RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMA5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000015647

Ensembl transcript IDs: ENSMUST00000015791.6

Found 689 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGCCACGGGACAGGGGTaGGCTCTGCCACCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTATGQG*ALPPAL
Trigger: GAGCGCTGGTGGCAGAGCCCACCCCTGTCCCGTGGC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCGCCAGCGGTGGGTGTaGGGGGCTGAGCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTRQRWV*GAELLC
Trigger: ACAGAGCAGCTCAGCCCCTCACACCCACCGCTGGCG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGCCTGCAGACGGCCCTaGGCAAGGCCCAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYACRRP*ARPSLP
Trigger: GGGGAGGCTGGGCCTTGCTCAGGGCCGTCTGCAGGC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGCCAGTTCGGCCTCTaGCACTGCCCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGQFGL*HCPLGP
Trigger: GGGGCCCAGGGGGCAGTGGCAGAGGCCGAACTGGCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACCCCGGCAGGGACACTaGCCCCCGAAGGGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKPRQGH*PPKGSH
Trigger: GTGCGAGCCCTTCGGGGGCCAGTGTCCCTGCCGGGG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATGGCGACTCTGGACCTaGAGCCGGGGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIWRLWT*SRGPGP
Trigger: GGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCGCCCTCCGCCAGGTTaGAGTAGGGCGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYRPPPG*SRAGAG
Trigger: GCCTGCACCCGCCCTACTTCAACCTGGCGGAGGGCG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGTGTGTCCCTGCCCATaGTCACTGCCACTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTVCPCP*SLPLGA
Trigger: GGCACCGAGTGGCAGTGATCATGGGCAGGGACACAC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCATCGCCCCCGGGAGTaGGCGCCTCGCCTACCAGCG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYHRPRE*APRLPA
Trigger: CGCTGGTAGGCGAGGCGCGCACTCCCGGGGGCGATG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATTCGGCCTCTGCCACTaGCCCCTGGGCCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIFGLCH*PLGPQV
Trigger: GACCTGGGGGCCCAGGGGGCAGTGGCAGAGGCCGAA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGAGCCACCGGCCTTCTaGCACACGCACAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTEPPAF*HTHSHG
Trigger: ACCGTGACTGTGCGTGTGCCAGAAGGCCGGTGGCTC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCACAGGGCCTGCAGTTaGGGAAACCCCAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTHRACS*GNPSSR
Trigger: CCGGCTACTGGGGTTTCCCCAACTGCAGGCCCTGTG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGGTCCGTCAGCTCCTaGACGCCGGGCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGSVSS*TPGPEQ
Trigger: CTGCTCAGGGCCCGGCGTCCAGGAGCTGACGGACCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATCTGCCACTGCCCCCTaGGCCCCCAGGTCACGCGTC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINISATAP*APRSRV
Trigger: GACGCGTGACCTGGGGGCCCAGGGGGCAGTGGCAGA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCACATCTGCGTGGCCATaGCAGACACAGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTTSAWP*QTQRPP
Trigger: TGGTGGGCGCTGTGTCTGTCATGGCCACGCAGATGT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCGTGGGTGGCCGTACTaGGGGCTTCGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPRGWPY*GLRQPQ
Trigger: CTGTGGCTGCCGAAGCCCTCAGTACGGCCACCCACG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGACAGGGGTGGGCTCTaGCACCAGCGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQDRGGL*HQRSVP
Trigger: TGGCACGGAGCGCTGGTGGCAGAGCCCACCCCTGTC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGAGGCATTCAGCCTGTaGAGCCTGGCCCAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPEAFSL*SLAQAA
Trigger: CGCGGCCTGGGCCAGGCTGCACAGGCTGAATGCCTC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGCTGGCCTGCCTCAGTaGCTGGCCTGCCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICAGLPQ*LACRIL
Trigger: GAGGATGCGGCAGGCCAGGCACTGAGGCAGGCCAGC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCGGACGGACACCCTGTaGCACTGGCCAGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICRTDTL*HWPARE
Trigger: CTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGCCACATGGAACACCTaGCCCAGGTCCAGTGTGACG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTATWNT*PRSSVT
Trigger: CGTCACACTGGACCTGGGCCAGGTGTTCCATGTGGC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAACGGCACCCACCTCGTaGCAGCCACAAGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKTAPTS*QPQGRA
Trigger: GGCCCTCCCTTGTGGCTGCCACGAGGTGGGTGCCGT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCATGGTGCCTGCCTCATaGCAGTCACAGGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTMVPAS*QSQGRQ
Trigger: CTGTCGCCCCTGTGACTGCCATGAGGCAGGCACCAT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGCAGTGGCCCGTGTGTaGGTCACAGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIAVARV*VTVASG
Trigger: CCCCGAGGCCACTGTGACCCACACACGGGCCACTGC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGCCTGCCTCAGTGCCTaGCCTGCCGCATCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPACLSA*PAASSA
Trigger: TGCCGAGGATGCGGCAGGCCAGGCACTGAGGCAGGC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCCACAGGTACCAGGGTaGCGCTGTGCAGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTPQVPG*RCAGRS
Trigger: ACTTCTTCCTGCACAGCGTCACCCTGGTACCTGTGG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCTGCAGTCGCAGGGCTaGCAGGAGCTGCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICLQSQG*QELPST
Trigger: GGTGCTAGGCAGCTCCTGTCAGCCCTGCGACTGCAG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGTGGGGCCCAGTGGTGTaGCGGAGGCAGCCTCGACAG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMWGPVV*RRQPRQ
Trigger: CTGTCGAGGCTGCCTCCGTCACACCACTGGGCCCCA...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTAGTAGCTGGCCTGCCTaGCCTTGGACCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPSSWPA*PWTPVA
Trigger: GGCCACAGGGGTCCAAGGTCAGGCAGGCCAGCTACT...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCCTGGTTGCGGCTGTTaGGTTCCTCAGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYPGCGC*VPQPPG
Trigger: CCCGGGAGGCTGAGGAACTCAACAGCCGCAACCAGG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGGCCCAGGTGGAAGATaGGGCCAGCAGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIGPGGR*GQQLPR
Trigger: CCTTGGCAGCTGCTGGCCTCATCTTCCACCTGGGCC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGACACTGGCAGCGCCTaGAGCCCTTCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICDTGSA*SPSLGG
Trigger: GCCTCCCAGAGAAGGGCTGCAGGCGCTGCCAGTGTC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCCCCTGTGGCCTGACTaGCCAGCCTCTCCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPPLWPD*PASPCP
Trigger: AGGACACGGAGAGGCTGGGCAGTCAGGCCACAGGGG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCCTCAGTGCCTGGCCTaGCGCATCCTCGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMPQCLA*RILGSL
Trigger: CAGGCTGCCGAGGATGCGGCAGGCCAGGCACTGAGG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCATGTGCGGCTGGCCTaGCTCAGTGCCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYHVRLA*LSAWPA
Trigger: GGCAGGCCAGGCACTGAGGCAGGCCAGCCGCACATG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACTCAGGTCCTGGCCTTaGAGGCCTCCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKLRSWP*RPPSWL
Trigger: GAGCCAGCTGGGAGGCCTGCAAGGCCAGGACCTGAG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCTGCGGGCAAAGCCACTaGCATCCAGGTAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTCGQSH*HPGRSH
Trigger: ATGGCTCCTACCTGGATGGCAGTGGCTTTGCCCGCA...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCACCAGGGTGCCTTCCTaGACTGCCAGGCACAAGAAC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTTRVPS*TARHKN
Trigger: GTTCTTGTGCCTGGCAGTGCAGGAAGGCACCCTGGT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGGCTTCCACGGCTGCTaGTTGAAGCCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTGFHGC*LKPGQH
Trigger: ATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGGCAGGGGATGCAGCTaGGGAAGCCGTAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKGRGCS*GSRRSR
Trigger: CCGGCTTCTACGGCTTCCCCAGCTGCATCCCCTGCC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCCATCGGCAGAGCAGTaGCAGGGGATGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICPSAEQ*QGMQLG
Trigger: CCCCAGCTGCATCCCCTGCCACTGCTCTGCCGATGG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCCCAGGGTGGGCACCTaGGTGGTGAAGACCACCGTG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPPRVGT*VVKTTV
Trigger: CACGGTGGTCTTCACCACCCAGGTGCCCACCCTGGG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGGAGCCCTTGGCAGCTaGTCCACAGGCACAAGGGCG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKGALGS*STGTRA
Trigger: CGCCCTTGTGCCTGTGGACCAGCTGCCAAGGGCTCC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGCACTCGGAGCCCTTaGCAGCTGGTCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGTRSP*QLVHRH
Trigger: GTGCCTGTGGACCAGCTGCCAAGGGCTCCGAGTGCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGGCACTGGGGTCCTGTaGTCCCTGGCTGGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYGTGVL*SLAGSD
Trigger: GTCACTGCCAGCCAGGGACCACAGGACCCCAGTGCC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCCTGCAGCCCTTCTCTaGGAGGCCCCAGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICPAALL*EAPVAR
Trigger: CCTGGCTACTGGGGCCTCCCAGAGAAGGGCTGCAGG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGGGGGACAGGTGCAGTaGCCCGTGTGTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQGGQVQ*PVCGSQ
Trigger: CTGTGACCCACACACGGGCCACTGCACCTGTCCCCC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGAGAGCAGGAGGCCCTaGGAAGCCGCATGTGGACGG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICESRRP*EAACGR
Trigger: CCGTCCACATGCGGCTTCCCAGGGCCTCCTGCTCTC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCCGTCCACCACAAGCTaGATCTGCTGCATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTPSTTS*ICCIPQ
Trigger: CTGGGGAATGCAGCAGATCCAGCTTGTGGTGGACGG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGGAGTGGCCAGGGCCTaGCCCAGGTGGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPGVARA*PRWKMR
Trigger: CCTCATCTTCCACCTGGGCCAGGCCCTGGCCACTCC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGCTGCATGTAGGGAGTaGCCAGGGCCTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKAACRE*PGPGPG
Trigger: ACCTGGGCCAGGCCCTGGCCACTCCCTACATGCAGC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGTAGCGGGGAGACACTaGGCTTGGCCTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIVAGRH*AWPASG
Trigger: CCCAGAGGCAGGCCAAGCCCAGTGTCTCCCCGCTAC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCTTGGCCCTTCCACGTaGGCCCGGCACATACAGGGA +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPLGPST*ARHIQG
Trigger: TCCCTGTATGTGCCGGGCTCACGTGGAAGGGCCAAG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATGTGGAGTGCAGGGCTaGGGGACGGTAGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINICGVQG*GTVGTG
Trigger: GCCTGTACCTACCGTCCCTCAGCCCTGCACTCCACA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCTGTGCAGGAAGAAGTaGGCTTGCTCAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTLCRKK*ACSAVS
Trigger: GCTCACAGCTGAGCAAGCTCACTTCTTCCTGCACAG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGTGTAGCTGTCCTCGGTaGACCTGGCCAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMCSCPR*TWPGGG
Trigger: CCCTCCGCCTGGCCAGGTTCACCGAGGACAGCTACA...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACCGCGGAGCTGGCATTaGTACCCTGCAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIPRSWH*YPAAAH
Trigger: GTGAGCAGCTGCAGGGTATCAATGCCAGCTCCGCGG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATCTTCCAGGGGGCCTaGGACACAGGGTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIIFQGA*DTGCDP
Trigger: GGGGTCACACCCTGTGTCTCAGGCCCCCTGGAAGAT...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGCGGGCTTCCACGGCTaGTGGTTGAAGCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIAGFHG*WLKPGQ
Trigger: CTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACCTTCCGGCAGGCATTaGCCTGGGTCCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIPSGRH*PGSLQH
Trigger: ATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAAAGAGAGCACGGATCTaGAGCTGCTCCAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIKRARI*SCSRPA
Trigger: GGCCGGCCTGGAGCAGCTGCAGATCCGTGCTCTCTT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCAGCATAGCCTGGCCTaGAGAGGCACTGGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICQHSLA*RGTGFG
Trigger: GCCGAACCCAGTGCCTCTGCAGGCCAGGCTATGCTG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGGGCTGACAGGAGCTaGCTAGCACCAGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYRADRS*LAPGGS
Trigger: GGAACCCCCTGGTGCTAGGCAGCTCCTGTCAGCCCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCCTGGTGCTGCTGGCTaGAGGTGTCACAGCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQPGAAG*RCHSVP
Trigger: GGGAACGCTGTGACACCTGCAGCCAGCAGCACCAGG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACCACCATCTCCCATGTaGGGCTGGCCTGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKPPSPM*GWPASV
Trigger: CACTGAGGCAGGCCAGCCGCACATGGGAGATGGTGG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTGGCTACCCCAGGGCTaGAACACTGGCATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYWLPQG*NTGMGG
Trigger: GCCACCCATGCCAGTGTTCCAGCCCTGGGGTAGCCA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGGCAAGGTCCCTGCTaGGCTGCAGCCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQRQGPC*AAATQL
Trigger: CAGCTGTGTGGCTGCAGCCCAGCAGGGACCTTGCCT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACAGGAAGGGCAGGATTaGCTGGGGCCAGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIQEGQD*LGPDQQ
Trigger: CTGCTGGTCTGGCCCCAGCCAATCCTGCCCTTCCTG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAACCCAGGGTGCCTCGTaGGTCACAGCTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIITQGAS*VTAAAC
Trigger: ACACGCTGCAGCTGTGACCCACGAGGCACCCTGGGT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCAAGACAGTTCTCTGTaGAGTGCAGGGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTQDSSL*SAGLRD
Trigger: GTCCCTCAGCCCTGCACTCCACAGAGAACTGTCTTG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGATGATGGGCTGCGGTaGCTTCGGGAATCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKDDGLR*LRESGG
Trigger: GCCTCCCGATTCCCGAAGCCACCGCAGCCCATCATC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATCACGGCCAATAACGTaGCCCCGGCAGGGACACTGG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINISRPIT*PRQGHW
Trigger: CCAGTGTCCCTGCCGGGGCCACGTTATTGGCCGTGA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGTGTGTGGGTCACAGTaGCCTCGGGGACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIVCGSQ*PRGHWQ
Trigger: CTGCCAGTGTCCCCGAGGCCACTGTGACCCACACAC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGACCTTGGACCCCTGTaGCCTGACTGCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQDLGPL*PDCPAS
Trigger: AGAGGCTGGGCAGTCAGGCCACAGGGGTCCAAGGTC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCTAGACGGCTCAGTTTaGCCAGCAGCTGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTLDGSV*PAAVAM
Trigger: CATTGCCACAGCTGCTGGCCAAACTGAGCCGTCTAG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCCATGTAGTCCCCAGTaGCCTGGCGGCTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICPCSPQ*PGGCPC
Trigger: ACATGGGCAGCCGCCAGGCCACTGGGGACTACATGG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTTTGTGGGGGCTGCAGTaGGTCGGCCTTCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPLWGLQ*VGLLQA
Trigger: GGCCTGAAGAAGGCCGACCCACTGCAGCCCCCACAA...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGGGAGACACTGGGCTTaGCCTGCCTCTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPGRHWA*PASGSV
Trigger: CACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTCCC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAAATAATACCTGCGGGTaGCTGTGGGGTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIINNTCG*LWGPAA
Trigger: CGCTGCGGGACCCCACAGTCACCCGCAGGTATTATT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATCCACGGCTGCTGGTTaGAGCCTGGACAGCATCGGT +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKSTAAG*SLDSIG
Trigger: ACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACCGACAGACATGAGGTaGGTCGAGAGGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKPTDMR*VERLVR
Trigger: CCTGACCAGCCTCTCGACTCACCTCATGTCTGTCGG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCCCTCTGGGGCACAGTaGCAAAGGCAGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMPSGAQ*QRQAQC
Trigger: GCACTGAGCCTGCCTTTGTCACTGTGCCCCAGAGGG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACGGCCAGCACCATCATaGGTTCTTCTCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRPAPS*VLLGTR
Trigger: CCGTGTCCCGAGAAGAACTCATGATGGTGCTGGCCG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACGTCAGGATGCAGGTTaGGTAGTCCCTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIRQDAG*VVPRSQ
Trigger: CTGGGAGCGAGGGACTACTCAACCTGCATCCTGACG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGGTAGGAGCCATCTGTaGGCCATGGGTCACCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYGRSHL*AMGHRW
Trigger: CCACCGGTGACCCATGGCTCACAGATGGCTCCTACC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGGAAGCCGTGGCCGTaGAAAGTCATGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQRKPWP*KVMVRP
Trigger: GGGACGCACCATGACTTTTCACGGCCACGGCTTCCT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGCCACCAGCGCTCCGTaGCATCGATGGCGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYATSAP*HRWRCS
Trigger: TGAGCAACGCCATCGATGGCACGGAGCGCTGGTGGC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTAGGTCCCTGCTGGGCTaGAGCCACACAGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPRSLLG*SHTADR
Trigger: TCTGTCAGCTGTGTGGCTGCAGCCCAGCAGGGACCT...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGCAGTGGCAGGGGATaGAGCTGGGGAAGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSSGRG*SWGSRR
Trigger: TCTACGGCTTCCCCAGCTGCATCCCCTGCCACTGCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGCTGGCTCTGCTCTGTaGAGTTGGTACAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTAGSAL*SWYSWK
Trigger: TTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACCAGCAAGGCCCAGATaGCGGGGTTCAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKPARPR*RGSAQR
Trigger: CCTTTGTGCTGAACCCCGGCATCTGGGCCTTGCTGG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCCACCTGCCGGTCACTaGTCAACAGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMPPAGH*STAPSP
Trigger: AGGGCTGGGTGCTGTTGAGCAGTGACCGGCAGGTGG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCACACTGGAAGAGGTCTaGGAGAAGAGAGCACGGATC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTTLEEV*EKRARI
Trigger: GATCCGTGCTCTCTTCTCGCAGACCTCTTCCAGTGT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGGCAGCCCACACAAATaGCAGAGCCAGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYGSPHK*QSQEGS
Trigger: GCTGCCTTCCTGGCTCTGGCATTTGTGTGGGCTGCC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCTGGCAACAAAGCATTaGCATAGAAGCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTLATKH*HRSLGH
Trigger: GTGCCCCAGGCTTCTATGGCAATGCTTTGTTGCCAG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTACAGGCACCTGGTGCTaGTGGCTGCAGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICTGTWC*WLQVSQ
Trigger: CTGTGACACCTGCAGCCAGCAGCACCAGGTGCCTGT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGGTACAGGCACCTGGTaGTGCTGGCTGCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYGTGTW*CWLQVS
Trigger: TGACACCTGCAGCCAGCAGCACCAGGTGCCTGTACC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGAAGAGCACCAGGGTaGCTTCCTGCACTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYRRAPG*LPALPG
Trigger: GCCTGGCAGTGCAGGAAGGCACCCTGGTGCTCTTCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGTGACCCCCACCATTTaGGTTGGGGTCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIVTPTI*VGVLSG
Trigger: GCCACTGAGGACCCCAACGCAAATGGTGGGGGTCAC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGCAGGCTCCCGAGGTaGAGAAGTGCTGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGRLPR*RSAGEP
Trigger: TGGTTCTCCAGCACTTCTGCACCTCGGGAGCCTGCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTGGCAGCTAGGCCCGTaGAATCCAGGAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICWQLGP*NPGAQS
Trigger: GCTCTGTGCTCCTGGATTCCACGGGCCTAGCTGCCA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAAGGGCAGGATTGGCTaGGGCCAGACCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYKGRIG*GQTSRM
Trigger: CATCCTGCTGGTCTGGCCCCAGCCAATCCTGCCCTT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACTACAGGTGGGTCCTTaGGTGTTAGGGCGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKLQVGP*VLGRHL
Trigger: CAGGTGCCGCCCTAACACCCAAGGACCCACCTGTAG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGGTGGGAAAGCCACTaGCTGGCTCTGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGWESH*LALLCA
Trigger: TGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGGCTCAGTGCTGGGTaGGAAAGCCACTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRLSAG*ESHWLA
Trigger: AGCCAGCCAGTGGCTTTCCCACCCAGCACTGAGCCT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGGCAGGCTCAGTGCTaGGTGGGAAAGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYRQAQC*VGKPLA
Trigger: AGCCAGTGGCTTTCCCACCCAGCACTGAGCCTGCCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGACAAAAGCTGGCGTTaGCGTGGCCCTGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICDKSWR*RGPARC
Trigger: GCATCTGGCAGGGCCACGCCAACGCCAGCTTTTGTC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACATGAGGACAAAAGCTaGCGTTGGCGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIHEDKS*RWRGPA
Trigger: GGCAGGGCCACGCCAACGCCAGCTTTTGTCCTCATG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAAACCCCAGTAGCCGGTaGCACAGCGGGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSININPSSR*HSGNSH
Trigger: GTGACTGTTCCCGCTGTGCCACCGGCTACTGGGGTT...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGTCCCCACGCGACACTaGTCACATCTTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPVPTRH*SHLEPC
Trigger: GCAGGGCTCAAGATGTGACCAGTGTCGCGTGGGGAC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATTCAGGCCGATGCTCGTaGGGTACCACCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYSGRCS*GTTCRS
Trigger: TGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGA...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATTCCACATTGCTGGCTaGAGGCCCCCTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKFHIAG*RPPTSL
Trigger: GAGGCTGGTAGGGGGCCTCCAGCCAGCAATGTGGAA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCGTCTGCAAAATTATTaGAGGGCACTGCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTRLQNY*RALPRG
Trigger: GCCCCTTGGCAGTGCCCTCCAATAATTTTGCAGACG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGGCACCAGCATAGCCTaGCCTGCAGAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYGTSIA*PAEALG
Trigger: ACCCAGTGCCTCTGCAGGCCAGGCTATGCTGGTGCC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGGCACCTGGTGCTGCTaGCTGCAGGTGTCACAGCGT +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMGTWCC*LQVSQR
Trigger: ACGCTGTGACACCTGCAGCCAGCAGCACCAGGTGCC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCTCTGCAGGTCAGCAATaGAGGCATTCAGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTSAGQQ*RHSACA
Trigger: TGCACAGGCTGAATGCCTCCATTGCTGACCTGCAGA...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGTGCCCGGCCCAGTGTaGACTCTGTGGTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIVPGPV*TLWCPV
Trigger: TACTGGACACCACAGAGTCCACACTGGGCCGGGCAC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCTGGTCAGCTGCTCCTaGACACGAGCCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPLVSCS*TRAISL
Trigger: GAGGCTGATGGCTCGTGTCCAGGAGCAGCTGACCAG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATAGGCCCAGCCTCCCCTaGTGTCCAAGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYRPSLP*CPRMVS
Trigger: GGAGACCATCCTTGGACACCAGGGGAGGCTGGGCCT...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGCCATCTGTGAGCCATaGGTCACCGGTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICAICEP*VTGGLG
Trigger: TCCAAGGCCACCGGTGACCCATGGCTCACAGATGGC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCGCCAATAGAAACACTTaGATCGCCTTGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTANRNT*IALLAA
Trigger: GGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGC...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTTCTGGCTCCAGGTCTaGCTGCCGTCCACCACAAGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICFWLQV*LPSTTS
Trigger: GCTTGTGGTGGACGGCAGCCAGACCTGGAGCCAGAA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCAGACACAGGGAGCTTaGAACTGTAACTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTQTQGA*NCNCWQ
Trigger: CTGCCAGCAGTTACAGTTCCAAGCTCCCTGTGTCTG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGGCTTGGCCTGCCTCTaGGTCAGTGCCTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYGLACL*VSAFPC
Trigger: GCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGTCTTGCCACACACGTaGGCCTTGCAGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKVLPHT*ALQKHC
Trigger: GCAGTGCTTCTGCAAGGCTCACGTGTGTGGCAAGAC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCTCAGTTCCAGCTGCTaGAGGGAAGCCATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMLSSSC*REAIQG
Trigger: CCCCTGGATGGCTTCCCTTCAGCAGCTGGAACTGAG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCCGGCAGAATGGAGATaGGCTGCTGGGGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYPAEWR*AAGANV
Trigger: CACATTAGCCCCAGCAGCTCATCTCCATTCTGCCGG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAACCTCGCTGGGTCTCTaGGTGCAGCTCATAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINITSLGL*VQLIVE
Trigger: CTCCACTATGAGCTGCACTCAGAGACCCAGCGAGGT...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGAATGGCCATGGCACTaGCAGGGGACACATCGGCCT +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMEWPWH*QGTHRP
Trigger: AGGCCGATGTGTCCCCTGTCAGTGCCATGGCCATTC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGGGGTCGCAGTCACTaGAGATCATGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGGRSH*RSCWGL
Trigger: GAGACCCCAACATGATCTTCAGTGACTGCGACCCCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTATCCTGGTCTACGCTaGACACAGTGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYYPGLR*TQWPAP
Trigger: TGGAGCGGGCCACTGTGTTCAGCGTAGACCAGGATA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCAATAGACCACTTCGGTaGTGGGTGCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTNRPLR*WVPHQE
Trigger: TTCCTGATGTGGCACCCATCACCGAAGTGGTCTATT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGCCATCCTTGCAGGCTaGACAGGTCTTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIAILAG*TGLATH
Trigger: GTGTGTGGCAAGACCTGTGCAGCCTGCAAGGATGGC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGCCACTGGCTGGCTCTaGTCTGTGCAGTTGGTACAG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICATGWL*SVQLVQ
Trigger: CTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGCTAGCCATGGTGCCTaGCTCATGGCAGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYASHGA*LMAVTG
Trigger: CCCTGTGACTGCCATGAGGCAGGCACCATGGCTAGC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCAGTCACGCCTGCTTTaGACAGGCAGCGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYQSRLL*TGSVHS
Trigger: AGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCCTCCCAGCTGGCTCTaGCACCTCTCCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQPPSWL*HLSTFF
Trigger: GAAGAATGTGGAGAGGTGGCAGAGCCAGCTGGGAGG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCCCTGCCCCATCATTTaGCTGCAGCAGGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPPCPII*LQQDLF
Trigger: GAACAGGTCCTGCTGCAGGCAAATGATGGGGCAGGG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATCCGCGCATCCCCACTaGCCCCTGGATTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINISAHPH*PLDLYR
Trigger: TCTGTACAAATCCAGGGGGCAGTGGGGATGCGCGGA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGCTCCGTGCCATCGATaGCGTTGCTCACAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMAPCHR*RCSQGV
Trigger: CACACCCTGTGAGCAACGCCATCGATGGCACGGAGC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTTGTGACCGAAGTCTGTaGACCGCTCCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPCDRSL*TAPAPR
Trigger: TCTGGGTGCTGGAGCGGTCCACAGACTTCGGTCACA...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGCCTTGCCCATGAGGTaGCCCAGTAGCGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKALPMR*PSSVLV
Trigger: AACCAACACGCTACTGGGCCACCTCATGGGCAAGGC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGACACCGTCCCAACCTTaGGTCCTTCCGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQTPSQP*VLPAGI
Trigger: AATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGCACAGAGCTCACAGTaGGCACCCCGGAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMAQSSQ*APRKLG
Trigger: ACCCAACTTCCGGGGTGCCCACTGTGAGCTCTGTGC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGGTCACAGAGGCTGTTaGCTACCCCAGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYGHRGC*LPQGWN
Trigger: GTTCCAGCCCTGGGGTAGCCAACAGCCTCTGTGACC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATACAGCGATCACAGCTTaGCCCTTCCACGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYTAITA*PFHVSP
Trigger: CGGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGT...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGGGAAAGCCACTGGCTaGCTCTGCTCTGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYGKATG*LCSVQL
Trigger: CAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGGTGGACAGATACACTaGCCCGTGAGCTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQGGQIH*PVSSSH
Trigger: GTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGGGAACAGTGCGTGGTaGACAGATACACTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYGNSAW*TDTLAR
Trigger: ACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCAGCCCACCAAGGGGTaGCAACCAAAGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMQPTKG*QPKLCG
Trigger: GCCACAGAGCTTTGGTTGCCACCCCTTGGTGGGCTG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCTACGCAAGGAGACACTaGAAGAGGTCTGCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTYARRH*KRSARR
Trigger: TCTTCTCGCAGACCTCTTCCAGTGTCTCCTTGCGTA...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGGGCAGCTCACACATaGGGATGCAGGGTTACTGGG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQRAAHT*GCRVTG
Trigger: CCCAGTAACCCTGCATCCCCATGTGTGAGCTGCCCT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTAGTCCACCTTGCTGCTaGCAGGGGAAAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICSPPCC*QGKRPA
Trigger: TGCAGGCCTTTTCCCCTGCCAGCAGCAAGGTGGACT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAACGGCAGCCACAGCCTTaGCGTGAGCAATCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRQPQP*REQSSH
Trigger: GTGAGAAGATTGCTCACGCCAAGGCTGTGGCTGCCG...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGCTGGCACTGGGCTCTaGATGTGGAACTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIAGTGL*MWNLRA
Trigger: TGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATTCGGGCGCTGGCACTaGGCTCTGGATGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIFGRWH*ALDVEL
Trigger: AAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGAGGTCAGGCCGAGGTaGGTTGGCAAACTTGATGAG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPEVRPR*VGKLDE
Trigger: CTCATCAAGTTTGCCAACTCACCTCGGCCTGACCTC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATTTGGTTCACAGCCTTaGCCCAGGGCACCACCAACA +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIFGSQP*PRAPPT
Trigger: TGTTGGTGGTGCCCTGGGTCAAGGCTGTGAACCAAA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACATCCAGCATCGTCTaGCCCTCACACAACACCAGG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYTSSIV*PSHNTR
Trigger: CCTGGTGTTGTGTGAGGGTCAGACGATGCTGGATGT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGGAAGGCAGCGATCTaGATGGCCATGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRKAAI*MAMALT
Trigger: TGTCAGTGCCATGGCCATTCAGATCGCTGCCTTCCT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGCCAGGCTGGCATTGTaGACTCCACGGTTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICARLAL*TPRFSR
Trigger: TCTAGAGAACCGTGGAGTTCACAATGCCAGCCTGGC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGACCCAGTGCACCTTCTaGTTACGCAGAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQTQCTF*LRRDTP
Trigger: GGGAGTGTCTCTGCGTAATCAGAAGGTGCACTGGGT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGAGGCTGCACAGGTCTTaGCACACACGTGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMRLHRS*HTREPC
Trigger: GCAAGGCTCACGTGTGTGGCAAGACCTGTGCAGCCT...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAATTATTGGAGGGCACTaGCAAGGGGCAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIIIGGH*QGARAA
Trigger: AGCTGCCCTTGCCCCTTGGCAGTGCCCTCCAATAAT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCACACCGGGTGCAGTTaGCTGGCAACAAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICHTGCS*LATKHC
Trigger: GCAATGCTTTGTTGCCAGGCAACTGCACCCGGTGTG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCTGGCATTGATACCCTaGAGCTGCTCACGGATAGCG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICLALIP*SCSRIA
Trigger: CGCTATCCGTGAGCAGCTGCAGGGTATCAATGCCAG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACTACCAAGTCCACCTTaGTGCTGGCAGGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIILPSPP*CWQGKR
Trigger: CCTTTTCCCCTGCCAGCAGCAAGGTGGACTTGGTAG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCGTGGAAAACTCCCCTaGCCCATCATTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPRGKLP*PIICLQ
Trigger: CTGCAGGCAAATGATGGGGCAGGGGAGTTTTCCACG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGCCTGTGGTGTGGTTaGTCTGTGTGTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGLWCG*SVCLPP
Trigger: TGGAGGTAGACACACAGAGCAACCACACCACAGGCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCTGCCTCTGGGTCAGTaGCTTTCCCTGCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYLPLGQ*LSLLGK
Trigger: CTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCCACATGTATTGTGCTaGCAGGCACACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQPHVLC*QAHCSL
Trigger: CAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGCAGGCACCTGTCTTTaGTTCACAGCCTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICAGTCL*FTALTQ
Trigger: CTGGGTCAAGGCTGTGAACCAAAGACAGGTGCCTGC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCATGTGGTGCAGGTCTaGCAAGTAGTGGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICHVVQV*QVVVLR
Trigger: GCGAAGGACCACTACTTGCCAGACCTGCACCACATG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGAGGTCACGTTCAGCCTaGCCACAATCCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMRSRSA*PQSWAG
Trigger: TCCAGCCCAGGATTGTGGCCAGGCTGAACGTGACCT...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGGCAGGCTGTTGTCATaGCGACACAGGGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMGRLLS*RHRASV
Trigger: AACTGAGGCCCTGTGTCGCCATGACAACAGCCTGCC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGAGAGACAAGGAGGTaGCGGCATTCCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYRETRR*RHSGRM
Trigger: CATTCTGCCGGAATGCCGCCACCTCCTTGTCTCTCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGCAACCAAAGCTCTGTaGCTGGCAGACCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIATKAL*LADQAV
Trigger: GACTGCTTGGTCTGCCAGCCACAGAGCTTTGGTTGC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTCCTTGCAATGGCATTaGCCTGTGAGGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSLQWH*PVRGSH
Trigger: GTGTGACCCCCTCACAGGCCAATGCCATTGCAAGGA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTACGTTCTCCTTGCAATaGCATTGGCCTGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICTFSLQ*HWPVRG
Trigger: CCCCCTCACAGGCCAATGCCATTGCAAGGAGAACGT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGGTTTCTGTCCCACATaGGGAACAGTCACACCGGGT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIGFCPT*GTVTPG
Trigger: ACCCGGTGTGACTGTTCCCCATGTGGGACAGAAACC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGGCAGCGTCCACTCTaGGGATCACAGGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRQRPL*GSQVSV
Trigger: GACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCAGGAGAACCACACAGTaGTCACACACTTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTRRTTQ*SHTSQC
Trigger: ACACTGTGAAGTGTGTGACCACTGTGTGGTTCTCCT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTCCTTCAGCCGTTCCTaGTTGCGGCTGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSFSRS*LRLLSS
Trigger: GGAACTCAACAGCCGCAACCAGGAACGGCTGAAGGA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTGCTGCTGTAGGCATTaGAGGCTTCCACAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICCCCRH*RLPQPS
Trigger: AGAGGGCTGTGGAAGCCTCCAATGCCTACAGCAGCA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCATGTCTTCTCCAGGGTaGACACTGAACTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTMSSPG*TLNCLH
Trigger: ATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACAT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGCACACGACCAATGTTaGCAGACAAAGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKAHDQC*QTKPGW
Trigger: CCAGCCTGGCTTTGTCTGCCAACATTGGTCGTGTGC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGACATGTGGCCAAACTaGAGGGTCCTGTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKDMWPN*RVLSML
Trigger: CAGCATCGACAGGACCCTCCAGTTTGGCCACATGTC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACGGTGACAGACATGTaGCCAAACTGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYTVTDM*PNWRVL
Trigger: CAGGACCCTCCAGTTTGGCCACATGTCTGTCACCGT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGTCAAACACACGCTGTaGTCCCCGAAGTCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICVKHTL*SPKSLY
Trigger: GTACAGCGACTTCGGGGACCACAGCGTGTGTTTGAC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGTGGACGGACAAGCATaGAGAGGTGGAGCCTATTCC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKVDGQA*RGGAYS
Trigger: GGAATAGGCTCCACCTCTCCATGCTTGTCCGTCCAC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACTGGCAAACGGCCTGTaGTGTGGTTGCTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINILANGL*CGCSVC
Trigger: ACACACAGAGCAACCACACCACAGGCCGTTTGCCAG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACCAGCCAAGCTCTCTaGCAAACGGCCTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMTSQAL*QTACGV
Trigger: CACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGT...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGAGCAGTTGAAGACTTaGGCAGGCTCCCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMEQLKT*AGSRGA
Trigger: TGCACCTCGGGAGCCTGCCCAAGTCTTCAACTGCTC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGTCATTGTGGGGAAATaGAGGCAGAGGGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIVIVGK*RQRVAV
Trigger: CACTGCTACCCTCTGCCTTCATTTCCCCACAATGAC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACTGCCAGTACAGCTCTaGGAAAGTGTCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINILPVQL*ESVSHR
Trigger: TCTGTGGCTGACACTTTCTCAGAGCTGTACTGGCAG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGTACTGGGATCACTGCTaGCAAAGCCAGGCCTACAGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMYWDHC*QSQAYS
Trigger: GCTGTAGGCCTGGCTTTGTCAGCAGTGATCCCAGTA...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTCTGGATGTGGAACTTaGGGGCAGTGTACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSGCGT*GQCTQQ
Trigger: TTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCAGGGTGTGCCTTGTTaGTGTTGGCAGCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQQGVPC*CWQLYR
Trigger: TCTGTACAGCTGCCAACAGCAACAAGGCACACCCTG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGTTGCTCACAGGGTGTaGCTTGTTGCTGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYVAHRV*LVAVGS
Trigger: GCTGCCAACAGCAACAAGGCACACCCTGTGAGCAAC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTGCTGGCAGGCACACTaGAGCCTGAAAGGATCCAAT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICCWQAH*SLKGSN
Trigger: ATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCCTCCACATGTATTGTaGTGGCAGGCACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMPPHVL*WQAHCS
Trigger: GCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATTTAAGGATGATGGGCTaGGGTGGCTTCGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYLRMMG*GGFGNR
Trigger: CCGATTCCCGAAGCCACCGCAGCCCATCATCCTTAA...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCCCCTTCTGTGTTGTaGTGGCAGCCCACACAAATG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICSPSVL*WQPTQM
Trigger: CATTTGTGTGGGCTGCCAGCACAACACAGAAGGGGA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAACAGTCACACCGGGTaGAGTTGCCTGGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKNSHTG*SCLATK
Trigger: CTTTGTTGCCAGGCAACTGCACCCGGTGTGACTGTT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACTCCGGAGTTTACTCTaGAGGTCAGCAATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIILRSLL*RSAMEA
Trigger: TGCCTCCATTGCTGACCTGCAGAGTAAACTCCGGAG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGCCTGGTCTATGCCCTaGAGAAGCTCAGAAACATGG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQAWSMP*RSSETW
Trigger: CCATGTTTCTGAGCTTCTGCAGGGCATAGACCAGGC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGCAGGGGAAAAGGCCTaGATCCTCTTCAGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIAGEKA*ILFSKG
Trigger: ACCCTTACTGAAGAGGATGCAGGCCTTTTCCCCTGC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAAGGGCCCTCAGTCTGTaGGACAAAGTGTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIRALSL*DKVSMV
Trigger: AACCATGGACACTTTGTCGCACAGACTGAGGGCCCT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACCTCATAGTAGGTGCTaGGCAGTAGGACCACGTAGT +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIPHSRC*AVGPRS
Trigger: ACTACGTGGTCCTACTGCCCAGCACCTACTATGAGG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATGTGTGGCCAATGACTaGTTCTCCTCCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINICVAND*FSSQKL
Trigger: CAGCTTCTGGGAGGAGAACCAGTCATTGGCCACACA...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAGTGGTATTAACGGCCTaGTTCAGGGCCTCACGAAGA +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKVVLTA*FRASRR
Trigger: TCTTCGTGAGGCCCTGAACCAGGCCGTTAATACCAC...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTGGCAGCTTGAAGAGTaGCCTTCAGGGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICWQLEE*PSGWHC
Trigger: ACAATGCCACCCTGAAGGCCACTCTTCAAGCTGCCA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATTGTCCATGGCCAGCATaGCTTGTGCCTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYCPWPA*LVPPGS
Trigger: AGATCCAGGAGGCACAAGCCATGCTGGCCATGGACA...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCAGACAAAGCCAGGCTaGCATTGTGAACTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICQTKPG*HCELHG
Trigger: ACCGTGGAGTTCACAATGCCAGCCTGGCTTTGTCTG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGGGCAGCTGTTCAGGTaGCACACCTCCCAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMGQLFR*HTSQVV
Trigger: TACTACTTGGGAGGTGTGCCACCTGAACAGCTGCCC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGCAGGTTGTTGTCCTaGGTGCCACGAAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSRLLS*VPRKPK
Trigger: CTTTGGCTTTCGTGGCACCCAGGACAACAACCTGCT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACAGCCACTGAAGTTGTaGAAGGTACCAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIQPLKL*KVPDTG
Trigger: GCCTGTGTCTGGTACCTTCCACAACTTCAGTGGCTG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAACAAGCATGGAGAGGTaGAGCCTATTCCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKTSMER*SLFLWD
Trigger: GTCCCACAGGAATAGGCTCCACCTCTCCATGCTTGT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGTGCCTTTCCCTGCTTaGAAAGTGCTAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIVPFPA*KVLGFL
Trigger: CAGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCAC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATCCACAAACTCAGTACTaGACTCCTCCACAGGTACCA +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYPQTQY*TPPQVP
Trigger: TGGTACCTGTGGAGGAGTTCAGTACTGAGTTTGTGG...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCAGCACTGCTGGGGTTaGAAGTTCCATGACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYQHCWG*KFHDCS
Trigger: TGAGCAGTCATGGAACTTTCAACCCCAGCAGTGCTG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATACACTGGTCACATCTTaGGCCCTGCACGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYTLVTS*ALHVLL
Trigger: AAGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGT...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAATGTGTGTGGCCAATaGCTGGTTCTCCTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQNVCGQ*LVLLPE
Trigger: TTCTGGGAGGAGAACCAGTCATTGGCCACACACATT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTTCTCCACGGTaGCAGACATGTGGCCAAACT +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIISVSPR*QTCGQT
Trigger: AGTTTGGCCACATGTCTGTCACCGTGGAGAAACAGA...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATATTGCCCTGGGTCCCTaGAGCATTGCAATCACAGTT +
Preference number: 4 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYIALGP*SIAITV
Trigger: AACTGTGATTGCAATGCTGCAGGGACCCAGGGCAAT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGTTCCAGGAAGGCGATaGTCATTTGGTTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYVPGRR*SFGCPA
Trigger: TGCAGGGCAACCAAATGAGCATCGCCTTCCTGGAAC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGAGATCCTTGGCCCATaGGAGATGCCAGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYEILGP*EMPAHS
Trigger: TGAATGAGCTGGCATCTCGCATGGGCCAAGGATCTC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGTTCCTGTTTCCATTaGAGGGCTTCCTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKSSCFH*RASFSR
Trigger: ACGGCTGAAGGAAGCCCTGCAATGGAAACAGGAACT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTCCCCCAAACTGGTATaGATCCTGAATAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQSPKLV*ILNSPR
Trigger: CCTGGGACTATTCAGGATGCATACCAGTTTGGGGGA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGTGCCTTGTTGCTGTTaGCAGCTGTACAGATGTCAC +
Preference number: 4 (lower is better)
Translates to: FQISVLTVVGQEEQSINIVPCCC*QLYRCH
Trigger: GTGACATCTGTACAGCTGCCAACAGCAACAAGGCAC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCCAAACAATCCCTCTTaGAGGAGGCAAAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQPNNPS*RRQRTA
Trigger: GGCAGTTCTTTGCCTCCTCCAAGAGGGATTGTTTGG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATCTCTCGTGTCATTGTaGGGAAATGAAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKSLVSL*GNEGRG
Trigger: CCCTCTGCCTTCATTTCCCCACAATGACACGAGAGA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCTACAGCGCTCACATTaGTCCCCTTCTGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMLQRSH*SPSVLC
Trigger: GCACAACACAGAAGGGGACCAATGTGAGCGCTGTAG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTAGGGTGGCATTGTCCTaGGACAGTTCCTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICRVALS*DSSCFH
Trigger: ATGGAAACAGGAACTGTCCCAGGACAATGCCACCCT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTGGGCTCTGGATGTaGAACTTGAGGGCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMTGLWM*NLRAVY
Trigger: GTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGT...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTACACTCCCCATGTTCTaGTGTAGGTCAAACACACGC +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPTLPMF*CRSNTR
Trigger: GCGTGTGTTTGACCTACACCAGAACATGGGGAGTGT...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTTCACATAGGGCATCTTaGCCTTGGGGAGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: VVGQEEQSINIISVLQSPSHRAS*PWGALM
Trigger: CATTAGAGCTCCCCAAGGCCAAGATGCCCTATGTGA...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATAAACGGCCTGTGGTGTaGTTGCTCTGTGTGTCTACC +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYKRPVV*LLCVST
Trigger: GGTAGACACACAGAGCAACCACACCACAGGCCGTTT...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCCCATCTCTTGGTGTaGATCCTCACCGACATATTC +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIISHLLV*ILTDIF
Trigger: GAATATGTCGGTGAGGATTCACACCAAGAGATGGGA...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGGGTTGAAAGTTCCATaGCTGCTCACACAGAAGACC +
Preference number: 4 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMGLKVP*LLTQKT
Trigger: GGTCTTCTGTGTGAGCAGTCATGGAACTTTCAACCC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCAAAATTGTAGAGGCTaGCCACCTCCTCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICQNCRG*PPPHSV
Trigger: CACTGAATGAGGAGGTGGTCAGCCTCTACAATTTTG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCAGCAAAGACCCTTTaGGTTTCCACCTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICSAKTL*VSTSWF
Trigger: GAACCAAGAGGTGGAAACTCAAAGGGTCTTTGCTGA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR GCA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGGCTTATACTCTGCTaGTCTAGAGTCTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRLILC*SRVCSC
Trigger: GCAGCTACAGACTCTAGAGCAGCAGAGTATAAGCCT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTAGTCCAGGTAGAAGATaGCTAGATGATGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICSPGRR*LDDAGC
Trigger: ACACCCAGCATCATCTAGCCATCTTCTACCTGGACT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAAGAAGCTCAGAAACATaGCCCAAGATGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QISVLTVVGQEEQSINIIRSSET*PKMRLA
Trigger: TGCCAGTCTCATCTTGGGCCATGTTTCTGAGCTTCT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR TCA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGGAGTTGTTCTCTCATaGGACTTTACTAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LTVVGQEEQSINIISVLQGVVLS*DFTSCS
Trigger: GCTACAACTAGTAAAGTCTCATGAGAGAACAACTCC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGAAGTTATAGGCGCCTaGTACACACATATCACAATG +
Preference number: 4 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYEVIGA*YTHITM
Trigger: CATTGTGATATGTGTGTACCAGGCGCCTATAACTTC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CCA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTTTACTAGTTGTAGCTaGTCATCCACATACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICFTSCS*SSTYSH
Trigger: ATGGCTGTATGTGGATGACCAGCTACAACTAGTAAA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CTGCATTCCCCAGCGGACGGACACCCTGTGCCACTGGCCAGCCCGTaGGTGCTGGCGACTCTGGACCTGGAGCCGGGGCCCAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LHSPADGHPVPLASP*VLATLDLEPGPRAL
Trigger: GAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CGCCAGCCACCGGACCCCCAACCAGCTTGCAGTAGAGGTCCTCGGTaGGGCGTGAGACACTGCGCGTCGGGGCCTCCTCGCCGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RQPPDPQPACSRGPR*GVRHCASGPPRRRS
Trigger: CGACCTGCGGCGAGGAGGCCCCGACGCGCAGTGTCTCACGCCCCACCGAGGACCTCTACTGCAAGCTGGTTGGGGGTCCGGTGGCTGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCCCAGCGGACGGACACCCTGTGCCACTGGCCAGCCCGTGAGTGCTaGCGACTCTGGACCTGGAGCCGGGGCCCAGGGCCCTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: PQRTDTLCHWPAREC*RLWTWSRGPGPSVC
Trigger: ACAGACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATTCCCCAGCGGACGGACACCCTGTGCCACTGGCCAGCCCGTGAGTaGTGGCGACTCTGGACCTGGAGCCGGGGCCCAGGGCCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: IPQRTDTLCHWPARE*WRLWTWSRGPGPSV
Trigger: GACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGGAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ATCAGCCTCTGGGCTTCGGCCAGTTCGGCCTCTGCCACTGCCCCCTaGGCCCCCAGGTCACGCGTCCGCATATCCCAGAGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: ISLWASASSASATAP*APRSRVRISQSSRS
Trigger: GGAGCGGCTGCTCTGGGATATGCGGACGCGTGACCTGGGGGCCCAGGGGGCAGTGGCAGAGGCCGAACTGGCCGAAGCCCAGAGGCTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GCCCCGCTGCACCACCATCTCCCATGTGCGGCTGGCCTGCCTCAGTaGCTGGCCTGCCGCATCCTCGGCAGCCTGAACGGCCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: APLHHHLPCAAGLPQ*LACRILGSLNGLKD
Trigger: ATCCTTCAGGCCGTTCAGGCTGCCGAGGATGCGGCAGGCCAGGCACTGAGGCAGGCCAGCCGCACATGGGAGATGGTGGTGCAGCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCAGTAGCCAGGGGCGCACTCGAGGCACTGGGGTCCTGTGGTCCCTaGCTGGCAGTGACACTGACCGCTCTGAGGGTGGCACTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: PVARGALEALGSCGP*LAVTLTALRVALGA
Trigger: GGCTCCGAGTGCCACCCTCAGAGCGGTCAGTGTCACTGCCAGCCAGGGACCACAGGACCCCAGTGCCTCGAGTGCGCCCCTGGCTACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CTCCAGCTGCTAGGCCCCGCTGCACCACCATCTCCCATGTGCGGCTaGCCTGCCTCAGTGCCTGGCCTGCCGCATCCTCGGCAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: LQLLGPAAPPSPMCG*PASVPGLPHPRQPE
Trigger: TTCAGGCTGCCGAGGATGCGGCAGGCCAGGCACTGAGGCAGGCCAGCCGCACATGGGAGATGGTGGTGCAGCGGGGCCTAGCAGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ACGGACACCCTGTGCCACTGGCCAGCCCGTGAGTGCTGGCGACTCTaGACCTGGAGCCGGGGCCCAGGGCCCTCAGTCTGTGCGACAAAG +
Preference number: 5 (lower is better)
Translates to: TDTLCHWPARECWRL*TWSRGPGPSVCATK
Trigger: CTTTGTCGCACAGACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AGCTGGATCTGCTGCATTCCCCAGCGGACGGACACCCTGTGCCACTaGCCAGCCCGTGAGTGCTGGCGACTCTGGACCTGGAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SWICCIPQRTDTLCH*PARECWRLWTWSRG
Trigger: GCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAGCAGATCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CGTGCAGCAGAAAGGCATAGCGGCCCAGGGTGGGCACCTGGGTGGTaGAGACCACCGTGCCCTGGGGGTGGCGCAGCAAGGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RAAERHSGPGWAPGW*RPPCPGGGAARWVL
Trigger: CAGAACCCACCTTGCTGCGCCACCCCCAGGGCACGGTGGTCTTCACCACCCAGGTGCCCACCCTGGGCCGCTATGCCTTTCTGCTGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ACCCTGTGCCACTGGCCAGCCCGTGAGTGCTGGCGACTCTGGACCTaGAGCCGGGGCCCAGGGCCCTCAGTCTGTGCGACAAAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TLCHWPARECWRLWT*SRGPGPSVCATKCP
Trigger: TGGACACTTTGTCGCACAGACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCCAGGGTGGGCACCTGGGTGGTGAAGACCACCGTGCCCTGGGGGTaGCGCAGCAAGGTGGGTTCTGCATTAGGATCCACCGCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: PRVGTWVVKTTVPWG*RSKVGSALGSTAVG
Trigger: GCCAACTGCGGTGGATCCTAATGCAGAACCCACCTTGCTGCGCCACCCCCAGGGCACGGTGGTCTTCACCACCCAGGTGCCCACCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TCACAGTGTATGCCATGGCCCCCAGGCTTGCCCGGTACAGGCACCTaGTGCTGCTGGCTGCAGGTGTCACAGCGTTCCCCGCTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SQCMPWPPGLPGTGT*CCWLQVSQRSPLSP
Trigger: GGGGCTCAGCGGGGAACGCTGTGACACCTGCAGCCAGCAGCACCAGGTGCCTGTACCGGGCAAGCCTGGGGGCCATGGCATACACTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ACTCCAGGCCACGGGACAGGGGTGGGCTCTGCCACCAGCGCTCCGTaGCATCGATGGCGTTGCTCACAGGGTGTGCCTTGTTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: TPGHGTGVGSATSAP*HRWRCSQGVPCCCW
Trigger: CCAACAGCAACAAGGCACACCCTGTGAGCAACGCCATCGATGGCACGGAGCGCTGGTGGCAGAGCCCACCCCTGTCCCGTGGCCTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GGTGAACCTGGCCAGGCGGAGGGTACGCCAGTTCCAGGAAGGCGATaGTCATTTGGTTGCCCTGCAGCACGACGTCCGGCCGGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: GEPGQAEGTPVPGRR*SFGCPAARRPAGSR
Trigger: ACGAGAGCCGGCCGGACGTCGTGCTGCAGGGCAACCAAATGAGCATCGCCTTCCTGGAACTGGCGTACCCTCCGCCTGGCCAGGTTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ACCACAAGCTGGATCTGCTGCATTCCCCAGCGGACGGACACCCTGTaGCACTGGCCAGCCCGTGAGTGCTGGCGACTCTGGACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TTSWICCIPQRTDTL*HWPARECWRLWTWS
Trigger: GCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAGCAGATCCAGCTTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CGGGGTCGACACCTACACTGGCCGGTTGTCGGGTCACAGGTTGTATaGAAGGAGCCATCGGCAGAGCAGTGGCAGGGGATGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RGRHLHWPVVGSQVV*KEPSAEQWQGMQLG
Trigger: CCCCAGCTGCATCCCCTGCCACTGCTCTGCCGATGGCTCCTTGCATACAACCTGTGACCCGACAACCGGCCAGTGTAGGTGTCGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GGCAGGAAGACCTCCTACAGAGAGGGTGTAGGGCTGTGGTCGCTCTaGCCTGGGGACCCGATGGTGGAGAGCCTTCTGGCTCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: GRKTSYREGVGLWSL*PGDPMVESLLAPGL
Trigger: CAGACCTGGAGCCAGAAGGCTCTCCACCATCGGGTCCCCAGGGCAGAGCGACCACAGCCCTACACCCTCTCTGTAGGAGGTCTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GGGGAGACACTGGGCTTGGCCTGCCTCTGGGTCAGTGCCTTTCCCTaGTTGGAAAGTGCTAGGGTTCCTGAGGGGCATCCGCGCATCCCC +
Preference number: 5 (lower is better)
Translates to: GETLGLACLWVSAFP*LESARVPEGHPRIP
Trigger: GGGGATGCGCGGATGCCCCTCAGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CACGGGACAGGGGTGGGCTCTGCCACCAGCGCTCCGTGCCATCGATaGCGTTGCTCACAGGGTGTGCCTTGTTGCTGTTGGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: HGTGVGSATSAPCHR*RCSQGVPCCCWQLY
Trigger: GTACAGCTGCCAACAGCAACAAGGCACACCCTGTGAGCAACGCCATCGATGGCACGGAGCGCTGGTGGCAGAGCCCACCCCTGTCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCTGTCCCCCTCAAAGCCGGTGCGGCACATGCACTGGCCAGACTCTaGGTCACAGAGGCTGTTGGCTACCCCAGGGCTGGAACACTGGCA +
Preference number: 5 (lower is better)
Translates to: PVPLKAGAAHALARL*VTEAVGYPRAGTLA
Trigger: TGCCAGTGTTCCAGCCCTGGGGTAGCCAACAGCCTCTGTGACCCAGAGTCTGGCCAGTGCATGTGCCGCACCGGCTTTGAGGGGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GCTCTGTGGCTGGCAGACCAAGCAGTCAGGGGGAACAGTGCGTGGTaGACAGATACACTGGCCCGTGAGCTCGTCACACAGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ALWLADQAVRGNSAW*TDTLARELVTQAGS
Trigger: GGAGCCCGCCTGTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CTGCACTGGCCGCTGTCCATGTCACAGGTAGGGTCCGTCAGCTCCTaGACGCCGGGCCCTGAGCAGTTACACTCCTCACAGCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: LHWPLSMSQVGSVSS*TPGPEQLHSSQPTK
Trigger: CTTGGTGGGCTGTGAGGAGTGTAACTGCTCAGGGCCCGGCGTCCAGGAGCTGACGGACCCTACCTGTGACATGGACAGCGGCCAGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GAGCGCAGATCTGCGTGCAGCAGCTCTATCTCAGGCCGATGCTCGTaGGGTACCACCTGCCGGTCACTGCTCAACAGCACCCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ERRSACSSSISGRCS*GTTCRSLLNSTQPS
Trigger: GGAGGGCTGGGTGCTGTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGAGATAGAGCTGCTGCACGCAGATCTGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTGACACTGACCGCTCTGAGGGTGGCACTCGGAGCCCTTGGCAGCTaGTCCACAGGCACAAGGGCGGCAGCCCTGGCATTGCTCAAAACC +
Preference number: 5 (lower is better)
Translates to: VTLTALRVALGALGS*STGTRAAALALLKT
Trigger: GGTTTTGAGCAATGCCAGGGCTGCCGCCCTTGTGCCTGTGGACCAGCTGCCAAGGGCTCCGAGTGCCACCCTCAGAGCGGTCAGTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp AGCAGTCAGGGGGAACAGTGCGTGGTGGACAGATACACTGGCCCGTaGGCTCGTCACACAGGCGGGCTCCACAGTCACAGGGCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SSQGEQCVVDRYTGP*ARHTGGLHSHRACS
Trigger: ACTGCAGGCCCTGTGACTGTGGAGCCCGCCTGTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCCCCTGACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GACGGAGGCAGCCTCGACAGGCACCCGTCAGGGGGTCGCAGTCACTaGAGATCATGTTGGGGTCTCCATTACCGCTGCAGTCGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: DGGSLDRHPSGGRSH*RSCWGLHYRCSRRA
Trigger: AGCCCTGCGACTGCAGCGGTAATGGAGACCCCAACATGATCTTCAGTGACTGCGACCCCCTGACGGGTGCCTGTCGAGGCTGCCTCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp ATGGGTGCCACATCAGGAAGTGCCAGGGGCAGGAAGCCGTGGCCGTaGAAAGTCATGGTGCGTCCCACTAGCAGGTCAGCGGTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: MGATSGSARGRKPWP*KVMVRPTSRSAVQP
Trigger: CGGCTGCACCGCTGACCTGCTAGTGGGACGCACCATGACTTTTCACGGCCACGGCTTCCTGCCCCTGGCACTTCCTGATGTGGCACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GCTCTATCTCAGGCCGATGCTCGTGGGGTACCACCTGCCGGTCACTaGTCAACAGCACCCAGCCCTCCATGTCCACGAACTCATGGCGGG +
Preference number: 5 (lower is better)
Translates to: ALSQADARGVPPAGH*STAPSPPCPRTHGG
Trigger: CCCGCCATGAGTTCGTGGACATGGAGGGCTGGGTGCTGTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGAGATAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GCCACAGAGCGCAGATCTGCGTGCAGCAGCTCTATCTCAGGCCGATaGTCGTGGGGTACCACCTGCCGGTCACTGCTCAACAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: ATERRSACSSSISGR*SWGTTCRSLLNSTQ
Trigger: CTGGGTGCTGTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGAGATAGAGCTGCTGCACGCAGATCTGCGCTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp TGTCCAAGGATGGTCTCCTCCAGGGCACTGCTGTTGGCTAACAGCTaGCGGGCTCCAGCTGCTAGGCCCCGCTGCACCACCATCTCCCAT +
Preference number: 5 (lower is better)
Translates to: CPRMVSSRALLLANS*RAPAARPRCTTISH
Trigger: ATGGGAGATGGTGGTGCAGCGGGGCCTAGCAGCTGGAGCCCGGCAGCTGTTAGCCAACAGCAGTGCCCTGGAGGAGACCATCCTTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTGGGCACCCCGGAAGTTGGGTTTGCAGACACACCGTCCCAACCTTaGGTCCTTCCGGCAGGCATTGCCCTGGGTCCCTGCAGCATTGCA +
Preference number: 5 (lower is better)
Translates to: VGTPEVGFADTPSQP*VLPAGIALGPCSIA
Trigger: TGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGTGTCTGCAAACCCAACTTCCGGGGTGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GACTCTGGGTCACAGAGGCTGTTGGCTACCCCAGGGCTGGAACACTaGCATGGGTGGCAGCTAGGCCCGTGGAATCCAGGAGCACAGAGC +
Preference number: 5 (lower is better)
Translates to: DSGSQRLLATPGLEH*HGWQLGPWNPGAQS
Trigger: GCTCTGTGCTCCTGGATTCCACGGGCCTAGCTGCCACCCATGCCAGTGTTCCAGCCCTGGGGTAGCCAACAGCCTCTGTGACCCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GCTGGCGCTCAGCCCCCAGTACCCAGGTTTACAGCGATCACAGCTTaGCCCTTCCACGTGAGCCCGGCACATACAGGGAGCCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: AGAQPPVPRFTAITA*PFHVSPAHTGSLCL
Trigger: GAGACACAGGCTCCCTGTATGTGCCGGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CAGACCAAGCAGTCAGGGGGAACAGTGCGTGGTGGACAGATACACTaGCCCGTGAGCTCGTCACACAGGCGGGCTCCACAGTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: QTKQSGGTVRGGQIH*PVSSSHRRAPQSQG
Trigger: GCCCTGTGACTGTGGAGCCCGCCTGTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCCCCTGACTGCTTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ACGCCGGGCCCTGAGCAGTTACACTCCTCACAGCCCACCAAGGGGTaGCAACCAAAGCTCTGTGGCTGGCAGACCAAGCAGTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: TPGPEQLHSSQPTKG*QPKLCGWQTKQSGG
Trigger: TCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGCTTTGGTTGCCACCCCTTGGTGGGCTGTGAGGAGTGTAACTGCTCAGGGCCCGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGGTCCCCCGTGTTCTTGCCAGGTTCGGGCGCTGGCACTGGGCTCTaGATGTGGAACTTGAGGGCAGTGTACGCAGCAAGGTCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: WSPVFLPGSGAGTGL*MWNLRAVYAARSAR
Trigger: CCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CGACATGGGGGCTGTAGAGAGCAGGAGGCCCTGGGAAGCCGCATGTaGACGGACAAGCATGGAGAGGTGGAGCCTATTCCTGTGGGACGG +
Preference number: 5 (lower is better)
Translates to: RHGGCREQEALGSRM*TDKHGEVEPIPVGR
Trigger: CCGTCCCACAGGAATAGGCTCCACCTCTCCATGCTTGTCCGTCCACATGCGGCTTCCCAGGGCCTCCTGCTCTCTACAGCCCCCATGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GTCCATGTCACAGGTAGGGTCCGTCAGCTCCTGGACGCCGGGCCCTaGGCAGTTACACTCCTCACAGCCCACCAAGGGGTGGCAACCAAA +
Preference number: 5 (lower is better)
Translates to: VHVTGRVRQLLDAGP*AVTLLTAHQGVATK
Trigger: TTTGGTTGCCACCCCTTGGTGGGCTGTGAGGAGTGTAACTGCTCAGGGCCCGGCGTCCAGGAGCTGACGGACCCTACCTGTGACATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp TCTTGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGTGGAACTTaGGGGCAGTGTACGCAGCAAGGTCGGCAAGGTCTCGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: SCQVRALALGSGCGT*GQCTQQGRQGLVGY
Trigger: GTACCCCACGAGACCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GACTGGCACTCATTGGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTaGTGGTTGAAGCCTGGACAGCATCGGTCACAAGAGCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: DWHSLALSVVAGFHG*WLKPGQHRSQEPPH
Trigger: ATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCCAATGAGTGCCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GCCACCTCCAGTACCACTCTACGCAAGGAGACACTGGAAGAGGTCTaGGAGAAGAGAGCACGGATCTGCAGCTGCTCCAGGCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ATSSTTLRKETLEEV*EKRARICSCSRPAS
Trigger: GCTGGCCGGCCTGGAGCAGCTGCAGATCCGTGCTCTCTTCTCGCAGACCTCTTCCAGTGTCTCCTTGCGTAGAGTGGTACTGGAGGTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp AGCCAGGTGCACACCGCTCGCAGGAGGCACCAGCATAGCCTGGCCTaGAGAGGCACTGGGTTCGGCCATTTCTTAAGACGCAACCGTCTG +
Preference number: 5 (lower is better)
Translates to: SQVHTARRRHQHSLA*RGTGFGHFLRRNRL
Trigger: CAGACGGTTGCGTCTTAAGAAATGGCCGAACCCAGTGCCTCTGCAGGCCAGGCTATGCTGGTGCCTCCTGCGAGCGGTGTGCACCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATACCCTTGATGCAGCCACGGACAGAGCCTCCGGAGGGGAAGAGCTaGCGTAGGCTCAAGGGCAGCTGTTCAGGTGGCACACCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: IPLMQPRTEPPEGKS*RRLKGSCSGGTPPK
Trigger: CTTGGGAGGTGTGCCACCTGAACAGCTGCCCTTGAGCCTACGGCAGCTCTTCCCCTCCGGAGGCTCTGTCCGTGGCTGCATCAAGGGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTGGTTGAAGCCTaGACAGCATCGGTCACAAGAGCCTCCACATGTATTGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GAVRGGGLPRLLVEA*TASVTRASTCIVLA
Trigger: TGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGCAGCTGGGGAAGCCGTAGAAGCCGGGGCTACATTCCTGACAAGTaGCACCTGTGTAGCCAGGACGGCAGTGGCACAAACCGCCCACTC +
Preference number: 5 (lower is better)
Translates to: CSWGSRRSRGYIPDK*HLCSQDGSGTNRPL
Trigger: GAGTGGGCGGTTTGTGCCACTGCCGTCCTGGCTACACAGGTGCCACTTGTCAGGAATGTAGCCCCGGCTTCTACGGCTTCCCCAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGCCTCGTGGGTCACAGCTGCAGCGTGTGCAGCCTTCAGGGTTGCTaGCGCTCAGCCCCCAGTACCCAGGTTTACAGCGATCACAGCTTG +
Preference number: 5 (lower is better)
Translates to: CLVGHSCSVCSLQGC*RSAPSTQVYSDHSL
Trigger: CAAGCTGTGATCGCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACCCACGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TTCCAGCCGCATGTGGTGCAGGTCTGGCAAGTAGTGGTCCTTCGCTaGCTCGCTACAGGTGGGTCCTTGGGTGTTAGGGCGGCACCTGCA +
Preference number: 5 (lower is better)
Translates to: FQPHVVQVWQVVVLR*LATGGSLGVRAAPA
Trigger: TGCAGGTGCCGCCCTAACACCCAAGGACCCACCTGTAGCGAGCCAGCGAAGGACCACTACTTGCCAGACCTGCACCACATGCGGCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AAAGCTCTGTGGCTGGCAGACCAAGCAGTCAGGGGGAACAGTGCGTaGTGGACAGATACACTGGCCCGTGAGCTCGTCACACAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: KALWLADQAVRGNSA*WTDTLARELVTQAG
Trigger: GCCCGCCTGTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GGCCATGGCACTGACAGGGGACACATCGGCCTAGGAAGAGACCCTTaGTGTCCCGGTAATAGCCAGGGGCACATTCCTGGCACGAGTCCC +
Preference number: 5 (lower is better)
Translates to: GHGTDRGHIGLGRDP*CPGNSQGHIPGTSP
Trigger: GGGACTCGTGCCAGGAATGTGCCCCTGGCTATTACCGGGACACCAAGGGTCTCTTCCTAGGCCGATGTGTCCCCTGTCAGTGCCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTGGCCAATGACTGGTTCTCCTCCCAGAAGCTGGTCAGCTGCTCCTaGACACGAGCCATCAGCCTCTGGGCTTCGGCCAGTTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: VANDWFSSQKLVSCS*TRAISLWASASSAS
Trigger: AGAGGCCGAACTGGCCGAAGCCCAGAGGCTGATGGCTCGTGTCCAGGAGCAGCTGACCAGCTTCTGGGAGGAGAACCAGTCATTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTGGACACTGAACTGCTTGCATCCCGTTCCACCTGGCTCAGGTCCTaGCCTTGCAGGCCTCCCAGCTGGCTCTGCCACCTCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: VDTELLASRSTWLRS*PCRPPSWLCHLSTF
Trigger: GAATGTGGAGAGGTGGCAGAGCCAGCTGGGAGGCCTGCAAGGCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCCGTGTTCTTGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGTaGAACTTGAGGGCAGTGTACGCAGCAAGGTCGGCAAGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PVFLPGSGAGTGLWM*NLRAVYAARSARSR
Trigger: ACGAGACCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CACCCTGTCTCCCAGATAGGAGGGCGGAGCCTGCCAGTACAGCTCTaGGAAAGTGTCAGCCACAGAGCGCAGATCTGCGTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HPVSQIGGRSLPVQL*ESVSHRAQICVQQL
Trigger: GAGCTGCTGCACGCAGATCTGCGCTCTGTGGCTGACACTTTCTCAGAGCTGTACTGGCAGGCTCCGCCCTCCTATCTGGGAGACAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CGCAGCAAGGTCGGCAAGGTCTCGTGGGGTACGCAGTCGTACCCCTaGACGCCCATTGAACTTCATGGACACCTTGACCTTGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RSKVGKVSWGTQSYP*TPIELHGHLDLAGG
Trigger: GCCGCCAGCAAGGTCAAGGTGTCCATGAAGTTCAATGGGCGTTCAGGGGTACGACTGCGTACCCCACGAGACCTTGCCGACCTTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp AATAGCCAAGGGCACAGTGGTCACACCTGTCCCCCTCAAAGCCGGTaGGGCACATGCACTGGCCAGACTCTGGGTCACAGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: NSQGHSGHTCPPQSR*GTCTGQTLGHRGCW
Trigger: CCAACAGCCTCTGTGACCCAGAGTCTGGCCAGTGCATGTGCCGCACCGGCTTTGAGGGGGACAGGTGTGACCACTGTGCCCTTGGCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ACTGAACTGCTTGCATCCCGTTCCACCTGGCTCAGGTCCTGGCCTTaGAGGCCTCCCAGCTGGCTCTGCCACCTCTCCACATTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TELLASRSTWLRSWP*RPPSWLCHLSTFFC
Trigger: GCAGAAGAATGTGGAGAGGTGGCAGAGCCAGCTGGGAGGCCTGCAAGGCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp TGGCCAGCAGCTGTGGCAATGTCTTCTCCAGGGTGGACACTGAACTaGTTGCATCCCGTTCCACCTGGCTCAGGTCCTGGCCTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: WPAAVAMSSPGWTLN*LHPVPPGSGPGLAG
Trigger: GCCTGCAAGGCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACATTGCCACAGCTGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGGCACTCATTGGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTaGTTGAAGCCTGGACAGCATCGGTCACAAGAGCCTCCACATGTA +
Preference number: 5 (lower is better)
Translates to: WHSLALSVVAGFHGC*LKPGQHRSQEPPHV
Trigger: TACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCCAATGAGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCCACGGTAGTTGGCAGGGCACATACACAGTTCCACATTGCTGGCTaGAGGCCCCCTACCAGCCTCGCTAGCCACCTCCAGTACCACTCT +
Preference number: 5 (lower is better)
Translates to: PTVVGRAHTQFHIAG*RPPTSLASHLQYHS
Trigger: AGAGTGGTACTGGAGGTGGCTAGCGAGGCTGGTAGGGGGCCTCCAGCCAGCAATGTGGAACTGTGTATGTGCCCTGCCAACTACCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GGTAATAGCCAGGGGCACATTCCTGGCACGAGTCCCCACGGTAGTTaGCAGGGCACATACACAGTTCCACATTGCTGGCTGGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GNSQGHIPGTSPHGS*QGTYTVPHCWLEAP
Trigger: GGGGGCCTCCAGCCAGCAATGTGGAACTGTGTATGTGCCCTGCCAACTACCGTGGGGACTCGTGCCAGGAATGTGCCCCTGGCTATTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AGGGCACCAGCCCGCTCGAGGTCATCCAGAAGGAGAACCACACAGTaGTCACACACTTCACAGTGTATGCCATGGCCCCCAGGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: RAPARSRSSRRRTTQ*SHTSQCMPWPPGLP
Trigger: GGGCAAGCCTGGGGGCCATGGCATACACTGTGAAGTGTGTGACCACTGTGTGGTTCTCCTTCTGGATGACCTCGAGCGGGCTGGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TTGGATCGCCTTGCTGGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTaGGTCGGCCTTCTTCAGGCCAGAGCCGAAGTCATAGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: LDRLAGCRQGLWGLQ*VGLLQARAEVIEEH
Trigger: GTGCTCTTCTATGACTTCGGCTCTGGCCTGAAGAAGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AGTGCTGGAGAACCAGCCAAGCTCTCTGGCAAACGGCCTGTGGTGTaGTTGCTCTGTGTGTCTACCTCCAGCCGGAGTGTGTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SAGEPAKLSGKRPVV*LLCVSTSSRSVSLP
Trigger: GGGCAGGGACACACTCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GTGTTAGGGCGGCACCTGCAGGCACCTGTCTTTGGTTCACAGCCTTaGCCCAGGGCACCACCAACATCACACCTACAGCTACGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VLGRHLQAPVFGSQP*PRAPPTSHLQLRQP
Trigger: TGGCTGCCGTAGCTGTAGGTGTGATGTTGGTGGTGCCCTGGGTCAAGGCTGTGAACCAAAGACAGGTGCCTGCAGGTGCCGCCCTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CAAATGCCAGAGCCAGGAAGGCAGCGATCTGAATGGCCATGGCACTaGCAGGGGACACATCGGCCTAGGAAGAGACCCTTGGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: QMPEPGRQRSEWPWH*QGTHRPRKRPLVSR
Trigger: CCGGGACACCAAGGGTCTCTTCCTAGGCCGATGTGTCCCCTGTCAGTGCCATGGCCATTCAGATCGCTGCCTTCCTGGCTCTGGCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp TGTCCTGGGTGCCACGAAAGCCAAAGCCAGAATAGACCACTTCGGTaGTGGGTGCCACATCAGGAAGTGCCAGGGGCAGGAAGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: CPGCHESQSQNRPLR*WVPHQEVPGAGSRG
Trigger: GCCACGGCTTCCTGCCCCTGGCACTTCCTGATGTGGCACCCATCACCGAAGTGGTCTATTCTGGCTTTGGCTTTCGTGGCACCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GGTTGCTCTGTGTGTCTACCTCCAGCCGGAGTGTGTCCCTGCCCATaGTCACTGCCACTCGGTGCCACCGTCCATCACAAAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: GCSVCLPPAGVCPCP*SLPLGATVHHKAWG
Trigger: ACCCCAAGCTTTGTGATGGACGGTGGCACCGAGTGGCAGTGATCATGGGCAGGGACACACTCCGGCTGGAGGTAGACACACAGAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CCGTCCCAACCTTGGGTCCTTCCGGCAGGCATTGCCCTGGGTCCCTaGAGCATTGCAATCACAGTTCACGATTTGTCCAGCGGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: PSQPWVLPAGIALGP*SIAITVHDLSSGKH
Trigger: GTGCTTCCCGCTGGACAAATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATGTGTGTGGCCAATGACTGGTTCTCCTCCCAGAAGCTGGTCAGCTaGTCCTGGACACGAGCCATCAGCCTCTGGGCTTCGGCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: MCVANDWFSSQKLVS*SWTRAISLWASASS
Trigger: CGAACTGGCCGAAGCCCAGAGGCTGATGGCTCGTGTCCAGGAGCAGCTGACCAGCTTCTGGGAGGAGAACCAGTCATTGGCCACACACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CTCTTCAGTAAGGGTGTCCAGGCTCCATCCAGGCTGGCCGCCAGGTaGTCTAGGTCCTCCTTAGCCTGGTCTATGCCCTGCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LFSKGVQAPSRLAAR*SRSSLAWSMPCRSS
Trigger: TGAGCTTCTGCAGGGCATAGACCAGGCTAAGGAGGACCTAGAGCACCTGGCGGCCAGCCTGGATGGAGCCTGGACACCCTTACTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATGTGGCCAAACTGGAGGGTCCTGTCGATGCTGACGGCTGCAAACTaGTCCCCGATGTTCTCGTCGATGCTGAGAGTTGTGGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: MWPNWRVLSMLTAAN*SPMFSSMLRVVGPA
Trigger: GGCTGGCCCCACAACTCTCAGCATCGACGAGAACATCGGGGAGCAGTTTGCAGCCGTCAGCATCGACAGGACCCTCCAGTTTGGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCAGGCAGACACCTCCACCCTGGTACACGTTGTCCTGGTTCTGGCTaGCATTGCGCCGATCCACCTCAGGGTCGTAGTAACAGTCGTAGG +
Preference number: 5 (lower is better)
Translates to: PGRHLHPGTRCPGSG*HCADPPQGRSNSRR
Trigger: CCTACGACTGTTACTACGACCCTGAGGTGGATCGGCGCAATGCCAGCCAGAACCAGGACAACGTGTACCAGGGTGGAGGTGTCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CTAAAGTTCTCAAACTCCAGGGGGTTGAAGCCAAAGCGTACAGCGTaGCCCTCGGGAGTGGCCGCCTCCTCTAGTTCCAGCCGCATGTGG +
Preference number: 5 (lower is better)
Translates to: LKFSNSRGLKPKRTA*PSGVAASSSSSRMW
Trigger: CCACATGCGGCTGGAACTAGAGGAGGCGGCCACTCCCGAGGGCCACGCTGTACGCTTTGGCTTCAACCCCCTGGAGTTTGAGAACTTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AAAGCCCCTCTGGGGCACAGTGACAAAGGCAGGCTCAGTGCTGGGTaGGAAAGCCACTGGCTGGCTCTGCTCTGTGCAGTTGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: KAPLGHSDKGRLSAG*ESHWLALLCAVGTA
Trigger: AGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCCAGCACTGAGCCTGCCTTTGTCACTGTGCCCCAGAGGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CACTCCTCACAGCCCACCAAGGGGTGGCAACCAAAGCTCTGTGGCTaGCAGACCAAGCAGTCAGGGGGAACAGTGCGTGGTGGACAGATA +
Preference number: 5 (lower is better)
Translates to: HSSQPTKGWQPKLCG*QTKQSGGTVRGGQI
Trigger: TATCTGTCCACCACGCACTGTTCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGCTTTGGTTGCCACCCCTTGGTGGGCTGTGAGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTTACACTCCTCACAGCCCACCAAGGGGTGGCAACCAAAGCTCTGTaGCTGGCAGACCAAGCAGTCAGGGGGAACAGTGCGTGGTGGACA +
Preference number: 5 (lower is better)
Translates to: VTLLTAHQGVATKAL*LADQAVRGNSAWWT
Trigger: TGTCCACCACGCACTGTTCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGCTTTGGTTGCCACCCCTTGGTGGGCTGTGAGGAGTGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ACTCTGTGGTGTCCAGTAGCTGGCCTGCCTGACCTTGGACCCCTGTaGCCTGACTGCCCAGCCTCTCCGTGTCCTGTTGAAGGCTTATAC +
Preference number: 5 (lower is better)
Translates to: TLWCPVAGLPDLGPL*PDCPASPCPVEGLY
Trigger: GTATAAGCCTTCAACAGGACACGGAGAGGCTGGGCAGTCAGGCCACAGGGGTCCAAGGTCAGGCAGGCCAGCTACTGGACACCACAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AACAAAGTGGTCCCCCGTGTTCTTGCCAGGTTCGGGCGCTGGCACTaGGCTCTGGATGTGGAACTTGAGGGCAGTGTACGCAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: NKVVPRVLARFGRWH*ALDVELEGSVRSKV
Trigger: GACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTACAGAACAAAGTGGTCCCCCGTGTTCTTGCCAGGTTCGGGCGCTaGCACTGGGCTCTGGATGTGGAACTTGAGGGCAGTGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: VQNKVVPRVLARFGR*HWALDVELEGSVRS
Trigger: GCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GCAGAAGTGCTGGAGAACCAGCCAAGCTCTCTGGCAAACGGCCTGTaGTGTGGTTGCTCTGTGTGTCTACCTCCAGCCGGAGTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: AEVLENQPSSLANGL*CGCSVCLPPAGVCP
Trigger: GGGACACACTCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAGCACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CAGGCTCCCGAGGTGCAGAAGTGCTGGAGAACCAGCCAAGCTCTCTaGCAAACGGCCTGTGGTGTGGTTGCTCTGTGTGTCTACCTCCAG +
Preference number: 5 (lower is better)
Translates to: QAPEVQKCWRTSQAL*QTACGVVALCVYLQ
Trigger: CTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAGCACTTCTGCACCTCGGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CTGTTGGCAGCTGTACAGATGTCACAGTACTGGCCCTGGATTGTCTaGTTGGGATCTCCGCCAGCCACCGGACCCCCAACCAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LLAAVQMSQYWPWIV*LGSPPATGPPTSLQ
Trigger: CTGCAAGCTGGTTGGGGGTCCGGTGGCTGGCGGAGATCCCAATCAGACAATCCAGGGCCAGTACTGTGACATCTGTACAGCTGCCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp ACTCATTGGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTGGTTaGAGCCTGGACAGCATCGGTCACAAGAGCCTCCACATGTATTGT +
Preference number: 5 (lower is better)
Translates to: THWRCPWWRASTAAG*SLDSIGHKSLHMYC
Trigger: ACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCCAATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CTGAACTCCTCCACAGGTACCAGGGTGACGCTGTGCAGGAAGAAGTaGGCTTGCTCAGCTGTGAGCCGGATGCTAGCCTCAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LNSSTGTRVTLCRKK*ACSAVSRMLASESR
Trigger: CCTGGACTCTGAGGCTAGCATCCGGCTCACAGCTGAGCAAGCTCACTTCTTCCTGCACAGCGTCACCCTGGTACCTGTGGAGGAGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GTGGCTTCGGGAATCGGGAGGCTAGACAGGCAGCACTGCTGGGGTTaGAAGTTCCATGACTGCTCACACAGAAGACCCGGGGCTCCACAA +
Preference number: 5 (lower is better)
Translates to: VASGIGRLDRQHCWG*KFHDCSHRRPGAPQ
Trigger: TTGTGGAGCCCCGGGTCTTCTGTGTGAGCAGTCATGGAACTTTCAACCCCAGCAGTGCTGCCTGTCTAGCCTCCCGATTCCCGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GTAGAAGAGAGACAAGGAGGTGGCGGCATTCCGGCAGAATGGAGATaGGCTGCTGGGGCTAATGTGGTAGCCCTGGGTGGCACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VEERQGGGGIPAEWR*AAGANVVALGGTVA
Trigger: AGCCACTGTGCCACCCAGGGCTACCACATTAGCCCCAGCAGCTCATCTCCATTCTGCCGGAATGCCGCCACCTCCTTGTCTCTCTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp AGCAGCATCCAAGGAGAAGGTCCCCACGCGACACTGGTCACATCTTaGGCCCTGCACGTTCTCCTTGCAATGGCATTGGCCTGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SSIQGEGPHATLVTS*ALHVLLAMALACEG
Trigger: CCCCTCACAGGCCAATGCCATTGCAAGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGTCGCGTGGGGACCTTCTCCTTGGATGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp AGGCCGGCCAGCACCATCATGAGTTCTTCTCGGGACACGGGGTTGTaGGTCTCCAAGTGCCGGAAGTTCCCCTCTACCAGCTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: RPASTIMSSSRDTGL*VSKCRKFPSTSCSC
Trigger: ACAGCTACAGCTGGTAGAGGGGAACTTCCGGCACTTGGAGACTCACAACCCCGTGTCCCGAGAAGAACTCATGATGGTGCTGGCCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GCCAGACTCATACTGAGCCAGCTGGTCCCGAATGTGTGTGGCCAATaGCTGGTTCTCCTCCCAGAAGCTGGTCAGCTGCTCCTGGACACG +
Preference number: 5 (lower is better)
Translates to: ARLILSQLVPNVCGQ*LVLLPEAGQLLLDT
Trigger: CGTGTCCAGGAGCAGCTGACCAGCTTCTGGGAGGAGAACCAGTCATTGGCCACACACATTCGGGACCAGCTGGCTCAGTATGAGTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CAGTTTGGCCAGCAGCTGTGGCAATGTCTTCTCCAGGGTGGACACTaGACTGCTTGCATCCCGTTCCACCTGGCTCAGGTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QFGQQLWQCLLQGGH*TACIPFHLAQVLAL
Trigger: CAAGGCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACATTGCCACAGCTGCTGGCCAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp AGACACCTCCACCCTGGTACACGTTGTCCTGGTTCTGGCTGGCATTaGGCCGATCCACCTCAGGGTCGTAGTAACAGTCGTAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: RHLHPGTRCPGSGWH*ADPPQGRSNSRRHG
Trigger: GCCATGCCTACGACTGTTACTACGACCCTGAGGTGGATCGGCGCAATGCCAGCCAGAACCAGGACAACGTGTACCAGGGTGGAGGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATGGCATTGGCCTGTGAGGGGGTCACACACGCTAGCCATGGTGCCTaGCTCATGGCAGTCACAGGGGCGACAGCTAGGATAGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: MALACEGVTHASHGA*LMAVTGATARIAIE
Trigger: TTCTATGGCTATCCTAGCTGTCGCCCCTGTGACTGCCATGAGGCAGGCACCATGGCTAGCGTGTGTGACCCCCTCACAGGCCAATGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp TCAGCTTCTGAGCGTGGGCCTCAGCAGCCTCTACCAAGTCCACCTTaGTGCTGGCAGGGGAAAAGGCCTGCATCCTCTTCAGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SASERGPQQPLPSPP*CWQGKRPASSSVRV
Trigger: CACCCTTACTGAAGAGGATGCAGGCCTTTTCCCCTGCCAGCAGCAAGGTGGACTTGGTAGAGGCTGCTGAGGCCCACGCTCAGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ACACACGTTTGCGATTGCCAGCCAATAGAAACACTTGGATCGCCTTaGTGGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTGGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: THVCDCQPIETLGSP*WLPSRLVGAAVGRP
Trigger: AGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp AGGAGGCAAAGAACTGCCACGGCTGATAAGTGTGACCGAAGTCTGTaGACCGCTCCAGCACCCAGAGGTCAGGCCGAGGTGAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: RRQRTATADKCDRSL*TAPAPRGQAEVSWQ
Trigger: TTGCCAACTCACCTCGGCCTGACCTCTGGGTGCTGGAGCGGTCCACAGACTTCGGTCACACTTATCAGCCGTGGCAGTTCTTTGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CAGACACACCGTCCCAACCTTGGGTCCTTCCGGCAGGCATTGCCCTaGGTCCCTGCAGCATTGCAATCACAGTTCACGATTTGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QTHRPNLGSFRQALP*VPAALQSQFTICPA
Trigger: CGCTGGACAAATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CAACGTTGTCCAGTCACGCCTGCTTTGCACAGGCAGCGTCCACTCTaGGGATCACAGGTTTCTGTCCCACATGGGGAACAGTCACACCGG +
Preference number: 5 (lower is better)
Translates to: QRCPVTPALHRQRPL*GSQVSVPHGEQSHR
Trigger: CCGGTGTGACTGTTCCCCATGTGGGACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CGTGAGCAATCTTCTCACTGGTCTCGCTCGTGTCCATGGCCAGCATaGCTTGTGCCTCCTGGATCTGGGCTGCTAGCTGGTTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: REQSSHWSRSCPWPA*LVPPGSGLLAGSSW
Trigger: CCAGGAAGAACCAGCTAGCAGCCCAGATCCAGGAGGCACAAGCCATGCTGGCCATGGACACGAGCGAGACCAGTGAGAAGATTGCTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GACGGCTCAGTTTGGCCAGCAGCTGTGGCAATGTCTTCTCCAGGGTaGACACTGAACTGCTTGCATCCCGTTCCACCTGGCTCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: DGSVWPAAVAMSSPG*TLNCLHPVPPGSGP
Trigger: AGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACATTGCCACAGCTGCTGGCCAAACTGAGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CACGTTTGCGATTGCCAGCCAATAGAAACACTTGGATCGCCTTGCTaGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTGGGTCGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: HVCDCQPIETLGSPC*LPSRLVGAAVGRPS
Trigger: AGAAGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GCTCCTCTTGGAGGTAACTGGAGCTGTAAGCATCCTCAGGGACAATaGGTACGTAGTCCAGCCAGAGCCACCGGCCTTCTGGCACACGCA +
Preference number: 5 (lower is better)
Translates to: APLGGNWSCKHPQGQ*VRSPARATGLLAHA
Trigger: TGCGTGTGCCAGAAGGCCGGTGGCTCTGGCTGGACTACGTACTCATTGTCCCTGAGGATGCTTACAGCTCCAGTTACCTCCAAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp TTTGGTTGCCCTGCAGCACGACGTCCGGCCGGCTCTCGTAGGGAATaGAGATATCACCTCGCTGGGTCTCTGAGTGCAGCTCATAGTGGA +
Preference number: 5 (lower is better)
Translates to: FGCPAARRPAGSRRE*RYHLAGSLSAAHSG
Trigger: TCCACTATGAGCTGCACTCAGAGACCCAGCGAGGTGATATCTTCATTCCCTACGAGAGCCGGCCGGACGTCGTGCTGCAGGGCAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GCCTGGTTCAGGGCCTCACGAAGATCCATGAGGCCAGACTCATACTaGGCCAGCTGGTCCCGAATGTGTGTGGCCAATGACTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AWFRASRRSMRPDSY*ASWSRMCVANDWFS
Trigger: GGAGAACCAGTCATTGGCCACACACATTCGGGACCAGCTGGCTCAGTATGAGTCTGGCCTCATGGATCTTCGTGAGGCCCTGAACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CATAATCCAGGCCAAAGAAGCCATCCTTGCAGGCTGCACAGGTCTTaGCACACACGTGAGCCTTGCAGAAGCACTGCCCATTGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HNPGQRSHPCRLHRS*HTREPCRSTAHCPG
Trigger: GCCAGGGCAATGGGCAGTGCTTCTGCAAGGCTCACGTGTGTGGCAAGACCTGTGCAGCCTGCAAGGATGGCTTCTTTGGCCTGGATTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ACAAAGGCAGGCTCAGTGCTGGGTGGGAAAGCCACTGGCTGGCTCTaGTCTGTGCAGTTGGTACAGCTGGAAAGCTTGCCCTCTTCACGA +
Preference number: 5 (lower is better)
Translates to: TKAGSVLGGKATGWL*SVQLVQLESLPSSR
Trigger: TCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCCAGCACTGAGCCTGCCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GATTACGCAGAGACACTCCCATGTAGTCCCCAGTGGCCTGGCGGCTaGCCATGTACAGAACAAAGTGGTCCCCCGTGTTCTTGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: DYAETLPCSPQWPGG*PCTEQSGPPCSCQV
Trigger: AACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTACATGGGCAGCCGCCAGGCCACTGGGGACTACATGGGAGTGTCTCTGCGTAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGGCAGCTGTACAGATGTCACAGTACTGGCCCTGGATTGTCTGATTaGGATCTCCGCCAGCCACCGGACCCCCAACCAGCTTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: WQLYRCHSTGPGLSD*DLRQPPDPQPACSR
Trigger: TCTACTGCAAGCTGGTTGGGGGTCCGGTGGCTGGCGGAGATCCCAATCAGACAATCCAGGGCCAGTACTGTGACATCTGTACAGCTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CTCAGGGACAATGAGTACGTAGTCCAGCCAGAGCCACCGGCCTTCTaGCACACGCACAGTCACGGTGAGCTCGTTGTCTGTAACATCCAG +
Preference number: 5 (lower is better)
Translates to: LRDNEYVVQPEPPAF*HTHSHGELVVCNIQ
Trigger: CTGGATGTTACAGACAACGAGCTCACCGTGACTGTGCGTGTGCCAGAAGGCCGGTGGCTCTGGCTGGACTACGTACTCATTGTCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GCACAGGCAGCGTCCACTCTGGGGATCACAGGTTTCTGTCCCACATaGGGAACAGTCACACCGGGTGCAGTTGCCTGGCAACAAAGCATT +
Preference number: 5 (lower is better)
Translates to: AQAASTLGITGFCPT*GTVTPGAVAWQQSI
Trigger: AATGCTTTGTTGCCAGGCAACTGCACCCGGTGTGACTGTTCCCCATGTGGGACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CGGAAGAAGCCAGGCAGACAACGCTCACAGTTGATACCCGTAGTGTaGTGCTGGCAATCCAGGCAGACACCTCCACCCTGGTACACGTTG +
Preference number: 5 (lower is better)
Translates to: RKKPGRQRSQLIPVV*CWQSRQTPPPWYTL
Trigger: CAACGTGTACCAGGGTGGAGGTGTCTGCCTGGATTGCCAGCATCACACTACGGGTATCAACTGTGAGCGTTGTCTGCCTGGCTTCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CCAAAGAAGCCATCCTTGCAGGCTGCACAGGTCTTGCCACACACGTaGGCCTTGCAGAAGCACTGCCCATTGCCCTGGCACTCAGTAACT +
Preference number: 5 (lower is better)
Translates to: PKKPSLQAAQVLPHT*ALQKHCPLPWHSVT
Trigger: AGTTACTGAGTGCCAGGGCAATGGGCAGTGCTTCTGCAAGGCTCACGTGTGTGGCAAGACCTGTGCAGCCTGCAAGGATGGCTTCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GGGGGCTCTCTGAGGGGTGTGCACAGCCACTCCCATCTCTTGGTGTaGATCCTCACCGACATATTCCACCACGAGAACATATTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGSLRGVHSHSHLLV*ILTDIFHHENILAR
Trigger: CCTGGCCAATATGTTCTCGTGGTGGAATATGTCGGTGAGGATTCACACCAAGAGATGGGAGTGGCTGTGCACACCCCTCAGAGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp AGTAGTCCCTCGCTCCCAGGGGCCACCGTGTCTCCCTTGATCTCATaGACCATCTGTTTCTCCACGGTGACAGACATGTGGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: SSPSLPGATVSPLIS*TICFSTVTDMWPNW
Trigger: CCAGTTTGGCCACATGTCTGTCACCGTGGAGAAACAGATGGTTCATGAGATCAAGGGAGACACGGTGGCCCCTGGGAGCGAGGGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp ATCCTTCCAAACAGCGGTCACAACGTTGTCCAGTCACGCCTGCTTTaGACAGGCAGCGTCCACTCTGGGGATCACAGGTTTCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ILPNSGHNVVQSRLL*TGSVHSGDHRFLSH
Trigger: GTGGGACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTTTGGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GAAGCGGTCCTGATTGATGCCAAGGATGATGCCAGACAGGTTGATTaGCAGCTGGTTCAGCTTCTGAGCGTGGGCCTCAGCAGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: EAVLIDAKDDARQVD*QLVQLLSVGLSSLY
Trigger: GTAGAGGCTGCTGAGGCCCACGCTCAGAAGCTGAACCAGCTGGCAATCAACCTGTCTGGCATCATCCTTGGCATCAATCAGGACCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp GTGGGAAAGCCACTGGCTGGCTCTGCTCTGTGCAGTTGGTACAGCTaGAAAGCTTGCCCTCTTCACGAACAGAGATCTGCCCATTCACGC +
Preference number: 5 (lower is better)
Translates to: VGKPLAGSALCSWYS*KACPLHEQRSAHSR
Trigger: GCGTGAATGGGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TTGAACTTCATGGACACCTTGACCTTGCTGGCGGCACTCCGGGCTTaGGCAATGAGCTTGCGCACACGACCAATGTTGGCAGACAAAGCC +
Preference number: 5 (lower is better)
Translates to: LNFMDTLTLLAALRA*AMSLRTRPMLADKA
Trigger: GGCTTTGTCTGCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCATGAAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp GGCACTATTCGCGAGTATTCTGTGGTGCAGATGACGTCGTCGTCCTaGGTGATGCGCTCTAGAGTCCGAGGTCCAAACCGCTCCAAACAA +
Preference number: 5 (lower is better)
Translates to: GTIREYSVVQMTSSS*VMRSRVRGPNRSKQ
Trigger: TTGTTTGGAGCGGTTTGGACCTCGGACTCTAGAGCGCATCACGCAGGACGACGACGTCATCTGCACCACAGAATACTCGCGAATAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CCACTGGCTGGCTCTGCTCTGTGCAGTTGGTACAGCTGGAAAGCTTaGCCTCTTCACGAACAGAGATCTGCCCATTCACGCTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: PLAGSALCSWYSWKA*PLHEQRSAHSRWLI
Trigger: GATCAACCAGCGTGAATGGGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp AGGCCTCCGTTACTCGATGCTGTAGGAGAGCTGCCTCATAGTAGGTaGTGGGCAGTAGGACCACGTAGTCCAAGAGTACACCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RPPLLDAVGELPHSR*WAVGPRSPRVHLQP
Trigger: AGGCTGAAGGTGTACTCTTGGACTACGTGGTCCTACTGCCCAGCACCTACTATGAGGCAGCTCTCCTACAGCATCGAGTAACGGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CCTCCGTTACTCGATGCTGTAGGAGAGCTGCCTCATAGTAGGTGCTaGGCAGTAGGACCACGTAGTCCAAGAGTACACCTTCAGCCTCGA +
Preference number: 5 (lower is better)
Translates to: PPLLDAVGELPHSRC*AVGPRSPRVHLQPR
Trigger: TCGAGGCTGAAGGTGTACTCTTGGACTACGTGGTCCTACTGCCCAGCACCTACTATGAGGCAGCTCTCCTACAGCATCGAGTAACGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp AGTAGTAGGCATCAGCCATCTCCAGCATGTTATCCTGGTCTACGCTaGACACAGTGGCCCGCTCCACACGCACCAACACACGTTTGCGAT +
Preference number: 5 (lower is better)
Translates to: SSRHQPSPACYPGLR*TQWPAPHAPTHVCD
Trigger: ATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCACTGTGTTCAGCGTAGACCAGGATAACATGCTGGAGATGGCTGATGCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp TCCTCAGTGGCCGCTTATCCAGCTGTAATTTCTTCAGACAGCCGCTaGACCCCACAGACACAGGGAGCTTGGAACTGTAACTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SSVAAYPAVISSDSR*TPQTQGAWNCNCWQ
Trigger: CTGCCAGCAGTTACAGTTCCAAGCTCCCTGTGTCTGTGGGGTTCAGCGGCTGTCTGAAGAAATTACAGCTGGATAAGCGGCCACTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CATCGGTCACAAGAGCCTCCACATGTATTGTGCTGGCAGGCACACTaGAGCCTGAAAGGATCCAATGGGTCCTTGGCGTCACAGACATCT +
Preference number: 5 (lower is better)
Translates to: HRSQEPPHVLCWQAH*SLKGSNGSLASQTS
Trigger: AGATGTCTGTGACGCCAAGGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp TTGAAGCCTGGACAGCATCGGTCACAAGAGCCTCCACATGTATTGTaGTGGCAGGCACACTGCAGCCTGAAAGGATCCAATGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LKPGQHRSQEPPHVL*WQAHCSLKGSNGSL
Trigger: CAAGGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 90 bp CCATGGGTCACCGGTGGCCTTGGAGCGAGCACAAGGTTTATCTACTaGCGTGTCCAGCATGAAGGTCTGCTCAAAATTGTAGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PWVTGGLGASTRFIY*RVQHEGLLKIVEAD
Trigger: GTCAGCCTCTACAATTTTGAGCAGACCTTCATGCTGGACACGGCAGTAGATAAACCTTGTGCTCGCTCCAAGGCCACCGGTGACCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp TGCGCTCTAGAGTCCGAGGTCCAAACCGCTCCAAACAATCCCTCTTaGAGGAGGCAAAGAACTGCCACGGCTGATAAGTGTGACCGAAGT +
Preference number: 5 (lower is better)
Translates to: CALESEVQTAPNNPS*RRQRTATADKCDRS
Trigger: ACTTCGGTCACACTTATCAGCCGTGGCAGTTCTTTGCCTCCTCCAAGAGGGATTGTTTGGAGCGGTTTGGACCTCGGACTCTAGAGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp ACATGTATTGTGCTGGCAGGCACACTGCAGCCTGAAAGGATCCAATaGGTCCTTGGCGTCACAGACATCTGCGTGGCCATGACAGACACA +
Preference number: 5 (lower is better)
Translates to: TCIVLAGTLQPERIQ*VLGVTDICVAMTDT
Trigger: TGTGTCTGTCATGGCCACGCAGATGTCTGTGACGCCAAGGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 90 bp CGAAGTCGCTGTACAAAAACATTGCTGATGCAGCCACTGAAGTTGTaGAAGGTACCAGACACAGGCAGGCCTCCCAGGAGAAGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RSRCTKTLLMQPLKL*KVPDTGRPPRRSRE
Trigger: CTCACGGCTTCTCCTGGGAGGCCTGCCTGTGTCTGGTACCTTCCACAACTTCAGTGGCTGCATCAGCAATGTTTTTGTACAGCGACTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp CTTCACGAACAGAGATCTGCCCATTCACGCTGGTTGATCCACGGTTaGCATATCGGAAAACCAGCCGAAAGAGGTCAGGGGAGGTCACGT +
Preference number: 5 (lower is better)
Translates to: LHEQRSAHSRWLIHG*HIGKPAERGQGRSR
Trigger: ACGTGACCTCCCCTGACCTCTTTCGGCTGGTTTTCCGATATGTCAACCGTGGATCAACCAGCGTGAATGGGCAGATCTCTGTTCGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGGTCCCGCAGCGCCTaGCCCATGAGGTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGSRSA*PMRWPS
Trigger: ACTGGGCCACCTCATGGGCAAGGCGCTGCGGGACCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCACACCGTCCCAACCTaGGGTCCTTCCGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTHTVPT*GPSGRH
Trigger: ATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGTG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGGCCGGGGCAGGCTGTaGTCATGGCGACACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQGRGRL*SWRHRA
Trigger: GGCCCTGTGTCGCCATGACAACAGCCTGCCCCGGCC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGGGCAGGGGTGGAGGTaGAGCACCCCTTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICGQGWR*STPCWG
Trigger: CCCCCAGCAAGGGGTGCTCAACCTCCACCCCTGCCC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCCATGGCCCCCAGGCTaGCCCGGTACAGGCACCTGG +
Preference number: 5 (lower is better)
Translates to: VVGQEEQSINIISVLQSPPWPPG*PGTGTW
Trigger: CCAGGTGCCTGTACCGGGCAAGCCTGGGGGCCATGG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCGAGCAGTTGAAGACTaGGGCAGGCTCCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTRAVED*GRLPRC
Trigger: GCACCTCGGGAGCCTGCCCAAGTCTTCAACTGCTCG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp GAGGGTTCCTCGGGCTGTAGTTGGAGCATGGGAGTTGTTCTCTCATaGGACTTTACTAGTTGTAGCTGGTCATCCACATACAGCCATACC +
Preference number: 5 (lower is better)
Translates to: EGSSGCSWSMGVVLS*DFTSCSWSSTYSHT
Trigger: GGTATGGCTGTATGTGGATGACCAGCTACAACTAGTAAAGTCTCATGAGAGAACAACTCCCATGCTCCAACTACAGCCCGAGGAACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGTGCAGCCTTCAGGGTaGCTGGCGCTCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICVQPSG*LALSPQ
Trigger: CTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCAC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCACCACGAGAACATATaGGCCAGGCTGAGGCACGGC +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTHHENI*ARLRHG
Trigger: GCCGTGCCTCAGCCTGGCCAATATGTTCTCGTGGTG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCCTCCTTGCAATGGCATaGGCCTGTGAGGGGGTCACA +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTLLAMA*ACEGVT
Trigger: TGTGACCCCCTCACAGGCCAATGCCATTGCAAGGAG...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTGGCACTCGGAGCCCTaGGCAGCTGGTCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQWHSEP*AAGPQA
Trigger: TGCCTGTGGACCAGCTGCCAAGGGCTCCGAGTGCCA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACTGGCCTGCCTGACCTaGGACCCCTGTGGCCTGACT +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINILACLT*DPCGLT
Trigger: AGTCAGGCCACAGGGGTCCAAGGTCAGGCAGGCCAG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTCCCCCACCATTTGCGTaGGGGTCCTCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VVGQEEQSINIISVLQSPPPPFA*GSSVAA
Trigger: AGCGGCCACTGAGGACCCCAACGCAAATGGTGGGGG...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGGGGGAGACACTGGGCTaGGCCTGCCTCTGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQGETLG*ACLWVS
Trigger: ACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTCCCC...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATGGTTCTGGCTGGCATaGCGCCGATCCACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIIWFWLA*RRSTSG
Trigger: CCCTGAGGTGGATCGGCGCAATGCCAGCCAGAACCA...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCATACACAGTTCCACATaGCTGGCTGGAGGCCCCCTA +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTIHSST*LAGGPL
Trigger: TAGGGGGCCTCCAGCCAGCAATGTGGAACTGTGTAT...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCCAGTCACGCCTGCTTaGCACAGGCAGCGTCCACTC +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICPVTPA*HRQRPL
Trigger: GAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp AGAAATGACTTGTTATTCATAGAAAGTGTAGGCAAACCCCAAGGTCTGGGAACCTTCAGCCGTTCCTGGTaGCGGCTGTTGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RNDLLFIESVGKPQGLGTFSRSW*RLLSSS
Trigger: TGAGGAACTCAACAGCCGCAACCAGGAACGGCTGAA...GGTTCCCAGACCTTGGGGTTTGCCTACACTTTCTATGAATAACAAGTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCATGGCCAGCATGGCTaGTGCCTCCTGGATCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICHGQHG*CLLDLG
Trigger: GCCCAGATCCAGGAGGCACAAGCCATGCTGGCCATG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAATGGACACCTTGACCTaGCTGGCGGCACTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKMDTLT*LAALRA
Trigger: AGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCAT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTTCCACGGCTGCTGGTaGAAGCCTGGACAGCATCGG +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQFHGCW*KPGQHR
Trigger: CCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACCCCGGAAGTTGGGTTaGCAGACACACCGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINIPRKLG*QTHRPN
Trigger: GTTGGGACGGTGTGTCTGCAAACCCAACTTCCGGGG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATGGGTCACAGAGGCTGTaGGCTACCCCAGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYGSQRL*ATPGLE
Trigger: TTCCAGCCCTGGGGTAGCCAACAGCCTCTGTGACCC...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTACAGCGATCACAGCTaGGCCCTTCCACGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQYSDHS*ALPREP
Trigger: GGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGTA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTTGTGACCCCCACCATTaGCGTTGGGGTCCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: VVGQEEQSINIISVLQSPCDPHH*RWGPQW
Trigger: CCACTGAGGACCCCAACGCAAATGGTGGGGGTCACA...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCCCCTGCCCCATCATTaGCCTGCAGCAGGACCTGTT +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQPLPHH*PAAGPV
Trigger: AACAGGTCCTGCTGCAGGCAAATGATGGGGCAGGGG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACGGCCTGTGGTGTGGTaGCTCTGTGTGTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINIRPVVW*LCVSTS
Trigger: GGAGGTAGACACACAGAGCAACCACACCACAGGCCG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 90 bp ACTTTACTAGTTGTAGCTGGTCATCCACATACAGCCATACCCCTGTaGCATTGCTATAGAAGGCAACATAGTGAGGAGCACCATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TLLVVAGHPHTAIPL*HCYRRQHSEEHHQQ
Trigger: TTGCTGATGGTGCTCCTCACTATGTTGCCTTCTATAGCAATGTCACAGGGGTATGGCTGTATGTGGATGACCAGCTACAACTAGTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGTGCCATCGATGGCGTaGCTCACAGGGTGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMVPSMA*LTGCAL
Trigger: CAAGGCACACCCTGTGAGCAACGCCATCGATGGCAC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGTGACGTTGACCTCATaGTACTCCAGGCCACGGGAC +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINIVTLTS*YSRPRD
Trigger: GTCCCGTGGCCTGGAGTACAATGAGGTCAACGTCAC...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTCGTCAGGATGCAGGTaGAGTAGTCCCTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQSSGCR*SSPSLP
Trigger: TGGGAGCGAGGGACTACTCAACCTGCATCCTGACGA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAGTACTGGCCCTGGATaGTCTGATTGGGATCTCCGC +
Preference number: 5 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSTGPG*SDWDLR
Trigger: GCGGAGATCCCAATCAGACAATCCAGGGCCAGTACT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAACAGGGTGTGCCTTGTaGCTGTTGGCAGCTGTACAG +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKTGCAL*LLAAVQ
Trigger: CTGTACAGCTGCCAACAGCAACAAGGCACACCCTGT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATACTCACAGGGTGTGCCTaGTTGCTGTTGGCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINILTGCA*LLLAAV
Trigger: TACAGCTGCCAACAGCAACAAGGCACACCCTGTGAG...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCTTTGGTTCACAGCCTaGACCCAGGGCACCACCAAC +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYLWFTA*TQGTTN
Trigger: GTTGGTGGTGCCCTGGGTCAAGGCTGTGAACCAAAG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATCAAACTCCAGGGGGTaGAAGCCAAAGCGTACAGCG +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKSNSRG*KPKRTA
Trigger: CGCTGTACGCTTTGGCTTCAACCCCCTGGAGTTTGA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATGACACTGGTCACATCTaGAGCCCTGCACGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYDTGHI*SPARSP
Trigger: AGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGTC...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGACAGCGGTCACAACGTaGTCCAGTCACGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQTAVTT*SSHACF
Trigger: AAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGGCGGCAGCCCTGGCATaGCTCAAAACCGAAGTATCC +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMAAALA*LKTEVS
Trigger: GGATACTTCGGTTTTGAGCAATGCCAGGGCTGCCGC...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCAGTTCCTGTTTCCATaGCAGGGCTTCCTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQQFLFP*QGFLQP
Trigger: CGGCTGAAGGAAGCCCTGCAATGGAAACAGGAACTG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTGATGAGACTGGCAGCTaGAAGAGTGGCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VVGQEEQSINIISVLQSPDETGS*KSGLQG
Trigger: ACCCTGAAGGCCACTCTTCAAGCTGCCAGTCTCATC...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATCTACCAAGTCCACCTaGCTGCTGGCAGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKSTKST*LLAGEK
Trigger: CTTTTCCCCTGCCAGCAGCAAGGTGGACTTGGTAGA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGTGGACACTGAACTGCTaGCATCCCGTTCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMWTLNC*HPVPPG
Trigger: GCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCA...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCGCACACGACCAATGTaGGCAGACAAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYRTRPM*ADKARL
Trigger: CAGCCTGGCTTTGTCTGCCAACATTGGTCGTGTGCG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGCTTGGGCAATGAGCTaGCGCACACGACCAATGTTG +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIIAWAMS*RTRPML
Trigger: CAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGTTGACAGGGGCCCCATaGATCAGCAGCTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQLTGAP*ISSFLK
Trigger: CTTGAGGAAGCTGCTGATCAATGGGGCCCCTGTCAA...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAGGTCCAGTGTGACGTaGACCTCATTGTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKRSSVT*TSLYSR
Trigger: CCTGGAGTACAATGAGGTCAACGTCACACTGGACCT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAACCGCAAGCGGATGTaGGTGGCTTTGGTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYNRKRM*VALVKS
Trigger: AGACTTCACCAAAGCCACCAACATCCGCTTGCGGTT...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCCAAAGAAGCCATCCTaGCAGGCTGCACAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMPKKPS*QAAQVL
Trigger: CAAGACCTGTGCAGCCTGCAAGGATGGCTTCTTTGG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGCTCTGCTCTGTGCAGTaGGTACAGCTGGAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQLCSVQ*VQLESL
Trigger: CAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAG...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTGTCCAAAGGCTCCTCTaGGAGGTAACTGGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICVQRLL*EVTGAV
Trigger: TACAGCTCCAGTTACCTCCAAGAGGAGCCTTTGGAC...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCCTACAGCGCTCACATaGGTCCCCTTCTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYPTALT*VPFCVV
Trigger: CACAACACAGAAGGGGACCAATGTGAGCGCTGTAGG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGAACTTCATGGACACCTaGACCTTGCTGGCGGCACTC +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMNFMDT*TLLAAL
Trigger: GAGTGCCGCCAGCAAGGTCAAGGTGTCCATGAAGTT...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAACCCCTGAACGCCCATaGAACTTCATGGACACCTTG +
Preference number: 5 (lower is better)
Translates to: FQISVLTVVGQEEQSINITPERP*NFMDTL
Trigger: CAAGGTGTCCATGAAGTTCAATGGGCGTTCAGGGGT...TATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATCTCTGGATGTGGAACTaGAGGGCAGTGTACGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYLWMWN*RAVYAA
Trigger: TGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAG...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATTGAGGTCCACGTACTaGCCCAGAGCCTTAATACCC +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKLRSTY*PRALIP
Trigger: GGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAA...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATACAGCCTACGCTTACATaGACACTCCCCATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIIQPTLT*TLPMFW
Trigger: CCAGAACATGGGGAGTGTCAATGTAAGCGTAGGCTG...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTGCCTTTCCCTGCTaGGAAAGTGCTAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQSAFPC*ESARVP
Trigger: AGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCACT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp GTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAGTCCTTGTGCCTTGTTGCTGTaGGCAGCTGTACAGATGTCA +
Preference number: 5 (lower is better)
Translates to: VVGQEEQSINIISVLQSPCALLL*AAVQMS
Trigger: TGACATCTGTACAGCTGCCAACAGCAACAAGGCACA...AGGACTCTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATTCAGGCCGAGGTGAGTaGGCAAACTTGATGAGCACA +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYSGRGE*ANLMST
Trigger: TGTGCTCATCAAGTTTGCCAACTCACCTCGGCCTGA...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCCAAACAATCCCTCTaGGAGGAGGCAAAGAACTGC +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIISKQSL*EEAKNC
Trigger: GCAGTTCTTTGCCTCCTCCAAGAGGGATTGTTTGGA...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTGGGTCCCTGCAGCATaGCAATCACAGTTCACGATT +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICWVPAA*QSQFTI
Trigger: AATCGTGAACTGTGATTGCAATGCTGCAGGGACCCA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCTGGTTGATCCACGGTaGACATATCGGAAAACCAGC +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICLVDPR*TYRKTS
Trigger: GCTGGTTTTCCGATATGTCAACCGTGGATCAACCAG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATTCACTGAAGATCATGTaGGGGTCTCCATTACCGCTG +
Preference number: 5 (lower is better)
Translates to: ISDLSTDSCWAGGTKYKYSLKIM*GSPLPL
Trigger: CAGCGGTAATGGAGACCCCAACATGATCTTCAGTGA...ATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATATGATGCCAGACAGGTaGATTGCCAGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYMMPDR*IASWFS
Trigger: GCTGAACCAGCTGGCAATCAACCTGTCTGGCATCAT...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTATGCAGCCACTGAAGTaGTGGAAGGTACCAGACACA +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICMQPLK*WKVPDT
Trigger: TGTGTCTGGTACCTTCCACAACTTCAGTGGCTGCAT...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp ATATCTGTTCTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGCGGATGTTGGTGGCTTaGGTGAAGTCTCGAAGTAAC +
Preference number: 5 (lower is better)
Translates to: ISVLQSPFPLKRQCKPEMRMLVA*VKSRSN
Trigger: GTTACTTCGAGACTTCACCAAAGCCACCAACATCCG...CATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAGAACAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTACAGAGTCCTTTTCCTCTAAAAAGACAGTGTAAACCAGAAATGACTTGTTATTGTTCTCTCGTGTCATaGTGGGGAAATGAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LQSPFPLKRQCKPEMTCYCSLVS*WGNEGR
Trigger: TCTGCCTTCATTTCCCCACAATGACACGAGAGAACA...ATAACAAGTCATTTCTGGTTTACACTGTCTTTTTAGAGGAAAAGGACTCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp TTAATTTCAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAAAACTGGCTCTCTTGCTaGAGGAAAAAGATGATCCCA +
Preference number: 5 (lower is better)
Translates to: LISDLSTDSCWAGGTKYKNWLSC*RKKMIP
Trigger: TGGGATCATCTTTTTCCTCAAGCAAGAGAGCCAGTT...TTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTGAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCTACAGAACACACGTTTGCGATaGCCAGCCAATAGAAACACT +
Preference number: 5 (lower is better)
Translates to: LTVVGQEEQSINIISVLQNTRLR*PANRNT
Trigger: AGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTT...CTGTAGAACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAATCAGCAAAGACCCTTaGAGTTTCCACCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIIISKDP*SFHLLV
Trigger: AACCAAGAGGTGGAAACTCAAAGGGTCTTTGCTGAT...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CAGATCTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATAGTTGGAGCATGGGAGTaGTTCTCTCATGAGACTTTA +
Preference number: 5 (lower is better)
Translates to: QISVLTVVGQEEQSINIIVGAWE*FSHETL
Trigger: TAAAGTCTCATGAGAGAACAACTCCCATGCTCCAAC...TATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAGATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTCAAAGCGTTTTGTGTaGCTGAACTGCTTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICSKRFV*LNCFSK
Trigger: CTTTGAGAAGCAGTTCAGCAACACAAAACGCTTTGA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTCAAGAACTGGCTCTCTaGCTTGAGGAAAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICQELAL*LEEKDD
Trigger: ATCATCTTTTTCCTCAAGCAAGAGAGCCAGTTCTTG...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS-3UTR CAA 90 bp CTCAGTACTGACAGTTGTTGGGCAGGAGGAACAAAGTATAAATATAATATCTGTTTGAGTTTCCACCTCTaGGTTCATAAAACGGAGTGT +
Preference number: 5 (lower is better)
Translates to: LSTDSCWAGGTKYKYNICLSFHL*VHKTEC
Trigger: ACACTCCGTTTTATGAACCAAGAGGTGGAAACTCAA...ACAGATATTATATTTATACTTTGTTCCTCCTGCCCAACAACTGTCAGTACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CCAGCGGACGGACACCCTGTGCCACTGGCCAGCCCGTaGGTGCTGGCGACTCTGGACCTGGAGCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PADGHPVPLASP*VLATLDLEPGP
Trigger: GGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CGGACGGACACCCTGTGCCACTGGCCAGCCCGTGAGTaGTGGCGACTCTGGACCTGGAGCCGGGGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: RTDTLCHWPARE*WRLWTWSRGPG
Trigger: CCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCTTGCAGTAGAGGTCCTCGGTGGGGCGTGAGACACTaGGCGTCGGGGCCTCCTCGCCGCAGGTCGCGGACG +
Preference number: 6 (lower is better)
Translates to: ACSRGPRWGVRH*ASGPPRRRSRT
Trigger: CGTCCGCGACCTGCGGCGAGGAGGCCCCGACGCGCAGTGTCTCACGCCCCACCGAGGACCTCTACTGCAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCCGGCAGGGACACTGGCCCCCGAAGGGCTCGCACGTaGGGCTTACGGCACCCACCTCGTGGCAGCCACAAG +
Preference number: 6 (lower is better)
Translates to: PGRDTGPRRART*GLRHPPRGSHK
Trigger: CTTGTGGCTGCCACGAGGTGGGTGCCGTAAGCCCCACGTGCGAGCCCTTCGGGGGCCAGTGTCCCTGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CCTGGGGCACAGCGTTCACAGTGGGGCCCAGTGGTGTaGCGGAGGCAGCCTCGACAGGCACCCGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: PGAQRSQWGPVV*RRQPRQAPVRG
Trigger: CCCCCTGACGGGTGCCTGTCGAGGCTGCCTCCGTCACACCACTGGGCCCCACTGTGAACGCTGTGCCCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCCCAGGCCGCGGAGCTGGCATTGATACCCTGCAGCTaGTCACGGATAGCGGGGAGGAGGGCACCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: AQAAELALIPCS*SRIAGRRAPAR
Trigger: GCGGGCTGGTGCCCTCCTCCCCGCTATCCGTGAGCAGCTGCAGGGTATCAATGCCAGCTCCGCGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCGGTGGCACAGCGGGAACAGTCACGGCCAATAACGTaGCCCCGGCAGGGACACTGGCCCCCGAAGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PVAQREQSRPIT*PRQGHWPPKGS
Trigger: CGAGCCCTTCGGGGGCCAGTGTCCCTGCCGGGGCCACGTTATTGGCCGTGACTGTTCCCGCTGTGCCACCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CACTGGCCAGCCCGTGAGTGCTGGCGACTCTGGACCTaGAGCCGGGGCCCAGGGCCCTCAGTCTGTGCGACA +
Preference number: 6 (lower is better)
Translates to: HWPARECWRLWT*SRGPGPSVCAT
Trigger: TGTCGCACAGACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTGTGCCACTGGCCAGCCCGTGAGTGCTGGCGACTCTaGACCTGGAGCCGGGGCCCAGGGCCCTCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: LCHWPARECWRL*TWSRGPGPSVC
Trigger: ACAGACTGAGGGCCCTGGGCCCCGGCTCCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CCCAACCAGCTTGCAGTAGAGGTCCTCGGTGGGGCGTaGGACACTGCGCGTCGGGGCCTCCTCGCCGCAGGT +
Preference number: 6 (lower is better)
Translates to: PNQLAVEVLGGA*DTARRGLLAAG
Trigger: ACCTGCGGCGAGGAGGCCCCGACGCGCAGTGTCTCACGCCCCACCGAGGACCTCTACTGCAAGCTGGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCTAACAGCTGCCGGGCTCCAGCTGCTAGGCCCCGCTaGACCACCATCTCCCATGTGCGGCTGGCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: ANSCRAPAARPR*TTISHVRLACL
Trigger: GAGGCAGGCCAGCCGCACATGGGAGATGGTGGTGCAGCGGGGCCTAGCAGCTGGAGCCCGGCAGCTGTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CACCCAGGGTGCCTCGTGGGTCACAGCTGCAGCGTGTaGAGCCTTCAGGGTTGCTGGCGCTCAGCCCCCAGT +
Preference number: 6 (lower is better)
Translates to: HPGCLVGHSCSV*SLQGCWRSAPS
Trigger: ACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACCCACGAGGCACCCTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CACCGTGCCCTGGGGGTGGCGCAGCAAGGTGGGTTCTaGATTAGGATCCACCGCAGTTGGCGGCCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: HRALGVAQQGGF*IRIHRSWRPRL
Trigger: CAGCCTCGGCCGCCAACTGCGGTGGATCCTAATGCAGAACCCACCTTGCTGCGCCACCCCCAGGGCACGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGGGGCGCACTCGAGGCACTGGGGTCCTGTGGTCCCTaGCTGGCAGTGACACTGACCGCTCTGAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: RGALEALGSCGP*LAVTLTALRVA
Trigger: TGCCACCCTCAGAGCGGTCAGTGTCACTGCCAGCCAGGGACCACAGGACCCCAGTGCCTCGAGTGCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ATGCCATGGCCCCCAGGCTTGCCCGGTACAGGCACCTaGTGCTGCTGGCTGCAGGTGTCACAGCGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: MPWPPGLPGTGT*CCWLQVSQRSP
Trigger: CGGGGAACGCTGTGACACCTGCAGCCAGCAGCACCAGGTGCCTGTACCGGGCAAGCCTGGGGGCCATGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTGGTCAGCTGCTCCTGGACACGAGCCATCAGCCTCTaGGCTTCGGCCAGTTCGGCCTCTGCCACTGCCCCC +
Preference number: 6 (lower is better)
Translates to: LVSCSWTRAISL*ASASSASATAP
Trigger: GGGGGCAGTGGCAGAGGCCGAACTGGCCGAAGCCCAGAGGCTGATGGCTCGTGTCCAGGAGCAGCTGACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TGCTGCATTCCCCAGCGGACGGACACCCTGTGCCACTaGCCAGCCCGTGAGTGCTGGCGACTCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: CCIPQRTDTLCH*PARECWRLWTW
Trigger: CCAGGTCCAGAGTCGCCAGCACTCACGGGCTGGCCAGTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CACGGGACAGGGGTGGGCTCTGCCACCAGCGCTCCGTaGCATCGATGGCGTTGCTCACAGGGTGTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: HGTGVGSATSAP*HRWRCSQGVPC
Trigger: ACAAGGCACACCCTGTGAGCAACGCCATCGATGGCACGGAGCGCTGGTGGCAGAGCCCACCCCTGTCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCTCGTCACACAGGCGGGCTCCACAGTCACAGGGCCTaGAGTTGGGGAAACCCCAGTAGCCGGTGGCACAGC +
Preference number: 6 (lower is better)
Translates to: ARHTGGLHSHRA*SWGNPSSRWHS
Trigger: GCTGTGCCACCGGCTACTGGGGTTTCCCCAACTGCAGGCCCTGTGACTGTGGAGCCCGCCTGTGTGACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGCCAGGCGGAGGGTACGCCAGTTCCAGGAAGGCGATaGTCATTTGGTTGCCCTGCAGCACGACGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: GQAEGTPVPGRR*SFGCPAARRPA
Trigger: GGCCGGACGTCGTGCTGCAGGGCAACCAAATGAGCATCGCCTTCCTGGAACTGGCGTACCCTCCGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGAAGCCTGGGGCACAGCGTTCACAGTGGGGCCCAGTaGTGTGACGGAGGCAGCCTCGACAGGCACCCGTCA +
Preference number: 6 (lower is better)
Translates to: RSLGHSVHSGAQ*CDGGSLDRHPS
Trigger: TGACGGGTGCCTGTCGAGGCTGCCTCCGTCACACCACTGGGCCCCACTGTGAACGCTGTGCCCCAGGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGTAGCCAGGGGCGCACTCGAGGCACTGGGGTCCTGTaGTCCCTGGCTGGCAGTGACACTGACCGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSQGRTRGTGVL*SLAGSDTDRSE
Trigger: CTCAGAGCGGTCAGTGTCACTGCCAGCCAGGGACCACAGGACCCCAGTGCCTCGAGTGCGCCCCTGGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTGGTTaGAGCCTGGACAGCATCGGTCACAAGAGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RCPWWRASTAAG*SLDSIGHKSLH
Trigger: GTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp ACAGGTAGGGTCCGTCAGCTCCTGGACGCCGGGCCCTaGGCAGTTACACTCCTCACAGCCCACCAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: TGRVRQLLDAGP*AVTLLTAHQGV
Trigger: CACCCCTTGGTGGGCTGTGAGGAGTGTAACTGCTCAGGGCCCGGCGTCCAGGAGCTGACGGACCCTACCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CAGGTCTGGCTGCCGTCCACCACAAGCTGGATCTGCTaGATTCCCCAGCGGACGGACACCCTGTGCCACTGG +
Preference number: 6 (lower is better)
Translates to: QVWLPSTTSWIC*IPQRTDTLCHW
Trigger: CCAGTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAGCAGATCCAGCTTGTGGTGGACGGCAGCCAGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CTCCAGGTCTGGCTGCCGTCCACCACAAGCTGGATCTaGTGCATTCCCCAGCGGACGGACACCCTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: LQVWLPSTTSWI*CIPQRTDTLCH
Trigger: GTGGCACAGGGTGTCCGTCCGCTGGGGAATGCAGCAGATCCAGCTTGTGGTGGACGGCAGCCAGACCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGCACCTGGGTGGTGAAGACCACCGTGCCCTGGGGGTaGCGCAGCAAGGTGGGTTCTGCATTAGGATCCACC +
Preference number: 6 (lower is better)
Translates to: GTWVVKTTVPWG*RSKVGSALGST
Trigger: GGTGGATCCTAATGCAGAACCCACCTTGCTGCGCCACCCCCAGGGCACGGTGGTCTTCACCACCCAGGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGGGTGGGCACCTGGGTGGTGAAGACCACCGTGCCCTaGGGGTGGCGCAGCAAGGTGGGTTCTGCATTAGGA +
Preference number: 6 (lower is better)
Translates to: RVGTWVVKTTVP*GWRSKVGSALG
Trigger: TCCTAATGCAGAACCCACCTTGCTGCGCCACCCCCAGGGCACGGTGGTCTTCACCACCCAGGTGCCCACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCGGTGGGCTCCGGAGTTTACTCTGCAGGTCAGCAATaGAGGCATTCAGCCTGTGCAGCCTGGCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PVGSGVYSAGQQ*RHSACAAWPRP
Trigger: CGGCCTGGGCCAGGCTGCACAGGCTGAATGCCTCCATTGCTGACCTGCAGAGTAAACTCCGGAGCCCACCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCAGTGGCCTGGCGGCTGCCCATGTACAGAACAAAGTaGTCCCCCGTGTTCTTGCCAGGTTCGGGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PVAWRLPMYRTK*SPVFLPGSGAG
Trigger: GCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTACATGGGCAGCCGCCAGGCCACTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGCCAGGGGCAGGAAGCCGTGGCCGTGAAAAGTCATaGTGCGTCCCACTAGCAGGTCAGCGGTGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: VPGAGSRGREKS*CVPLAGQRCSR
Trigger: TCGGCTGCACCGCTGACCTGCTAGTGGGACGCACCATGACTTTTCACGGCCACGGCTTCCTGCCCCTGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTACAGAGAGGGTGTAGGGCTGTGGTCGCTCTGCCCTaGGGACCCGATGGTGGAGAGCCTTCTGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LQRGCRAVVALP*GPDGGEPSGSR
Trigger: CCTGGAGCCAGAAGGCTCTCCACCATCGGGTCCCCAGGGCAGAGCGACCACAGCCCTACACCCTCTCTGTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GCGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTGGTaGAAGCCTGGACAGCATCGGTCACAAGAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: ALSVVAGFHGCW*KPGQHRSQEPP
Trigger: TGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GCCACATGGAACACCTGGCCCAGGTCCAGTGTGACGTTGACCTCATaGTACTCCAGGCCACGGGACAGGGGTGGGCTCTGCCACCAGCGC +
Preference number: 6 (lower is better)
Translates to: ATWNTWPRSSVTLTS*YSRPRDRGGLCHQR
Trigger: GCGCTGGTGGCAGAGCCCACCCCTGTCCCGTGGCCTGGAGTACAATGAGGTCAACGTCACACTGGACCTGGGCCAGGTGTTCCATGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGGCACAGTGGTCACACCTGTCCCCCTCAAAGCCGGTaGGGCACATGCACTGGCCAGACTCTGGGTCACAGA +
Preference number: 6 (lower is better)
Translates to: GHSGHTCPPQSR*GTCTGQTLGHR
Trigger: TCTGTGACCCAGAGTCTGGCCAGTGCATGTGCCGCACCGGCTTTGAGGGGGACAGGTGTGACCACTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GTGGGTCACAGCTGCAGCGTGTGCAGCCTTCAGGGTTaGTGGCGCTCAGCCCCCAGTACCCAGGTTTACAGC +
Preference number: 6 (lower is better)
Translates to: VGHSCSVCSLQG*WRSAPSTQVYS
Trigger: GCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CAGGCCGATGCTCGTGGGGTACCACCTGCCGGTCACTaGTCAACAGCACCCAGCCCTCCATGTCCACGAACT +
Preference number: 6 (lower is better)
Translates to: QADARGVPPAGH*STAPSPPCPRT
Trigger: AGTTCGTGGACATGGAGGGCTGGGTGCTGTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CAAGGCATCGCCTGGAGATCCTTGGCCCATGCGAGATaGCAGCTCATTCAGGGCACGGCCCACAGCTCGCAC +
Preference number: 6 (lower is better)
Translates to: QGIAWRSLAHAR*QLIQGTAHSSH
Trigger: GTGCGAGCTGTGGGCCGTGCCCTGAATGAGCTGGCATCTCGCATGGGCCAAGGATCTCCAGGCGATGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp ATGCAGCCACGGACAGAGCCTCCGGAGGGGAAGAGCTaGCGTAGGCTCAAGGGCAGCTGTTCAGGTGGCACA +
Preference number: 6 (lower is better)
Translates to: MQPRTEPPEGKS*RRLKGSCSGGT
Trigger: TGTGCCACCTGAACAGCTGCCCTTGAGCCTACGGCAGCTCTTCCCCTCCGGAGGCTCTGTCCGTGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp ACCTCCTACAGAGAGGGTGTAGGGCTGTGGTCGCTCTaGCCTGGGGACCCGATGGTGGAGAGCCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: TSYREGVGLWSL*PGDPMVESLLA
Trigger: AGCCAGAAGGCTCTCCACCATCGGGTCCCCAGGGCAGAGCGACCACAGCCCTACACCCTCTCTGTAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGACTGTGGGGTCCCGCAGCGCCTTGCCCATGAGGTaGCCCAGTAGCGTGTTGGTTCGCAGAAACCGCAAG +
Preference number: 6 (lower is better)
Translates to: VTVGSRSALPMR*PSSVLVRRNRK
Trigger: CTTGCGGTTTCTGCGAACCAACACGCTACTGGGCCACCTCATGGGCAAGGCGCTGCGGGACCCCACAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TTGGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTGCTaGTTGAAGCCTGGACAGCATCGGTCACAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LALSVVAGFHGC*LKPGQHRSQEP
Trigger: AGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GAGGCTGTTGGCTACCCCAGGGCTGGAACACTGGCATaGGTGGCAGCTAGGCCCGTGGAATCCAGGAGCACA +
Preference number: 6 (lower is better)
Translates to: EAVGYPRAGTLA*VAARPVESRST
Trigger: TGTGCTCCTGGATTCCACGGGCCTAGCTGCCACCCATGCCAGTGTTCCAGCCCTGGGGTAGCCAACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CACCTGTCCCCCTCAAAGCCGGTGCGGCACATGCACTaGCCAGACTCTGGGTCACAGAGGCTGTTGGCTACC +
Preference number: 6 (lower is better)
Translates to: HLSPSKPVRHMH*PDSGSQRLLAT
Trigger: GGTAGCCAACAGCCTCTGTGACCCAGAGTCTGGCCAGTGCATGTGCCGCACCGGCTTTGAGGGGGACAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GCCAGCCTCGTCACAGCCTTCAGGCAAGGTCCCTGCTaGGCTGCAGCCACACAGCTGACAGAGAGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: ASLVTAFRQGPC*AAATQLTEREV
Trigger: CACTTCCCTCTCTGTCAGCTGTGTGGCTGCAGCCCAGCAGGGACCTTGCCTGAAGGCTGTGACGAGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGTCAGGGGGAACAGTGCGTGGTGGACAGATACACTaGCCCGTGAGCTCGTCACACAGGCGGGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: QSGGTVRGGQIH*PVSSSHRRAPQ
Trigger: CTGTGGAGCCCGCCTGTGTGACGAGCTCACGGGCCAGTGTATCTGTCCACCACGCACTGTTCCCCCTGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCGCTGTCCATGTCACAGGTAGGGTCCGTCAGCTCCTaGACGCCGGGCCCTGAGCAGTTACACTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: PLSMSQVGSVSS*TPGPEQLHSSQ
Trigger: CTGTGAGGAGTGTAACTGCTCAGGGCCCGGCGTCCAGGAGCTGACGGACCCTACCTGTGACATGGACAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGGGTGGACACTGAACTGCTTGCATCCCGTTCCACCTaGCTCAGGTCCTGGCCTTGCAGGCCTCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RVDTELLASRST*LRSWPCRPPSW
Trigger: CCAGCTGGGAGGCCTGCAAGGCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CACTTGGATCGCCTTGCTGGCTGCCGTCAAGGCTTGTaGGGGCTGCAGTGGGTCGGCCTTCTTCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: HLDRLAGCRQGL*GLQWVGLLQAR
Trigger: TCTGGCCTGAAGAAGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CGTGGGTCACAGCTGCAGCGTGTGCAGCCTTCAGGGTaGCTGGCGCTCAGCCCCCAGTACCCAGGTTTACAG +
Preference number: 6 (lower is better)
Translates to: RGSQLQRVQPSG*LALSPQYPGLQ
Trigger: CTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GGCTTGGCCTGCCTCTGGGTCAGTGCCTTTCCCTGCTaGGAAAGTGCTAGGGTTCCTGAGGGGCATCCGCGC +
Preference number: 6 (lower is better)
Translates to: GLACLWVSAFPC*ESARVPEGHPR
Trigger: GCGCGGATGCCCCTCAGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp AGTGGGCACCCCGGAAGTTGGGTTTGCAGACACACCGTCCCAACCTaGGGTCCTTCCGGCAGGCATTGCCCTGGGTCCCTGCAGCATTGC +
Preference number: 6 (lower is better)
Translates to: SGHPGSWVCRHTVPT*GPSGRHCPGSLQHC
Trigger: GCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGTGTCTGCAAACCCAACTTCCGGGGTGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp AGGGTGCCTCGTGGGTCACAGCTGCAGCGTGTGCAGCCTTCAGGGTaGCTGGCGCTCAGCCCCCAGTACCCAGGTTTACAGCGATCACAG +
Preference number: 6 (lower is better)
Translates to: RVPRGSQLQRVQPSG*LALSPQYPGLQRSQ
Trigger: CTGTGATCGCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACCCACGAGGCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TCACTCGGGGTCGACACCTACACTGGCCGGTTGTCGGGTCACAGGTaGTATGCAAGGAGCCATCGGCAGAGCAGTGGCAGGGGATGCAGC +
Preference number: 6 (lower is better)
Translates to: SLGVDTYTGRLSGHR*YARSHRQSSGRGCS
Trigger: GCTGCATCCCCTGCCACTGCTCTGCCGATGGCTCCTTGCATACAACCTGTGACCCGACAACCGGCCAGTGTAGGTGTCGACCCCGAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TGCTGGCGCTCAGCCCCCAGTACCCAGGTTTACAGCGATCACAGCTaGGCCCTTCCACGTGAGCCCGGCACATACAGGGAGCCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: CWRSAPSTQVYSDHS*ALPREPGTYREPVS
Trigger: AGACACAGGCTCCCTGTATGTGCCGGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GCCTGGCGGCTGCCCATGTACAGAACAAAGTGGTCCCCCGTGTTCTaGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGTGGAACTTG +
Preference number: 6 (lower is better)
Translates to: AWRLPMYRTKWSPVF*PGSGAGTGLWMWNL
Trigger: CAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTACATGGGCAGCCGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GAGACACTGGGCTTGGCCTGCCTCTGGGTCAGTGCCTTTCCCTGCTaGGAAAGTGCTAGGGTTCCTGAGGGGCATCCGCGCATCCCCACT +
Preference number: 6 (lower is better)
Translates to: ETLGLACLWVSAFPC*ESARVPEGHPRIPT
Trigger: AGTGGGGATGCGCGGATGCCCCTCAGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TACCCTGAAGCTGAGACTGCACGTGGGTGGCCGTACTaGGGGCTTCGGCAGCCACAGCCTTGGCGTGAGCAA +
Preference number: 6 (lower is better)
Translates to: YPEAETARGWPY*GLRQPQPWREQ
Trigger: TTGCTCACGCCAAGGCTGTGGCTGCCGAAGCCCTCAGTACGGCCACCCACGTGCAGTCTCAGCTTCAGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GTTCGGGCGCTGGCACTGGGCTCTGGATGTGGAACTTaGGGGCAGTGTACGCAGCAAGGTCGGCAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: VRALALGSGCGT*GQCTQQGRQGL
Trigger: GAGACCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TCATTGGCGCTGTCCGTGGTGGCGGGCTTCCACGGCTaGTGGTTGAAGCCTGGACAGCATCGGTCACAAGAG +
Preference number: 6 (lower is better)
Translates to: SLALSVVAGFHG*WLKPGQHRSQE
Trigger: CTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACGGACAGCGCCAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCCTGTGAGGGGGTCACACACGCTAGCCATGGTGCCTaGCTCATGGCAGTCACAGGGGCGACAGCTAGGATA +
Preference number: 6 (lower is better)
Translates to: ACEGVTHASHGA*LMAVTGATARI
Trigger: TATCCTAGCTGTCGCCCCTGTGACTGCCATGAGGCAGGCACCATGGCTAGCGTGTGTGACCCCCTCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CGCAGATCTGCGTGCAGCAGCTCTATCTCAGGCCGATaGTCGTGGGGTACCACCTGCCGGTCACTGCTCAAC +
Preference number: 6 (lower is better)
Translates to: RRSACSSSISGR*SWGTTCRSLLN
Trigger: GTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGAGATAGAGCTGCTGCACGCAGATCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp ACGGTACCAAGGCATCGCCTGGAGATCCTTGGCCCATaGGAGATGCCAGCTCATTCAGGGCACGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: TVPRHRLEILGP*EMPAHSGHGPQ
Trigger: CTGTGGGCCGTGCCCTGAATGAGCTGGCATCTCGCATGGGCCAAGGATCTCCAGGCGATGCCTTGGTACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CCGCATCCTCGGCAGCCTGAACGGCCTGAAGGATGCTaGTGTAGGCATTGGAGGCTTCCACAGCCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: PHPRQPERPEGC*CRHWRLPQPSG
Trigger: TCCAGAGGGCTGTGGAAGCCTCCAATGCCTACAGCAGCATCCTTCAGGCCGTTCAGGCTGCCGAGGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CTGCCGCATCCTCGGCAGCCTGAACGGCCTGAAGGATaGTGCTGTAGGCATTGGAGGCTTCCACAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: LPHPRQPERPEG*CCRHWRLPQPS
Trigger: AGAGGGCTGTGGAAGCCTCCAATGCCTACAGCAGCATCCTTCAGGCCGTTCAGGCTGCCGAGGATGCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TCCCCTGGTGTCCAAGGATGGTCTCCTCCAGGGCACTaGTGTTGGCTAACAGCTGCCGGGCTCCAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: SPGVQGWSPPGH*CWLTAAGLQLL
Trigger: TAGCAGCTGGAGCCCGGCAGCTGTTAGCCAACAGCAGTGCCCTGGAGGAGACCATCCTTGGACACCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CTGGGCTTGGCCTGCCTCTGGGTCAGTGCCTTTCCCTaGTTGGAAAGTGCTAGGGTTCCTGAGGGGCATCCG +
Preference number: 6 (lower is better)
Translates to: LGLACLWVSAFP*LESARVPEGHP
Trigger: CGGATGCCCCTCAGGAACCCTAGCACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TCCAGGCAGACACCTCCACCCTGGTACACGTTGTCCTaGTTCTGGCTGGCATTGCGCCGATCCACCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SRQTPPPWYTLS*FWLALRRSTSG
Trigger: CCCTGAGGTGGATCGGCGCAATGCCAGCCAGAACCAGGACAACGTGTACCAGGGTGGAGGTGTCTGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGCCCCCAGTACCCAGGTTTACAGCGATCACAGCTTaGCCCTTCCACGTGAGCCCGGCACATACAGGGAGC +
Preference number: 6 (lower is better)
Translates to: QPPVPRFTAITA*PFHVSPAHTGS
Trigger: GCTCCCTGTATGTGCCGGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGTAAACCTGGGTACTGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGTCACAGCTGCAGCGTGTGCAGCCTTCAGGGTTGCTaGCGCTCAGCCCCCAGTACCCAGGTTTACAGCGAT +
Preference number: 6 (lower is better)
Translates to: GHSCSVCSLQGC*RSAPSTQVYSD
Trigger: ATCGCTGTAAACCTGGGTACTGGGGGCTGAGCGCCAGCAACCCTGAAGGCTGCACACGCTGCAGCTGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TCAAACTCCAGGGGGTTGAAGCCAAAGCGTACAGCGTaGCCCTCGGGAGTGGCCGCCTCCTCTAGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SNSRGLKPKRTA*PSGVAASSSSS
Trigger: GCTGGAACTAGAGGAGGCGGCCACTCCCGAGGGCCACGCTGTACGCTTTGGCTTCAACCCCCTGGAGTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCAGGGTACGGCAGCCATAACCATGAGGACAAAAGCTaGCGTTGGCGTGGCCCTGCCAGATGCGGCCACCAT +
Preference number: 6 (lower is better)
Translates to: PGYGSHNHEDKS*RWRGPARCGHH
Trigger: ATGGTGGCCGCATCTGGCAGGGCCACGCCAACGCCAGCTTTTGTCCTCATGGTTATGGCTGCCGTACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGCCCACCAAGGGGTGGCAACCAAAGCTCTGTGGCTaGCAGACCAAGCAGTCAGGGGGAACAGTGCGTGGT +
Preference number: 6 (lower is better)
Translates to: QPTKGWQPKLCG*QTKQSGGTVRG
Trigger: ACCACGCACTGTTCCCCCTGACTGCTTGGTCTGCCAGCCACAGAGCTTTGGTTGCCACCCCTTGGTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TCTGCGTGCAGCAGCTCTATCTCAGGCCGATGCTCGTaGGGTACCACCTGCCGGTCACTGCTCAACAGCACC +
Preference number: 6 (lower is better)
Translates to: SACSSSISGRCS*GTTCRSLLNST
Trigger: GGTGCTGTTGAGCAGTGACCGGCAGGTGGTACCCCACGAGCATCGGCCTGAGATAGAGCTGCTGCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TGTCCAGTAGCTGGCCTGCCTGACCTTGGACCCCTGTaGCCTGACTGCCCAGCCTCTCCGTGTCCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: CPVAGLPDLGPL*PDCPASPCPVE
Trigger: TTCAACAGGACACGGAGAGGCTGGGCAGTCAGGCCACAGGGGTCCAAGGTCAGGCAGGCCAGCTACTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TCGCTCGTGTCCATGGCCAGCATGGCTTGTGCCTCCTaGATCTGGGCTGCTAGCTGGTTCTTCCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SLVSMASMACAS*IWAASWFFLAQ
Trigger: CTGGGCCAGGAAGAACCAGCTAGCAGCCCAGATCCAGGAGGCACAAGCCATGCTGGCCATGGACACGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TTGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGTaGAACTTGAGGGCAGTGTACGCAGCAAGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: LPGSGAGTGLWM*NLRAVYAARSA
Trigger: TGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTTGCTGGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTaGGTCGGCCTTCTTCAGGCCAGAGCCGAAGTCATA +
Preference number: 6 (lower is better)
Translates to: LAGCRQGLWGLQ*VGLLQARAEVI
Trigger: TATGACTTCGGCTCTGGCCTGAAGAAGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGAGGCCCTGGGAAGCCGCATGTGGACGGACAAGCATaGAGAGGTGGAGCCTATTCCTGTGGGACGGAGAGA +
Preference number: 6 (lower is better)
Translates to: GGPGKPHVDGQA*RGGAYSCGTER
Trigger: TCTCTCCGTCCCACAGGAATAGGCTCCACCTCTCCATGCTTGTCCGTCCACATGCGGCTTCCCAGGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGGACCCGATGGTGGAGAGCCTTCTGGCTCCAGGTCTaGCTGCCGTCCACCACAAGCTGGATCTGCTGCATT +
Preference number: 6 (lower is better)
Translates to: GTRWWRAFWLQV*LPSTTSWICCI
Trigger: AATGCAGCAGATCCAGCTTGTGGTGGACGGCAGCCAGACCTGGAGCCAGAAGGCTCTCCACCATCGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AACACCTGGCCCAGGTCCAGTGTGACGTTGACCTCATaGTACTCCAGGCCACGGGACAGGGGTGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: NTWPRSSVTLTS*YSRPRDRGGLC
Trigger: GCAGAGCCCACCCCTGTCCCGTGGCCTGGAGTACAATGAGGTCAACGTCACACTGGACCTGGGCCAGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TCACACACTTCACAGTGTATGCCATGGCCCCCAGGCTaGCCCGGTACAGGCACCTGGTGCTGCTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SHTSQCMPWPPG*PGTGTWCCWLQ
Trigger: CTGCAGCCAGCAGCACCAGGTGCCTGTACCGGGCAAGCCTGGGGGCCATGGCATACACTGTGAAGTGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GGTTCGGGCGCTGGCACTGGGCTCTGGATGTGGAACTaGAGGGCAGTGTACGCAGCAAGGTCGGCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: GSGAGTGLWMWN*RAVYAARSARS
Trigger: AGACCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AAACACTTGGATCGCCTTGCTGGCTGCCGTCAAGGCTaGTGGGGGCTGCAGTGGGTCGGCCTTCTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: KHLDRLAGCRQG*WGLQWVGLLQA
Trigger: GGCCTGAAGAAGGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AGCATCCTCGGTAGGCAGGGAGCTCTGGCCGAGCAGTaGAAGACTTGGGCAGGCTCCCGAGGTGCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: SILGRQGALAEQ*KTWAGSRGAEV
Trigger: CACTTCTGCACCTCGGGAGCCTGCCCAAGTCTTCAACTGCTCGGCCAGAGCTCCCTGCCTACCGAGGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TCGGCAAGGTCTCGTGGGGTACGCAGTCGTACCCCTGAACGCCCATaGAACTTCATGGACACCTTGACCTTGCTGGCGGCACTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: SARSRGVRSRTPERP*NFMDTLTLLAALRA
Trigger: AGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCATGAAGTTCAATGGGCGTTCAGGGGTACGACTGCGTACCCCACGAGACCTTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TTCTTGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGTGGAACTaGAGGGCAGTGTACGCAGCAAGGTCGGCAAGGTCTCGTGGGGTA +
Preference number: 6 (lower is better)
Translates to: FLPGSGAGTGLWMWN*RAVYAARSARSRGV
Trigger: TACCCCACGAGACCTTGCCGACCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GCTGGAGAACCAGCCAAGCTCTCTGGCAAACGGCCTGTGGTGTGGTaGCTCTGTGTGTCTACCTCCAGCCGGAGTGTGTCCCTGCCCATG +
Preference number: 6 (lower is better)
Translates to: AGEPAKLSGKRPVVW*LCVSTSSRSVSLPM
Trigger: CATGGGCAGGGACACACTCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GTGAAGTCTGACTCACAGTCGCAGGGCCGACAGACATaGGGTGAGTCGAGAGGCTGGTCAGGGGCACGGAAG +
Preference number: 6 (lower is better)
Translates to: VKSDSQSQGRQT*GESRGWSGARK
Trigger: CTTCCGTGCCCCTGACCAGCCTCTCGACTCACCTCATGTCTGTCGGCCCTGCGACTGTGAGTCAGACTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GGATACCCATGGTATCCTGGAAGGCATCGGTCACAGTaGGGACCGTCAAAGCCAGGTCGGCACTGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: GYPWYPGRHRSQ*GPSKPGRHWQR
Trigger: CCGCTGCCAGTGCCGACCTGGCTTTGACGGTCCTCACTGTGACCGATGCCTTCCAGGATACCATGGGTATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp AGACAAGGAGGTGGCGGCATTCCGGCAGAATGGAGATaGGCTGCTGGGGCTAATGTGGTAGCCCTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RQGGGGIPAEWR*AAGANVVALGG
Trigger: GCCACCCAGGGCTACCACATTAGCCCCAGCAGCTCATCTCCATTCTGCCGGAATGCCGCCACCTCCTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp ACATCAGGAAGTGCCAGGGGCAGGAAGCCGTGGCCGTaGAAAGTCATGGTGCGTCCCACTAGCAGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: TSGSARGRKPWP*KVMVRPTSRSA
Trigger: CGCTGACCTGCTAGTGGGACGCACCATGACTTTTCACGGCCACGGCTTCCTGCCCCTGGCACTTCCTGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CACCTACACTGGCCGGTTGTCGGGTCACAGGTTGTATaGAAGGAGCCATCGGCAGAGCAGTGGCAGGGGATG +
Preference number: 6 (lower is better)
Translates to: HLHWPVVGSQVV*KEPSAEQWQGM
Trigger: CATCCCCTGCCACTGCTCTGCCGATGGCTCCTTGCATACAACCTGTGACCCGACAACCGGCCAGTGTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGCTCAGTGCTGGGTGGGAAAGCCACTGGCTGGCTCTaGTCTGTGCAGTTGGTACAGCTGGAAAGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GSVLGGKATGWL*SVQLVQLESLP
Trigger: GGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCCAGCACTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp AGAGTACACCTTCAGCCTCGACCAGCAAGGCCCAGATaGCGGGGTTCAGCACAAAGGGTTCCCCAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: RVHLQPRPARPR*RGSAQRVPQSP
Trigger: GGGGCTTTGGGGAACCCTTTGTGCTGAACCCCGGCATCTGGGCCTTGCTGGTCGAGGCTGAAGGTGTACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCCAATGACTGGTTCTCCTCCCAGAAGCTGGTCAGCTaGTCCTGGACACGAGCCATCAGCCTCTGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: ANDWFSSQKLVS*SWTRAISLWAS
Trigger: CGAAGCCCAGAGGCTGATGGCTCGTGTCCAGGAGCAGCTGACCAGCTTCTGGGAGGAGAACCAGTCATTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GAGCGTGGGCCTCAGCAGCCTCTACCAAGTCCACCTTaGTGCTGGCAGGGGAAAAGGCCTGCATCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: ERGPQQPLPSPP*CWQGKRPASSS
Trigger: TGAAGAGGATGCAGGCCTTTTCCCCTGCCAGCAGCAAGGTGGACTTGGTAGAGGCTGCTGAGGCCCACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CATGTGGTGCAGGTCTGGCAAGTAGTGGTCCTTCGCTaGCTCGCTACAGGTGGGTCCTTGGGTGTTAGGGCG +
Preference number: 6 (lower is better)
Translates to: HVVQVWQVVVLR*LATGGSLGVRA
Trigger: CGCCCTAACACCCAAGGACCCACCTGTAGCGAGCCAGCGAAGGACCACTACTTGCCAGACCTGCACCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGCGACGTCCAGCTACATTGGGTCTGCATCTGCACTaGCCGCTGTCCATGTCACAGGTAGGGTCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: QRRPATLGLHLH*PLSMSQVGSVS
Trigger: GCTGACGGACCCTACCTGTGACATGGACAGCGGCCAGTGCAGATGCAGACCCAATGTAGCTGGACGTCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCGGGGCACAGGTATCACAGCGACGTCCAGCTACATTaGGTCTGCATCTGCACTGGCCGCTGTCCATGTCAC +
Preference number: 6 (lower is better)
Translates to: PGHRYHSDVQLH*VCICTGRCPCH
Trigger: GTGACATGGACAGCGGCCAGTGCAGATGCAGACCCAATGTAGCTGGACGTCGCTGTGATACCTGTGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTCAACAGCACCCAGCCCTCCATGTCCACGAACTCATaGCGGGCGAGGTTAGAGTTCCCACAGCGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: LNSTQPSMSTNS*RARLEFPQRSV
Trigger: CACAGAGCGCTGTGGGAACTCTAACCTCGCCCGCCATGAGTTCGTGGACATGGAGGGCTGGGTGCTGTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AGGCTGGCCGCCAGGTGCTCTAGGTCCTCCTTAGCCTaGTCTATGCCCTGCAGAAGCTCAGAAACATGGCCC +
Preference number: 6 (lower is better)
Translates to: RLAARCSRSSLA*SMPCRSSETWP
Trigger: GGGCCATGTTTCTGAGCTTCTGCAGGGCATAGACCAGGCTAAGGAGGACCTAGAGCACCTGGCGGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGTTCTTGCCAGGTTCGGGCGCTGGCACTGGGCTCTaGATGTGGAACTTGAGGGCAGTGTACGCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: VFLPGSGAGTGL*MWNLRAVYAAR
Trigger: CCTTGCTGCGTACACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AAAGTGGTCCCCCGTGTTCTTGCCAGGTTCGGGCGCTaGCACTGGGCTCTGGATGTGGAACTTGAGGGCAGT +
Preference number: 6 (lower is better)
Translates to: KVVPRVLARFGR*HWALDVELEGS
Trigger: ACTGCCCTCAAGTTCCACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGCTGTAGAGAGCAGGAGGCCCTGGGAAGCCGCATGTaGACGGACAAGCATGGAGAGGTGGAGCCTATTCCT +
Preference number: 6 (lower is better)
Translates to: GCREQEALGSRM*TDKHGEVEPIP
Trigger: AGGAATAGGCTCCACCTCTCCATGCTTGTCCGTCCACATGCGGCTTCCCAGGGCCTCCTGCTCTCTACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TCACTGCCACTCGGTGCCACCGTCCATCACAAAGCTTaGGGTAGGTCACCCACGTGGAAAACTCCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: SLPLGATVHHKA*GRSPTWKTPLP
Trigger: GGGCAGGGGAGTTTTCCACGTGGGTGACCTACCCCAAGCTTTGTGATGGACGGTGGCACCGAGTGGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TGGCAATCCAGGCAGACACCTCCACCCTGGTACACGTaGTCCTGGTTCTGGCTGGCATTGCGCCGATCCACC +
Preference number: 6 (lower is better)
Translates to: WQSRQTPPPWYT*SWFWLALRRST
Trigger: GGTGGATCGGCGCAATGCCAGCCAGAACCAGGACAACGTGTACCAGGGTGGAGGTGTCTGCCTGGATTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GTCGACACCTACACTGGCCGGTTGTCGGGTCACAGGTaGTATGCAAGGAGCCATCGGCAGAGCAGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: VDTYTGRLSGHR*YARSHRQSSGR
Trigger: CCTGCCACTGCTCTGCCGATGGCTCCTTGCATACAACCTGTGACCCGACAACCGGCCAGTGTAGGTGTCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TCAGCCCCCAGTACCCAGGTTTACAGCGATCACAGCTaGGCCCTTCCACGTGAGCCCGGCACATACAGGGAG +
Preference number: 6 (lower is better)
Translates to: SAPSTQVYSDHS*ALPREPGTYRE
Trigger: CTCCCTGTATGTGCCGGGCTCACGTGGAAGGGCCAAGCTGTGATCGCTGTAAACCTGGGTACTGGGGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CCCGGGGCACAGGTATCACAGCGACGTCCAGCTACATaGGGTCTGCATCTGCACTGGCCGCTGTCCATGTCA +
Preference number: 6 (lower is better)
Translates to: PGAQVSQRRPAT*GLHLHWPLSMS
Trigger: TGACATGGACAGCGGCCAGTGCAGATGCAGACCCAATGTAGCTGGACGTCGCTGTGATACCTGTGCCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp ACCTTGCTGGCGGCACTCCGGGCTTGGGCAATGAGCTaGCGCACACGACCAATGTTGGCAGACAAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TLLAALRAWAMS*RTRPMLADKAR
Trigger: CCTGGCTTTGTCTGCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CATGGACACCTTGACCTTGCTGGCGGCACTCCGGGCTaGGGCAATGAGCTTGCGCACACGACCAATGTTGGC +
Preference number: 6 (lower is better)
Translates to: HGHLDLAGGTPG*GNELAHTTNVG
Trigger: GCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CTGCCCATGTACAGAACAAAGTGGTCCCCCGTGTTCTaGCCAGGTTCGGGCGCTGGCACTGGGCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: LPMYRTKWSPVF*PGSGAGTGLWM
Trigger: CATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTACATGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CCAGCCAAGCTCTCTGGCAAACGGCCTGTGGTGTGGTaGCTCTGTGTGTCTACCTCCAGCCGGAGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PAKLSGKRPVVW*LCVSTSSRSVS
Trigger: GGACACACTCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GACACCTTGACCTTGCTGGCGGCACTCCGGGCTTGGGCAATGAGCTaGCGCACACGACCAATGTTGGCAGACAAAGCCAGGCTGGCATTG +
Preference number: 6 (lower is better)
Translates to: DTLTLLAALRAWAMS*RTRPMLADKARLAL
Trigger: CAATGCCAGCCTGGCTTTGTCTGCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GCTGTACAGATGTCACAGTACTGGCCCTGGATTGTCTaGTTGGGATCTCCGCCAGCCACCGGACCCCCAACC +
Preference number: 6 (lower is better)
Translates to: AVQMSQYWPWIV*LGSPPATGPPT
Trigger: GGTTGGGGGTCCGGTGGCTGGCGGAGATCCCAATCAGACAATCCAGGGCCAGTACTGTGACATCTGTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TCCCAGATAGGAGGGCGGAGCCTGCCAGTACAGCTCTaGGAAAGTGTCAGCCACAGAGCGCAGATCTGCGTG +
Preference number: 6 (lower is better)
Translates to: SQIGGRSLPVQL*ESVSHRAQICV
Trigger: CACGCAGATCTGCGCTCTGTGGCTGACACTTTCTCAGAGCTGTACTGGCAGGCTCCGCCCTCCTATCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GAGCCAGGAAGGCAGCGATCTGAATGGCCATGGCACTaGCAGGGGACACATCGGCCTAGGAAGAGACCCTTG +
Preference number: 6 (lower is better)
Translates to: EPGRQRSEWPWH*QGTHRPRKRPL
Trigger: CAAGGGTCTCTTCCTAGGCCGATGTGTCCCCTGTCAGTGCCATGGCCATTCAGATCGCTGCCTTCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp AGCCTCGACAGGCACCCGTCAGGGGGTCGCAGTCACTaGAGATCATGTTGGGGTCTCCATTACCGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SLDRHPSGGRSH*RSCWGLHYRCS
Trigger: ACTGCAGCGGTAATGGAGACCCCAACATGATCTTCAGTGACTGCGACCCCCTGACGGGTGCCTGTCGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CGCGAGTATTCTGTGGTGCAGATGACGTCGTCGTCCTaGGTGATGCGCTCTAGAGTCCGAGGTCCAAACCGC +
Preference number: 6 (lower is better)
Translates to: REYSVVQMTSSS*VMRSRVRGPNR
Trigger: GCGGTTTGGACCTCGGACTCTAGAGCGCATCACGCAGGACGACGACGTCATCTGCACCACAGAATACTCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGAGAACCACACAGTGGTCACACACTTCACAGTGTATaGCATGGCCCCCAGGCTTGCCCGGTACAGGCACCT +
Preference number: 6 (lower is better)
Translates to: GEPHSGHTLHSV*HGPQACPVQAP
Trigger: AGGTGCCTGTACCGGGCAAGCCTGGGGGCCATGGCATACACTGTGAAGTGTGTGACCACTGTGTGGTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GCTGTGGCAATGTCTTCTCCAGGGTGGACACTGAACTaGTTGCATCCCGTTCCACCTGGCTCAGGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: AVAMSSPGWTLN*LHPVPPGSGPG
Trigger: GCCAGGACCTGAGCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACATTGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TGCCCATGTACAGAACAAAGTGGTCCCCCGTGTTCTTaGCAGGTTCGGGCGCTGGCACTGGGCTCTGGATGT +
Preference number: 6 (lower is better)
Translates to: CPCTEQSGPPCS*QVRALALGSGC
Trigger: ACATCCAGAGCCCAGTGCCAGCGCCCGAACCTGGCAAGAACACGGGGGACCACTTTGTTCTGTACATGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GAGACACTCCCATGTAGTCCCCAGTGGCCTGGCGGCTaGCCATGTACAGAACAAAGTGGTCCCCCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: ETLPCSPQWPGG*PCTEQSGPPCS
Trigger: AGAACACGGGGGACCACTTTGTTCTGTACATGGGCAGCCGCCAGGCCACTGGGGACTACATGGGAGTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GTGGCCAAACTGGAGGGTCCTGTCGATGCTGACGGCTaGAAACTGCTCCCCGATGTTCTCGTCGATGCTGAG +
Preference number: 6 (lower is better)
Translates to: VAKLEGPVDADG*KLLPDVLVDAE
Trigger: CTCAGCATCGACGAGAACATCGGGGAGCAGTTTGCAGCCGTCAGCATCGACAGGACCCTCCAGTTTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGCTGGCAGGCACACTGCAGCCTGAAAGGATCCAATaGGTCCTTGGCGTCACAGACATCTGCGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: VLAGTLQPERIQ*VLGVTDICVAM
Trigger: CATGGCCACGCAGATGTCTGTGACGCCAAGGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CGTGGTGGCGGGCTTCCACGGCTGCTGGTTGAAGCCTaGACAGCATCGGTCACAAGAGCCTCCACATGTATT +
Preference number: 6 (lower is better)
Translates to: RGGGLPRLLVEA*TASVTRASTCI
Trigger: AATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCAGCAGCCGTGGAAGCCCGCCACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGAAGCCGTAGAAGCCGGGGCTACATTCCTGACAAGTaGCACCTGTGTAGCCAGGACGGCAGTGGCACAAAC +
Preference number: 6 (lower is better)
Translates to: GSRRSRGYIPDK*HLCSQDGSGTN
Trigger: GTTTGTGCCACTGCCGTCCTGGCTACACAGGTGCCACTTGTCAGGAATGTAGCCCCGGCTTCTACGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TTGGGTGTTAGGGCGGCACCTGCAGGCACCTGTCTTTaGTTCACAGCCTTGACCCAGGGCACCACCAACATC +
Preference number: 6 (lower is better)
Translates to: LGVRAAPAGTCL*FTALTQGTTNI
Trigger: GATGTTGGTGGTGCCCTGGGTCAAGGCTGTGAACCAAAGACAGGTGCCTGCAGGTGCCGCCCTAACACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AAGGCAGGCTCAGTGCTGGGTGGGAAAGCCACTGGCTaGCTCTGCTCTGTGCAGTTGGTACAGCTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: KAGSVLGGKATG*LCSVQLVQLES
Trigger: GCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCCAGCACTGAGCCTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGGGGCACATTCCTGGCACGAGTCCCCACGGTAGTTaGCAGGGCACATACACAGTTCCACATTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: QGHIPGTSPHGS*QGTYTVPHCWL
Trigger: CAGCCAGCAATGTGGAACTGTGTATGTGCCCTGCCAACTACCGTGGGGACTCGTGCCAGGAATGTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ACTGACAGGGGACACATCGGCCTAGGAAGAGACCCTTaGTGTCCCGGTAATAGCCAGGGGCACATTCCTGGC +
Preference number: 6 (lower is better)
Translates to: TDRGHIGLGRDP*CPGNSQGHIPG
Trigger: GCCAGGAATGTGCCCCTGGCTATTACCGGGACACCAAGGGTCTCTTCCTAGGCCGATGTGTCCCCTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GCGTCCACTCTGGGGATCACAGGTTTCTGTCCCACATaGGGAACAGTCACACCGGGTGCAGTTGCCTGGCAA +
Preference number: 6 (lower is better)
Translates to: ASTLGITGFCPT*GTVTPGAVAWQ
Trigger: TTGCCAGGCAACTGCACCCGGTGTGACTGTTCCCCATGTGGGACAGAAACCTGTGATCCCCAGAGTGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCAGTCACGCCTGCTTTGCACAGGCAGCGTCCACTCTaGGGATCACAGGTTTCTGTCCCACATGGGGAACAG +
Preference number: 6 (lower is better)
Translates to: PVTPALHRQRPL*GSQVSVPHGEQ
Trigger: CTGTTCCCCATGTGGGACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CGTGAGCAATCTTCTCACTGGTCTCGCTCGTGTCCATaGCCAGCATGGCTTGTGCCTCCTGGATCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: REQSSHWSRSCP*PAWLVPPGSGL
Trigger: CAGCCCAGATCCAGGAGGCACAAGCCATGCTGGCCATGGACACGAGCGAGACCAGTGAGAAGATTGCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ATGGACACCTTGACCTTGCTGGCGGCACTCCGGGCTTaGGCAATGAGCTTGCGCACACGACCAATGTTGGCA +
Preference number: 6 (lower is better)
Translates to: MDTLTLLAALRA*AMSLRTRPMLA
Trigger: TGCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GAACCAGCCAAGCTCTCTGGCAAACGGCCTGTGGTGTaGTTGCTCTGTGTGTCTACCTCCAGCCGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: EPAKLSGKRPVV*LLCVSTSSRSV
Trigger: CACACTCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTGGAGAACCAGCCAAGCTCTCTGGCAAACGGCCTGTaGTGTGGTTGCTCTGTGTGTCTACCTCCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: LENQPSSLANGL*CGCSVCLPPAG
Trigger: TCCGGCTGGAGGTAGACACACAGAGCAACCACACCACAGGCCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAAAGTAGCGGGGAGACACTGGGCTTGGCCTGCCTCTaGGTCAGTGCCTTTCCCTGCTTGGAAAGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: QSSGETLGLACL*VSAFPCLESAR
Trigger: CCTAGCACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTCCCCGCTACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CCAGGCCTACAGCGCTCACATTGGTCCCCTTCTGTGTaGTGCTGGCAGCCCACACAAATGCCAGAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: PGLQRSHWSPSV*CWQPTQMPEPG
Trigger: TCCTGGCTCTGGCATTTGTGTGGGCTGCCAGCACAACACAGAAGGGGACCAATGTGAGCGCTGTAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CGTACCCCTGAACGCCCATTGAACTTCATGGACACCTaGACCTTGCTGGCGGCACTCCGGGCTTGGGCAATG +
Preference number: 6 (lower is better)
Translates to: RTPERPLNFMDT*TLLAALRAWAM
Trigger: CATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCATGAAGTTCAATGGGCGTTCAGGGGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp AACACACGTTTGCGATTGCCAGCCAATAGAAACACTTGGATCGCCTaGCTGGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTGGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: NTRLRLPANRNTWIA*LAAVKACGGCSGSA
Trigger: GGCCGACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TGTTGCTGTTGGCAGCTGTACAGATGTCACAGTACTGGCCCTGGATaGTCTGATTGGGATCTCCGCCAGCCACCGGACCCCCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: CCCWQLYRCHSTGPG*SDWDLRQPPDPQPA
Trigger: AGCTGGTTGGGGGTCCGGTGGCTGGCGGAGATCCCAATCAGACAATCCAGGGCCAGTACTGTGACATCTGTACAGCTGCCAACAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp CTCCTCCACAGGTACCAGGGTGACGCTGTGCAGGAAGAAGTGAGCTaGCTCAGCTGTGAGCCGGATGCTAGCCTCAGAGTCCAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: LLHRYQGDAVQEEVS*LSCEPDASLRVQVE
Trigger: TTCTACCTGGACTCTGAGGCTAGCATCCGGCTCACAGCTGAGCAAGCTCACTTCTTCCTGCACAGCGTCACCCTGGTACCTGTGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GACAGTTCCTGTTTCCATTGCAGGGCTTCCTTCAGCCGTTCCTGGTaGCGGCTGTTGAGTTCCTCAGCCTCCCGGGTGGTATTAACGGCC +
Preference number: 6 (lower is better)
Translates to: DSSCFHCRASFSRSW*RLLSSSASRVVLTA
Trigger: GGCCGTTAATACCACCCGGGAGGCTGAGGAACTCAACAGCCGCAACCAGGAACGGCTGAAGGAAGCCCTGCAATGGAAACAGGAACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TTCAACCGTTTGAGGTCCACGTACTTGCCCAGAGCCTTAATACCCTaGATGCAGCCACGGACAGAGCCTCCGGAGGGGAAGAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: FNRLRSTYLPRALIP*MQPRTEPPEGKSCR
Trigger: ACGGCAGCTCTTCCCCTCCGGAGGCTCTGTCCGTGGCTGCATCAAGGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAAACGGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TCCACAGGTACCAGGGTGACGCTGTGCAGGAAGAAGTaGGCTTGCTCAGCTGTGAGCCGGATGCTAGCCTCA +
Preference number: 6 (lower is better)
Translates to: STGTRVTLCRKK*ACSAVSRMLAS
Trigger: TGAGGCTAGCATCCGGCTCACAGCTGAGCAAGCTCACTTCTTCCTGCACAGCGTCACCCTGGTACCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GGAATCGGGAGGCTAGACAGGCAGCACTGCTGGGGTTaGAAGTTCCATGACTGCTCACACAGAAGACCCGGG +
Preference number: 6 (lower is better)
Translates to: GIGRLDRQHCWG*KFHDCSHRRPG
Trigger: CCCGGGTCTTCTGTGTGAGCAGTCATGGAACTTTCAACCCCAGCAGTGCTGCCTGTCTAGCCTCCCGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CAAGGAGAAGGTCCCCACGCGACACTGGTCACATCTTaGGCCCTGCACGTTCTCCTTGCAATGGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: QGEGPHATLVTS*ALHVLLAMALA
Trigger: GGCCAATGCCATTGCAAGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGTCGCGTGGGGACCTTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CACCCTGGTACACGTTGTCCTGGTTCTGGCTGGCATTaGGCCGATCCACCTCAGGGTCGTAGTAACAGTCGT +
Preference number: 6 (lower is better)
Translates to: HPGTRCPGSGWH*ADPPQGRSNSR
Trigger: ACGACTGTTACTACGACCCTGAGGTGGATCGGCGCAATGCCAGCCAGAACCAGGACAACGTGTACCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGCCAAAGAAGCCATCCTTGCAGGCTGCACAGGTCTTaGCACACACGTGAGCCTTGCAGAAGCACTGCCCAT +
Preference number: 6 (lower is better)
Translates to: GQRSHPCRLHRS*HTREPCRSTAH
Trigger: ATGGGCAGTGCTTCTGCAAGGCTCACGTGTGTGGCAAGACCTGTGCAGCCTGCAAGGATGGCTTCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp AAGGTCCCCACGCGACACTGGTCACATCTTGAGCCCTaGACGTTCTCCTTGCAATGGCATTGGCCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: KVPTRHWSHLEP*TFSLQWHWPVR
Trigger: CCTCACAGGCCAATGCCATTGCAAGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGTCGCGTGGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TCTGAGAAAGTGTCAGCCACAGAGCGCAGATCTGCGTaGAGCAGCTCTATCTCAGGCCGATGCTCGTGGGGT +
Preference number: 6 (lower is better)
Translates to: SEKVSATERRSA*SSSISGRCSWG
Trigger: ACCCCACGAGCATCGGCCTGAGATAGAGCTGCTGCACGCAGATCTGCGCTCTGTGGCTGACACTTTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CAATGCCAAAGTAGCGGGGAGACACTGGGCTTGGCCTaGCTCTGGGTCAGTGCCTTTCCCTGCTTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: QCQSSGETLGLA*LWVSAFPCLES
Trigger: ACTTTCCAAGCAGGGAAAGGCACTGACCCAGAGGCAGGCCAAGCCCAGTGTCTCCCCGCTACTTTGGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TACAGATGTCACAGTACTGGCCCTGGATTGTCTGATTaGGATCTCCGCCAGCCACCGGACCCCCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: YRCHSTGPGLSD*DLRQPPDPQPA
Trigger: AGCTGGTTGGGGGTCCGGTGGCTGGCGGAGATCCCAATCAGACAATCCAGGGCCAGTACTGTGACATCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CGTCCCAACCTTGGGTCCTTCCGGCAGGCATTGCCCTaGGTCCCTGCAGCATTGCAATCACAGTTCACGATT +
Preference number: 6 (lower is better)
Translates to: RPNLGSFRQALP*VPAALQSQFTI
Trigger: AATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AATGAGTACGTAGTCCAGCCAGAGCCACCGGCCTTCTaGCACACGCACAGTCACGGTGAGCTCGTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: NEYVVQPEPPAF*HTHSHGELVVC
Trigger: ACAGACAACGAGCTCACCGTGACTGTGCGTGTGCCAGAAGGCCGGTGGCTCTGGCTGGACTACGTACTCATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CATCTTGAGCCCTGCACGTTCTCCTTGCAATGGCATTaGCCTGTGAGGGGGTCACACACGCTAGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: HLEPCTFSLQWH*PVRGSHTLAMV
Trigger: CACCATGGCTAGCGTGTGTGACCCCCTCACAGGCCAATGCCATTGCAAGGAGAACGTGCAGGGCTCAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCCACATGGGGAACAGTCACACCGGGTGCAGTTGCCTaGCAACAAAGCATTGCCATAGAAGCCTGGGGCACA +
Preference number: 6 (lower is better)
Translates to: PTWGTVTPGAVA*QQSIAIEAWGT
Trigger: TGTGCCCCAGGCTTCTATGGCAATGCTTTGTTGCCAGGCAACTGCACCCGGTGTGACTGTTCCCCATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GCCCGCTCGAGGTCATCCAGAAGGAGAACCACACAGTaGTCACACACTTCACAGTGTATGCCATGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: ARSRSSRRRTTQ*SHTSQCMPWPP
Trigger: TGGGGGCCATGGCATACACTGTGAAGTGTGTGACCACTGTGTGGTTCTCCTTCTGGATGACCTCGAGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TTGAGTTCCTCAGCCTCCCGGGTGGTATTAACGGCCTaGTTCAGGGCCTCACGAAGATCCATGAGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: LSSSASRVVLTA*FRASRRSMRPD
Trigger: GTCTGGCCTCATGGATCTTCGTGAGGCCCTGAACCAGGCCGTTAATACCACCCGGGAGGCTGAGGAACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGTCCATGGCCAGCATGGCTTGTGCCTCCTGGATCTaGGCTGCTAGCTGGTTCTTCCTGGCCCAGACATTA +
Preference number: 6 (lower is better)
Translates to: VSMASMACASWI*AASWFFLAQTL
Trigger: TAATGTCTGGGCCAGGAAGAACCAGCTAGCAGCCCAGATCCAGGAGGCACAAGCCATGCTGGCCATGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTTTGGCCAGCAGCTGTGGCAATGTCTTCTCCAGGGTaGACACTGAACTGCTTGCATCCCGTTCCACCTGGC +
Preference number: 6 (lower is better)
Translates to: VWPAAVAMSSPG*TLNCLHPVPPG
Trigger: GCCAGGTGGAACGGGATGCAAGCAGTTCAGTGTCCACCCTGGAGAAGACATTGCCACAGCTGCTGGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GATTGCCAGCCAATAGAAACACTTGGATCGCCTTGCTaGCTGCCGTCAAGGCTTGTGGGGGCTGCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: DCQPIETLGSPC*LPSRLVGAAVG
Trigger: ACCCACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AGGTACCAGGGTGACGCTGTGCAGGAAGAAGTGAGCTaGCTCAGCTGTGAGCCGGATGCTAGCCTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RYQGDAVQEEVS*LSCEPDASLRV
Trigger: GACTCTGAGGCTAGCATCCGGCTCACAGCTGAGCAAGCTCACTTCTTCCTGCACAGCGTCACCCTGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CCAAGGAGAAGGTCCCCACGCGACACTGGTCACATCTaGAGCCCTGCACGTTCTCCTTGCAATGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: PRRRSPRDTGHI*SPARSPCNGIG
Trigger: GCCAATGCCATTGCAAGGAGAACGTGCAGGGCTCAAGATGTGACCAGTGTCGCGTGGGGACCTTCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TGTTTCCATTGCAGGGCTTCCTTCAGCCGTTCCTGGTaGCGGCTGTTGAGTTCCTCAGCCTCCCGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: CFHCRASFSRSW*RLLSSSASRVV
Trigger: TACCACCCGGGAGGCTGAGGAACTCAACAGCCGCAACCAGGAACGGCTGAAGGAAGCCCTGCAATGGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TTGAGGTCCACGTACTTGCCCAGAGCCTTAATACCCTaGATGCAGCCACGGACAGAGCCTCCGGAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: LRSTYLPRALIP*MQPRTEPPEGK
Trigger: CTTCCCCTCCGGAGGCTCTGTCCGTGGCTGCATCAAGGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp AACCTTGGGTCCTTCCGGCAGGCATTGCCCTGGGTCCCTGCAGCATaGCAATCACAGTTCACGATTTGTCCAGCGGGAAGCACCTGTTCT +
Preference number: 6 (lower is better)
Translates to: NLGSFRQALPWVPAA*QSQFTICPAGSTCS
Trigger: AGAACAGGTGCTTCCCGCTGGACAAATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GGTTTGCAGACACACCGTCCCAACCTTGGGTCCTTCCGGCAGGCATaGCCCTGGGTCCCTGCAGCATTGCAATCACAGTTCACGATTTGT +
Preference number: 6 (lower is better)
Translates to: GLQTHRPNLGSFRQA*PWVPAALQSQFTIC
Trigger: ACAAATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCCTGCCGGAAGGACCCAAGGTTGGGACGGTGTGTCTGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TCAGTGCTGGGTGGGAAAGCCACTGGCTGGCTCTGCTCTGTGCAGTaGGTACAGCTGGAAAGCTTGCCCTCTTCACGAACAGAGATCTGC +
Preference number: 6 (lower is better)
Translates to: SVLGGKATGWLCSVQ*VQLESLPSSRTEIC
Trigger: GCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACCCAGCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp AGCACCATCATGAGTTCTTCTCGGGACACGGGGTTGTaGGTCTCCAAGTGCCGGAAGTTCCCCTCTACCAGC +
Preference number: 6 (lower is better)
Translates to: STIMSSSRDTGL*VSKCRKFPSTS
Trigger: GCTGGTAGAGGGGAACTTCCGGCACTTGGAGACTCACAACCCCGTGTCCCGAGAAGAACTCATGATGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TCACACATGGGGATGCAGGGTTACTGGGATCACTGCTaGCAAAGCCAGGCCTACAGCGCTCACATTGGTCCC +
Preference number: 6 (lower is better)
Translates to: SHMGMQGYWDHC*QSQAYSAHIGP
Trigger: GGGACCAATGTGAGCGCTGTAGGCCTGGCTTTGTCAGCAGTGATCCCAGTAACCCTGCATCCCCATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp ATACTGAGCCAGCTGGTCCCGAATGTGTGTGGCCAATaGCTGGTTCTCCTCCCAGAAGCTGGTCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ILSQLVPNVCGQ*LVLLPEAGQLL
Trigger: GAGCAGCTGACCAGCTTCTGGGAGGAGAACCAGTCATTGGCCACACACATTCGGGACCAGCTGGCTCAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp AGGGCCTCACGAAGATCCATGAGGCCAGACTCATACTaGGCCAGCTGGTCCCGAATGTGTGTGGCCAATGAC +
Preference number: 6 (lower is better)
Translates to: RASRRSMRPDSY*ASWSRMCVAND
Trigger: GTCATTGGCCACACACATTCGGGACCAGCTGGCTCAGTATGAGTCTGGCCTCATGGATCTTCGTGAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GTCGGCAAGGTCTCGTGGGGTACGCAGTCGTACCCCTaGACGCCCATTGAACTTCATGGACACCTTGACCTT +
Preference number: 6 (lower is better)
Translates to: VGKVSWGTQSYP*TPIELHGHLDL
Trigger: AAGGTCAAGGTGTCCATGAAGTTCAATGGGCGTTCAGGGGTACGACTGCGTACCCCACGAGACCTTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TCGCTCCCAGGGGCCACCGTGTCTCCCTTGATCTCATaGACCATCTGTTTCTCCACGGTGACAGACATGTGG +
Preference number: 6 (lower is better)
Translates to: SLPGATVSPLIS*TICFSTVTDMW
Trigger: CCACATGTCTGTCACCGTGGAGAAACAGATGGTTCATGAGATCAAGGGAGACACGGTGGCCCCTGGGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GAAAGGATCCAATGGGTCCTTGGCGTCACAGACATCTaGGTGGCCATGACAGACACAGCGCCCACCAATGCT +
Preference number: 6 (lower is better)
Translates to: ERIQWVLGVTDI*VAMTDTAPTNA
Trigger: AGCATTGGTGGGCGCTGTGTCTGTCATGGCCACGCAGATGTCTGTGACGCCAAGGACCCATTGGATCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp AACAGCGGTCACAACGTTGTCCAGTCACGCCTGCTTTaGACAGGCAGCGTCCACTCTGGGGATCACAGGTTT +
Preference number: 6 (lower is better)
Translates to: NSGHNVVQSRLL*TGSVHSGDHRF
Trigger: AAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TGGCCCGCTCCACACGCACCAACACACGTTTGCGATTaGCAGCCAATAGAAACACTTGGATCGCCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: WPAPHAPTHVCD*QPIETLGSPCW
Trigger: CCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp AAAGCCAAAGCCAGAATAGACCACTTCGGTGATGGGTaGCACATCAGGAAGTGCCAGGGGCAGGAAGCCGTG +
Preference number: 6 (lower is better)
Translates to: KAKARIDHFGDG*HIRKCQGQEAV
Trigger: CACGGCTTCCTGCCCCTGGCACTTCCTGATGTGGCACCCATCACCGAAGTGGTCTATTCTGGCTTTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CCACTGGCTGGCTCTGCTCTGTGCAGTTGGTACAGCTaGAAAGCTTGCCCTCTTCACGAACAGAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: PLAGSALCSWYS*KACPLHEQRSA
Trigger: GGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GTGGGAAAGCCACTGGCTGGCTCTGCTCTGTGCAGTTaGTACAGCTGGAAAGCTTGCCCTCTTCACGAACAG +
Preference number: 6 (lower is better)
Translates to: VGKPLAGSALCS*YSWKACPLHEQ
Trigger: CTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ACCCCACAGACACAGGGAGCTTGGAACTGTAACTGCTaGCAGGAAGACCTCCTACAGAGAGGGTGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: TPQTQGAWNCNC*QEDLLQRGCRA
Trigger: AGCCCTACACCCTCTCTGTAGGAGGTCTTCCTGCCAGCAGTTACAGTTCCAAGCTCCCTGTGTCTGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp CCTGGACAGCATCGGTCACAAGAGCCTCCACATGTATaGTGCTGGCAGGCACACTGCAGCCTGAAAGGATCC +
Preference number: 6 (lower is better)
Translates to: PGQHRSQEPPHV*CWQAHCSLKGS
Trigger: GGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GGTGGGAAAGCCACTGGCTGGCTCTGCTCTGTGCAGTaGGTACAGCTGGAAAGCTTGCCCTCTTCACGAACA +
Preference number: 6 (lower is better)
Translates to: GGKATGWLCSVQ*VQLESLPSSRT
Trigger: TGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGCTTTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AAACAGCGGTCACAACGTTGTCCAGTCACGCCTGCTTaGCACAGGCAGCGTCCACTCTGGGGATCACAGGTT +
Preference number: 6 (lower is better)
Translates to: KQRSQRCPVTPA*HRQRPLWGSQV
Trigger: AACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TTGCGATTGCCAGCCAATAGAAACACTTGGATCGCCTaGCTGGCTGCCGTCAAGGCTTGTGGGGGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: LRLPANRNTWIA*LAAVKACGGCS
Trigger: ACTGCAGCCCCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GTGGCCCGCTCCACACGCACCAACACACGTTTGCGATaGCCAGCCAATAGAAACACTTGGATCGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VARSTRTNTRLR*PANRNTWIALL
Trigger: CAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TGGTTGAAGCCTGGACAGCATCGGTCACAAGAGCCTCCACATGTATaGTGCTGGCAGGCACACTGCAGCCTGAAAGGATCCAATGGGTCC +
Preference number: 6 (lower is better)
Translates to: WLKPGQHRSQEPPHV*CWQAHCSLKGSNGS
Trigger: GGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCCAGGCTTCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GCCACTGGCTGGCTCTGCTCTGTGCAGTTGGTACAGCTGGAAAGCTaGCCCTCTTCACGAACAGAGATCTGCCCATTCACGCTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: ATGWLCSVQLVQLES*PSSRTEICPFTLVD
Trigger: ATCAACCAGCGTGAATGGGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCAGCCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TATCCTTCCAAACAGCGGTCACAACGTTGTCCAGTCACGCCTGCTTaGCACAGGCAGCGTCCACTCTGGGGATCACAGGTTTCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: YPSKQRSQRCPVTPA*HRQRPLWGSQVSVP
Trigger: TGGGACAGAAACCTGTGATCCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTTTGGAAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GCATTGCTCAAAACCGAAGTATCCTTCCAAACAGCGGTCACAACGTaGTCCAGTCACGCCTGCTTTGCACAGGCAGCGTCCACTCTGGGG +
Preference number: 6 (lower is better)
Translates to: ALLKTEVSFQTAVTT*SSHACFAQAASTLG
Trigger: CCCCAGAGTGGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTTTGGAAGGATACTTCGGTTTTGAGCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp ATTGAACTTCATGGACACCTTGACCTTGCTGGCGGCACTCCGGGCTaGGGCAATGAGCTTGCGCACACGACCAATGTTGGCAGACAAAGC +
Preference number: 6 (lower is better)
Translates to: IELHGHLDLAGGTPG*GNELAHTTNVGRQS
Trigger: GCTTTGTCTGCCAACATTGGTCGTGTGCGCAAGCTCATTGCCCAAGCCCGGAGTGCCGCCAGCAAGGTCAAGGTGTCCATGAAGTTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TCTACGCTGAACACAGTGGCCCGCTCCACACGCACCAACACACGTTaGCGATTGCCAGCCAATAGAAACACTTGGATCGCCTTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: STLNTVARSTRTNTR*RLPANRNTWIALLA
Trigger: AGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCACTGTGTTCAGCGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp CCGAAACTGATGCCCGTGGTGTTCAACCGTTTGAGGTCCACGTACTaGCCCAGAGCCTTAATACCCTTGATGCAGCCACGGACAGAGCCT +
Preference number: 6 (lower is better)
Translates to: PKLMPVVFNRLRSTY*PRALIPLMQPRTEP
Trigger: AGGCTCTGTCCGTGGCTGCATCAAGGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAAACGGTTGAACACCACGGGCATCAGTTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp AGGTCAGCGGTGCAGCCGAAACTGATGCCCGTGGTGTTCAACCGTTaGAGGTCCACGTACTTGCCCAGAGCCTTAATACCCTTGATGCAG +
Preference number: 6 (lower is better)
Translates to: RSAVQPKLMPVVFNR*RSTYLPRALIPLMQ
Trigger: CTGCATCAAGGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAAACGGTTGAACACCACGGGCATCAGTTTCGGCTGCACCGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp CCCCGAAGTCGCTGTACAAAAACATTGCTGATGCAGCCACTGAAGTaGTGGAAGGTACCAGACACAGGCAGGCCTCCCAGGAGAAGCCGT +
Preference number: 6 (lower is better)
Translates to: PRSRCTKTLLMQPLK*WKVPDTGRPPRRSR
Trigger: ACGGCTTCTCCTGGGAGGCCTGCCTGTGTCTGGTACCTTCCACAACTTCAGTGGCTGCATCAGCAATGTTTTTGTACAGCGACTTCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp AGCATAGACAAGACAGTTCTCTGTGGAGTGCAGGGCTaGGGGACGGTAGGTACAGGCCTCCGTTACTCGATG +
Preference number: 6 (lower is better)
Translates to: SIDKTVLCGVQG*GTVGTGLRYSM
Trigger: CATCGAGTAACGGAGGCCTGTACCTACCGTCCCTCAGCCCTGCACTCCACAGAGAACTGTCTTGTCTATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CTATGCCCTGCAGAAGCTCAGAAACATGGCCCAAGATaGGACTGGCAGCTTGAAGAGTGGCCTTCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: LCPAEAQKHGPR*DWQLEEWPSGW
Trigger: CCACCCTGAAGGCCACTCTTCAAGCTGCCAGTCTCATCTTGGGCCATGTTTCTGAGCTTCTGCAGGGCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CAAGAGCCTCCACATGTATTGTGCTGGCAGGCACACTaGAGCCTGAAAGGATCCAATGGGTCCTTGGCGTCA +
Preference number: 6 (lower is better)
Translates to: QEPPHVLCWQAH*SLKGSNGSLAS
Trigger: TGACGCCAAGGACCCATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGCTCTGCTCTGTGCAGTTGGTACAGCTGGAAAGCTTaGCCTCTTCACGAACAGAGATCTGCCCATTCACGC +
Preference number: 6 (lower is better)
Translates to: GSALCSWYSWKA*PLHEQRSAHSR
Trigger: GCGTGAATGGGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CTGATTGATGCCAAGGATGATGCCAGACAGGTTGATTaGCAGCTGGTTCAGCTTCTGAGCGTGGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LIDAKDDARQVD*QLVQLLSVGLS
Trigger: GCTGAGGCCCACGCTCAGAAGCTGAACCAGCTGGCAATCAACCTGTCTGGCATCATCCTTGGCATCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp ACACAGTGGCCCGCTCCACACGCACCAACACACGTTTaGGATTGCCAGCCAATAGAAACACTTGGATCGCCT +
Preference number: 6 (lower is better)
Translates to: TQWPAPHAPTHV*DCQPIETLGSP
Trigger: AGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCACTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CAGACTCATACTGAGCCAGCTGGTCCCGAATGTGTGTaGCCAATGACTGGTTCTCCTCCCAGAAGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: QTHTEPAGPECV*PMTGSPPRSWS
Trigger: TGACCAGCTTCTGGGAGGAGAACCAGTCATTGGCCACACACATTCGGGACCAGCTGGCTCAGTATGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TGCGCACACGACCAATGTTGGCAGACAAAGCCAGGCTaGCATTGTGAACTCCACGGTTCTCTAGACGGCTCA +
Preference number: 6 (lower is better)
Translates to: CAHDQCWQTKPG*HCELHGSLDGS
Trigger: TGAGCCGTCTAGAGAACCGTGGAGTTCACAATGCCAGCCTGGCTTTGTCTGCCAACATTGGTCGTGTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ATCTGTTTCTCCACGGTGACAGACATGTGGCCAAACTaGAGGGTCCTGTCGATGCTGACGGCTGCAAACTGC +
Preference number: 6 (lower is better)
Translates to: ICFSTVTDMWPN*RVLSMLTAANC
Trigger: GCAGTTTGCAGCCGTCAGCATCGACAGGACCCTCCAGTTTGGCCACATGTCTGTCACCGTGGAGAAACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GTGCCATCGATGGCGTTGCTCACAGGGTGTGCCTTGTaGCTGTTGGCAGCTGTACAGATGTCACAGTACTGG +
Preference number: 6 (lower is better)
Translates to: VPSMALLTGCAL*LLAAVQMSQYW
Trigger: CCAGTACTGTGACATCTGTACAGCTGCCAACAGCAACAAGGCACACCCTGTGAGCAACGCCATCGATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AACACAGTGGCCCGCTCCACACGCACCAACACACGTTaGCGATTGCCAGCCAATAGAAACACTTGGATCGCC +
Preference number: 6 (lower is better)
Translates to: NTVARSTRTNTR*RLPANRNTWIA
Trigger: GGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTTGGTGCGTGTGGAGCGGGCCACTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp ATGCCCGTGGTGTTCAACCGTTTGAGGTCCACGTACTaGCCCAGAGCCTTAATACCCTTGATGCAGCCACGG +
Preference number: 6 (lower is better)
Translates to: MPVVFNRLRSTY*PRALIPLMQPR
Trigger: CCGTGGCTGCATCAAGGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAAACGGTTGAACACCACGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GTGCAGCCGAAACTGATGCCCGTGGTGTTCAACCGTTaGAGGTCCACGTACTTGCCCAGAGCCTTAATACCC +
Preference number: 6 (lower is better)
Translates to: VQPKLMPVVFNR*RSTYLPRALIP
Trigger: GGGTATTAAGGCTCTGGGCAAGTACGTGGACCTCAAACGGTTGAACACCACGGGCATCAGTTTCGGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GGCATTGCCCTGGGTCCCTGCAGCATTGCAATCACAGTTCACGATTaGTCCAGCGGGAAGCACCTGTTCTCTCGTGTCATTGTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: GIALGPCSIAITVHD*SSGKHLFSRVIVGK
Trigger: TTTCCCCACAATGACACGAGAGAACAGGTGCTTCCCGCTGGACAAATCGTGAACTGTGATTGCAATGCTGCAGGGACCCAGGGCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CTCGTAGGGAATGAAGATATCACCTCGCTGGGTCTCTaGGTGCAGCTCATAGTGGAGGGTTCCACCGTAGGA +
Preference number: 6 (lower is better)
Translates to: LVGNEDITSLGL*VQLIVEGSTVG
Trigger: TCCTACGGTGGAACCCTCCACTATGAGCTGCACTCAGAGACCCAGCGAGGTGATATCTTCATTCCCTACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TCACATAGGGCATCTTGGCCTTGGGGAGCTCTAATGTaGCAACTCCCTCACTGCCTGGGAAGAACAGGCCAT +
Preference number: 6 (lower is better)
Translates to: SHRASWPWGALM*QLPHCLGRTGH
Trigger: ATGGCCTGTTCTTCCCAGGCAGTGAGGGAGTTGTCACATTAGAGCTCCCCAAGGCCAAGATGCCCTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp GGACAGCATCGGTCACAAGAGCCTCCACATGTATTGTaGTGGCAGGCACACTGCAGCCTGAAAGGATCCAAT +
Preference number: 6 (lower is better)
Translates to: GQHRSQEPPHVL*WQAHCSLKGSN
Trigger: ATTGGATCCTTTCAGGCTGCAGTGTGCCTGCCAGCACAATACATGTGGAGGCTCTTGTGACCGATGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp AGCATAATCCAGGCCAAAGAAGCCATCCTTGCAGGCTaGACAGGTCTTGCCACACACGTGAGCCTTGCAGAA +
Preference number: 6 (lower is better)
Translates to: SIIQAKEAILAG*TGLATHVSLAE
Trigger: TTCTGCAAGGCTCACGTGTGTGGCAAGACCTGTGCAGCCTGCAAGGATGGCTTCTTTGGCCTGGATTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CCTGGCCACAATCCTGGGCTGGATAGCCATCATGTGTaGGTAGCCTCTCCAGCTAAAGTTCTCAAACTCCAG +
Preference number: 6 (lower is better)
Translates to: PGHNPGLDSHHV*VASPAKVLKLQ
Trigger: CTGGAGTTTGAGAACTTTAGCTGGAGAGGCTACGCACACATGATGGCTATCCAGCCCAGGATTGTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp CGCAGCTCCTGGTCAAAGCGTTTTGTGTTGCTGAACTaGTTCTCAAAGCTGATGCGGGCAAAGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: RSSWSKRFVLLN*FSKLMRAKPLP
Trigger: TGGCAGTGGCTTTGCCCGCATCAGCTTTGAGAAGCAGTTCAGCAACACAAAACGCTTTGACCAGGAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GAGTCCGAGGTCCAAACCGCTCCAAACAATCCCTCTTaGAGGAGGCAAAGAACTGCCACGGCTGATAAGTGT +
Preference number: 6 (lower is better)
Translates to: ESEVQTAPNNPS*RRQRTATADKC
Trigger: ACACTTATCAGCCGTGGCAGTTCTTTGCCTCCTCCAAGAGGGATTGTTTGGAGCGGTTTGGACCTCGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp CTCGATGCTGTAGGAGAGCTGCCTCATAGTAGGTGCTaGGCAGTAGGACCACGTAGTCCAAGAGTACACCTT +
Preference number: 6 (lower is better)
Translates to: LDAVGELPHSRC*AVGPRSPRVHL
Trigger: AAGGTGTACTCTTGGACTACGTGGTCCTACTGCCCAGCACCTACTATGAGGCAGCTCTCCTACAGCATCGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp GGCCATTTCTTAAGACGCAACCGTCTGCAAAATTATTaGAGGGCACTGCCAAGGGGCAAGGGCAGCTCACAC +
Preference number: 6 (lower is better)
Translates to: GHFLRRNRLQNY*RALPRGKGSSH
Trigger: GTGTGAGCTGCCCTTGCCCCTTGGCAGTGCCCTCCAATAATTTTGCAGACGGTTGCGTCTTAAGAAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp AACACACGTTTGCGATTGCCAGCCAATAGAAACACTTaGATCGCCTTGCTGGCTGCCGTCAAGGCTTGTGGG +
Preference number: 6 (lower is better)
Translates to: NTRLRLPANRNT*IALLAAVKACG
Trigger: CCCACAAGCCTTGACGGCAGCCAGCAAGGCGATCCAAGTGTTTCTATTGGCTGGCAATCGCAAACGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp TGTGGGACGGAGAGATACCCACAAACTGTAGGTAACTaGGCAGGGGTCCCCCAAACTGGTATGCATCCTGAA +
Preference number: 6 (lower is better)
Translates to: CGTERYPQTVGN*AGVPQTGMHPE
Trigger: TTCAGGATGCATACCAGTTTGGGGGACCCCTGCCCAGTTACCTACAGTTTGTGGGTATCTCTCCGTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp TGGCTCTGCTCTGTGCAGTTGGTACAGCTGGAAAGCTaGCCCTCTTCACGAACAGAGATCTGCCCATTCACG +
Preference number: 6 (lower is better)
Translates to: WLCSVQLVQLES*PSSRTEICPFT
Trigger: CGTGAATGGGCAGATCTCTGTTCGTGAAGAGGGCAAGCTTTCCAGCTGTACCAACTGCACAGAGCAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AAAACCGAAGTATCCTTCCAAACAGCGGTCACAACGTaGTCCAGTCACGCCTGCTTTGCACAGGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: KTEVSFQTAVTT*SSHACFAQAAS
Trigger: GGACGCTGCCTGTGCAAAGCAGGCGTGACTGGACAACGTTGTGACCGCTGTTTGGAAGGATACTTCGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp TCTTCACGAACAGAGATCTGCCCATTCACGCTGGTTGATCCACGGTaGACATATCGGAAAACCAGCCGAAAGAGGTCAGGGGAGGTCACG +
Preference number: 6 (lower is better)
Translates to: SSRTEICPFTLVDPR*TYRKTSRKRSGEVT
Trigger: CGTGACCTCCCCTGACCTCTTTCGGCTGGTTTTCCGATATGTCAACCGTGGATCAACCAGCGTGAATGGGCAGATCTCTGTTCGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp CTGAGGGGTGTGCACAGCCACTCCCATCTCTTGGTGTaGATCCTCACCGACATATTCCACCACGAGAACATA +
Preference number: 6 (lower is better)
Translates to: LRGVHSHSHLLV*ILTDIFHHENI
Trigger: TATGTTCTCGTGGTGGAATATGTCGGTGAGGATTCACACCAAGAGATGGGAGTGGCTGTGCACACCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp TTGGAGGCTTCCACAGCCCTCTGGATGAAGCGGTCCTaGTTGATGCCAAGGATGATGCCAGACAGGTTGATT +
Preference number: 6 (lower is better)
Translates to: LEASTALWMKRS*LMPRMMPDRLI
Trigger: AATCAACCTGTCTGGCATCATCCTTGGCATCAATCAGGACCGCTTCATCCAGAGGGCTGTGGAAGCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS GCA 72 bp TTACTCGATGCTGTAGGAGAGCTGCCTCATAGTAGGTaGTGGGCAGTAGGACCACGTAGTCCAAGAGTACAC +
Preference number: 6 (lower is better)
Translates to: LLDAVGELPHSR*WAVGPRSPRVH
Trigger: GTGTACTCTTGGACTACGTGGTCCTACTGCCCAGCACCTACTATGAGGCAGCTCTCCTACAGCATCGAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CCA 72 bp ACCAGGGTGCCTTCCTGCACTGCCAGGCACAAGAACTaGCTCTCTTGCTTGAGGAAAAAGATGATCCCATTG +
Preference number: 6 (lower is better)
Translates to: TRVPSCTARHKN*LSCLRKKMIPL
Trigger: CAATGGGATCATCTTTTTCCTCAAGCAAGAGAGCCAGTTCTTGTGCCTGGCAGTGCAGGAAGGCACCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp AGCACCATCAGCAAAGACCCTTTGAGTTTCCACCTCTaGGTTCATAAAACGGAGTGTCACGTGGCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: STISKDPLSFHL*VHKTECHVALP
Trigger: AGGGAGGGCCACGTGACACTCCGTTTTATGAACCAAGAGGTGGAAACTCAAAGGGTCTTTGCTGATGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 90 bp GGCACAGTGGCTGATGAAGTCATAGGATTTGTCCAAAGGCTCCTCTaGGAGGTAACTGGAGCTGTAAGCATCCTCAGGGACAATGAGTAC +
Preference number: 6 (lower is better)
Translates to: GTVADEVIGFVQRLL*EVTGAVSILRDNEY
Trigger: GTACTCATTGTCCCTGAGGATGCTTACAGCTCCAGTTACCTCCAAGAGGAGCCTTTGGACAAATCCTATGACTTCATCAGCCACTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS CAA 72 bp GCTGATGAAGTCATAGGATTTGTCCAAAGGCTCCTCTaGGAGGTAACTGGAGCTGTAAGCATCCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: ADEVIGFVQRLL*EVTGAVSILRD
Trigger: GTCCCTGAGGATGCTTACAGCTCCAGTTACCTCCAAGAGGAGCCTTTGGACAAATCCTATGACTTCATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6
CDS TCA 72 bp GTTGTAGCTGGTCATCCACATACAGCCATACCCCTGTaGCATTGCTATAGAAGGCAACATAGTGAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: VVAGHPHTAIPL*HCYRRQHSEEH
Trigger: GTGCTCCTCACTATGTTGCCTTCTATAGCAATGTCACAGGGGTATGGCTGTATGTGGATGACCAGCTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015791.6