCGTTCTCCGATTGCCACCAGGCTGTCCGGCGTTGTaGCGCAAAGCTGGTGACTACATTCTGGATCCGATGACTATTTGG +
Preference number: 5 (lower is better)
Translates to: HWNPVLRLPPGCPAL*RKAGDYILDPMTIW
Trigger: CCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGAACGGGGTTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TCCCGGATCTCCCTCCGTGGGTCAAGCAAGTTGTCTCCCAGTGTGTaGAGCCGGGTTAAGTTCACTCGTAGGTTGGTGATCTTCAACAGG +
Preference number: 5 (lower is better)
Translates to: SRISLRGSSKLSPSV*SRVKFTRRLVIFNR
Trigger: CCTGTTGAAGATCACCAACCTACGAGTGAACTTAACCCGGCTTCACACACTGGGAGACAACTTGCTTGACCCACGGAGGGAGATCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp CCTGCACAGCTGTTAGCTCTGCTTCTAACTGAGTCAGGCGCTCGGTaGTCTTCCCGATTTCATGACGTAGTCCCTCTGTGGCCTCTACAA +
Preference number: 5 (lower is better)
Translates to: PAQLLALLLTESGAR*SSRFHDVVPLWPLQ
Trigger: TTGTAGAGGCCACAGAGGGACTACGTCATGAAATCGGGAAGACCACCGAGCGCCTGACTCAGTTAGAAGCAGAGCTAACAGCTGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp GGTGCCAGGGAAGGTCCTGATAGAAATCCTGACACTGCTCACAGTTaGGTCCACGAGTATTGTGCTTGCAGATACAGGCTCCGTGTACCA +
Preference number: 5 (lower is better)
Translates to: GAREGPDRNPDTAHS*VHEYCACRYRLRVP
Trigger: TGGTACACGGAGCCTGTATCTGCAAGCACAATACTCGTGGACTCAACTGTGAGCAGTGTCAGGATTTCTATCAGGACCTTCCCTGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 90 bp TGGCTGAGGAAGTCTTTCACATTCTGGATAAGTTCTCGAAGCTCCTaGTTGGCCTGTTCCACCTGGCCCCTGGAAGCATTAGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: WLRKSFTFWISSRSS*LACSTWPLEALALS
Trigger: GGACAAGGCTAATGCTTCCAGGGGCCAGGTGGAACAGGCCAATCAGGAGCTTCGAGAACTTATCCAGAATGTGAAAGACTTCCTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp TTGTGGCGCAAAGCTGGTGACTACATTCTGGATCCGATGACTATTTaGGTTGTCTCGAGCAGAGAAGGGACGTCGGGAGTCACACAGGAA +
Preference number: 5 (lower is better)
Translates to: LWRKAGDYILDPMTI*VVSSREGTSGVTQE
Trigger: TTCCTGTGTGACTCCCGACGTCCCTTCTCTGCTCGAGACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065014.10
ENSMUST00000195483.6
CDS CCA 90 bp TCAGCTTCAGCTTGTAGGAGATGCCAGGCTCAAGGCAGACAGGTCTaGGAAACACCAAAAACCTGGTGTTTGGGTGAAGCATCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SASACRRCQAQGRQV*ETPKTWCLGEASPE
Trigger: TTCAGGGGATGCTTCACCCAAACACCAGGTTTTTGGTGTTTCCCAGACCTGTCTGCCTTGAGCCTGGCATCTCCTACAAGCTGAAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 90 bp GTGAGATTAAGCGCAAGCCCGTCTCTCTCCAGACCACTGAGTGCATaGTTGGCATTGAAGTTCTCATCCTGCACAGCTGTTAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VRLSASPSLSRPLSA*LALKFSSCTAVSSA
Trigger: AGCAGAGCTAACAGCTGTGCAGGATGAGAACTTCAATGCCAACCATGCACTCAGTGGTCTGGAGAGAGACGGGCTTGCGCTTAATCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CCGCCACCTTCTACCAGTGCCCGCTGCAGCTCTGCCTaGGTGTGCCGAGCCCGGCCCAGCGCTAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: PPPSTSARCSSA*VCRARPSARSA
Trigger: GGCAGATCTAGCGCTGGGCCGGGCTCGGCACACGCAGGCAGAGCTGCAGCGGGCACTGGTAGAAGGTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCGTGTGCCGAGCCCGGCCCAGCGCTAGATCTGCCGTaGCTGCTGCCCCACTGCAACCGAGGCCACCACAAC +
Preference number: 6 (lower is better)
Translates to: ACAEPGPALDLP*LLPHCNRGHHN
Trigger: GTTGTGGTGGCCTCGGTTGCAGTGGGGCAGCAGCCACGGCAGATCTAGCGCTGGGCCGGGCTCGGCACACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GGCCCAGCGCTAGATCTGCCGTGGCTGCTGCCCCACTaGAACCGAGGCCACCACAACGGGGCTGCCCATCTT +
Preference number: 6 (lower is better)
Translates to: GPALDLPWLLPH*NRGHHNGAAHL
Trigger: AAGATGGGCAGCCCCGTTGTGGTGGCCTCGGTTGCAGTGGGGCAGCAGCCACGGCAGATCTAGCGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CGCAGCCGCACAAAGCCTGGGCCAGTCCAGGACGGAGTCTCTCGGTaGGTCACCAGCCGCTCTACCACCTCAAGCCCCTGCCCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: RSRTKPGPVQDGVSR*VTSRSTTSSPCPWA
Trigger: TGCCCAAGGGCAGGGGCTTGAGGTGGTAGAGCGGCTGGTGACCAACCGAGAGACTCCGTCCTGGACTGGCCCAGGCTTTGTGCGGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CCCGGACGCTGCACCATCAGTTCCAGCTCTGCCCATTaGTCAGGGACCTGGGGCTCCCAGCGCAGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: PGRCTISSSSAH*SGTWGSQRSSR
Trigger: CCTGCTACTGCGCTGGGAGCCCCAGGTCCCTGAGCAATGGGCAGAGCTGGAACTGATGGTGCAGCGTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp AGGGCTGCCTGTGCTCGCTGCTGTGCCTCTTCTGCCTaGCGACGAGTCTCAGACACCCGGCTGAGGATGCCG +
Preference number: 6 (lower is better)
Translates to: RAACARCCASSA*RRVSDTRLRMP
Trigger: CGGCATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp TTCTGTCTCTCACCCTCGGCCCGGCTCCGTGCCCGGTaGGCATCTTGCAGTAGCTGTTCAGCCCGACGCACG +
Preference number: 6 (lower is better)
Translates to: FCLSPSARLRAR*ASCSSCSARRT
Trigger: CGTGCGTCGGGCTGAACAGCTACTGCAAGATGCGCACCGGGCACGGAGCCGGGCCGAGGGTGAGAGACAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GAGGCCCACTCCATCCCGACCGTGTGGGTACTGGGCTaGTGTCCCTCCAGGCCCTCAATCTGTCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: EAHSIPTVWVLG*CPSRPSICPGS
Trigger: CGACCCTGGACAGATTGAGGGCCTGGAGGGACACCAGCCCAGTACCCACACGGTCGGGATGGAGTGGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194147.2
CDS CAA 72 bp CAGCCCGACGCACGTCGCCCATGGTATGGGCCAGGATaGTGTCCACGTCGGCCAGGCTTCGGACGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: QPDARRPWYGPG*CPRRPGFGRVL
Trigger: CAGAACGCGTCCGAAGCCTGGCCGACGTGGACACAATCCTGGCCCATACCATGGGCGACGTGCGTCGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp TCAAAGGCACCCAGCACTCCTGTTTGCTGCAACTCCTaGGCCCACTGCTCCAGGCGCCGCGTCCGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SKAPSTPVCCNS*AHCSRRRVRAA
Trigger: GGCTGCTCGGACGCGGCGCCTGGAGCAGTGGGCTCAGGAGTTGCAGCAAACAGGAGTGCTGGGTGCCTTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp CCTCTTCTGCCTGCCGACGAGTCTCAGACACCCGGCTaGGGATGCCGCCACCTTCTACCAGTGCCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLLPADESQTPG*GCRHLLPVPAA
Trigger: TGCAGCGGGCACTGGTAGAAGGTGGCGGCATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GTCCAGGGCTGCCTGTGCTCGCTGCTGTGCCTCTTCTaGCTGCCGACGAGTCTCAGACACCCGGCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: VQGCLCSLLCLF*LPTSLRHPAED
Trigger: ATCCTCAGCCGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GTAGCGGGACTCACACACTACATCATCCCAGCGACGTaGCGGGGCCAGTGGGATTCCCGGGAAGTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VAGLTHYIIPAT*RGQWDSREVSP
Trigger: GGGGCTGACTTCCCGGGAATCCCACTGGCCCCGCCACGTCGCTGGGATGATGTAGTGTGTGAGTCCCGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TTGCAGATACAGGCTCCGTGTACCATGCCCTCAGCATaGGCCGGCGCCCCTGGTGCAGGCGCACACTGTGAG +
Preference number: 6 (lower is better)
Translates to: LQIQAPCTMPSA*AGAPGAGAHCE
Trigger: CTCACAGTGTGCGCCTGCACCAGGGGCGCCGGCCCATGCTGAGGGCATGGTACACGGAGCCTGTATCTGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CCTGGTTCTCCTGAGGCCCACTCCATCCCGACCGTGTaGGTACTGGGCTGGTGTCCCTCCAGGCCCTCAATC +
Preference number: 6 (lower is better)
Translates to: PGSPEAHSIPTV*VLGWCPSRPSI
Trigger: GATTGAGGGCCTGGAGGGACACCAGCCCAGTACCCACACGGTCGGGATGGAGTGGGCCTCAGGAGAACCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194147.2
CDS TCA 72 bp GGAGTCACAAGGGGAGCTCCCAGGCACTGTGCCCCGTaGATTACACTGGCAACGCTGGCACCCTCGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GVTRGAPRHCAP*ITLATLAPSRV
Trigger: GACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp CGGTCATCCTTAGGCAGCACATGCCCGCACGGACTGTaGGCAGACACAGGCCCCGGACGCTGCACCATCAGT +
Preference number: 6 (lower is better)
Translates to: RSSLGSTCPHGL*ADTGPGRCTIS
Trigger: ACTGATGGTGCAGCGTCCGGGGCCTGTGTCTGCTCACAGTCCGTGCGGGCATGTGCTGCCTAAGGATGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GAGTATTGTGCTTGCAGATACAGGCTCCGTGTACCATaGCCTCAGCATGGGCCGGCGCCCCTGGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: EYCACRYRLRVP*PQHGPAPLVQA
Trigger: CGCCTGCACCAGGGGCGCCGGCCCATGCTGAGGGCATGGTACACGGAGCCTGTATCTGCAAGCACAATACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CGGTTGGTCACCAGCCGCTCTACCACCTCAAGCCCCTaGCCTTGGGCAGCCTCAGCCTCCCAGGTTAAATGG +
Preference number: 6 (lower is better)
Translates to: RLVTSRSTTSSP*PWAASASQVKW
Trigger: CCATTTAACCTGGGAGGCTGAGGCTGCCCAAGGGCAGGGGCTTGAGGTGGTAGAGCGGCTGGTGACCAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp TGGCACCTGCCACCTGGCTTTGATGGGTCCCCAAAGTaGCCGGGGGCACAAGCTTCACACCGAAGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: WHLPPGFDGSPK*PGAQASHRSPV
Trigger: CACAGGGCTTCGGTGTGAAGCTTGTGCCCCCGGGCACTTTGGGGACCCATCAAAGCCAGGTGGCAGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GGGTACTGCAAAGGTGGAGGCGTTGGCACGGCGCTCTaGCTCTGTGGACTGGCTGTGGGCATGTCGGATGCT +
Preference number: 6 (lower is better)
Translates to: GYCKGGGVGTAL*LCGLAVGMSDA
Trigger: AGCATCCGACATGCCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CCCACAAGGGCTGGTGGCACAGGGTGCGTCCCCTGGTaGCCCACACACCAACTCATTTATGCCCGTCAGGCT +
Preference number: 6 (lower is better)
Translates to: PTRAGGTGCVPW*PTHQLIYARQA
Trigger: AGCCTGACGGGCATAAATGAGTTGGTGTGTGGGGCACCAGGGGACGCACCCTGTGCCACCAGCCCTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GGGGAGCTCCCAGGCACTGTGCCCCGTGAATTACACTaGCAACGCTGGCACCCTCGAGGGTCACTGGCACTA +
Preference number: 6 (lower is better)
Translates to: GELPGTVPRELH*QRWHPRGSLAL
Trigger: TAGTGCCAGTGACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCCCAATCATGTGTTGGCGGCAGCGGCACTGACCGGTaGCCTCATCACACTGAGGATCCAAGGCACCGCCCA +
Preference number: 6 (lower is better)
Translates to: AQSCVGGSGTDR*PHHTEDPRHRP
Trigger: TGGGCGGTGCCTTGGATCCTCAGTGTGATGAGGCCACCGGTCAGTGCCGCTGCCGCCAACACATGATTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TCCGACGCCGGGTATCTGCTGAGTTGCTCACAGGGCTaGGTACTGCAAAGGTGGAGGCGTTGGCACGGCGCT +
Preference number: 6 (lower is better)
Translates to: SDAGYLLSCSQG*VLQRWRRWHGA
Trigger: AGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAGATACCCGGCGTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp AGTAGCTGTTCAGCCCGACGCACGTCGCCCATGGTATaGGCCAGGATTGTGTCCACGTCGGCCAGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: SSCSARRTSPMV*ARIVSTSARLR
Trigger: CCGAAGCCTGGCCGACGTGGACACAATCCTGGCCCATACCATGGGCGACGTGCGTCGGGCTGAACAGCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CTTGCAGTAGCTGTTCAGCCCGACGCACGTCGCCCATaGTATGGGCCAGGATTGTGTCCACGTCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LAVAVQPDARRP*YGPGLCPRRPG
Trigger: GCCTGGCCGACGTGGACACAATCCTGGCCCATACCATGGGCGACGTGCGTCGGGCTGAACAGCTACTGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp TCTGCTGAGTTGCTCACAGGGCTGGGTACTGCAAAGGTGGAGGCGTaGGCACGGCGCTCTGCCTCTGTGGACTGGCTGTGGGCATGTCGG +
Preference number: 6 (lower is better)
Translates to: SAELLTGLGTAKVEA*ARRSASVDWLWACR
Trigger: CCGACATGCCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CCCAGGCAAGCGCCTGTGTGGGTATCACACTCATCCGCACGCCCATaGCAGACACACGGCCGGCAATTAGGGAATCCCCACTGGCCACGT +
Preference number: 6 (lower is better)
Translates to: PRQAPVWVSHSSARP*QTHGRQLGNPHWPR
Trigger: ACGTGGCCAGTGGGGATTCCCTAATTGCCGGCCGTGTGTCTGCAATGGGCGTGCGGATGAGTGTGATACCCACACAGGCGCTTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CCCTCTGTGGCCTCTACAAGCTTCGCCGTAGAGGCGGCTGAGGCATaGCGGGCACTCATAATGGCCTGCACCATGCCTAGCTTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: PSVASTSFAVEAAEA*RALIMACTMPSFPC
Trigger: GCAGGGGAAGCTAGGCATGGTGCAGGCCATTATGAGTGCCCGCAATGCCTCAGCCGCCTCTACGGCGAAGCTTGTAGAGGCCACAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CTGCAACAGGTCCCGAGCCTCATCCCGCAGTTGTTCTGCCCTGGCTaGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTGCCAACGCCCT +
Preference number: 6 (lower is better)
Translates to: LQQVPSLIPQLFCPG*CSQNTFSLPLCQRP
Trigger: AGGGCGTTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp ATTAGCCTTGTCCAGGGCTGCCTGTGCTCGCTGCTGTaGCTCTTCTGCCTGCCGACGAGTCTCAGACACCCG +
Preference number: 6 (lower is better)
Translates to: ISLVQGCLCSLL*LFCLPTSLRHP
Trigger: CGGGTGTCTGAGACTCGTCGGCAGGCAGAAGAGGCACAGCAGCGAGCACAGGCAGCCCTGGACAAGGCTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp TTCCAGCCCATCCAGCTGGGCCGCTTTGCCCTCCAGTaGACGCTCGTTCTCCTCATATGTGCCCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FQPIQLGRFALQ*TLVLLICALQL
Trigger: GAGCTGGAGGGCACATATGAGGAGAACGAGCGTGCACTGGAGGGCAAAGCGGCCCAGCTGGATGGGCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp ACACACTACATCATCCCAGCGACGTGGCGGGGCCAGTaGGATTCCCGGGAAGTCAGCCCCGCAGTCATAGGA +
Preference number: 6 (lower is better)
Translates to: THYIIPATWRGQ*DSREVSPAVIG
Trigger: TCCTATGACTGCGGGGCTGACTTCCCGGGAATCCCACTGGCCCCGCCACGTCGCTGGGATGATGTAGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CTCCACTTCCTGACCTTCTCGCAGCCGCACAAAGCCTaGGCCAGTCCAGGACGGAGTCTCTCGGTTGGTCAC +
Preference number: 6 (lower is better)
Translates to: LHFLTFSQPHKA*ASPGRSLSVGH
Trigger: GTGACCAACCGAGAGACTCCGTCCTGGACTGGCCCAGGCTTTGTGCGGCTGCGAGAAGGTCAGGAAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TCAGACCTTCCTCATGGCAGCGGTAGCGTTCAAAGGTaGTACGGCGCTCCAGAGCAGCAGCATCGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: SDLPHGSGSVQR*YGAPEQQHRPH
Trigger: GTGGGGGCGATGCTGCTGCTCTGGAGCGCCGTACCACCTTTGAACGCTACCGCTGCCATGAGGAAGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp ACGAGCACACTGGTCACAGCGCACACCAGACACGCCTaGGCGGCAGCTACAGTGGCCTGTGGAACGATGACA +
Preference number: 6 (lower is better)
Translates to: TSTLVTAHTRHA*AAATVACGTMT
Trigger: TGTCATCGTTCCACAGGCCACTGTAGCTGCCGCCCAGGCGTGTCTGGTGTGCGCTGTGACCAGTGTGCTCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CAAGCAGGAAAAACCCCTGAGAAGCCACGAGCACACTaGTCACAGCGCACACCAGACACGCCTGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: QAGKTPEKPRAH*SQRTPDTPGRQ
Trigger: CTGCCGCCCAGGCGTGTCTGGTGTGCGCTGTGACCAGTGTGCTCGTGGCTTCTCAGGGGTTTTTCCTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CAAAGGTGGAGGCGTTGGCACGGCGCTCTGCCTCTGTaGACTGGCTGTGGGCATGTCGGATGCTGTCATAGG +
Preference number: 6 (lower is better)
Translates to: QRWRRWHGALPL*TGCGHVGCCHR
Trigger: CCTATGACAGCATCCGACATGCCCACAGCCAGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CTGCTGAGTTGCTCACAGGGCTGGGTACTGCAAAGGTaGAGGCGTTGGCACGGCGCTCTGCCTCTGTGGACT +
Preference number: 6 (lower is better)
Translates to: LLSCSQGWVLQR*RRWHGALPLWT
Trigger: AGTCCACAGAGGCAGAGCGCCGTGCCAACGCCTCCACCTTTGCAGTACCCAGCCCTGTGAGCAACTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp GTCCCGAGCCTCATCCCGCAGTTGTTCTGCCCTGGCTaGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: VPSLIPQLFCPG*CSQNTFSLPLC
Trigger: GCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp AGCGGCCTGCAACAGGTCCCGAGCCTCATCCCGCAGTaGTTCTGCCCTGGCTTGTGCAGCCAGAACACCTTC +
Preference number: 6 (lower is better)
Translates to: SGLQQVPSLIPQ*FCPGLCSQNTF
Trigger: GAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAGGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp ACCTGCCATCCTCTCCTGGACCCGCTGCAGGGTCTGCTCTGTGTTTaGTGTGTCAACCACTGCTCCCCAGATGGCACCCTGAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TCHPLLDPLQGLLCV*CVNHCSPDGTLSSS
Trigger: GGAGCTGCTCAGGGTGCCATCTGGGGAGCAGTGGTTGACACACAAAACACAGAGCAGACCCTGCAGCGGGTCCAGGAGAGGATGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CTTATCCTGAGCGGCCTGCAACAGGTCCCGAGCCTCATCCCGCAGTaGTTCTGCCCTGGCTTGTGCAGCCAGAACACCTTCAGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: LILSGLQQVPSLIPQ*FCPGLCSQNTFSLP
Trigger: CGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAGGCCGCTCAGGATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp ACAGTAGGGTTGAGGGCTATGCAAGCCACACGTGGATaGGGCCGTCAGTCTGTCCGCACGGCCCACCAACAG +
Preference number: 6 (lower is better)
Translates to: TVGLRAMQATRG*GRQSVRTAHQQ
Trigger: CTGTTGGTGGGCCGTGCGGACAGACTGACGGCCTCATCCACGTGTGGCTTGCATAGCCCTCAACCCTACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065014.10
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS TCA 72 bp GCCCTAGGCAAAGAGGTCACCAGGAACTCCACTTCCTaGCCTTCTCGCAGCCGCACAAAGCCTGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: ALGKEVTRNSTS*PSRSRTKPGPV
Trigger: GACTGGCCCAGGCTTTGTGCGGCTGCGAGAAGGTCAGGAAGTGGAGTTCCTGGTGACCTCTTTGCCTAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CACTACTGGAGTCACAAGGGGAGCTCCCAGGCACTGTaGCCCGTGAATTACACTGGCAACGCTGGCACCCTC +
Preference number: 6 (lower is better)
Translates to: HYWSHKGSSQAL*PVNYTGNAGTL
Trigger: GAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTCCAGTAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GCACCTGCCATCCTCTCCTGGACCCGCTGCAGGGTCTaGTCTGTGTTTTGTGTGTCAACCACTGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: APAILSWTRCRV*SVFCVSTTAPQ
Trigger: CTGGGGAGCAGTGGTTGACACACAAAACACAGAGCAGACCCTGCAGCGGGTCCAGGAGAGGATGGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CCGAGCCTCATCCCGCAGTTGTTCTGCCCTGGCTTGTaGAGCCAGAACACCTTCAGCCTTCCGCTCTGCCAA +
Preference number: 6 (lower is better)
Translates to: PSLIPQLFCPGL*SQNTFSLPLCQ
Trigger: TTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TCAGTCTGTCCGCACGGCCCACCAACAGGTCACCGGTaGCTGGATAGCAGCTTCCTCGAGAACAGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: SVCPHGPPTGHR*LDSSFLENSQV
Trigger: TACCTGGCTGTTCTCGAGGAAGCTGCTATCCAGCCACCGGTGACCTGTTGGTGGGCCGTGCGGACAGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065014.10
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS CCA 72 bp CGGTCACCAGACGCTTGCAGAAACAGGTTCCACTACTaGAGTCACAAGGGGAGCTCCCAGGCACTGTGCCCC +
Preference number: 6 (lower is better)
Translates to: RSPDACRNRFHY*SHKGSSQALCP
Trigger: GGGGCACAGTGCCTGGGAGCTCCCCTTGTGACTCCAGTAGTGGAACCTGTTTCTGCAAGCGTCTGGTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TTGGACATGGGGAAGGCATGGGCACTGCCCAGTGCTTaGGTCACAATGGCACAGGTCGGTAGATGGGCACCG +
Preference number: 6 (lower is better)
Translates to: LDMGKAWALPSA*VTMAQVGRWAP
Trigger: CGGTGCCCATCTACCGACCTGTGCCATTGTGACCCAAGCACTGGGCAGTGCCCATGCCTTCCCCATGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CACACCAACTCATTTATGCCCGTCAGGCTCAGGGTGTaGGCATGTGCAGAGAGCCGTCCCAGTGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: HTNSFMPVRLRV*ACAESRPSACW
Trigger: CCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAGCCTGACGGGCATAAATGAGTTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp ACAGGTCCCGAGCCTCATCCCGCAGTTGTTCTGCCCTaGCTTGTGCAGCCAGAACACCTTCAGCCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: TGPEPHPAVVLP*LVQPEHLQPSA
Trigger: AGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp GCGCCTGTGTGGGTATCACACTCATCCGCACGCCCATaGCAGACACACGGCCGGCAATTAGGGAATCCCCAC +
Preference number: 6 (lower is better)
Translates to: APVWVSHSSARP*QTHGRQLGNPH
Trigger: GTGGGGATTCCCTAATTGCCGGCCGTGTGTCTGCAATGGGCGTGCGGATGAGTGTGATACCCACACAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp GCCTCTACAAGCTTCGCCGTAGAGGCGGCTGAGGCATaGCGGGCACTCATAATGGCCTGCACCATGCCTAGC +
Preference number: 6 (lower is better)
Translates to: ASTSFAVEAAEA*RALIMACTMPS
Trigger: GCTAGGCATGGTGCAGGCCATTATGAGTGCCCGCAATGCCTCAGCCGCCTCTACGGCGAAGCTTGTAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp ATTGCAGACACACGGCCGGCAATTAGGGAATCCCCACTGGCCACGTaGACAGTGGTCACAGCGAAGACCAAAGGCACCAGGTCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: IADTRPAIRESPLAT*TVVTAKTKGTRSAG
Trigger: CCCTGCCGACCTGGTGCCTTTGGTCTTCGCTGTGACCACTGTCAACGTGGCCAGTGGGGATTCCCTAATTGCCGGCCGTGTGTCTGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GCACTGGCCACCGTGAGGACTGCATTCAGAACTCAGTaGGCCTTGAGGGTCACACTGACATGGCAAGGCGCC +
Preference number: 6 (lower is better)
Translates to: ALATVRTAFRTQ*ALRVTLTWQGA
Trigger: GGCGCCTTGCCATGTCAGTGTGACCCTCAAGGCTCACTGAGTTCTGAATGCAGTCCTCACGGTGGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp CACGGCCGGCAATTAGGGAATCCCCACTGGCCACGTTaGCAGTGGTCACAGCGAAGACCAAAGGCACCAGGT +
Preference number: 6 (lower is better)
Translates to: HGRQLGNPHWPR*QWSQRRPKAPG
Trigger: ACCTGGTGCCTTTGGTCTTCGCTGTGACCACTGTCAACGTGGCCAGTGGGGATTCCCTAATTGCCGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp CTCTGTGGCCTCTACAAGCTTCGCCGTAGAGGCGGCTaGGGCATTGCGGGCACTCATAATGGCCTGCACCAT +
Preference number: 6 (lower is better)
Translates to: LCGLYKLRRRGG*GIAGTHNGLHH
Trigger: ATGGTGCAGGCCATTATGAGTGCCCGCAATGCCTCAGCCGCCTCTACGGCGAAGCTTGTAGAGGCCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp TCCAGGGTCGGACCTAGCAGTCACTCCTCCACAATCTaGGAGACTCTGACGACCCTGCCCGCTGCAGACAAC +
Preference number: 6 (lower is better)
Translates to: SRVGPSSHSSTI*ETLTTLPAADN
Trigger: GTTGTCTGCAGCGGGCAGGGTCGTCAGAGTCTCTCAGATTGTGGAGGAGTGACTGCTAGGTCCGACCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194147.2
CDS GCA 72 bp AGTTGGATGGTGACCATTGGAACCCCGTTCTCCGATTaGCACCAGGCTGTCCGGCGTTGTGGCGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: SWMVTIGTPFSD*HQAVRRCGAKL
Trigger: CAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGAACGGGGTTCCAATGGTCACCATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GGCATTGCTGGCAGCGAGTGCCAACCACGTGTTCTTTaGAGCGACACTGGCCTGAGACCAGTCCTAGCACAG +
Preference number: 6 (lower is better)
Translates to: GIAGSECQPRVL*SDTGLRPVLAQ
Trigger: CTGTGCTAGGACTGGTCTCAGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CACAGACATCACAACGGCGTCCAACCACTCCAGGTTTaGACCGGCACTGGCCACCGTGAGGACTGCATTCAG +
Preference number: 6 (lower is better)
Translates to: HRHHNGVQPLQV*TGTGHREDCIQ
Trigger: CTGAATGCAGTCCTCACGGTGGCCAGTGCCGGTGCAAACCTGGAGTGGTTGGACGCCGTTGTGATGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp AGCTCTGTCGGGCAGCTTGCCCATGGAAGCCAGGCTTaGAATAGCCACAGTGGGGCCCCTCTGTGTTGTGTA +
Preference number: 6 (lower is better)
Translates to: SSVGQLAHGSQA*NSHSGAPLCCV
Trigger: TACACAACACAGAGGGGCCCCACTGTGGCTATTGCAAGCCTGGCTTCCATGGGCAAGCTGCCCGACAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CGTTTCAGTTTCAGGGCCTCCAGGAGGGCGTCTAATTaGCGAGCCCGCTCACCGGCAGAGTTCAGAGACTTC +
Preference number: 6 (lower is better)
Translates to: RFSFRASRRASN*RARSPAEFRDF
Trigger: GAAGTCTCTGAACTCTGCCGGTGAGCGGGCTCGGCAATTAGACGCCCTCCTGGAGGCCCTGAAACTGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp AGCCAGGTACATCCAAGGACGGGGCCTGGGCCAATGTaGCAGCCAGCACACTTAGAAGTAGGCCCAAGCGAA +
Preference number: 6 (lower is better)
Translates to: SQVHPRTGPGPM*QPAHLEVGPSE
Trigger: TTCGCTTGGGCCTACTTCTAAGTGTGCTGGCTGCCACATTGGCCCAGGCCCCGTCCTTGGATGTACCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065014.10
ENSMUST00000194147.2
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS CCA 72 bp CAATACAGTAGGGTTGAGGGCTATGCAAGCCACACGTaGATGAGGCCGTCAGTCTGTCCGCACGGCCCACCA +
Preference number: 6 (lower is better)
Translates to: QYSRVEGYASHT*MRPSVCPHGPP
Trigger: TGGTGGGCCGTGCGGACAGACTGACGGCCTCATCCACGTGTGGCTTGCATAGCCCTCAACCCTACTGTATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065014.10
ENSMUST00000195058.2
ENSMUST00000195483.6
CDS CCA 72 bp CCCGTTCTCCGATTGCCACCAGGCTGTCCGGCGTTGTaGCGCAAAGCTGGTGACTACATTCTGGATCCGATG +
Preference number: 6 (lower is better)
Translates to: PVLRLPPGCPAL*RKAGDYILDPM
Trigger: CATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp ACCCATAGGGTCACAGTCACAAGGACGGCACACAGCTaGGTCCCGCATGTCCTTGGTGGGGTCACGGTAGAA +
Preference number: 6 (lower is better)
Translates to: THRVTVTRTAHS*VPHVLGGVTVE
Trigger: TTCTACCGTGACCCCACCAAGGACATGCGGGACCCAGCTGTGTGCCGTCCTTGTGACTGTGACCCTATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CCAGGCACTGTGCCCCGTGAATTACACTGGCAACGCTaGCACCCTCGAGGGTCACTGGCACTAAGTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PGTVPRELHWQR*HPRGSLALSPK
Trigger: CTTTGGACTTAGTGCCAGTGACCCTCGAGGGTGCCAGCGTTGCCAGTGTAATTCACGGGGCACAGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp AACCCCGTTCTCCGATTGCCACCAGGCTGTCCGGCGTaGTGGCGCAAAGCTGGTGACTACATTCTGGATCCG +
Preference number: 6 (lower is better)
Translates to: NPVLRLPPGCPA*WRKAGDYILDP
Trigger: CGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGAACGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp CGGCATTGCTGGCAGCGAGTGCCAACCACGTGTTCTTaGCAGCGACACTGGCCTGAGACCAGTCCTAGCACA +
Preference number: 6 (lower is better)
Translates to: RHCWQRVPTTCS*QRHWPETSPST
Trigger: TGTGCTAGGACTGGTCTCAGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp ATGGTCCAGAAAAGGCCGGAAGTAGCCAGGCTGCACTaGTTCGCAGCGCCGCCCAATCATGTGTTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: MVQKRPEVARLH*FAAPPNHVLAA
Trigger: TGCCGCCAACACATGATTGGGCGGCGCTGCGAACAAGTGCAGCCTGGCTACTTCCGGCCTTTTCTGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp ACACGGCCGGCAATTAGGGAATCCCCACTGGCCACGTaGACAGTGGTCACAGCGAAGACCAAAGGCACCAGG +
Preference number: 6 (lower is better)
Translates to: TRPAIRESPLAT*TVVTAKTKGTR
Trigger: CCTGGTGCCTTTGGTCTTCGCTGTGACCACTGTCAACGTGGCCAGTGGGGATTCCCTAATTGCCGGCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp AAGCCATCACGGCATTGCTGGCAGCGAGTGCCAACCACGTGTTCTTaGCAGCGACACTGGCCTGAGACCAGTCCTAGCACAGGGTCATCA +
Preference number: 6 (lower is better)
Translates to: KPSRHCWQRVPTTCS*QRHWPETSPSTGSS
Trigger: TGATGACCCTGTGCTAGGACTGGTCTCAGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CCCTCGAGGGTCACTGGCACTAAGTCCAAAGAAGCCATCACGGCATaGCTGGCAGCGAGTGCCAACCACGTGTTCTTTGCAGCGACACTG +
Preference number: 6 (lower is better)
Translates to: PSRVTGTKSKEAITA*LAASANHVFFAATL
Trigger: CAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGACTTAGTGCCAGTGACCCTCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CAATGTTTCCACTGCACTCACACAGTTGGCACCTGCCACCTGGCTTaGATGGGTCCCCAAAGTGCCCGGGGGCACAAGCTTCACACCGAA +
Preference number: 6 (lower is better)
Translates to: QCFHCTHTVGTCHLA*MGPQSARGHKLHTE
Trigger: TTCGGTGTGAAGCTTGTGCCCCCGGGCACTTTGGGGACCCATCAAAGCCAGGTGGCAGGTGCCAACTGTGTGAGTGCAGTGGAAACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GCACCAAGACGTGGGGCTGCAGGACCAGCGAGTCAATaGGTAATCCAGAGTAGGAGGTTTCAGGCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: APRRGAAGPASQ*VIQSRRFQAGL
Trigger: GAGCCCAGCCTGAAACCTCCTACTCTGGATTACTCATTGACTCGCTGGTCCTGCAGCCCCACGTCTTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GTCCAAAGAAGCCATCACGGCATTGCTGGCAGCGAGTaGCAACCACGTGTTCTTTGCAGCGACACTGGCCTG +
Preference number: 6 (lower is better)
Translates to: VQRSHHGIAGSE*QPRVLCSDTGL
Trigger: CAGGCCAGTGTCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GACAGCGGTCACAGCCATGTCCGGTCACCAGACGCTTaGAGAAACAGGTTCCACTACTGGAGTCACAAGGGG +
Preference number: 6 (lower is better)
Translates to: DSGHSHVRSPDA*RNRFHYWSHKG
Trigger: CCCCTTGTGACTCCAGTAGTGGAACCTGTTTCTGCAAGCGTCTGGTGACCGGACATGGCTGTGACCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CTCCAGGTTTGCACCGGCACTGGCCACCGTGAGGACTaGATTCAGAACTCAGTGAGCCTTGAGGGTCACACT +
Preference number: 6 (lower is better)
Translates to: LQVCTGTGHRED*IQNSVSLEGHT
Trigger: AGTGTGACCCTCAAGGCTCACTGAGTTCTGAATGCAGTCCTCACGGTGGCCAGTGCCGGTGCAAACCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GCACTGTCCACTAGTCCCTTCACAGAGGGCACTGAGTaGTCCATCAGGACTACACTGGCAGGCTTGACAGCC +
Preference number: 6 (lower is better)
Translates to: ALSTSPFTEGTE*SIRTTLAGLTA
Trigger: GGCTGTCAAGCCTGCCAGTGTAGTCCTGATGGAGCACTCAGTGCCCTCTGTGAAGGGACTAGTGGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CTGCAGGGTCTGCTCTGTGTTTTGTGTGTCAACCACTaGTCCCCAGATGGCACCCTGAGCAGCTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LQGLLCVLCVNH*SPDGTLSSSLC
Trigger: GCACAAGGAGCTGCTCAGGGTGCCATCTGGGGAGCAGTGGTTGACACACAAAACACAGAGCAGACCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CTTTGCCCTCCAGTGCACGCTCGTTCTCCTCATATGTaGCCTCCAGCTCCTGTAGCCGCTGCAGCTTATCCT +
Preference number: 6 (lower is better)
Translates to: LCPPVHARSPHM*PPAPVAAAAYP
Trigger: AGGATAAGCTGCAGCGGCTACAGGAGCTGGAGGGCACATATGAGGAGAACGAGCGTGCACTGGAGGGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCTCTGTGTTTTGTGTGTCAACCACTGCTCCCCAGATaGCACCCTGAGCAGCTCCTTGTGCCCTCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: ALCFVCQPLLPR*HPEQLLVPSEP
Trigger: AGGCTCAGAGGGCACAAGGAGCTGCTCAGGGTGCCATCTGGGGAGCAGTGGTTGACACACAAAACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp GGCTGGCAGCCACGGCCACTGGTGAAGTTCCAAAAGTaGGGGGCACAATGGTCACAGTTGAGGCCTTGGACA +
Preference number: 6 (lower is better)
Translates to: GWQPRPLVKFQK*GAQWSQLRPWT
Trigger: TGTCCAAGGCCTCAACTGTGACCATTGTGCCCCCAACTTTTGGAACTTCACCAGTGGCCGTGGCTGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp GCAGAGAGCCGTCCCAGTGCCTGCTGGTTGGCCAAATGTTGGCGGTaGAAGTTTTCTTTTTGGGCACCCATTAGCACTTCCGTCCGACGC +
Preference number: 6 (lower is better)
Translates to: AESRPSACWLAKCWR*KFSFWAPISTSVRR
Trigger: GCGTCGGACGGAAGTGCTAATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GGTGACAAGCACAAGGCTGGCAGCCACGGCCACTGGTaGAGTTCCAAAAGTTGGGGGCACAATGGTCACAGT +
Preference number: 6 (lower is better)
Translates to: GDKHKAGSHGHW*SSKSWGHNGHS
Trigger: ACTGTGACCATTGTGCCCCCAACTTTTGGAACTTCACCAGTGGCCGTGGCTGCCAGCCTTGTGCTTGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp TGCTCCATCAGGACTACACTGGCAGGCTTGACAGCCTaGAGGGCCAAAGCCATAGTAGCCAGTAGCACAGAC +
Preference number: 6 (lower is better)
Translates to: CSIRTTLAGLTA*RAKAIVASSTD
Trigger: GTCTGTGCTACTGGCTACTATGGCTTTGGCCCTGCAGGCTGTCAAGCCTGCCAGTGTAGTCCTGATGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GAGGCGGCTGAGGCATTGCGGGCACTCATAATGGCCTaGACCATGCCTAGCTTCCCCTGCATGTTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: EAAEALRALIMA*TMPSFPCMFKK
Trigger: CTTTTTGAACATGCAGGGGAAGCTAGGCATGGTGCAGGCCATTATGAGTGCCCGCAATGCCTCAGCCGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CTGGGCACTGCCTGCTGTTTCTTCCGCTGTAGATGCTaGCAGGCTATTTCCTGCCCGTTTCAGTTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LGTACCFFRCRC*QAISCPFQFQG
Trigger: GCCCTGAAACTGAAACGGGCAGGAAATAGCCTGGCAGCATCTACAGCGGAAGAAACAGCAGGCAGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GGCTTGTGCAGCCAGAACACCTTCAGCCTTCCGCTCTaGCAACGCCCTCACTGTTTGGTATTGGTCACCTAC +
Preference number: 6 (lower is better)
Translates to: GLCSQNTFSLPL*QRPHCLVLVTY
Trigger: GTAGGTGACCAATACCAAACAGTGAGGGCGTTGGCAGAGCGGAAGGCTGAAGGTGTTCTGGCTGCACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp AAACTCAGCTTCCAGGTCCAGTTGGATGGTGACCATTaGAACCCCGTTCTCCGATTGCCACCAGGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: KLSFQVQLDGDH*NPVLRLPPGCP
Trigger: CGGACAGCCTGGTGGCAATCGGAGAACGGGGTTCCAATGGTCACCATCCAACTGGACCTGGAAGCTGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp GACCATTGGAACCCCGTTCTCCGATTGCCACCAGGCTGTCCGGCGTaGTGGCGCAAAGCTGGTGACTACATTCTGGATCCGATGACTATT +
Preference number: 6 (lower is better)
Translates to: DHWNPVLRLPPGCPA*WRKAGDYILDPMTI
Trigger: AATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGCAATCGGAGAACGGGGTTCCAATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp CTCAGGGTGTGGGCATGTGCAGAGAGCCGTCCCAGTGCCTGCTGGTaGGCCAAATGTTGGCGGTTGAAGTTTTCTTTTTGGGCACCCATT +
Preference number: 6 (lower is better)
Translates to: LRVWACAESRPSACW*AKCWRLKFSFWAPI
Trigger: AATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACACCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GCCACCAGGCTGTCCGGCGTTGTGGCGCAAAGCTGGTaGCTACATTCTGGATCCGATGACTATTTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: ATRLSGVVAQSW*LHSGSDDYLGC
Trigger: ACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACAACGCCGGACAGCCTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp CAGCCATGTCAAAGTGGCAGCTATGAGTATGCCCGTTaGACTCACACTTCCGACAGGCGTGAGTATGGCCGT +
Preference number: 6 (lower is better)
Translates to: QPCQSGSYEYAR*THTSDRREYGR
Trigger: ACGGCCATACTCACGCCTGTCGGAAGTGTGAGTGCAACGGGCATACTCATAGCTGCCACTTTGACATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CTGGCACTAAGTCCAAAGAAGCCATCACGGCATTGCTaGCAGCGAGTGCCAACCACGTGTTCTTTGCAGCGA +
Preference number: 6 (lower is better)
Translates to: LALSPKKPSRHC*QRVPTTCSLQR
Trigger: TCGCTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGACTTAGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCATCGCCCCCACTAAACATCTCTAGCACCAAGACGTaGGGCTGCAGGACCAGCGAGTCAATGAGTAATCCA +
Preference number: 6 (lower is better)
Translates to: ASPPLNISSTKT*GCRTSESMSNP
Trigger: TGGATTACTCATTGACTCGCTGGTCCTGCAGCCCCACGTCTTGGTGCTAGAGATGTTTAGTGGGGGCGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp CACTGGCACACAATTTGCTGGGAATATCCATCCCGGTaGCAAGAAGTAGCAAAGTGTCGCTGGCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: HWHTICWEYPSR*QEVAKCRWLPG
Trigger: CCCTGGGAGCCAGCGACACTTTGCTACTTCTTGCCACCGGGATGGATATTCCCAGCAAATTGTGTGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp ATTGCCCCGTGTGGGGATCACAGGCATCAGGGTCCATaGGATCAATGTTTCCACTGCACTCACACAGTTGGC +
Preference number: 6 (lower is better)
Translates to: IAPCGDHRHQGP*DQCFHCTHTVG
Trigger: GCCAACTGTGTGAGTGCAGTGGAAACATTGATCCCATGGACCCTGATGCCTGTGATCCCCACACGGGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp ATAGATGACCTCGCCTTCCGTAGACGGCTCGATTTCTaGGTAGCGGGACTCACACACTACATCATCCCAGCG +
Preference number: 6 (lower is better)
Translates to: IDDLAFRRRLDF*VAGLTHYIIPA
Trigger: CGCTGGGATGATGTAGTGTGTGAGTCCCGCTACTCAGAAATCGAGCCGTCTACGGAAGGCGAGGTCATCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp TCCCTCCGTGGGTCAAGCAAGTTGTCTCCCAGTGTGTaGAGCCGGGTTAAGTTCACTCGTAGGTTGGTGATC +
Preference number: 6 (lower is better)
Translates to: SLRGSSKLSPSV*SRVKFTRRLVI
Trigger: GATCACCAACCTACGAGTGAACTTAACCCGGCTTCACACACTGGGAGACAACTTGCTTGACCCACGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp TCACTGGCACTAAGTCCAAAGAAGCCATCACGGCATTaGTGGCAGCGAGTGCCAACCACGTGTTCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: SLALSPKKPSRH*WQRVPTTCSLQ
Trigger: CTGCAAAGAACACGTGGTTGGCACTCGCTGCCAGCAATGCCGTGATGGCTTCTTTGGACTTAGTGCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS GCA 72 bp GCACCATGCCTAGCTTCCCCTGCATGTTCAAAAAGCTaGTCTCAAAGGCACCCAGCACTCCTGTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: APCLASPACSKS*SQRHPALLFAA
Trigger: TGCAGCAAACAGGAGTGCTGGGTGCCTTTGAGAGCAGCTTTTTGAACATGCAGGGGAAGCTAGGCATGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp AGCGCAAGCCCGTCTCTCTCCAGACCACTGAGTGCATaGTTGGCATTGAAGTTCTCATCCTGCACAGCTGTT +
Preference number: 6 (lower is better)
Translates to: SASPSLSRPLSA*LALKFSSCTAV
Trigger: AACAGCTGTGCAGGATGAGAACTTCAATGCCAACCATGCACTCAGTGGTCTGGAGAGAGACGGGCTTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GTGTGGGCATGTGCAGAGAGCCGTCCCAGTGCCTGCTaGTTGGCCAAATGTTGGCGGTTGAAGTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: VWACAESRPSAC*LAKCWRLKFSF
Trigger: AAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACGGCTCTCTGCACATGCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp GCAAGCCCGTCTCTCTCCAGACCACTGAGTGCATGGTaGGCATTGAAGTTCTCATCCTGCACAGCTGTTAGC +
Preference number: 6 (lower is better)
Translates to: ASPSLSRPLSAW*ALKFSSCTAVS
Trigger: GCTAACAGCTGTGCAGGATGAGAACTTCAATGCCAACCATGCACTCAGTGGTCTGGAGAGAGACGGGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GTCCCAGTGCCTGCTGGTTGGCCAAATGTTGGCGGTTaGAGTTTTCTTTTTGGGCACCCATTAGCACTTCCG +
Preference number: 6 (lower is better)
Translates to: VPVPAGWPNVGG*SFLFGHPLALP
Trigger: CGGAAGTGCTAATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCAGACAGGTCTGGGAAACACCAAAAACCTGGTGTTTaGGTGAAGCATCCCCTGAATGCGGTCATCCTTAGG +
Preference number: 6 (lower is better)
Translates to: ADRSGKHQKPGV*VKHPLNAVILR
Trigger: CCTAAGGATGACCGCATTCAGGGGATGCTTCACCCAAACACCAGGTTTTTGGTGTTTCCCAGACCTGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCTCAAGGCAGACAGGTCTGGGAAACACCAAAAACCTaGTGTTTGGGTGAAGCATCCCCTGAATGCGGTCAT +
Preference number: 6 (lower is better)
Translates to: AQGRQVWETPKT*CLGEASPECGH
Trigger: ATGACCGCATTCAGGGGATGCTTCACCCAAACACCAGGTTTTTGGTGTTTCCCAGACCTGTCTGCCTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp GCTTGTAGGAGATGCCAGGCTCAAGGCAGACAGGTCTaGGAAACACCAAAAACCTGGTGTTTGGGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: ACRRCQAQGRQV*ETPKTWCLGEA
Trigger: TGCTTCACCCAAACACCAGGTTTTTGGTGTTTCCCAGACCTGTCTGCCTTGAGCCTGGCATCTCCTACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TCTGTGTTGTGTAAACAACGCAAGCATTGCCCCGTGTaGGGATCACAGGCATCAGGGTCCATGGGATCAATG +
Preference number: 6 (lower is better)
Translates to: SVLCKQRKHCPV*GSQASGSMGSM
Trigger: CATTGATCCCATGGACCCTGATGCCTGTGATCCCCACACGGGGCAATGCTTGCGTTGTTTACACAACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CCA 72 bp TGGTTGGCCAAATGTTGGCGGTTGAAGTTTTCTTTTTaGGCACCCATTAGCACTTCCGTCCGACGCCGGGTA +
Preference number: 6 (lower is better)
Translates to: WLAKCWRLKFSF*APISTSVRRRV
Trigger: TACCCGGCGTCGGACGGAAGTGCTAATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp CACAGGGTCATCATGAGAATCACAGCGACCACCATCTaGAGAACCCATAGGGTCACAGTCACAAGGACGGCA +
Preference number: 6 (lower is better)
Translates to: HRVIMRITATTI*RTHRVTVTRTA
Trigger: TGCCGTCCTTGTGACTGTGACCCTATGGGTTCTCAAGATGGTGGTCGCTGTGATTCTCATGATGACCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp CCGTCTCTCTCCAGACCACTGAGTGCATGGTTGGCATaGAAGTTCTCATCCTGCACAGCTGTTAGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PSLSRPLSAWLA*KFSSCTAVSSA
Trigger: AGCAGAGCTAACAGCTGTGCAGGATGAGAACTTCAATGCCAACCATGCACTCAGTGGTCTGGAGAGAGACGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 72 bp CGTCCCAGTGCCTGCTGGTTGGCCAAATGTTGGCGGTaGAAGTTTTCTTTTTGGGCACCCATTAGCACTTCC +
Preference number: 6 (lower is better)
Translates to: RPSACWLAKCWR*KFSFWAPISTS
Trigger: GGAAGTGCTAATGGGTGCCCAAAAAGAAAACTTCAACCGCCAACATTTGGCCAACCAGCAGGCACTGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp TTCACACCGAAGCCCTGTGTAGCCTTCTCGACACTGGCACACAATTaGCTGGGAATATCCATCCCGGTGGCAAGAAGTAGCAAAGTGTCG +
Preference number: 6 (lower is better)
Translates to: FTPKPCVAFSTLAHN*LGISIPVARSSKVS
Trigger: CGACACTTTGCTACTTCTTGCCACCGGGATGGATATTCCCAGCAAATTGTGTGCCAGTGTCGAGAAGGCTACACAGGGCTTCGGTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS CAA 90 bp AGATTAAGCGCAAGCCCGTCTCTCTCCAGACCACTGAGTGCATGGTaGGCATTGAAGTTCTCATCCTGCACAGCTGTTAGCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RLSASPSLSRPLSAW*ALKFSSCTAVSSAS
Trigger: AGAAGCAGAGCTAACAGCTGTGCAGGATGAGAACTTCAATGCCAACCATGCACTCAGTGGTCTGGAGAGAGACGGGCTTGCGCTTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp TGTGGCGCAAAGCTGGTGACTACATTCTGGATCCGATaGCTATTTGGGTTGTCTCGAGCAGAGAAGGGACGT +
Preference number: 6 (lower is better)
Translates to: CGAKLVTTFWIR*LFGLSRAEKGR
Trigger: ACGTCCCTTCTCTGCTCGAGACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTTGCGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065014.10
ENSMUST00000195483.6
CDS CCA 72 bp AAAGCTGGTGACTACATTCTGGATCCGATGACTATTTaGGTTGTCTCGAGCAGAGAAGGGACGTCGGGAGTC +
Preference number: 6 (lower is better)
Translates to: KAGDYILDPMTI*VVSSREGTSGV
Trigger: GACTCCCGACGTCCCTTCTCTGCTCGAGACAACCCAAATAGTCATCGGATCCAGAATGTAGTCACCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065014.10
ENSMUST00000195483.6
CDS CCA 72 bp GAGAGCATAATAGTATTTTTCCCGGATCTCCCTCCGTaGGTCAAGCAAGTTGTCTCCCAGTGTGTGAAGCCG +
Preference number: 6 (lower is better)
Translates to: ESIIVFFPDLPP*VKQVVSQCVKP
Trigger: CGGCTTCACACACTGGGAGACAACTTGCTTGACCCACGGAGGGAGATCCGGGAAAAATACTATTATGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GTGTGTGAAGCCGGGTTAAGTTCACTCGTAGGTTGGTaGTCTTCAACAGGTTCTGAATCCGTGAGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: VCEAGLSSLVGW*SSTGSESVSCR
Trigger: CCTACAGCTCACGGATTCAGAACCTGTTGAAGATCACCAACCTACGAGTGAACTTAACCCGGCTTCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp GAAGGTCCTGATAGAAATCCTGACACTGCTCACAGTTaGGTCCACGAGTATTGTGCTTGCAGATACAGGCTC +
Preference number: 6 (lower is better)
Translates to: EGPDRNPDTAHS*VHEYCACRYRL
Trigger: GAGCCTGTATCTGCAAGCACAATACTCGTGGACTCAACTGTGAGCAGTGTCAGGATTTCTATCAGGACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10
CDS TCA 72 bp AAGTCTTTCACATTCTGGATAAGTTCTCGAAGCTCCTaGTTGGCCTGTTCCACCTGGCCCCTGGAAGCATTA +
Preference number: 6 (lower is better)
Translates to: KSFTFWISSRSS*LACSTWPLEAL
Trigger: TAATGCTTCCAGGGGCCAGGTGGAACAGGCCAATCAGGAGCTTCGAGAACTTATCCAGAATGTGAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065014.10