Pregenerated sensors for LAMB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002900Ensembl transcript IDs: ENSMUST00000002979.16, ENSMUST00000169088.8, ENSMUST00000170495.3, ENSMUST00000239496.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 72 bp | ATAGATGATGGGTTATTTGTAGATGACTGCCTCGGTTaGCGCGTGTGGTTTACCTTGGTCACCGAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IDDGLFVDDCLG*RVWFTLVTEPL Trigger: GAGGGGCTCGGTGACCAAGGTAAACCACACGCGCAAACCGAGGCAGTCATCTACAAATAACCCATCATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002979.16 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | GGTCGCCAGTGGCAGGGTAGCAGCTGCCTTCTGCGCAGCCATAGCTaGACTCCGGTTCCTGAGCGCACACTCGGGTGCCCCATAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GRQWQGSSCLLRSHS*TPVPERTLGCPIGL Trigger: CAGCCCTATGGGGCACCCGAGTGTGCGCTCAGGAACCGGAGTTCAGCTATGGCTGCGCAGAAGGCAGCTGCTACCCTGCCACTGGCGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170495.3 |
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| CDS TCA 90 bp | GGTCGCCAGTGGCAGGGTAGCAGCTGCCTTCTGCGCAGCCATAGCTaGACTCCGGTTCCTGAGCGCACACTCGGGTGCCCCATAGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: GRQWQGSSCLLRSHS*TPVPERTLGCPIGL Trigger: TAGCCCTATGGGGCACCCGAGTGTGCGCTCAGGAACCGGAGTTCAGCTATGGCTGCGCAGAAGGCAGCTGCTACCCTGCCACTGGCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | GCAGCATTGCAATTGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTaGCAGGTGTTGGGCGCACACCGGTCACAGTTCTGCCCGATCACA | + |
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Preference number: 5 (lower is better) Translates to: AALQLQGPQPVPLAS*QVLGAHRSQFCPIT Trigger: TGTGATCGGGCAGAACTGTGACCGGTGTGCGCCCAACACCTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTGCAATGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CAGACGAGGGGACGCGGCACGGGAAGGAGGACGCAGCAGGCAAGCTaGCTGTCTTTTCTTCGGGTCTTCCTTTCTGGAGAGGTAGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: QTRGRGTGRRTQQAS*LSFLRVFLSGEVAG Trigger: CCCCGCTACCTCTCCAGAAAGGAAGACCCGAAGAAAAGACAGGCAGCTTGCCTGCTGCGTCCTCCTTCCCGTGCCGCGTCCCCTCGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239496.2 |
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| CDS CCA 90 bp | ACCTCGTTACACTGCCGCCCAATCATGTGGGGCAGGCAGGAGCACTaGCCGGAGTCCTCGGAGCAGCTATTGTTCAGCGCCCCTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: TSLHCRPIMWGRQEH*PESSEQLLFSAPPR Trigger: CCTTGGAGGGGCGCTGAACAATAGCTGCTCCGAGGACTCCGGCCAGTGCTCCTGCCTGCCCCACATGATTGGGCGGCAGTGTAACGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CACTGGCACTGCCCTGTGAACTCGTTGCAGGATGGCCCAAAGGAATaGGCAGCATTGCAATTGCAGGGCCCGCAGCCAGTCCCGCTAGCC | + |
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Preference number: 5 (lower is better) Translates to: HWHCPVNSLQDGPKE*AALQLQGPQPVPLA Trigger: GGCTAGCGGGACTGGCTGCGGGCCCTGCAATTGCAATGCTGCGCATTCCTTTGGGCCATCCTGCAACGAGTTCACAGGGCAGTGCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | GGTGGCAGGGTGTGCAGTCAGGAAAGACCCCCGAGTAACCTCTGGTaGACTTGTCGCAGCGAGGACCCTCTACACCCTCCACACAGACAC | + |
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Preference number: 5 (lower is better) Translates to: GGRVCSQERPPSNLW*TCRSEDPLHPPHRH Trigger: GTGTCTGTGTGGAGGGTGTAGAGGGTCCTCGCTGCGACAAGTGCACCAGAGGTTACTCGGGGGTCTTTCCTGACTGCACACCCTGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | ACTGGTGGCAGGGTGTGCAGTCAGGAAAGACCCCCGAGTAACCTCTaGTGCACTTGTCGCAGCGAGGACCCTCTACACCCTCCACACAGA | + |
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Preference number: 5 (lower is better) Translates to: TGGRVCSQERPPSNL*CTCRSEDPLHPPHR Trigger: TCTGTGTGGAGGGTGTAGAGGGTCCTCGCTGCGACAAGTGCACCAGAGGTTACTCGGGGGTCTTTCCTGACTGCACACCCTGCCACCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CACAGACACACTGGCCCGTGGACTGGTCACACTGAGGTGTCTCAATaGCCCTGGGATCACAGTCACAGGCTCGGCATTCCACATCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HRHTGPWTGHTEVSQ*PWDHSHRLGIPHQG Trigger: ACCCTGATGTGGAATGCCGAGCCTGTGACTGTGATCCCAGGGGCATTGAGACACCTCAGTGTGACCAGTCCACGGGCCAGTGTGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CTCCAGCTGTTCTGCCAGCTCCTTCACGGTCTTGTCAAGGCTCTCTaGTTCTGCCTGCAGTGCGCCGAGCTCTCCAGCTGTGCTGTTACT | + |
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Preference number: 5 (lower is better) Translates to: LQLFCQLLHGLVKAL*FCLQCAELSSCAVT Trigger: AGTAACAGCACAGCTGGAGAGCTCGGCGCACTGCAGGCAGAAGCAGAGAGCCTTGACAAGACCGTGAAGGAGCTGGCAGAACAGCTGGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | GATCACCGTAGTAGCCAGCCAGGCACCTTTCGCAGTTGTGGCCCGTaGTGTAGTCCTGACAGCTCAGACACTCCCCTGTCACTGTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: DHRSSQPGTFRSCGP*CSPDSSDTPLSLCH Trigger: GTGACACAGTGACAGGGGAGTGTCTGAGCTGTCAGGACTACACCACGGGCCACAACTGCGAAAGGTGCCTGGCTGGCTACTACGGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | ACTGTCAGGACCATCAGGACAAGGGCAAGGGCGACAGTGGTCTCCTaGCCCAATGATGGGATCACCGTAGTAGCCAGCCAGGCACCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TVRTIRTRARATVVS*PNDGITVVASQAPF Trigger: GAAAGGTGCCTGGCTGGCTACTACGGTGATCCCATCATTGGGTCAGGAGACCACTGTCGCCCTTGCCCTTGTCCTGATGGTCCTGACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | CGGCCAGTTCGTCCAGGAGGCGTGCCTGTTCCTCCTGCTGCTCCTTaGACGGAGACTCTCGCTCCAACATCAGATCTTCTACTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RPVRPGGVPVPPAAP*TETLAPTSDLLLCL Trigger: GAGACAGAGTAGAAGATCTGATGTTGGAGCGAGAGTCTCCGTTCAAGGAGCAGCAGGAGGAACAGGCACGCCTCCTGGACGAACTGGCCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CCCCTCCAAGGTCACAGTCACAAGGTCGACACCCATCCAAATCATTaGTTAAACCCCAGTGCTGCGGCAGGCACTGGTCACAGCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PLQGHSHKVDTHPNH*LNPSAAAGTGHSAV Trigger: GACAGCGCTGTGACCAGTGCCTGCCGCAGCACTGGGGTTTAAGCAATGATTTGGATGGGTGTCGACCTTGTGACTGTGACCTTGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | TCTGCCAGCTCCTTCACGGTCTTGTCAAGGCTCTCTGCTTCTGCCTaGAGTGCGCCGAGCTCTCCAGCTGTGCTGTTACTCTGTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SASSFTVLSRLSASA*SAPSSPAVLLLCEA Trigger: AGCTTCACAGAGTAACAGCACAGCTGGAGAGCTCGGCGCACTGCAGGCAGAAGCAGAGAGCCTTGACAAGACCGTGAAGGAGCTGGCAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | CGAGGGAGGACAACGTATCTTGAGCCCGGTGACAAGGACACCACCTaGTTGTCATCATCGGGAACGGTGTTACCACATCGGCTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RGRTTYLEPGDKDTT*LSSSGTVLPHRLLA Trigger: AGCCAGCAGCCGATGTGGTAACACCGTTCCCGATGATGACAACCAGGTGGTGTCCTTGTCACCGGGCTCAAGATACGTTGTCCTCCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | CACCTGTTGCAGGTTCTTCCAACCACATTAGGACGGCACTGGCACTaGCCACCATTGGGGTCACACACAGAACTCAGAGATCCCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: HLLQVLPTTLGRHWH*PPLGSHTELRDPWG Trigger: CCCCCAGGGATCTCTGAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGGAAGAACCTGCAACAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | GGGGCACACCTGTTGCAGGTTCTTCCAACCACATTAGGACGGCACTaGCACTGGCCACCATTGGGGTCACACACAGAACTCAGAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: GAHLLQVLPTTLGRH*HWPPLGSHTELRDP Trigger: GGGATCTCTGAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGGAAGAACCTGCAACAGGTGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | TGGCCAGTGATCGCATCGCAGAAGGCACTGGCAGACCCTTGCAGATaGCAGTCACAAGGTTTGCATCCGTTGGGGCCAAAGCCAAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: WPVIASQKALADPCR*QSQGLHPLGPKPKV Trigger: CACCTTTGGCTTTGGCCCCAACGGATGCAAACCTTGTGACTGCCATCTGCAAGGGTCTGCCAGTGCCTTCTGCGATGCGATCACTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | GCGCTGGAAGGTTTCCCAGGCACTATTGGTGACCTCCCCATCGCCTaGGCCGCCAACAGTGAAGATGTCCAGCGATTTACAGTAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: ALEGFPGTIGDLPIA*AANSEDVQRFTVGH Trigger: ATGCCCTACTGTAAATCGCTGGACATCTTCACTGTTGGCGGCTCAGGCGATGGGGAGGTCACCAATAGTGCCTGGGAAACCTTCCAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | AAGCGAGTCGATGAACGTGTAAGGGCTCTCCACGTCACTGCCCGATaGCGTATACTGGGGCAGCTCCAACCTCACCGTGTAGTTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: KRVDERVRALHVTAR*RILGQLQPHRVVHS Trigger: GGAATGAACTACACGGTGAGGTTGGAGCTGCCCCAGTATACGGCATCGGGCAGTGACGTGGAGAGCCCTTACACGTTCATCGACTCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | CTGGTTGTCATCATCGGGAACGGTGTTACCACATCGGCTGCTGGCTaGAATCTTCCCCGGCCGCTGTACAGTGATGACAGCTTTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LVVIIGNGVTTSAAG*NLPRPLYSDDSFLP Trigger: TGGGAGAAAGCTGTCATCACTGTACAGCGGCCGGGGAAGATTCCAGCCAGCAGCCGATGTGGTAACACCGTTCCCGATGATGACAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | TCTGCAGTTGGGGCCACCACATTCACTTTCAGAACAGTCAGCCCCTaGAGGTGTTCCACAGGTCATCTGTGCAACAGCCGACAGGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: SAVGATTFTFRTVSP*RCSTGHLCNSRQVE Trigger: CTCGACCTGTCGGCTGTTGCACAGATGACCTGTGGAACACCTCCAGGGGCTGACTGTTCTGAAAGTGAATGTGGTGGCCCCAACTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | GTCTGCACATGCAGTGCCCGTGAACCATTCCTTCCACTTCTTCATTaGCTCCATCCACAGGGGCGCATTCACTGGCGTGGCCATAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VCTCSAREPFLPLLH*LHPQGRIHWRGHSR Trigger: TCTGCTATGGCCACGCCAGTGAATGCGCCCCTGTGGATGGAGTCAATGAAGAAGTGGAAGGAATGGTTCACGGGCACTGCATGTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | CCAGATTGGCTTCCTCGGCTTCGTAGATGTAGTGGTCCAGGGTGGTaGAGTAGTAACCGGACTCCACCTCGTTACACTGCCGCCCAATCA | + |
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Preference number: 5 (lower is better) Translates to: PDWLPRLRRCSGPGW*SSNRTPPRYTAAQS Trigger: TGATTGGGCGGCAGTGTAACGAGGTGGAGTCCGGTTACTACTTCACCACCCTGGACCACTACATCTACGAAGCCGAGGAAGCCAATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | ACTTTCAGAACAGTCAGCCCCTGGAGGTGTTCCACAGGTCATCTGTaGAACAGCCGACAGGTCGAGACTTTGCAGTTTGCCGGCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: TFRTVSPWRCSTGHL*NSRQVETLQFAGQF Trigger: GAACTGGCCGGCAAACTGCAAAGTCTCGACCTGTCGGCTGTTGCACAGATGACCTGTGGAACACCTCCAGGGGCTGACTGTTCTGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | TCCGGCCTTCAGCAGGTCTCCACGGCAAATCGTGGTAGAAATCCATaGACAGCTCACAGTTCAGGCCTTTGGTGTTGTGTCTGCACATGC | + |
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Preference number: 5 (lower is better) Translates to: SGLQQVSTANRGRNP*TAHSSGLWCCVCTC Trigger: GCATGTGCAGACACAACACCAAAGGCCTGAACTGTGAGCTGTGCATGGATTTCTACCACGATTTGCCGTGGAGACCTGCTGAAGGCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | AGCGCTCTCCCTCCACGTGCAATTTGCACCGACACTGACCAGCAATaGGACCCACAGAAAAATCAGTGTACCCATCACAGATCCCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SALPPRAICTDTDQQ*DPQKNQCTHHRSRH Trigger: ATGGCGGGATCTGTGATGGGTACACTGATTTTTCTGTGGGTCTCATTGCTGGTCAGTGTCGGTGCAAATTGCACGTGGAGGGAGAGCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | TCCAGGAAGGAATGCGGTCCTGAATGTACTGCCTTTCCACCACAATaGCTCCAGGCCCCAGATTGGCTTCCTCGGCTTCGTAGATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SRKECGPECTAFPPQ*LQAPDWLPRLRRCS Trigger: ACTACATCTACGAAGCCGAGGAAGCCAATCTGGGGCCTGGAGTCATTGTGGTGGAAAGGCAGTACATTCAGGACCGCATTCCTTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | TGGAGCCAATGTACCCAGGATCACAAACACACGCAAGCTGGAGAGTaGCGGGGTCTTGATAACAGCTCCTGGCAAACTGTCGTCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: WSQCTQDHKHTQAGE*RGLDNSSWQTVVHC Trigger: ACAGTGGACGACAGTTTGCCAGGAGCTGTTATCAAGACCCCGTCACTCTCCAGCTTGCGTGTGTTTGTGATCCTGGGTACATTGGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CACAGTGCTGTTGGGGTCTGTGGTGGAGGCATTCACCCGCTTCTCTaGCTCAAGAGACATCTGGAAATACTTGGTGATGCTATCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: HSAVGVCGGGIHPLL*LKRHLEILGDAIQG Trigger: GCCTTGGATAGCATCACCAAGTATTTCCAGATGTCTCTTGAGGCAGAGAAGCGGGTGAATGCCTCCACCACAGACCCCAACAGCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | GTACAGGCACTTGAGGCATCGTCCCGTCTCCTTGTCACAGGCTTCTaGATCGGTAGTGTCAATGTTGTGGTGGCACTGACATGGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: VQALEASSRLLVTGF*IGSVNVVVALTWLT Trigger: TGTCAACCATGTCAGTGCCACCACAACATTGACACTACCGATCCAGAAGCCTGTGACAAGGAGACGGGACGATGCCTCAAGTGCCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | TTACGCTTAAGCTCTTCCACGTTCCTCTCAAGCTTGCTGATGCGCTaGGAGGCGTTGGTCAGGGTTTCCTCAGAAGCTGCCGTTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LRLSSSTFLSSLLMR*EALVRVSSEAAVSD Trigger: ATCTGAAACGGCAGCTTCTGAGGAAACCCTGACCAACGCCTCCCAGCGCATCAGCAAGCTTGAGAGGAACGTGGAAGAGCTTAAGCGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | TCCAGGTCCAGTTGGATGGTCACGTTCTCCACACCATTTTCCGATTaGCACCAGATCTTAAGGCGGTTTGGAGCAAATGTGGTGACCACG | + |
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Preference number: 5 (lower is better) Translates to: SRSSWMVTFSTPFSD*HQILRRFGANVVTT Trigger: CGTGGTCACCACATTTGCTCCAAACCGCCTTAAGATCTGGTGGCAATCGGAAAATGGTGTGGAGAACGTGACCATCCAACTGGACCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CAAGGCGCCCTGAATATCGGAGTTTTTGATAAACTCCAGCTGTTCTaGCAGCTCCTTCACGGTCTTGTCAAGGCTCTCTGCTTCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: QGALNIGVFDKLQLF*QLLHGLVKALCFCL Trigger: CAGGCAGAAGCAGAGAGCCTTGACAAGACCGTGAAGGAGCTGGCAGAACAGCTGGAGTTTATCAAAAACTCCGATATTCAGGGCGCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | GCATTTCTTGTCCTCCTGCAGGTGGCTAACAATACAGTAGGGCTCTaGTTTGTGCAGTCCACATGTCGAAGTCACGGAGAGCTTTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: AFLVLLQVANNTVGL*FVQSTCRSHGELLR Trigger: GCGCAAAAGCTCTCCGTGACTTCGACATGTGGACTGCACAAACCAGAGCCCTACTGTATTGTTAGCCACCTGCAGGAGGACAAGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | TCTCTACAGAGTCCACGGTCTCTCGGTAGGGACCAATCACACCACTaGTTTTCAGAGCCTTGGCTTTCTCCAGGAATTTGTGGGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SLQSPRSLGRDQSHH*FSEPWLSPGICGSC Trigger: ACAGGACCCACAAATTCCTGGAGAAAGCCAAGGCTCTGAAAATCAGTGGTGTGATTGGTCCCTACCGAGAGACCGTGGACTCTGTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | GGCAGTCAGAGCCATTACAATGTTCCTTCACCGTGCCCAGGTAATTaGAGACACACTTTCTACAGTCTTGCCGAAGAGCATCGCCGTAGT | + |
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Preference number: 5 (lower is better) Translates to: GSQSHYNVPSPCPGN*RHTFYSLAEEHRRS Trigger: ACTACGGCGATGCTCTTCGGCAAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACGGTGAAGGAACATTGTAATGGCTCTGACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CAAGGCTCTCTGCTTCTGCCTGCAGTGCGCCGAGCTCTCCAGCTGTaGTGTTACTCTGTGAAGCTGTATCAGTTAATTTCACTTCTACCT | + |
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Preference number: 5 (lower is better) Translates to: QGSLLLPAVRRALQL*CYSVKLYQLISLLP Trigger: AGGTAGAAGTGAAATTAACTGATACAGCTTCACAGAGTAACAGCACAGCTGGAGAGCTCGGCGCACTGCAGGCAGAAGCAGAGAGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | GCAAATCGTGGTAGAAATCCATGCACAGCTCACAGTTCAGGCCTTTaGTGTTGTGTCTGCACATGCAGTGCCCGTGAACCATTCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ANRGRNPCTAHSSGL*CCVCTCSAREPFLP Trigger: TGGAAGGAATGGTTCACGGGCACTGCATGTGCAGACACAACACCAAAGGCCTGAACTGTGAGCTGTGCATGGATTTCTACCACGATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | TCGAGAGTCACAGATGATGTCATCCACTTTCTTCATGGGTCCAGTTaGAATGCCTGGGAACGAGCTCTCACAGTCGTAGGCGAAGTATCT | + |
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Preference number: 5 (lower is better) Translates to: SRVTDDVIHFLHGSS*NAWERALTVVGEVS Trigger: AGATACTTCGCCTACGACTGTGAGAGCTCGTTCCCAGGCATTTCAACTGGACCCATGAAGAAAGTGGATGACATCATCTGTGACTCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | CTCAGAGATCCCTGGGGGTCACATTCACAAGCAAGGCCCGTCTGGTaGATCAAGGCAGAAATGCTGAAGATAATGTTTCTGCAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LRDPWGSHSQARPVW*IKAEMLKIMFLQTS Trigger: AGATGTCTGCAGAAACATTATCTTCAGCATTTCTGCCTTGATTCACCAGACGGGCCTTGCTTGTGAATGTGACCCCCAGGGATCTCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS TCA 90 bp | GCTCTGGCAATGTCAGCTGCACTCTGCTGCAAAATAACCTCTACTTaGGAGAGGGTTTCAACTCGCTCCCGAATGTCTTCTGTTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALAMSAALCCKITST*ERVSTRSRMSSVRF Trigger: GAACCTAACAGAAGACATTCGGGAGCGAGTTGAAACCCTCTCTCAAGTAGAGGTTATTTTGCAGCAGAGTGCAGCTGACATTGCCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 90 bp | CTTTGTCACAGTGGCAGTCAGAGCCATTACAATGTTCCTTCACCGTaGCCAGGTAATTGCAGACACACTTTCTACAGTCTTGCCGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCHSGSQSHYNVPSP*PGNCRHTFYSLAEE Trigger: CTCTTCGGCAAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACGGTGAAGGAACATTGTAATGGCTCTGACTGCCACTGTGACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 90 bp | CTCTGCCTCCTCGAAGAGAATGCCAATGTTTTTCAGTGGTTCCGCTaGTGGGCTCTGGGCCAGGATGTCTTTTATCTCATTGACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCLLEENANVFQWFR*WALGQDVFYLIDFL Trigger: AAGAAAGTCAATGAGATAAAAGACATCCTGGCCCAGAGCCCAGCAGCGGAACCACTGAAAAACATTGGCATTCTCTTCGAGGAGGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | CTCCTTCTGTCGAGGGCTCAATGTCAGAATATCGAGAGTCACAGATaGTGTCATCCACTTTCTTCATGGGTCCAGTTGAAATGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSRAQCQNIESHR*CHPLSSWVQLKCLG Trigger: TCCCAGGCATTTCAACTGGACCCATGAAGAAAGTGGATGACATCATCTGTGACTCTCGATATTCTGACATTGAGCCCTCGACAGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 90 bp | TCTCTTAGCTTCCTCAAGCAACAGCTCAGCTCTGGCAATGTCAGCTaGACTCTGCTGCAAAATAACCTCTACTTGAGAGAGGGTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSFLKQQLSSGNVS*TLLQNNLYLREGFN Trigger: GTTGAAACCCTCTCTCAAGTAGAGGTTATTTTGCAGCAGAGTGCAGCTGACATTGCCAGAGCTGAGCTGTTGCTTGAGGAAGCTAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS TCA 90 bp | AGCGAATCAGGATTTCATACTCCATGGAATACGGTATGTTGTCAATaGAAAACTCCAAATAAGCCCCTTCAGGCACCCGGACGAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SESGFHTPWNTVCCQ*KTPNKPLQAPGRTQ Trigger: CTGGGTTCGTCCGGGTGCCTGAAGGGGCTTATTTGGAGTTTTTCATTGACAACATACCGTATTCCATGGAGTATGAAATCCTGATTCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 90 bp | ATACTGTCTAGATCAGCACTATCCTCAGTCAGGAAGTTTCTGATCTaGTTGATGAGGTTCCGCAGGTCCTCGTTGCTCTTGTCCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSRSALSSVRKFLI*LMRFRRSSLLLSTF Trigger: AAAAGTGGACAAGAGCAACGAGGACCTGCGGAACCTCATCAAGCAGATCAGAAACTTCCTGACTGAGGATAGTGCTGATCTAGACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 90 bp | TGGATATCCTCATCAGCTTGTTTAATCGCCTTCTCTGCTGCAACCTaGGCCTTTTCTGCTTCTTCTAATGCTTCCTTCACCATGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WISSSACLIAFSAAT*AFSASSNASFTMSA Trigger: TGCAGACATGGTGAAGGAAGCATTAGAAGAAGCAGAAAAGGCCCAGGTTGCAGCAGAGAAGGCGATTAAACAAGCTGATGAGGATATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 90 bp | GCTGCCGTTTCAGATTCAATCGATGTTAGCAGGTTTTGGGTTCCTTaGATATCCTCATCAGCTTGTTTAATCGCCTTCTCTGCTGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: AAVSDSIDVSRFWVP*ISSSACLIAFSAAT Trigger: GGTTGCAGCAGAGAAGGCGATTAAACAAGCTGATGAGGATATCCAAGGAACCCAAAACCTGCTAACATCGATTGAATCTGAAACGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 90 bp | AGGGTTTCAACTCGCTCCCGAATGTCTTCTGTTAGGTTCTGTAACTaGTGTGGCGTGCTAGGCATTTCCATTTTCAGTACTTCATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVSTRSRMSSVRFCN*CGVLGISIFSTSLA Trigger: TGCTAATGAAGTACTGAAAATGGAAATGCCTAGCACGCCACAGCAGTTACAGAACCTAACAGAAGACATTCGGGAGCGAGTTGAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 90 bp | ACAGAATATACTACTTTTTCGATATATTCTGCCTCCCCAGAGTTCTaGGCAGCTTTACGCTTAAGCTCTTCCACGTTCCTCTCAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEYTTFSIYSASPEF*AALRLSSSTFLSSL Trigger: CAAGCTTGAGAGGAACGTGGAAGAGCTTAAGCGTAAAGCTGCCCAGAACTCTGGGGAGGCAGAATATATCGAAAAAGTAGTATATTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 90 bp | GTGCTGTTACTCTGTGAAGCTGTATCAGTTAATTTCACTTCTACCTaGGCCATCTTTTCTGTGACATCTTTGGTTAGTTTCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLLLCEAVSVNFTST*AIFSVTSLVSFSAS Trigger: GGAGGCAGAGAAACTAACCAAAGATGTCACAGAAAAGATGGCGCAGGTAGAAGTGAAATTAACTGATACAGCTTCACAGAGTAACAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 90 bp | AAGCTGTATCAGTTAATTTCACTTCTACCTGCGCCATCTTTTCTGTaGCATCTTTGGTTAGTTTCTCTGCCTCCTCGAAGAGAATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLYQLISLLPAPSFL*HLWLVSLPPRRECQ Trigger: TTGGCATTCTCTTCGAGGAGGCAGAGAAACTAACCAAAGATGTCACAGAAAAGATGGCGCAGGTAGAAGTGAAATTAACTGATACAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 72 bp | GGCCCGCAGCCAGTCCCGCTAGCCAGCTGCCAGGTGTaGGGCGCACACCGGTCACAGTTCTGCCCGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPQPVPLASCQV*GAHRSQFCPIT Trigger: TGTGATCGGGCAGAACTGTGACCGGTGTGCGCCCAACACCTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CAATTGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTaGCAGGTGTTGGGCGCACACCGGTCACAGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLQGPQPVPLAS*QVLGAHRSQFC Trigger: GCAGAACTGTGACCGGTGTGCGCCCAACACCTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | TGGCAGGGTAGCAGCTGCCTTCTGCGCAGCCATAGCTaGACTCCGGTTCCTGAGCGCACACTCGGGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WQGSSCLLRSHS*TPVPERTLGCP Trigger: GGGGCACCCGAGTGTGCGCTCAGGAACCGGAGTTCAGCTATGGCTGCGCAGAAGGCAGCTGCTACCCTGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000170495.3 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | CACTGCCGCCCAATCATGTGGGGCAGGCAGGAGCACTaGCCGGAGTCCTCGGAGCAGCTATTGTTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCRPIMWGRQEH*PESSEQLLFSA Trigger: GGCGCTGAACAATAGCTGCTCCGAGGACTCCGGCCAGTGCTCCTGCCTGCCCCACATGATTGGGCGGCAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | CAATTGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTGCCAGGTGTaGGGCGCACACCGGTCACAGTTCTGCCCGATCACATTGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLQGPQPVPLASCQV*GAHRSQFCPITLGR Trigger: CCTTCCCAATGTGATCGGGCAGAACTGTGACCGGTGTGCGCCCAACACCTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | TGCCCTGTGAACTCGTTGCAGGATGGCCCAAAGGAATGCGCAGCATaGCAATTGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPVNSLQDGPKECAA*QLQGPQPVPLASCQ Trigger: CTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTGCAATGCTGCGCATTCCTTTGGGCCATCCTGCAACGAGTTCACAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | TTGCAGGATGGCCCAAAGGAATGCGCAGCATTGCAATaGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQDGPKECAALQ*QGPQPVPLASC Trigger: GCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTGCAATGCTGCGCATTCCTTTGGGCCATCCTGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | GTGAACTCGTTGCAGGATGGCCCAAAGGAATGCGCAGCATTGCAATaGCAGGGCCCGCAGCCAGTCCCGCTAGCCAGCTGCCAGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VNSLQDGPKECAALQ*QGPQPVPLASCQVL Trigger: CAACACCTGGCAGCTGGCTAGCGGGACTGGCTGCGGGCCCTGCAATTGCAATGCTGCGCATTCCTTTGGGCCATCCTGCAACGAGTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CACTGGCAGACCCTTGCAGATGGCAGTCACAAGGTTTaGATCCGTTGGGGCCAAAGCCAAAGGTGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HWQTLADGSHKV*IRWGQSQRCPG Trigger: CCCCGGGCACCTTTGGCTTTGGCCCCAACGGATGCAAACCTTGTGACTGCCATCTGCAAGGGTCTGCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | AGGCAGGAGCACTGGCCGGAGTCCTCGGAGCAGCTATaGTTCAGCGCCCCTCCAAGGTCACAGTCACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RQEHWPESSEQL*FSAPPRSQSQG Trigger: ACCTTGTGACTGTGACCTTGGAGGGGCGCTGAACAATAGCTGCTCCGAGGACTCCGGCCAGTGCTCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | CTGTCTCGCGTGAGGGCAGACTGCTCCACAGTGCTGTaGGGGTCTGTGGTGGAGGCATTCACCCGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSRVRADCSTVL*GSVVEAFTRFS Trigger: AGAGAAGCGGGTGAATGCCTCCACCACAGACCCCAACAGCACTGTGGAGCAGTCTGCCCTCACGCGAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | GTGGCACTGGCCAGTGATCGCATCGCAGAAGGCACTGGCAGACCCTaGCAGATGGCAGTCACAAGGTTTGCATCCGTTGGGGCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VALASDRIAEGTGRP*QMAVTRFASVGAKA Trigger: GGCTTTGGCCCCAACGGATGCAAACCTTGTGACTGCCATCTGCAAGGGTCTGCCAGTGCCTTCTGCGATGCGATCACTGGCCAGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | TTGTGCAGTCCACATGTCGAAGTCACGGAGAGCTTTTaGGCTCGGCCGATGAGAAGGTCGCCAGTGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCSPHVEVTESF*ARPMRRSPVAG Trigger: CCCTGCCACTGGCGACCTTCTCATCGGCCGAGCGCAAAAGCTCTCCGTGACTTCGACATGTGGACTGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | TGCCCTGTGAACTCGTTGCAGGATGGCCCAAAGGAATaGGCAGCATTGCAATTGCAGGGCCCGCAGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPVNSLQDGPKE*AALQLQGPQPV Trigger: GACTGGCTGCGGGCCCTGCAATTGCAATGCTGCGCATTCCTTTGGGCCATCCTGCAACGAGTTCACAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GTGTGCAGTCAGGAAAGACCCCCGAGTAACCTCTGGTaGACTTGTCGCAGCGAGGACCCTCTACACCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VCSQERPPSNLW*TCRSEDPLHPP Trigger: TGGAGGGTGTAGAGGGTCCTCGCTGCGACAAGTGCACCAGAGGTTACTCGGGGGTCTTTCCTGACTGCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | ACCCTTGCAGATGGCAGTCACAAGGTTTGCATCCGTTaGGGCCAAAGCCAAAGGTGCCCGGGGCACACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TLADGSHKVCIR*GQSQRCPGHTC Trigger: ACAGGTGTGCCCCGGGCACCTTTGGCTTTGGCCCCAACGGATGCAAACCTTGTGACTGCCATCTGCAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | AGTAGCCAGCCAGGCACCTTTCGCAGTTGTGGCCCGTaGTGTAGTCCTGACAGCTCAGACACTCCCCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSQPGTFRSCGP*CSPDSSDTPLS Trigger: TGACAGGGGAGTGTCTGAGCTGTCAGGACTACACCACGGGCCACAACTGCGAAAGGTGCCTGGCTGGCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | TGGGCGCACACCGGTCACAGTTCTGCCCGATCACATTaGGAAGGCACGAGCACTGACCAGTGGCTTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WAHTGHSSARSH*EGTSTDQWLCH Trigger: GTGACAAAGCCACTGGTCAGTGCTCGTGCCTTCCCAATGTGATCGGGCAGAACTGTGACCGGTGTGCGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | AGGGTGTGCAGTCAGGAAAGACCCCCGAGTAACCTCTaGTGCACTTGTCGCAGCGAGGACCCTCTACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: RVCSQERPPSNL*CTCRSEDPLHP Trigger: AGGGTGTAGAGGGTCCTCGCTGCGACAAGTGCACCAGAGGTTACTCGGGGGTCTTTCCTGACTGCACACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 72 bp | CCAACCACATTAGGACGGCACTGGCACTGGCCACCATaGGGGTCACACACAGAACTCAGAGATCCCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTLGRHWHWPP*GSHTELRDPWG Trigger: CCCCCAGGGATCTCTGAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | GCCCCTCCAAGGTCACAGTCACAAGGTCGACACCCATCCAAATCATaGCTTAAACCCCAGTGCTGCGGCAGGCACTGGTCACAGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: APPRSQSQGRHPSKS*LKPQCCGRHWSQRC Trigger: ACAGCGCTGTGACCAGTGCCTGCCGCAGCACTGGGGTTTAAGCAATGATTTGGATGGGTGTCGACCTTGTGACTGTGACCTTGGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 90 bp | GGGAGGACAACGTATCTTGAGCCCGGTGACAAGGACACCACCTGGTaGTCATCATCGGGAACGGTGTTACCACATCGGCTGCTGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRTTYLEPGDKDTTW*SSSGTVLPHRLLAG Trigger: TCCAGCCAGCAGCCGATGTGGTAACACCGTTCCCGATGATGACAACCAGGTGGTGTCCTTGTCACCGGGCTCAAGATACGTTGTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 90 bp | TCTTCTACTCTGTCTCGCGTGAGGGCAGACTGCTCCACAGTGCTGTaGGGGTCTGTGGTGGAGGCATTCACCCGCTTCTCTGCCTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSTLSRVRADCSTVL*GSVVEAFTRFSASR Trigger: TCTTGAGGCAGAGAAGCGGGTGAATGCCTCCACCACAGACCCCAACAGCACTGTGGAGCAGTCTGCCCTCACGCGAGACAGAGTAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | CCGGCCAGTTCGTCCAGGAGGCGTGCCTGTTCCTCCTGCTGCTCCTaGAACGGAGACTCTCGCTCCAACATCAGATCTTCTACTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PASSSRRRACSSCCS*NGDSRSNIRSSTLS Trigger: AGACAGAGTAGAAGATCTGATGTTGGAGCGAGAGTCTCCGTTCAAGGAGCAGCAGGAGGAACAGGCACGCCTCCTGGACGAACTGGCCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS TCA 72 bp | TCCACACAGACACACTGGCCCGTGGACTGGTCACACTaGGGTGTCTCAATGCCCCTGGGATCACAGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: STQTHWPVDWSH*GVSMPLGSQSQ Trigger: CTGTGACTGTGATCCCAGGGGCATTGAGACACCTCAGTGTGACCAGTCCACGGGCCAGTGTGTCTGTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 72 bp | GATGAACGTGTAAGGGCTCTCCACGTCACTGCCCGATaGCGTATACTGGGGCAGCTCCAACCTCACCGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DERVRALHVTAR*RILGQLQPHRV Trigger: TACACGGTGAGGTTGGAGCTGCCCCAGTATACGGCATCGGGCAGTGACGTGGAGAGCCCTTACACGTTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 72 bp | TCCTTCACGGTCTTGTCAAGGCTCTCTGCTTCTGCCTaGAGTGCGCCGAGCTCTCCAGCTGTGCTGTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SFTVLSRLSASA*SAPSSPAVLLL Trigger: GAGTAACAGCACAGCTGGAGAGCTCGGCGCACTGCAGGCAGAAGCAGAGAGCCTTGACAAGACCGTGAAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 72 bp | ATCATCGGGAACGGTGTTACCACATCGGCTGCTGGCTaGAATCTTCCCCGGCCGCTGTACAGTGATGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: IIGNGVTTSAAG*NLPRPLYSDDS Trigger: GCTGTCATCACTGTACAGCGGCCGGGGAAGATTCCAGCCAGCAGCCGATGTGGTAACACCGTTCCCGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 72 bp | CCATACTGGCAGAGCTGGCAATGGTCCCCTTCTGTGTaGTACAGGCACTTGAGGCATCGTCCCGTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PYWQSWQWSPSV*YRHLRHRPVSL Trigger: CAAGGAGACGGGACGATGCCTCAAGTGCCTGTACCACACAGAAGGGGACCATTGCCAGCTCTGCCAGTATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 72 bp | AGCTCTTCCACGTTCCTCTCAAGCTTGCTGATGCGCTaGGAGGCGTTGGTCAGGGTTTCCTCAGAAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTFLSSLLMR*EALVRVSSEAA Trigger: GGCAGCTTCTGAGGAAACCCTGACCAACGCCTCCCAGCGCATCAGCAAGCTTGAGAGGAACGTGGAAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 72 bp | TTTGTGCAGTCCACATGTCGAAGTCACGGAGAGCTTTaGCGCTCGGCCGATGAGAAGGTCGCCAGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FVQSTCRSHGEL*RSADEKVASGR Trigger: CCTGCCACTGGCGACCTTCTCATCGGCCGAGCGCAAAAGCTCTCCGTGACTTCGACATGTGGACTGCACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | GAACCAGCTGGGTCACAGGTACATGGTTCACAGAGATaGGGGTCCCGGATGTCCCTCTCAGGGTGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EPAGSQVHGSQR*GSRMSLSGCWK Trigger: CTTCCAGCACCCTGAGAGGGACATCCGGGACCCCAATCTCTGTGAACCATGTACCTGTGACCCAGCTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | CTCGCTCCAACATCAGATCTTCTACTCTGTCTCGCGTaGGGGCAGACTGCTCCACAGTGCTGTTGGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPTSDLLLCLA*GQTAPQCCWGL Trigger: CAGACCCCAACAGCACTGTGGAGCAGTCTGCCCTCACGCGAGACAGAGTAGAAGATCTGATGTTGGAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | CGTCCAGGAGGCGTGCCTGTTCCTCCTGCTGCTCCTTaGACGGAGACTCTCGCTCCAACATCAGATCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RPGGVPVPPAAP*TETLAPTSDLL Trigger: TAGAAGATCTGATGTTGGAGCGAGAGTCTCCGTTCAAGGAGCAGCAGGAGGAACAGGCACGCCTCCTGGACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | ACAGTCAGCCCCTGGAGGTGTTCCACAGGTCATCTGTaGAACAGCCGACAGGTCGAGACTTTGCAGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSPWRCSTGHL*NSRQVETLQFA Trigger: GGCAAACTGCAAAGTCTCGACCTGTCGGCTGTTGCACAGATGACCTGTGGAACACCTCCAGGGGCTGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | AACCAGCTGGGTCACAGGTACATGGTTCACAGAGATTaGGGTCCCGGATGTCCCTCTCAGGGTGCTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NQLGHRYMVHRD*GPGCPSQGAGS Trigger: ACTTCCAGCACCCTGAGAGGGACATCCGGGACCCCAATCTCTGTGAACCATGTACCTGTGACCCAGCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | ATCGCATCGCAGAAGGCACTGGCAGACCCTTGCAGATaGCAGTCACAAGGTTTGCATCCGTTGGGGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IASQKALADPCR*QSQGLHPLGPK Trigger: CTTTGGCCCCAACGGATGCAAACCTTGTGACTGCCATCTGCAAGGGTCTGCCAGTGCCTTCTGCGATGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CCA 72 bp | AGCTCACCAATGATAGCATCCCAGAGAGCAAAGCACTaGTGGCAGGGTGTGCAGTCAGGAAAGACCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPMIASQRAKH*WQGVQSGKTPE Trigger: CTCGGGGGTCTTTCCTGACTGCACACCCTGCCACCAGTGCTTTGCTCTCTGGGATGCTATCATTGGTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | GGGGCCACCACATTCACTTTCAGAACAGTCAGCCCCTaGAGGTGTTCCACAGGTCATCTGTGCAACAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GATTFTFRTVSP*RCSTGHLCNSR Trigger: TCGGCTGTTGCACAGATGACCTGTGGAACACCTCCAGGGGCTGACTGTTCTGAAAGTGAATGTGGTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS CAA 72 bp | ATAAACTCCAGCTGTTCTGCCAGCTCCTTCACGGTCTaGTCAAGGCTCTCTGCTTCTGCCTGCAGTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: INSSCSASSFTV*SRLSASACSAP Trigger: CGGCGCACTGCAGGCAGAAGCAGAGAGCCTTGACAAGACCGTGAAGGAGCTGGCAGAACAGCTGGAGTTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | TCGTCCAGGAGGCGTGCCTGTTCCTCCTGCTGCTCCTaGAACGGAGACTCTCGCTCCAACATCAGATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRRRACSSCCS*NGDSRSNIRSS Trigger: AGAAGATCTGATGTTGGAGCGAGAGTCTCCGTTCAAGGAGCAGCAGGAGGAACAGGCACGCCTCCTGGACGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | CAGGTTCTTCCAACCACATTAGGACGGCACTGGCACTGGCCACCATaGGGGTCACACACAGAACTCAGAGATCCCTGGGGGTCACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: QVLPTTLGRHWHWPP*GSHTELRDPWGSHS Trigger: TGAATGTGACCCCCAGGGATCTCTGAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGGAAGAACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | TCCCCTTCTGTGTGGTACAGGCACTTGAGGCATCGTCCCGTCTCCTaGTCACAGGCTTCTGGATCGGTAGTGTCAATGTTGTGGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPSVWYRHLRHRPVS*SQASGSVVSMLWWH Trigger: GTGCCACCACAACATTGACACTACCGATCCAGAAGCCTGTGACAAGGAGACGGGACGATGCCTCAAGTGCCTGTACCACACAGAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | ACGAACCCAGGTCCTGTCCAGGAAGGAATGCGGTCCTaGATGTACTGCCTTTCCACCACAATGACTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TNPGPVQEGMRS*MYCLSTTMTPG Trigger: GCCTGGAGTCATTGTGGTGGAAAGGCAGTACATTCAGGACCGCATTCCTTCCTGGACAGGACCTGGGTTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | GGTTTCCCAGGCACTATTGGTGACCTCCCCATCGCCTaGGCCGCCAACAGTGAAGATGTCCAGCGATTTACA | + |
|
Preference number: 6 (lower is better) Translates to: GFPGTIGDLPIA*AANSEDVQRFT Trigger: TGTAAATCGCTGGACATCTTCACTGTTGGCGGCTCAGGCGATGGGGAGGTCACCAATAGTGCCTGGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GGATGTCCCTCTCAGGGTGCTGGAAGTAGAACGGTTTaGACTGTTCACAGTTGCGCCCCATGGTGTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCPSQGAGSRTV*TVHSCAPWCCA Trigger: AGCACAACACCATGGGGCGCAACTGTGAACAGTGCAAACCGTTCTACTTCCAGCACCCTGAGAGGGACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GGTCACAGTCACAAGGTCGACACCCATCCAAATCATTaGTTAAACCCCAGTGCTGCGGCAGGCACTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GHSHKVDTHPNH*LNPSAAAGTGH Trigger: GTGACCAGTGCCTGCCGCAGCACTGGGGTTTAAGCAATGATTTGGATGGGTGTCGACCTTGTGACTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | CTGTTGCAGGTTCTTCCAACCACATTAGGACGGCACTaGCACTGGCCACCATTGGGGTCACACACAGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQVLPTTLGRH*HWPPLGSHTEL Trigger: GAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGGAAGAACCTGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | ACGTTCCTCTCAAGCTTGCTGATGCGCTGGGAGGCGTaGGTCAGGGTTTCCTCAGAAGCTGCCGTTTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TFLSSLLMRWEA*VRVSSEAAVSD Trigger: ATCTGAAACGGCAGCTTCTGAGGAAACCCTGACCAACGCCTCCCAGCGCATCAGCAAGCTTGAGAGGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | GTACCCAGGATCACAAACACACGCAAGCTGGAGAGTGACGGGGTCTaGATAACAGCTCCTGGCAAACTGTCGTCCACTGTCAGGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: VPRITNTRKLESDGV*ITAPGKLSSTVRTI Trigger: GATGGTCCTGACAGTGGACGACAGTTTGCCAGGAGCTGTTATCAAGACCCCGTCACTCTCCAGCTTGCGTGTGTTTGTGATCCTGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | TTCTGGGCAGCTTTACGCTTAAGCTCTTCCACGTTCCTCTCAAGCTaGCTGATGCGCTGGGAGGCGTTGGTCAGGGTTTCCTCAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FWAALRLSSSTFLSS*LMRWEALVRVSSEA Trigger: AGCTTCTGAGGAAACCCTGACCAACGCCTCCCAGCGCATCAGCAAGCTTGAGAGGAACGTGGAAGAGCTTAAGCGTAAAGCTGCCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | GTCCTCCTGCAGGTGGCTAACAATACAGTAGGGCTCTaGTTTGTGCAGTCCACATGTCGAAGTCACGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLLQVANNTVGL*FVQSTCRSHGE Trigger: CTCTCCGTGACTTCGACATGTGGACTGCACAAACCAGAGCCCTACTGTATTGTTAGCCACCTGCAGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | ACAACGTATCTTGAGCCCGGTGACAAGGACACCACCTaGTTGTCATCATCGGGAACGGTGTTACCACATCGG | + |
|
Preference number: 6 (lower is better) Translates to: TTYLEPGDKDTT*LSSSGTVLPHR Trigger: CCGATGTGGTAACACCGTTCCCGATGATGACAACCAGGTGGTGTCCTTGTCACCGGGCTCAAGATACGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | CAGGTTCTTCCAACCACATTAGGACGGCACTGGCACTaGCCACCATTGGGGTCACACACAGAACTCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QVLPTTLGRHWH*PPLGSHTELRD Trigger: ATCTCTGAGTTCTGTGTGTGACCCCAATGGTGGCCAGTGCCAGTGCCGTCCTAATGTGGTTGGAAGAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | CTTGAGGCATCGTCCCGTCTCCTTGTCACAGGCTTCTaGATCGGTAGTGTCAATGTTGTGGTGGCACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LEASSRLLVTGF*IGSVNVVVALT Trigger: TGTCAGTGCCACCACAACATTGACACTACCGATCCAGAAGCCTGTGACAAGGAGACGGGACGATGCCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | CCCCACACTTCTTCTCTCCTTCGTCAGTTCTGCAGTTaGGGCCACCACATTCACTTTCAGAACAGTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PHTSSLLRQFCS*GHHIHFQNSQP Trigger: GGGCTGACTGTTCTGAAAGTGAATGTGGTGGCCCCAACTGCAGAACTGACGAAGGAGAGAAGAAGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | AGGTCACAGTCACAAGGTCGACACCCATCCAAATCATaGCTTAAACCCCAGTGCTGCGGCAGGCACTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSQSQGRHPSKS*LKPQCCGRHWS Trigger: TGACCAGTGCCTGCCGCAGCACTGGGGTTTAAGCAATGATTTGGATGGGTGTCGACCTTGTGACTGTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | GTGTGGTACAGGCACTTGAGGCATCGTCCCGTCTCCTaGTCACAGGCTTCTGGATCGGTAGTGTCAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VWYRHLRHRPVS*SQASGSVVSML Trigger: CAACATTGACACTACCGATCCAGAAGCCTGTGACAAGGAGACGGGACGATGCCTCAAGTGCCTGTACCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | CCCCCACACTTCTTCTCTCCTTCGTCAGTTCTGCAGTaGGGGCCACCACATTCACTTTCAGAACAGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPHFFSPSSVLQ*GPPHSLSEQSA Trigger: GGCTGACTGTTCTGAAAGTGAATGTGGTGGCCCCAACTGCAGAACTGACGAAGGAGAGAAGAAGTGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | TTCCTTCACCGTGCCCAGGTAATTGCAGACACACTTTCTACAGTCTaGCCGAAGAGCATCGCCGTAGTACCCATACTGGCAGAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLHRAQVIADTLSTV*PKSIAVVPILAELA Trigger: TGCCAGCTCTGCCAGTATGGGTACTACGGCGATGCTCTTCGGCAAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACGGTGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | AGCTCTTCCACGTTCCTCTCAAGCTTGCTGATGCGCTGGGAGGCGTaGGTCAGGGTTTCCTCAGAAGCTGCCGTTTCAGATTCAATCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSTFLSSLLMRWEA*VRVSSEAAVSDSID Trigger: ATCGATTGAATCTGAAACGGCAGCTTCTGAGGAAACCCTGACCAACGCCTCCCAGCGCATCAGCAAGCTTGAGAGGAACGTGGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | CAGCGCTCTCCCTCCACGTGCAATTTGCACCGACACTaGCCAGCAATGAGACCCACAGAAAAATCAGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QRSPSTCNLHRH*PAMRPTEKSVY Trigger: GTACACTGATTTTTCTGTGGGTCTCATTGCTGGTCAGTGTCGGTGCAAATTGCACGTGGAGGGAGAGCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | TGTACCCAGGATCACAAACACACGCAAGCTGGAGAGTaGCGGGGTCTTGATAACAGCTCCTGGCAAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CTQDHKHTQAGE*RGLDNSSWQTV Trigger: GACAGTTTGCCAGGAGCTGTTATCAAGACCCCGTCACTCTCCAGCTTGCGTGTGTTTGTGATCCTGGGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | TGCACAGCTCACAGTTCAGGCCTTTGGTGTTGTGTCTaGACATGCAGTGCCCGTGAACCATTCCTTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CTAHSSGLWCCV*TCSAREPFLPL Trigger: AAGTGGAAGGAATGGTTCACGGGCACTGCATGTGCAGACACAACACCAAAGGCCTGAACTGTGAGCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CAGCAGGTCTCCACGGCAAATCGTGGTAGAAATCCATaGACAGCTCACAGTTCAGGCCTTTGGTGTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQVSTANRGRNP*TAHSSGLWCCV Trigger: GACACAACACCAAAGGCCTGAACTGTGAGCTGTGCATGGATTTCTACCACGATTTGCCGTGGAGACCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GTTGGGGTCTGTGGTGGAGGCATTCACCCGCTTCTCTaGCTCAAGAGACATCTGGAAATACTTGGTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VGVCGGGIHPLL*LKRHLEILGDA Trigger: AGCATCACCAAGTATTTCCAGATGTCTCTTGAGGCAGAGAAGCGGGTGAATGCCTCCACCACAGACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | ATCACAAACACACGCAAGCTGGAGAGTGACGGGGTCTaGATAACAGCTCCTGGCAAACTGTCGTCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ITNTRKLESDGV*ITAPGKLSSTV Trigger: GACAGTGGACGACAGTTTGCCAGGAGCTGTTATCAAGACCCCGTCACTCTCCAGCTTGCGTGTGTTTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | CGTGCCCAGGTAATTGCAGACACACTTTCTACAGTCTaGCCGAAGAGCATCGCCGTAGTACCCATACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RAQVIADTLSTV*PKSIAVVPILA Trigger: TGCCAGTATGGGTACTACGGCGATGCTCTTCGGCAAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | GCTGCTGGGCTCTGGGCCAGGATGTCTTTTATCTCATaGACTTTCTTCTCTACAGAGTCCACGGTCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGLWARMSFIS*TFFSTESTVSR Trigger: CCGAGAGACCGTGGACTCTGTAGAGAAGAAAGTCAATGAGATAAAAGACATCCTGGCCCAGAGCCCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GCTCACAGTTCAGGCCTTTGGTGTTGTGTCTGCACATaGAGTGCCCGTGAACCATTCCTTCCACTTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AHSSGLWCCVCT*SAREPFLPLLH Trigger: ATGAAGAAGTGGAAGGAATGGTTCACGGGCACTGCATGTGCAGACACAACACCAAAGGCCTGAACTGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS GCA 72 bp | CTGCTTCTGCCTGCAGTGCGCCGAGCTCTCCAGCTGTaGTGTTACTCTGTGAAGCTGTATCAGTTAATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLPAVRRALQL*CYSVKLYQLIS Trigger: TGAAATTAACTGATACAGCTTCACAGAGTAACAGCACAGCTGGAGAGCTCGGCGCACTGCAGGCAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | CCTGCGCATTCTGCTTCGCCTCATCTGCTCTCACTTTaGCTTCAGAGACCATCTTGGAGAGCTGTTCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: PAHSASPHLLSL*LQRPSWRAVRL Trigger: AAGTCGAACAGCTCTCCAAGATGGTCTCTGAAGCAAAAGTGAGAGCAGATGAGGCGAAGCAGAATGCGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | CTGATTTTCAGAGCCTTGGCTTTCTCCAGGAATTTGTGGGTCCTGTaGGTCAGCTCACCAATGATAGCATCCCAGAGAGCAAAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIFRALAFSRNLWVL*VSSPMIASQRAKHW Trigger: CCAGTGCTTTGCTCTCTGGGATGCTATCATTGGTGAGCTGACCAACAGGACCCACAAATTCCTGGAGAAAGCCAAGGCTCTGAAAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
||
| CDS TCA 72 bp | CCCTGGGGGTCACATTCACAAGCAAGGCCCGTCTGGTaGATCAAGGCAGAAATGCTGAAGATAATGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWGSHSQARPVW*IKAEMLKIMFL Trigger: CAGAAACATTATCTTCAGCATTTCTGCCTTGATTCACCAGACGGGCCTTGCTTGTGAATGTGACCCCCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | CCAATCACACCACTGATTTTCAGAGCCTTGGCTTTCTCCAGGAATTaGTGGGTCCTGTTGGTCAGCTCACCAATGATAGCATCCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PITPLIFRALAFSRN*WVLLVSSPMIASQR Trigger: TCTCTGGGATGCTATCATTGGTGAGCTGACCAACAGGACCCACAAATTCCTGGAGAAAGCCAAGGCTCTGAAAATCAGTGGTGTGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | AGTTGGATGGTCACGTTCTCCACACCATTTTCCGATTaGCACCAGATCTTAAGGCGGTTTGGAGCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: SWMVTFSTPFSD*HQILRRFGANV Trigger: CACATTTGCTCCAAACCGCCTTAAGATCTGGTGGCAATCGGAAAATGGTGTGGAGAACGTGACCATCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CTCGAAGAGAATGCCAATGTTTTTCAGTGGTTCCGCTaGTGGGCTCTGGGCCAGGATGTCTTTTATCTCATT | + |
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Preference number: 6 (lower is better) Translates to: LEENANVFQWFR*WALGQDVFYLI Trigger: AATGAGATAAAAGACATCCTGGCCCAGAGCCCAGCAGCGGAACCACTGAAAAACATTGGCATTCTCTTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CTGAATATCGGAGTTTTTGATAAACTCCAGCTGTTCTaGCAGCTCCTTCACGGTCTTGTCAAGGCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LNIGVFDKLQLF*QLLHGLVKALC Trigger: GCAGAGAGCCTTGACAAGACCGTGAAGGAGCTGGCAGAACAGCTGGAGTTTATCAAAAACTCCGATATTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | CAGTTGGATGGTCACGTTCTCCACACCATTTTCCGATaGCCACCAGATCTTAAGGCGGTTTGGAGCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: QLDGHVLHTIFR*PPDLKAVWSKC Trigger: ACATTTGCTCCAAACCGCCTTAAGATCTGGTGGCAATCGGAAAATGGTGTGGAGAACGTGACCATCCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | GCTTCTCTGCCTCAAGAGACATCTGGAAATACTTGGTaGTGCTATCCAAGGCGCCCTGAATATCGGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: ASLPQETSGNTW*CYPRRPEYRSF Trigger: AAAACTCCGATATTCAGGGCGCCTTGGATAGCATCACCAAGTATTTCCAGATGTCTCTTGAGGCAGAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | CACAAGGATTCCCACCAGGAATTGTTCCCAGAGGATTaGAAGCACATGATTTACAACCATACGGGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HKDSHQELFPED*KHMIYNHTGLQ Trigger: CTGAAGACCCGTATGGTTGTAAATCATGTGCTTGCAATCCTCTGGGAACAATTCCTGGTGGGAATCCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | AGCCATTACAATGTTCCTTCACCGTGCCCAGGTAATTaGAGACACACTTTCTACAGTCTTGCCGAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SHYNVPSPCPGN*RHTFYSLAEEH Trigger: ATGCTCTTCGGCAAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACGGTGAAGGAACATTGTAATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | AGTGGCAGTCAGAGCCATTACAATGTTCCTTCACCGTaGCCAGGTAATTGCAGACACACTTTCTACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SGSQSHYNVPSP*PGNCRHTFYSL Trigger: AAGACTGTAGAAAGTGTGTCTGCAATTACCTGGGCACGGTGAAGGAACATTGTAATGGCTCTGACTGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | ACTCGCTCCCGAATGTCTTCTGTTAGGTTCTGTAACTaGTGTGGCGTGCTAGGCATTTCCATTTTCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: TRSRMSSVRFCN*CGVLGISIFST Trigger: AGTACTGAAAATGGAAATGCCTAGCACGCCACAGCAGTTACAGAACCTAACAGAAGACATTCGGGAGCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | ACTACTTTTTCGATATATTCTGCCTCCCCAGAGTTCTaGGCAGCTTTACGCTTAAGCTCTTCCACGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TTFSIYSASPEF*AALRLSSSTFL Trigger: GAGGAACGTGGAAGAGCTTAAGCGTAAAGCTGCCCAGAACTCTGGGGAGGCAGAATATATCGAAAAAGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | AATGTCAGCTGCACTCTGCTGCAAAATAACCTCTACTaGAGAGAGGGTTTCAACTCGCTCCCGAATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NVSCTLLQNNLY*REGFNSLPNVF Trigger: GAAGACATTCGGGAGCGAGTTGAAACCCTCTCTCAAGTAGAGGTTATTTTGCAGCAGAGTGCAGCTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | GTCTGCAGTGACTTTAACATCTGTTGCACTTTTGCTTaGTCTCTTAGCTTCCTCAAGCAACAGCTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VCSDFNICCTFA*SLSFLKQQLSS Trigger: AGAGCTGAGCTGTTGCTTGAGGAAGCTAAGAGAGCAAGCAAAAGTGCAACAGATGTTAAAGTCACTGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | TTCACTTCTACCTGCGCCATCTTTTCTGTGACATCTTaGGTTAGTTTCTCTGCCTCCTCGAAGAGAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: FTSTCAIFSVTS*VSFSASSKRMP Trigger: TGGCATTCTCTTCGAGGAGGCAGAGAAACTAACCAAAGATGTCACAGAAAAGATGGCGCAGGTAGAAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 90 bp | GTCAGGAAGTTTCTGATCTGCTTGATGAGGTTCCGCAGGTCCTCGTaGCTCTTGTCCACTTTTTCTTTGGTAGCATTTGTTTTTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: VRKFLICLMRFRRSS*LLSTFSLVAFVFNR Trigger: CCTGTTAAAAACAAATGCTACCAAAGAAAAAGTGGACAAGAGCAACGAGGACCTGCGGAACCTCATCAAGCAGATCAGAAACTTCCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | GGATTTCATACTCCATGGAATACGGTATGTTGTCAATaGAAAACTCCAAATAAGCCCCTTCAGGCACCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GFHTPWNTVCCQ*KTPNKPLQAPG Trigger: TCCGGGTGCCTGAAGGGGCTTATTTGGAGTTTTTCATTGACAACATACCGTATTCCATGGAGTATGAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | AAACAGCGTAATAGTACTTCTCTCGGATTTCCATTCTaGAGTCCAAAAGGTTATCCCCCAAGGTGTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KQRNSTSLGFPF*SPKGYPPRCAV Trigger: AACTGCACACCTTGGGGGATAACCTTTTGGACTCCAGAATGGAAATCCGAGAGAAGTACTATTACGCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CAA 72 bp | ACCATGTCTGCAGTGACTTTAACATCTGTTGCACTTTaGCTTGCTCTCTTAGCTTCCTCAAGCAACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TMSAVTLTSVAL*LALLASSSNSS Trigger: TGAGCTGTTGCTTGAGGAAGCTAAGAGAGCAAGCAAAAGTGCAACAGATGTTAAAGTCACTGCAGACATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS TCA 72 bp | CAGTTAATTTCACTTCTACCTGCGCCATCTTTTCTGTaGCATCTTTGGTTAGTTTCTCTGCCTCCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QLISLLPAPSFL*HLWLVSLPPRR Trigger: TCTTCGAGGAGGCAGAGAAACTAACCAAAGATGTCACAGAAAAGATGGCGCAGGTAGAAGTGAAATTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | TCCATTCTGGAGTCCAAAAGGTTATCCCCCAAGGTGTaGAGTTTCACAAACTTGATTCTCAAGTTGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: SILESKRLSPKV*SFTNLILKLVI Trigger: AATCACCAACTTGAGAATCAAGTTTGTGAAACTGCACACCTTGGGGGATAACCTTTTGGACTCCAGAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS GCA 72 bp | TTCCTTCACCATGTCTGCAGTGACTTTAACATCTGTTaGACTTTTGCTTGCTCTCTTAGCTTCCTCAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FLHHVCSDFNIC*TFACSLSFLKQ Trigger: TTGCTTGAGGAAGCTAAGAGAGCAAGCAAAAGTGCAACAGATGTTAAAGTCACTGCAGACATGGTGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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| CDS CCA 72 bp | TCAGATTCAATCGATGTTAGCAGGTTTTGGGTTCCTTaGATATCCTCATCAGCTTGTTTAATCGCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SDSIDVSRFWVP*ISSSACLIAFS Trigger: AGAGAAGGCGATTAAACAAGCTGATGAGGATATCCAAGGAACCCAAAACCTGCTAACATCGATTGAATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002979.16 ENSMUST00000169088.8 ENSMUST00000239496.2 |
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