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Pregenerated sensors for LAMA4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019846

Ensembl transcript IDs: ENSMUST00000019992.6

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCGGCGGATGCAGCCGGTaGAGGGTTTGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPGGCSR*RVCWEP
Trigger: TGGCTCCCAGCAAACCCTTCACCGGCTGCATCCGCC...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCTCCACCCACACGCCTaGTGGTGTCAGCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPLHPHA*WCQPLL
Trigger: AAGCAGTGGCTGACACCAGCAGGCGTGTGGGTGGAG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCGGCAGCCTGAGTAGCTaGGCAGGTTTAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPGSLSS*AGLSWQ
Trigger: CTGCCAGCTTAAACCTGCCCAGCTACTCAGGCTGCC...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAGCTGGCAGGGAGCTTaGAGTTCGCAGGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTSWQGA*SSQAPH
Trigger: GTGGGGTGCCTGCGAACTTCAAGCTCCCTGCCAGCT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCTGGCTCAGCAATTCCTaGGCCTCATCTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPWLSNS*ASSASS
Trigger: TGAGGAGGCAGATGAGGCCCAGGAATTGCTGAGCCA...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCTTCTGCTGTGCTACTaGGACTGGGGACTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPLLLCY*DWGLSR
Trigger: TCTTGACAGTCCCCAGTCTCAGTAGCACAGCAGAAG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCACACTGCACAGTTCTTaGCTGTCCTGGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPTLHSS*LSWRLH
Trigger: ATGGAGACGCCAGGACAGCCAAGAACTGTGCAGTGT...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCGATGAGTCAAAGGTCTaGAGGTTCTGGGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPDESKV*RFWDQL
Trigger: CAACTGGTCCCAGAACCTGCAGACCTTTGACTCATC...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCGGATCCTCTGGATGCTaGCAGAAATGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPGSSGC*QKCCLQ
Trigger: CTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCC...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCATCATTATTCAGAGTaGCCAGCTCTAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPHHYSE*PALGSL
Trigger: CAGGCTGCCTAGAGCTGGCCACTCTGAATAATGATG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCTGTCAATTACAAAGTaGCGGATGCAGCCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPLSITK*RMQPVK
Trigger: CTTCACCGGCTGCATCCGCCACTTTGTAATTGACAG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCTCAGCAGCCCGGATTTaGTCTCTTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTSAARI*SLRWRA
Trigger: CGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGA...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCGCTGGTGTCAGCCACTaGTTCATCATTGCTAGAATC +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPAGVSH*FIIARI
Trigger: GATTCTAGCAATGATGAAGCAGTGGCTGACACCAGC...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGGCGACTGTTGGCCGTaGCGCCATATTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTGDCWP*RHIDRH
Trigger: ATGCCTATCAATATGGCGGCACGGCCAACAGTCGCC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCAAGCAGTTCCTGCACTaGCCAGTGATTTCATCACAG +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPKQFLH*PVISSQ
Trigger: CTGTGATGAAATCACTGGCCAGTGCAGGAACTGCTT...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCTGCCAGTTCTCAGCTTaGCTCAGCAATTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTCQFSA*LSNSWA
Trigger: GGCCCAGGAATTGCTGAGCCAAGCTGAGAACTGGCA...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAAGACCAAGCGACCATaGGCCAAGAACAGGGTCATG +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTKTKRP*AKNRVM
Trigger: CATGACCCTGTTCTTGGCCCATGGTCGCTTGGTCTT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCAACGGCCCAACTACATaGTTCACTTCTGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPNGPTT*FTSEST
Trigger: TGTAGACTCAGAAGTGAACCATGTAGTTGGGCCGTT...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGTGCACTTCGACAGCTaGCTGGCCATCAAACATCAT +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTVHFDS*LAIKHH
Trigger: ATGATGTTTGATGGCCAGTCAGCTGTCGAAGTGCAC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGAAAATCATCCCATGTaGGGAACGGGTCTTCAGACG +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTENHPM*GTGLQT
Trigger: CGTCTGAAGACCCGTTCCTCACATGGGATGATTTTC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCTACATGGTTCACTTCTaGGTCTACATCCAACTGAAC +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPYMVHF*VYIQLN
Trigger: GTTCAGTTGGATGTAGACTCAGAAGTGAACCATGTA...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCTGTTTGAGTCTGCTCTaGCTTCCCTTTTGTTGGATT +
Preference number: 4 (lower is better)
Translates to: GESFSREGSSRPLTLPTPCLSLL*LPFCWI
Trigger: AATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACA...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCTCCTGCACTGGCCAGTaGTTTCATCACAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTSCTGQ*FHHSLQ
Trigger: TTGAAGACTGTGATGAAATCACTGGCCAGTGCAGGA...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAGGAGCTCACAGGCTTaGAATCCAGGAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTRSSQA*NPGEFP
Trigger: TGGAAATTCTCCTGGATTCCAAGCCTGTGAGCTCCT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACCACAGGGCCAGGACTaGGCACCAAGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPPQGQD*APSCAP
Trigger: TGGAGCACAGCTTGGTGCTCAGTCCTGGCCCTGTGG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGAACCAAGTCATGACTaGGGTTACTCAGGTTGGATA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTEPSHD*GYSGWI
Trigger: TATCCAACCTGAGTAACCTCAGTCATGACTTGGTTC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCCATCACAGAGATTCTaGTTGGGAGTTACTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTPSQRF*LGVTEV
Trigger: TACCTCAGTAACTCCCAAGCAGAATCTCTGTGATGG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGCAAAGTTGGCCAGGTaGGGCAAGGGACAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPAKLAR*GKGQGH
Trigger: GTGCCCCTGTCCCTTGCCCCACCTGGCCAACTTTGC...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTTCAAAGATCAGGTTaGGATCCGAATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTLQRSG*DPNFHC
Trigger: GCAGTGGAAATTCGGATCCCAACCTGATCTTTGAAG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAACATCATGGAGACTTaGATCTTGCTTGCGACACTC +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTNIMET*ILLATL
Trigger: GAGTGTCGCAAGCAAGATCCAAGTCTCCATGATGTT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGAGTCTACATCCAACTaGACCACGTTTGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTESTSN*TTFESL
Trigger: TAGAGATTCAAACGTGGTTCAGTTGGATGTAGACTC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCGGTCAATTGTATCCATaGTTTCCTTCTCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTGQLYP*FPSQPA
Trigger: TGCTGGTTGAGAAGGAAAGCATGGATACAATTGACC...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGGACAGGGGCACGGCTaGCAGAACCGGGGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAGQGHG*QNRGVP
Trigger: AGGCACACCCCGGTTCTGCCAGCCGTGCCCCTGTCC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACATTCAGTCTGTCTCTaGGGGCGCCCTTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPHSVCL*GRPSST
Trigger: TGTGGAGGAAGGGCGCCCTCAGAGACAGACTGAATG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTGTCTGAGATGGAGGTaGCCACGAAGTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCCLRWR*PRSGAA
Trigger: GGCTGCCCCACTTCGTGGTCACCTCCATCTCAGACA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATTGCCTGCCGACCACTaGGCTCCCCTCGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPLPADH*APLDVK
Trigger: TTTGACATCGAGGGGAGCGCAGTGGTCGGCAGGCAA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAATAAACTTTTCTTCTaGTGTGCTACTGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTNKLFF*CATETG
Trigger: CCCAGTCTCAGTAGCACAGCAGAAGAAAAGTTTATT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCCTATTGCCCTGGGGCTaGTGGAGAGGTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSLLPWG*WRGGSG
Trigger: CCCACTGCCACCTCTCCAGCAGCCCCAGGGCAATAG...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTGTCTTCTGCATCCCTaGCATGGTCGAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCCLLHP*HGRGPG
Trigger: ACCAGGCCCTCGACCATGTCAGGGATGCAGAAGACA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGGGGGACAACCTCGGTaGGGTTTCTCACTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAGGQPR*GFSLRP
Trigger: GGGACGCAGTGAGAAACCTCACCGAGGTTGTCCCCC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAACTTCCCTCTCCTCGTaGTGTCCCTCACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPTSLSS*CPSPLH
Trigger: ATGCAGTGGTGAGGGACATCACGAGGAGAGGGAAGT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCCCCCTGACGCTGCGTTaGAGCAGACAGCACACCAGA +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSPLTLR*SRQHTR
Trigger: TCTGGTGTGCTGTCTGCTCCAACGCAGCGTCAGGGG...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCGGGCTGCTGGAGAGGTaGCAGTGGGAATCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCGLLER*QWESLG
Trigger: TCCAAGAGATTCCCACTGCCACCTCTCCAGCAGCCC...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCATGTTCTATTGCCCTaGGGCTGCTGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCHVLLP*GCWRGG
Trigger: GCCACCTCTCCAGCAGCCCCAGGGCAATAGAACATG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAGACGAATGGCAAACTaGGATTTTTCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: PLQPGESFSREGSSRPLTRRMAN*DFSPKS
Trigger: AGATTTTGGTGAAAAATCCCAGTTTGCCATTCGTCT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCACCGGGGTGTGCCTCTaGTGGAGTCTCCAATATAGC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCTGVCL*WSLQYS
Trigger: GCTATATTGGAGACTCCATCAGAGGCACACCCCGGT...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACAGCCCTACTCTGAGTaGAAGCCAGTTTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPQPYSE*KPVYPW
Trigger: CCAGGGATAAACTGGCTTTCACTCAGAGTAGGGCTG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACTCGTAGACCATCAATaGCCAGTCGACCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPLVDHQ*PVDHCS
Trigger: AGAGCAGTGGTCGACTGGTCATTGATGGTCTACGAG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGGCCGCCCCCACAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAGRPHS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGTGGGGGCGGCC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTGAGGTGACCACGAAGTaGGGCAGCCCATCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCEVTTK*GSPSWY
Trigger: GTACCACGATGGGCTGCCCCACTTCGTGGTCACCTC...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCGTGTTCAAACTCCTaGCGACTGTTGGCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSSCSNS*RLLAVP
Trigger: CGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGA...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCAAAGCGAGTCACCTaGCCAAACTTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSKRVT*PNFPLL
Trigger: GAGGAGAGGGAAGTTTGGTCAGGTGACTCGCTTTGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTGGGTGAGGAATGGCTaGCGGCTTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCWVRNG*RLRISS
Trigger: GGAAGAGATCCGAAGCCGGCAGCCATTCCTCACCCA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGAGCGGGTGTCATTGTaGAGCCGCTGCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAERVSL*SRCQFS
Trigger: TGAGAACTGGCAGCGGCTGCACAATGACACCCGCTC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCGGCAGAAATGTTGCTTaGAGGCCGCTTCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSGRNVA*RPLLLH
Trigger: GTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCC...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTGCTGGCAGAAATGTTaGTTGCAGGCCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCCWQKC*LQAASA
Trigger: AGCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACTCGGATCCTCTGGATaGTGGCAGAAATGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPLGSSG*WQKCCL
Trigger: CAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCTGCATCCCTGACATaGTCGAGGGCCTGGTTAATG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSASLT*SRAWLM
Trigger: CATTAACCAGGCCCTCGACCATGTCAGGGATGCAGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCACCCACACGCCTGCTaGTGTCAGCCACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCHPHAC*CQPLLH
Trigger: ATGAAGCAGTGGCTGACACCAGCAGGCGTGTGGGTG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAAGGTCTGCAGGTTCTaGGACCAGTTGCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCKVCRF*DQLLRL
Trigger: CAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTT...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTGGGTGCACATTCTCCTaGCAGTGTGCGGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCGCTFS*QCAEES
Trigger: GGATTCTTCCGCACACTGTCAGGAGAATGTGCACCC...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACACAGCGTTCACACTTaGATCCGGTGGTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPHSVHT*IRWYFV
Trigger: TACGAAATACCACCGGATTCAAGTGTGAACGCTGTG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCCTGGTTTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSSWFEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAAACCAGGA...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGCGACACTCCTGGTTTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTTCATTGTGCAGCCGCTaGCAGTTCTCAGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAASLCSR*QFSAWL
Trigger: GAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGA...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCGATGTCCCTCACCACTaGATAACTGGAGCCATCGAA +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCDVPHH*ITGAIE
Trigger: TTCGATGGCTCCAGTTATGCAGTGGTGAGGGACATC...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCCTGTTGTGTTCCGCTaGCAGTGCAGACAGAATCCG +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCPVVFR*QCRQNP
Trigger: CGGATTCTGTCTGCACTGCCAGCGGAACACAACAGG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATCTTCCAGCATTTTCTaGGCCAACACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPSSSIF*ANTSFS
Trigger: TGAGAAGCTGGTGTTGGCCCAGAAAATGCTGGAAGA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTGGTTAATGGATTCCTaGAGGTCGGACAGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCWLMDS*RSDSLA
Trigger: CGCTAAGCTGTCCGACCTCCAGGAATCCATTAACCA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTGGGCTCTGCCGGCTTTaGAGGAGGCTTCATGTACAA +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCGLCRL*RRLHVQ
Trigger: TTGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCC...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATCACCACTGCATAACTaGAGCCATCGAAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPSPLHN*SHRRSS
Trigger: GCTACTTCTTCGATGGCTCCAGTTATGCAGTGGTGA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATATCAGAGAGTCCTCTaGGCATCCATAACCAACTCC +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPYQRVL*ASITNS
Trigger: GGAGTTGGTTATGGATGCCCAGAGGACTCTCTGATA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAGTTCCTGTTTCCATTaGCCCTTCAAAGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPSSCFH*PFKARG
Trigger: ACCCCTTGCTTTGAAGGGCCAATGGAAACAGGAACT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCTGGTTTTCTCTTTCTaGCAGCCTTGTTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCLVFSF*QPCSEE
Trigger: CTCCTCAGAACAAGGCTGTCAGAAAGAGAAAACCAG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCCCCTTTCTTGAGGCTTaGCTTCCCTTCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSPFLEA*LPFSWS
Trigger: ACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGG...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAGAGCATCTTGCTGTTaGTCTCTTGGATTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPRASCC*SLGFCP
Trigger: GGGACAAAATCCAAGAGATCAACAGCAAGATGCTCT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCTGGCAGCCCTACTCTaGGTGAAAGCCAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAALAALL*VKASLS
Trigger: GGATAAACTGGCTTTCACTCAGAGTAGGGCTGCCAG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGATAAATGGGACCCTTaGTTTTCCAGGCAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAADKWDP*FSRQRH
Trigger: GTGGCGCTGCCTGGAAAATCAAGGGTCCCATTTATC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCAAGCCAGTTTATCCCTaGCACAGGGCACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSKPVYP*HRALTL
Trigger: CAAAGTCAGTGCCCTGTGCCAGGGATAAACTGGCTT...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAAGGCCATTGTCAGCTaGTGTTCGGATTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPKAIVS*CSDFYV
Trigger: GACATAGAAATCCGAACACCAGCTGACAATGGCCTT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTTTGACGCTGTGGCCATaGACAAGGGTTCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAALTLWP*TRVPEL
Trigger: CAGTTCTGGAACCCTTGTCCATGGCCACAGCGTCAA...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCTCCCTGTGATCAACTaGCTTTGGATTCAACGGCCC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCLPVIN*LWIQRP
Trigger: GGGCCGTTGAATCCAAAGCCAGTTGATCACAGGGAG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCATCCTTATGGTAAATaGTCTGCGTGTCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCHPYGK*SACQSH
Trigger: GTGGGATTGACACGCAGATCATTTACCATAAGGATG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGTAATGTTCGGAAATTaGAGCCTCCTTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPVMFGN*SLLQSH
Trigger: ATGGCTTTGAAGGAGGCTTCAATTTCCGAACATTAC...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCGTGAAATTAGCATACTaGGGACTGATGGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSVKLAY*GLMGEP
Trigger: TGGCTCACCCATCAGTCCTCAGTATGCTAATTTCAC...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACCAAGAACAGGGTCATaGAATCATTCTCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPPRTGS*NHSLLG
Trigger: ACCAAGAAGAGAATGATTTCATGACCCTGTTCTTGG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCCATCCAAGCACTCATaGGAATTGCCATTACAGTCA +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCPSKHS*ELPLQS
Trigger: TGACTGTAATGGCAATTCCCATGAGTGCTTGGATGG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCATTTGCTCTCTTCGATaGAGAGCGCTGCTAATCGCA +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSICSLR*RALLIA
Trigger: TGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAAT...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCATGTTGTTTCTCATaGTCCCGCTGCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSCCFS*SRCLKV
Trigger: CACTTTCAAGCAGCGGGACCATGAGAAACAACATGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTAGCTCTCGGATCCTCTaGATGCTGGCAGAAATGTTG +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCSSRIL*MLAEML
Trigger: CAACATTTCTGCCAGCATCCAGAGGATCCGAGAGCT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCGTTGTCCAGTGAAATaGAAAACACGTCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCRCPVK*KTRPTL
Trigger: CAGGGTCGGACGTGTTTTCCATTTCACTGGACAACG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSYRCFQ*VRGFHS
Trigger: ACTATGGAAACCCCTTACTCATTGGAAGCACCTGTA...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTCATCGGCTTCCTGTTaGAGATTGTATGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCSSASC*RLYAWS
Trigger: GGACCATGCATACAATCTTCAACAGGAAGCCGATGA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCAGCCCGTTCATGTCTaGACTGTGCAAATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCQPVHV*TVQISA
Trigger: AGCAGAAATTTGCACAGTTCAGACATGAACGGGCTG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTAAAACATACTGCCATTaGCCATCAGGAGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCKTYCH*PSGAQG
Trigger: GCCTTGTGCTCCTGATGGTCAATGGCAGTATGTTTT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTTTCTTCTCAGTTGTTTaGGTCTGCTCTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAFFSVV*VCSAFP
Trigger: AGGGAAGGCAGAGCAGACTCAAACAACTGAGAAGAA...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCTATTCATGTCTTCTaGATCCCTGACATGGTCGAG +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSSIHVF*IPDMVE
Trigger: CTCGACCATGTCAGGGATGCAGAAGACATGAATAGA...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATTGGATAGTTTTCCTTaGAGCTCATTTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPLDSFP*SSFLAP
Trigger: TGGAGCCAAAAATGAGCTGCAAGGAAAACTATCCAA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTACTTCGACAGCTGACTaGCCATCAAACATCATGGAG +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCTSTAD*PSNIME
Trigger: CTCCATGATGTTTGATGGCCAGTCAGCTGTCGAAGT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTTTCATATCTTGTGTCTaGGATGGAGGTGACCACGAA +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAFISCV*DGGDHE
Trigger: TTCGTGGTCACCTCCATCTCAGACACAAGATATGAA...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTAGACATTTTTCACAGTaGTCTCCTGTTGTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCRHFSQ*SPVVFR
Trigger: GCGGAACACAACAGGAGAGCACTGTGAAAAATGTCT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCAAGGAGTCATCTCCTaGAAACTCCCCCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCQGVIS*KLPLLN
Trigger: ATTAAGAAGGGGGAGTTTGCAGGAGATGACTCCTTG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCCTAGGGTTTCTGTCTaGTCCAGTAAATTGAAATCT +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCPRVSV*SSKLKS
Trigger: AGATTTCAATTTACTGGAGCAGACAGAAACCCTAGG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTTGCCCATTGAAATATaGTCTGCGAGATATCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCLPIEI*SARYQR
Trigger: TCTCTGATATCTCGCAGAGCATATTTCAATGGGCAA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTTGCTGTTGATCTCTTaGATTTTGTCCCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCLLLIS*ILSLML
Trigger: CAACATGAGGGACAAAATCCAAGAGATCAACAGCAA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTGCAGTGGGAATCTCTTaGAGCTTTCTGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCAVGIS*SFLFQK
Trigger: TTTCTGGAACAGAAAGCTCCAAGAGATTCCCACTGC...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGGGTCTTCAGACGAATaGCAAACTGGGATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAGSSDE*QTGIFH
Trigger: GTGAAAAATCCCAGTTTGCCATTCGTCTGAAGACCC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCATAGCCGCCTTCTGTaGAAAAATAAGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCHSRLL*KNKFLF
Trigger: AAACAGGAACTTATTTTTCCACAGAAGGCGGCTATG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTTTCGTTGGCTTCACTaGCATAATTGGCGATATTTT +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCFRWLH*HNWRYF
Trigger: AAAATATCGCCAATTATGTCAGTGAAGCCAACGAAA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCCCAGGTTATCATTTTTaGTTGCCAGACCCATGTATT +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSPGYHF*LPDPCI
Trigger: AATACATGGGTCTGGCAATCAAAAATGATAACCTGG...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCCGATGTAGATGTCCGTaGAAGGAATCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSRCRCP*KESFSS
Trigger: AGAAGAAAAAGATTCCTTTCACGGACATCTACATCG...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCATTCTCTTCTTGGTCTaGGACATAGAAAATCATCCC +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSILFLV*DIENHP
Trigger: GGGATGATTTTCTATGTCTCAGACCAAGAAGAGAAT...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTAACTGTGCAAATTTCTaGTTAGCTCATCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCNCANF*LAHRLP
Trigger: AGGAAGCCGATGAGCTAAGCAGAAATTTGCACAGTT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTATTCAGAGCAAGTTCTaGTGTTTCGTTGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAIQSKF*CFVGFT
Trigger: AGTGAAGCCAACGAAACAGCAGAACTTGCTCTGAAT...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTTGAAATCTTTCTTTTaGAACTGGAACCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCLKSFF*NWNPFM
Trigger: CATGAAGGGGTTCCAGTTCCAAAAGAAAGATTTCAA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR TCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTATTTTCATAGACGTTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCIFIDV*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAACGTCTATGAAAAT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCATTGTATTTCTCCTaGCTTCTAATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSLYFS*LLIFSF
Trigger: GAAACTGAAGATTAGAAGCCAGGAGAAATACAATGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR GCA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCGAAGCAATAAAACTTTaGCCATTGAAATATGCTCTG +
Preference number: 4 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSEAIKL*PLKYAL
Trigger: CAGAGCATATTTCAATGGGCAAAGTTTTATTGCTTC...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CCA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTTTCTTAGGGTATACTaGTTTTCTCTTTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCFLRVY*FSLSDS
Trigger: GCTGTCAGAAAGAGAAAACCAGTATACCCTAAGAAA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GTCACATCTCTCAGCAGCAGGCGGCAGGCGTCCCAGTGTCACGCCTaGGTCGCTAGTCTCCGATGGGTCTTGCCTGCCGACCACTGCGCT +
Preference number: 5 (lower is better)
Translates to: VTSLSSRRQASQCHA*VASLRWVLPADHCA
Trigger: AGCGCAGTGGTCGGCAGGCAAGACCCATCGGAGACTAGCGACTCAGGCGTGACACTGGGACGCCTGCCGCCTGCTGCTGAGAGATGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCTCAGCAGCCCGGATTaGCTCTCTTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GESFSREGSSRPLTLPTPLSSPD*LSSMES
Trigger: GCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCCTGCCAGTTCTCAGCTaGGCTCAGCAATTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GESFSREGSSRPLTLPTPLPVLS*AQQFLG
Trigger: GCCCAGGAATTGCTGAGCCAAGCTGAGAACTGGCAG...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp AGGCGTCCCAGTGTCACGCCTGAGTCGCTAGTCTCCGATGGGTCTTaGCTGCCGACCACTGCGCTCCCCTCGATGTCAAAAGGAAACGCA +
Preference number: 5 (lower is better)
Translates to: RRPSVTPESLVSDGS*LPTTALPSMSKGNA
Trigger: TGCGTTTCCTTTTGACATCGAGGGGAGCGCAGTGGTCGGCAGGCAAGACCCATCGGAGACTAGCGACTCAGGCGTGACACTGGGACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp GTCTATGCGCCGCAGCGCCAGAGGACACGCTCAGCAGCCCGGATTTaGTCTCTTCGATGGAGAGCGCTGCTAATCGCAGGTCATCGGTCA +
Preference number: 5 (lower is better)
Translates to: VYAPQRQRTRSAARI*SLRWRALLIAGHRS
Trigger: TGACCGATGACCTGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAGCGTGTCCTCTGGCGCTGCGGCGCATAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TGGCCCAGGCGCTGGTGGGCGTCCCCTCTCTCTGCTGCCTGTAGTTaGTTAACAGCATCATTCAGTCTGTCTCTGAGGGCGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: WPRRWWASPLSAACS*LTASFSLSLRAPFL
Trigger: GAGGAAGGGCGCCCTCAGAGACAGACTGAATGATGCTGTTAAGCAACTACAGGCAGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp GTTCTGAGGAGGTGGATGGTAGAGTTCATGTCGGTCACGTGTCTATaGGCCGCAGCGCCAGAGGACACGCTCAGCAGCCCGGATTTGCTC +
Preference number: 5 (lower is better)
Translates to: VLRRWMVEFMSVTCL*AAAPEDTLSSPDLL
Trigger: GAGCAAATCCGGGCTGCTGAGCGTGTCCTCTGGCGCTGCGGCGCATAGACACGTGACCGACATGAACTCTACCATCCACCTCCTCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TCCAGCTGCTCCAGCACCACGGGGAATAAAGAGCGGGTGTCATTGTaGAGCCGCTGCCAGTTCTCAGCTTGGCTCAGCAATTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SSCSSTTGNKERVSL*SRCQFSAWLSNSWA
Trigger: GGCCCAGGAATTGCTGAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGACACCCGCTCTTTATTCCCCGTGGTGCTGGAGCAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp ACAGCCGCTGTCGTCTTGTTAGCTTCCTCAATGAAGAGCTTGGACTaGCCCAGGCGCTGGTGGGCGTCCCCTCTCTCTGCTGCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: TAAVVLLASSMKSLD*PRRWWASPLSAACS
Trigger: ACTACAGGCAGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGCTAACAAGACGACAGCGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TCCAGCACCACGGGGAATAAAGAGCGGGTGTCATTGTGCAGCCGCTaGCAGTTCTCAGCTTGGCTCAGCAATTCCTGGGCCTCATCTGCC +
Preference number: 5 (lower is better)
Translates to: SSTTGNKERVSLCSR*QFSAWLSNSWASSA
Trigger: GGCAGATGAGGCCCAGGAATTGCTGAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGACACCCGCTCTTTATTCCCCGTGGTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCTGTGATCAACTGGCTTaGGATTCAACGGCCCAACTA +
Preference number: 5 (lower is better)
Translates to: GESFSREGSSRPLTLPTPCDQLA*DSTAQL
Trigger: TAGTTGGGCCGTTGAATCCAAAGCCAGTTGATCACA...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GCAGAAATGTTGCTTGCAGGCCGCTTCTGCTCCACAGTACGAAGCTaGTCCAGAAGCTGGGGGACAACCTCGGTGAGGTTTCTCACTGCG +
Preference number: 5 (lower is better)
Translates to: AEMLLAGRFCSTVRS*SRSWGTTSVRFLTA
Trigger: CGCAGTGAGAAACCTCACCGAGGTTGTCCCCCAGCTTCTGGATCAGCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp CTAGGCAGCCTGAGTAGCTGGGCAGGTTTAAGCTGGCAGGGAGCTTaGAGTTCGCAGGCACCCCACCAACGTAAAACACAGTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGSLSSWAGLSWQGA*SSQAPHQRKTQCPQ
Trigger: CTGAGGACACTGTGTTTTACGTTGGTGGGGTGCCTGCGAACTTCAAGCTCCCTGCCAGCTTAAACCTGCCCAGCTACTCAGGCTGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp GGGAATTGCCATTACAGTCACAGGGTGCACATTCTCCTGACAGTGTaGGGAAGAATCCAGCGTCACATCTCTCAGCAGCAGGCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GNCHYSHRVHILLTV*GRIQRHISQQQAAG
Trigger: GCCTGCCGCCTGCTGCTGAGAGATGTGACGCTGGATTCTTCCGCACACTGTCAGGAGAATGTGCACCCTGTGACTGTAATGGCAATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp GTCTTGTTAGCTTCCTCAATGAAGAGCTTGGACTGGCCCAGGCGCTaGTGGGCGTCCCCTCTCTCTGCTGCCTGTAGTTGCTTAACAGCA +
Preference number: 5 (lower is better)
Translates to: VLLASSMKSLDWPRR*WASPLSAACSCLTA
Trigger: TGCTGTTAAGCAACTACAGGCAGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGCTAACAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp GACAAACTGATCTGCTACCCAGGCCCCAGTGGGCTCTGCCGGCTTTaGAGGAGGCTTCATGTACAAGCTGATGGATGTGAAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DKLICYPGPSGLCRL*RRLHVQADGCEGLQ
Trigger: CTGAAGGCCTTCACATCCATCAGCTTGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGATCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TTTCTCATGTGCACGTTCAGGTATTCCCCGTTGACGCTGTGGCCATaGACAAGGGTTCCAGAACTGCTCCGGGGGCGGACTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: FLMCTFRYSPLTLWP*TRVPELLRGRTSKA
Trigger: TGCCTTTGAAGTCCGCCCCCGGAGCAGTTCTGGAACCCTTGTCCATGGCCACAGCGTCAACGGGGAATACCTGAACGTGCACATGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCTCATGGTCCCGCTGCTaGAAAGTGATGGCTCTATTC +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTSWSRC*KVMALF
Trigger: GAATAGAGCCATCACTTTCAAGCAGCGGGACCATGA...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCAAGTTCCTGTTTCCATaGGCCCTTCAAAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTKFLFP*ALQSKG
Trigger: CCCCTTGCTTTGAAGGGCCAATGGAAACAGGAACTT...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp GAGGTAGAGGACAAACTGATCTGCTACCCAGGCCCCAGTGGGCTCTaGCGGCTTTGGAGGAGGCTTCATGTACAAGCTGATGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: EVEDKLICYPGPSGL*RLWRRLHVQADGCE
Trigger: TTCACATCCATCAGCTTGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGATCAGTTTGTCCTCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TGGCCGTGCCGCCATATTGATAGGCATGTTCTATTGCCCTGGGGCTaGTGGAGAGGTGGCAGTGGGAATCTCTTGGAGCTTTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: WPCRHIDRHVLLPWG*WRGGSGNLLELSVP
Trigger: TGGAACAGAAAGCTCCAAGAGATTCCCACTGCCACCTCTCCAGCAGCCCCAGGGCAATAGAACATGCCTATCAATATGGCGGCACGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTGAGGTTACTCAGGTaGGATAGTTTTCCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTLRLLR*DSFPCS
Trigger: GCTGCAAGGAAAACTATCCAACCTGAGTAACCTCAG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCATCGGCTTCCTGTaGAAGATTGTATGCATGGTC +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTLIGFL*KIVCMV
Trigger: GACCATGCATACAATCTTCAACAGGAAGCCGATGAG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp AGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAATGTTGCTTaGAGGCCGCTTCTGCTCCACAGTACGAAGCTGATCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SNELSDPLDAGRNVA*RPLLLHSTKLIQKL
Trigger: CAGCTTCTGGATCAGCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp AGTCACCTGACCAAACTTCCCTCTCCTCGTGATGTCCCTCACCACTaGATAACTGGAGCCATCGAAGAAGTAGCTGGCAGCCCTACTCTG +
Preference number: 5 (lower is better)
Translates to: SHLTKLPSPRDVPHH*ITGAIEEVAGSPTL
Trigger: CAGAGTAGGGCTGCCAGCTACTTCTTCGATGGCTCCAGTTATGCAGTGGTGAGGGACATCACGAGGAGAGGGAAGTTTGGTCAGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCCTTGCAGCTCATTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTPCSSF*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAATGAGCTGCAAGG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp GGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTCCCGACCCCCATAAAACTTTGCCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: GESFSREGSSRPLTLPTPIKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGGCAAAGTTTTAT...GGGGGTCGGGAGGGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GCACTCATGGGAATTGCCATTACAGTCACAGGGTGCACATTCTCCTaGCAGTGTGCGGAAGAATCCAGCGTCACATCTCTCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ALMGIAITVTGCTFS*QCAEESSVTSLSSR
Trigger: CCTGCTGCTGAGAGATGTGACGCTGGATTCTTCCGCACACTGTCAGGAGAATGTGCACCCTGTGACTGTAATGGCAATTCCCATGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp CCCTCGAAGTCGGCTTTTGTCTACTACCAGTTCATATCTTGTGTCTaGGATGGAGGTGACCACGAAGTGGGGCAGCCCATCGTGGTACTG +
Preference number: 5 (lower is better)
Translates to: PSKSAFVYYQFISCV*DGGDHEVGQPIVVL
Trigger: CAGTACCACGATGGGCTGCCCCACTTCGTGGTCACCTCCATCTCAGACACAAGATATGAACTGGTAGTAGACAAAAGCCGACTTCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp CCTGTTTCCATTGGCCCTTCAAAGCAAGGGGTCACGCTAAACGTTTaGGAAGCGGAGGTGATGGAGGCACCATTGAGCTGGAGATTGCCA +
Preference number: 5 (lower is better)
Translates to: PVSIGPSKQGVTLNV*EAEVMEAPLSWRLP
Trigger: TGGCAATCTCCAGCTCAATGGTGCCTCCATCACCTCCGCTTCTCAAACGTTTAGCGTGACCCCTTGCTTTGAAGGGCCAATGGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp CAAAATCTCCTTGTTCGTGTTCAAACTCCTGGCGACTGTTGGCCGTaGCGCCATATTGATAGGCATGTTCTATTGCCCTGGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QNLLVRVQTPGDCWP*RHIDRHVLLPWGCW
Trigger: CCAGCAGCCCCAGGGCAATAGAACATGCCTATCAATATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGAACAAGGAGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TTCCGCTGGCAGTGCAGACAGAATCCGGAGCCATCCAAGCACTCATaGGAATTGCCATTACAGTCACAGGGTGCACATTCTCCTGACAGT +
Preference number: 5 (lower is better)
Translates to: FRWQCRQNPEPSKHS*ELPLQSQGAHSPDS
Trigger: ACTGTCAGGAGAATGTGCACCCTGTGACTGTAATGGCAATTCCCATGAGTGCTTGGATGGCTCCGGATTCTGTCTGCACTGCCAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGGCCTCTGACCCTTGCTGTTGATCTCTaGGATTTTGTCCCTCATGTT +
Preference number: 5 (lower is better)
Translates to: PLQPGESFSREGSSRPLTLAVDL*DFVPHV
Trigger: AACATGAGGGACAAAATCCAAGAGATCAACAGCAAG...GGTCAGAGGCCTGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TCCAGACATTTTTCACAGTGCTCTCCTGTTGTGTTCCGCTGGCAGTaGAGACAGAATCCGGAGCCATCCAAGCACTCATGGGAATTGCCA +
Preference number: 5 (lower is better)
Translates to: SRHFSQCSPVVFRWQ*RQNPEPSKHSWELP
Trigger: TGGCAATTCCCATGAGTGCTTGGATGGCTCCGGATTCTGTCTGCACTGCCAGCGGAACACAACAGGAGAGCACTGTGAAAAATGTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp CTCATGGTCCCGCTGCTTGAAAGTGATGGCTCTATTCATGTCTTCTaGATCCCTGACATGGTCGAGGGCCTGGTTAATGGATTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LMVPLLESDGSIHVF*IPDMVEGLVNGFLE
Trigger: CTCCAGGAATCCATTAACCAGGCCCTCGACCATGTCAGGGATGCAGAAGACATGAATAGAGCCATCACTTTCAAGCAGCGGGACCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp CTGATGGATGTGAAGGCCTTCAGGTCATCCACACTGACTTTGGGGTaGACTTCGACAGCTGACTGGCCATCAAACATCATGGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: LMDVKAFRSSTLTLG*TSTADWPSNIMETW
Trigger: CCAAGTCTCCATGATGTTTGATGGCCAGTCAGCTGTCGAAGTGCACCCCAAAGTCAGTGTGGATGACCTGAAGGCCTTCACATCCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp AGGGTATACTGGTTTTCTCTTTCTGACAGCCTTGTTCTGAGGAGGTaGATGGTAGAGTTCATGTCGGTCACGTGTCTATGCGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: RVYWFSLSDSLVLRR*MVEFMSVTCLCAAA
Trigger: CGCTGCGGCGCATAGACACGTGACCGACATGAACTCTACCATCCACCTCCTCAGAACAAGGCTGTCAGAAAGAGAAAACCAGTATACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp AAAGGTCTGCAGGTTCTGGGACCAGTTGCTGAGGTTGTTAGCCATTaGTGTGGTAACCTGTTGGACAGCCGCTGTCGTCTTGTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: KGLQVLGPVAEVVSH*CGNLLDSRCRLVSF
Trigger: GAAGCTAACAAGACGACAGCGGCTGTCCAACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCACACACTGCACAGTTCTaGGCTGTCCTGGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPHTAQF*AVLASP
Trigger: TGGAGACGCCAGGACAGCCAAGAACTGTGCAGTGTG...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp TCATGGAGACTTGGATCTTGCTTGCGACACTCCTGGTTTGAGCAATaGGCTCTCGGATCCTCTGGATGCTGGCAGAAATGTTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SWRLGSCLRHSWFEQ*ALGSSGCWQKCCLQ
Trigger: CTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGCAAGCAAGATCCAAGTCTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GGCTTTTGTCTACTACCAGTTCATATCTTGTGTCTGAGATGGAGGTaGCCACGAAGTGGGGCAGCCCATCGTGGTACTGCTTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GFCLLPVHILCLRWR*PRSGAAHRGTACLL
Trigger: CAACAGACAAGCAGTACCACGATGGGCTGCCCCACTTCGTGGTCACCTCCATCTCAGACACAAGATATGAACTGGTAGTAGACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp CGAGCAGAGTCCACTGCAGTGTTATATGCAGATGAGTCAAAGGTCTaGAGGTTCTGGGACCAGTTGCTGAGGTTGTTAGCCATTGGTGTG +
Preference number: 5 (lower is better)
Translates to: RAESTAVLYADESKV*RFWDQLLRLLAIGV
Trigger: CACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGCATATAACACTGCAGTGGACTCTGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TTCAGGTCATCCACACTGACTTTGGGGTGCACTTCGACAGCTGACTaGCCATCAAACATCATGGAGACTTGGATCTTGCTTGCGACACTC +
Preference number: 5 (lower is better)
Translates to: FRSSTLTLGCTSTAD*PSNIMETWILLATL
Trigger: GAGTGTCGCAAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAGCTGTCGAAGTGCACCCCAAAGTCAGTGTGGATGACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TTTCACCAAAATCTCCTTGTTCGTGTTCAAACTCCTGGCGACTGTTaGCCGTGCCGCCATATTGATAGGCATGTTCTATTGCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FHQNLLVRVQTPGDC*PCRHIDRHVLLPWG
Trigger: GCCCCAGGGCAATAGAACATGCCTATCAATATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGAACAAGGAGATTTTGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAATGCTGGCAGAAATGTaGCTTGCAGGCCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPMLAEM*LAGRFC
Trigger: GCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCAT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGATAGGCATGTTCTATaGCCCTGGGGCTGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPDRHVL*PWGCWR
Trigger: TCTCCAGCAGCCCCAGGGCAATAGAACATGCCTATC...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GTATCCATGCTTTCCTTCTCAACCAGCATACCCTTTCTTGAGGCTTaGCTTCCCTTCTCATGGAGTCCCTCTACATCAGGCAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: VSMLSFSTSIPFLEA*LPFSWSPSTSGRRL
Trigger: AAGCCTCCTGCCTGATGTAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp TTTCTATGTCAAAGCGAGTCACCTGACCAAACTTCCCTCTCCTCGTaGTGTCCCTCACCACTGCATAACTGGAGCCATCGAAGAAGTAGC +
Preference number: 5 (lower is better)
Translates to: FLCQSESPDQTSLSS*CPSPLHNWSHRRSS
Trigger: GCTACTTCTTCGATGGCTCCAGTTATGCAGTGGTGAGGGACATCACGAGGAGAGGGAAGTTTGGTCAGGTGACTCGCTTTGACATAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TGCTTGAAAGTGATGGCTCTATTCATGTCTTCTGCATCCCTGACATaGTCGAGGGCCTGGTTAATGGATTCCTGGAGGTCGGACAGCTTA +
Preference number: 5 (lower is better)
Translates to: CLKVMALFMSSASLT*SRAWLMDSWRSDSL
Trigger: TAAGCTGTCCGACCTCCAGGAATCCATTAACCAGGCCCTCGACCATGTCAGGGATGCAGAAGACATGAATAGAGCCATCACTTTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAGGAGCACAAGGCCATaGTCAGCTGGTGTTCGGATT +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPRSTRP*SAGVRI
Trigger: AATCCGAACACCAGCTGACAATGGCCTTGTGCTCCT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GTCAGTAAAGACTCTGGAACACCTCCAACAAACACAGGCTCCCTGTaGTCAACTGGCTTTGGATTCAACGGCCCAACTACATGGTTCACT +
Preference number: 5 (lower is better)
Translates to: VSKDSGTPPTNTGSL*STGFGFNGPTTWFT
Trigger: AGTGAACCATGTAGTTGGGCCGTTGAATCCAAAGCCAGTTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAGAGTCTTTACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp TCCACTGCAGTGTTATATGCAGATGAGTCAAAGGTCTGCAGGTTCTaGGACCAGTTGCTGAGGTTGTTAGCCATTGGTGTGGTAACCTGT +
Preference number: 5 (lower is better)
Translates to: STAVLYADESKVCRF*DQLLRLLAIGVVTC
Trigger: ACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGCATATAACACTGCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTCAAAAGGAAACGCATaGCCGTCCCCTGACGCTGCG +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCSKGNA*PSPDAA
Trigger: CGCAGCGTCAGGGGACGGCAATGCGTTTCCTTTTGA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCACAGTGCTCTCCTGTaGTGTTCCGCTGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAHSALL*CSAGSA
Trigger: TGCACTGCCAGCGGAACACAACAGGAGAGCACTGTG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAGCACAGCGTTCACACTaGAATCCGGTGGTATTTCGT +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPAQRSH*NPVVFR
Trigger: ACGAAATACCACCGGATTCAAGTGTGAACGCTGTGC...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTAAAGAGCGGGTGTCATaGTGCAGCCGCTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCKERVS*CSRCQF
Trigger: GAACTGGCAGCGGCTGCACAATGACACCCGCTCTTT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTGCGACACTCCTGGTTaGAGCAATGAGCTCTCGGAT +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCCDTPG*SNELSD
Trigger: ATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGCA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCCAGGAGCTCACAGGCTaGGAATCCAGGAGAATTTCC +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCQELTG*ESRRIS
Trigger: GGAAATTCTCCTGGATTCCAAGCCTGTGAGCTCCTG...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCGTGATGGAGGCACCATaGAGCTGGAGATTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSVMEAP*SWRLPR
Trigger: CCTTGGCAATCTCCAGCTCAATGGTGCCTCCATCAC...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp GTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATACCCTTTCTTaGGGCTTGACTTCCCTTCTCATGGAGTCCCTCTACATCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VNCIHAFLLNQHTLS*GLTSLLMESLYIRQ
Trigger: CTGCCTGATGTAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TGTGGGCTTGCTCGACAAGATGGGTTGCTTGGTCAATTGTATCCATaGTTTCCTTCTCAACCAGCATACCCTTTCTTGAGGCTTGACTTC +
Preference number: 5 (lower is better)
Translates to: CGLARQDGLLGQLYP*FPSQPAYPFLRLDF
Trigger: GAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp CTCATCAAGTTCCTCAAGAGTGAGCTGAGGTATGGTAAGAGAGTCTaGAGACATACTCAGAGAGGCACCCACAACTTCCATCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LIKFLKSELRYGKRV*RHTQRGTHNFHLFL
Trigger: AAGGAACAGATGGAAGTTGTGGGTGCCTCTCTGAGTATGTCTGCAGACTCTCTTACCATACCTCAGCTCACTCTTGAGGAACTTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp AAGCCTTCTGTACCAGCCCGTTCATGTCTGAACTGTGCAAATTTCTaGTTAGCTCATCGGCTTCCTGTTGAAGATTGTATGCATGGTCCG +
Preference number: 5 (lower is better)
Translates to: KPSVPARSCLNCANF*LAHRLPVEDCMHGP
Trigger: CGGACCATGCATACAATCTTCAACAGGAAGCCGATGAGCTAAGCAGAAATTTGCACAGTTCAGACATGAACGGGCTGGTACAGAAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp AACCACATAGCCGCCTTCTGTGGAAAAATAAGTTCCTGTTTCCATTaGCCCTTCAAAGCAAGGGGTCACGCTAAACGTTTGAGAAGCGGA +
Preference number: 5 (lower is better)
Translates to: NHIAAFCGKISSCFH*PFKARGHAKRLRSG
Trigger: TCCGCTTCTCAAACGTTTAGCGTGACCCCTTGCTTTGAAGGGCCAATGGAAACAGGAACTTATTTTTCCACAGAAGGCGGCTATGTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAAGCACTCATGGGAATaGCCATTACAGTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPKHSWE*PLQSQG
Trigger: ACCCTGTGACTGTAATGGCAATTCCCATGAGTGCTT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGGTTCTGGGACCAGTaGCTGAGGTTGTTAGCCATT +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCRFWDQ*LRLLAI
Trigger: AATGGCTAACAACCTCAGCAACTGGTCCCAGAACCT...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTGGCAGAAATGTTGCTaGCAGGCCGCTTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCWQKCC*QAASAP
Trigger: TGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCCA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAAGTCTCTGACACCGTaGTTGACCTTCACTATGACC +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPKSLTP*LTFTMT
Trigger: GGTCATAGTGAAGGTCAACAACGGTGTCAGAGACTT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TTGGATTTTGTCCCTCATGTTGTGGGCTTGCTCGACAAGATGGGTTaGTTGGTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATACC +
Preference number: 5 (lower is better)
Translates to: LDFVPHVVGLLDKMG*LVNCIHAFLLNQHT
Trigger: GGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp ATCTCTTGGATTTTGTCCCTCATGTTGTGGGCTTGCTCGACAAGATaGGTTGCTTGGTCAATTGTATCCATGCTTTCCTTCTCAACCAGC +
Preference number: 5 (lower is better)
Translates to: ISWILSLMLWACSTR*VAWSIVSMLSFSTS
Trigger: GCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp AAACATACTGCCATTGACCATCAGGAGCACAAGGCCATTGTCAGCTaGTGTTCGGATTTCTATGTCAAAGCGAGTCACCTGACCAAACTT +
Preference number: 5 (lower is better)
Translates to: KHTAIDHQEHKAIVS*CSDFYVKASHLTKL
Trigger: AAGTTTGGTCAGGTGACTCGCTTTGACATAGAAATCCGAACACCAGCTGACAATGGCCTTGTGCTCCTGATGGTCAATGGCAGTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATTGATCTCTTGGATTTaGTCCCTCATGTTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPLISWI*SLMLWA
Trigger: AGCCCACAACATGAGGGACAAAATCCAAGAGATCAA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCGCTCTGCCTTCCCTTTaGTTGGATTCTTCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSALPSL*LDSSLE
Trigger: TTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGC...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGGTCACGCTAAACGTTaGAGAAGCGGAGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAGHAKR*RSGGDG
Trigger: TCCATCACCTCCGCTTCTCAAACGTTTAGCGTGACC...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCTCTGACACCGTTGTaGACCTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSLTPL*TFTMTC
Trigger: ACAGGTCATAGTGAAGGTCAACAACGGTGTCAGAGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATCACAGAGATTCTGCTaGGGAGTTACTGAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPSQRFC*GVTEVE
Trigger: TTCTACCTCAGTAACTCCCAAGCAGAATCTCTGTGA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp AATTCTGTGCCATCTGCCATCACAGAGATTCTGCTTGGGAGTTACTaGGGTAGAAAAGTCTCTGACACCGTTGTTGACCTTCACTATGAC +
Preference number: 5 (lower is better)
Translates to: NSVPSAITEILLGSY*GRKVSDTVVDLHYD
Trigger: GTCATAGTGAAGGTCAACAACGGTGTCAGAGACTTTTCTACCTCAGTAACTCCCAAGCAGAATCTCTGTGATGGCAGATGGCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp ATCTTGCTGTTGATCTCTTGGATTTTGTCCCTCATGTTGTGGGCTTaGTCGACAAGATGGGTTGCTTGGTCAATTGTATCCATGCTTTCC +
Preference number: 5 (lower is better)
Translates to: ILLLISWILSLMLWA*STRWVAWSIVSMLS
Trigger: GGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGATCAACAGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp ATTTTGTCCCTCATGTTGTGGGCTTGCTCGACAAGATGGGTTGCTTaGTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATACCCTTT +
Preference number: 5 (lower is better)
Translates to: ILSLMLWACSTRWVA*SIVSMLSFSTSIPF
Trigger: AAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTCTTCAAAGATCAGGTaGGGATCCGAATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCSSKIR*GSEFPL
Trigger: CAGTGGAAATTCGGATCCCAACCTGATCTTTGAAGA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCCAGCATACCCTTTCTaGAGGCTTGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAPAYPF*RLDFPS
Trigger: AGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCATTTTGTCCCTCATGTaGTGGGCTTGCTCGACAAGA +
Preference number: 5 (lower is better)
Translates to: HYYVYFSVRKSCLQQPCSILSLM*WACSTR
Trigger: TCTTGTCGAGCAAGCCCACAACATGAGGGACAAAAT...GCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCTTCACTCTCTCATGTaGTTTCTCATGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAALHSLM*FLMVPL
Trigger: CAGCGGGACCATGAGAAACAACATGAGAGAGTGAAG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCTGCAGCTCTCTGGCTaGATTGAGAAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAALQLSG*IEKVVT
Trigger: AGTGACAACCTTCTCAATCAAGCCAGAGAGCTGCAG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAAACATCATGGAGACTaGGATCTTGCTTGCGACACT +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCKHHGD*DLACDT
Trigger: AGTGTCGCAAGCAAGATCCAAGTCTCCATGATGTTT...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCCATCGTGGTACTGCTaGTCTGTTGACATGACCTTG +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAPSWYC*SVDMTL
Trigger: CAAGGTCATGTCAACAGACAAGCAGTACCACGATGG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCTTCTTCTCAGTTGTTaGAGTCTGCTCTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCLLLSC*SLLCLP
Trigger: GGGAAGGCAGAGCAGACTCAAACAACTGAGAAGAAG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTGGCAGTGGGAATCTCTaGGAGCTTTCTGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCGSGNL*ELSVPE
Trigger: TTCTGGAACAGAAAGCTCCAAGAGATTCCCACTGCC...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCATGCCACAATCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPCHNPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGATTGTGGCA...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp GAACTTCTTCTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTTGTTaGATTCTTCCCTCGAAGTCGGCTTTTGTCTACTACCAGTTCATA +
Preference number: 5 (lower is better)
Translates to: ELLLSCLSLLCLPFC*ILPSKSAFVYYQFI
Trigger: TATGAACTGGTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAGAAGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTATGCACCCCCTAAAGTaGATATCTAGGGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCMHPLK*ISRGRC
Trigger: ACACCTTCCCCTAGATATCAACTTTAGGGGGTGCAT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 90 bp TCTCTAATAACTGTAATTCTGTGCCATCTGCCATCACAGAGATTCTaGTTGGGAGTTACTGAGGTAGAAAAGTCTCTGACACCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLITVILCHLPSQRF*LGVTEVEKSLTPLL
Trigger: CAACAACGGTGTCAGAGACTTTTCTACCTCAGTAACTCCCAAGCAGAATCTCTGTGATGGCAGATGGCACAGAATTACAGTTATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCCCATGTATTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAAPMYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAATACATGGG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TTTATTGAAATCCCCTTCAACCAGGTGAGAGCTTCAGTAGGGAGGGGAGTTCCAAGAATAGTAACCCATTaGGCTGTAATGTTCGGAAAT +
Preference number: 5 (lower is better)
Translates to: FIEIPFNQVRASVGRGVPRIVTH*AVMFGN
Trigger: ATTTCCGAACATTACAGCCAAATGGGTTACTATTCT...TGGAACTCCCCTCCCTACTGAAGCTCTCACCTGGTTGAAGGGGATTTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp ATTGCTTATACATCCAGTGAAATTAGCATACTGAGGACTGATGGGTaGGCCACCAAAGTAGAACTTCTTCTCAGTTGTTTGAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: IAYTSSEISILRTDG*ATKVELLLSCLSLL
Trigger: GAGCAGACTCAAACAACTGAGAAGAAGTTCTACTTTGGTGGCTCACCCATCAGTCCTCAGTATGCTAATTTCACTGGATGTATAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 90 bp TTCAACGGCCCAACTACATGGTTCACTTCTGAGTCTACATCCAACTaGACCACGTTTGAATCTCTAATAACTGTAATTCTGTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: FNGPTTWFTSESTSN*TTFESLITVILCHL
Trigger: CAGATGGCACAGAATTACAGTTATTAGAGATTCAAACGTGGTTCAGTTGGATGTAGACTCAGAAGTGAACCATGTAGTTGGGCCGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 90 bp AGTGTGTTCTCCGAGTTGTTTATCTGTATCTTTCTTAGGGTATACTaGTTTTCTCTTTCTGACAGCCTTGTTCTGAGGAGGTGGATGGTA +
Preference number: 5 (lower is better)
Translates to: SVFSELFICIFLRVY*FSLSDSLVLRRWMV
Trigger: TACCATCCACCTCCTCAGAACAAGGCTGTCAGAAAGAGAAAACCAGTATACCCTAAGAAAGATACAGATAAACAACTCGGAGAACACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp CCCCACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCTATTTTCATAGACGTTaGATGCATCCAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PHYYVYFSVRKSCLQQPCYFHRR*MHPKPS
Trigger: AGAAGGCTTTGGATGCATCAAACGTCTATGAAAATA...GCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTCACAGGGCACTGACTTaGATGGATCCATATTATAGA +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCHRALT*MDPYYR
Trigger: TCTATAATATGGATCCATCAAAGTCAGTGCCCTGTG...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp ACTACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTCTCTTCTCTCCCTGTTaGTTTGTTTTAGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TTMFISVLGRAVFSSLAALFSPC*FVLGFE
Trigger: CTCAAAGCCTAAAACAAACAAACAGGGAGAGAAGAG...AGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTTTCACCAAAATCTCCTaGTTCGTGTTCAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCFTKIS*FVFKLL
Trigger: CAGGAGTTTGAACACGAACAAGGAGATTTTGGTGAA...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS-3UTR CAA 90 bp TACTATGTTTATTTCAGTGTTAGGAAGAGCTGTCTTCAGCAGCCTTGCAGCTGTACCAGGTTATCATTTTaGATTGCCAGACCCATGTAT +
Preference number: 5 (lower is better)
Translates to: YYVYFSVRKSCLQQPCSCTRLSF*IARPMY
Trigger: ATACATGGGTCTGGCAATCAAAAATGATAACCTGGT...ACAGCTGCAAGGCTGCTGAAGACAGCTCTTCCTAACACTGAAATAAACATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CTCAGCAGCAGGCGGCAGGCGTCCCAGTGTCACGCCTaGGTCGCTAGTCTCCGATGGGTCTTGCCTGCCGAC +
Preference number: 6 (lower is better)
Translates to: LSSRRQASQCHA*VASLRWVLPAD
Trigger: GTCGGCAGGCAAGACCCATCGGAGACTAGCGACTCAGGCGTGACACTGGGACGCCTGCCGCCTGCTGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GCCGCAGCGCCAGAGGACACGCTCAGCAGCCCGGATTaGCTCTCTTCGATGGAGAGCGCTGCTAATCGCAGG +
Preference number: 6 (lower is better)
Translates to: AAAPEDTLSSPD*LSSMESAANRR
Trigger: CCTGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAGCGTGTCCTCTGGCGCTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CCGCAGCGCCAGAGGACACGCTCAGCAGCCCGGATTTaGTCTCTTCGATGGAGAGCGCTGCTAATCGCAGGT +
Preference number: 6 (lower is better)
Translates to: PQRQRTRSAARI*SLRWRALLIAG
Trigger: ACCTGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAGCGTGTCCTCTGGCGCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GCTTCCTCAATGAAGAGCTTGGACTGGCCCAGGCGCTaGTGGGCGTCCCCTCTCTCTGCTGCCTGTAGTTGC +
Preference number: 6 (lower is better)
Translates to: ASSMKSLDWPRR*WASPLSAACSC
Trigger: GCAACTACAGGCAGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TGTCTATGCGCCGCAGCGCCAGAGGACACGCTCAGCAGCCCGGATTaGCTCTCTTCGATGGAGAGCGCTGCTAATCGCAGGTCATCGGTC +
Preference number: 6 (lower is better)
Translates to: CLCAAAPEDTLSSPD*LSSMESAANRRSSV
Trigger: GACCGATGACCTGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAGCGTGTCCTCTGGCGCTGCGGCGCATAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TGTTGGACAGCCGCTGTCGTCTTGTTAGCTTCCTCAATGAAGAGCTaGGACTGGCCCAGGCGCTGGTGGGCGTCCCCTCTCTCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: CWTAAVVLLASSMKS*DWPRRWWASPLSAA
Trigger: GGCAGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGCTAACAAGACGACAGCGGCTGTCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp TGCACGTTCAGGTATTCCCCGTTGACGCTGTGGCCATaGACAAGGGTTCCAGAACTGCTCCGGGGGCGGACT +
Preference number: 6 (lower is better)
Translates to: CTFRYSPLTLWP*TRVPELLRGRT
Trigger: AGTCCGCCCCCGGAGCAGTTCTGGAACCCTTGTCCATGGCCACAGCGTCAACGGGGAATACCTGAACGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp GTCGCTAGTCTCCGATGGGTCTTGCCTGCCGACCACTaGGCTCCCCTCGATGTCAAAAGGAAACGCATTGCC +
Preference number: 6 (lower is better)
Translates to: VASLRWVLPADH*APLDVKRKRIA
Trigger: GGCAATGCGTTTCCTTTTGACATCGAGGGGAGCGCAGTGGTCGGCAGGCAAGACCCATCGGAGACTAGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp GGCGTTTTTGCTTCCGAGGTAGAGGACAAACTGATCTaGTACCCAGGCCCCAGTGGGCTCTGCCGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: GVFASEVEDKLI*YPGPSGLCRLW
Trigger: CCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGATCAGTTTGTCCTCTACCTCGGAAGCAAAAACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GTCGTCTTGTTAGCTTCCTCAATGAAGAGCTTGGACTaGCCCAGGCGCTGGTGGGCGTCCCCTCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: VVLLASSMKSLD*PRRWWASPLSA
Trigger: AGCAGAGAGAGGGGACGCCCACCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGCTAACAAGACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TGCTCCAGCACCACGGGGAATAAAGAGCGGGTGTCATaGTGCAGCCGCTGCCAGTTCTCAGCTTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: CSSTTGNKERVS*CSRCQFSAWLS
Trigger: GCTGAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGACACCCGCTCTTTATTCCCCGTGGTGCTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TCGTCCAGCTGCTCCAGCACCACGGGGAATAAAGAGCGGGTGTCATaGTGCAGCCGCTGCCAGTTCTCAGCTTGGCTCAGCAATTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSSCSSTTGNKERVS*CSRCQFSAWLSNSW
Trigger: CCAGGAATTGCTGAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGACACCCGCTCTTTATTCCCCGTGGTGCTGGAGCAGCTGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TACGAAGCTGATCCAGAAGCTGGGGGACAACCTCGGTaGGGTTTCTCACTGCGTCCCGAGCAGAGTCCACTG +
Preference number: 6 (lower is better)
Translates to: YEADPEAGGQPR*GFSLRPEQSPL
Trigger: CAGTGGACTCTGCTCGGGACGCAGTGAGAAACCTCACCGAGGTTGTCCCCCAGCTTCTGGATCAGCTTCGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp ACGGGGAATAAAGAGCGGGTGTCATTGTGCAGCCGCTaGCAGTTCTCAGCTTGGCTCAGCAATTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TGNKERVSLCSR*QFSAWLSNSWA
Trigger: GGCCCAGGAATTGCTGAGCCAAGCTGAGAACTGGCAGCGGCTGCACAATGACACCCGCTCTTTATTCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CGCTGGTGGGCGTCCCCTCTCTCTGCTGCCTGTAGTTaGTTAACAGCATCATTCAGTCTGTCTCTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: RWWASPLSAACS*LTASFSLSLRA
Trigger: CGCCCTCAGAGACAGACTGAATGATGCTGTTAAGCAACTACAGGCAGCAGAGAGAGGGGACGCCCACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp TGCCTCCTCATCCACCAGCTCCCGATGGGTGAGGAATaGCTGCCGGCTTCGGATCTCTTCCAGCATTTTCTG +
Preference number: 6 (lower is better)
Translates to: CLLIHQLPMGEE*LPASDLFQHFL
Trigger: CAGAAAATGCTGGAAGAGATCCGAAGCCGGCAGCCATTCCTCACCCATCGGGAGCTGGTGGATGAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GGTAGAGGACAAACTGATCTGCTACCCAGGCCCCAGTaGGCTCTGCCGGCTTTGGAGGAGGCTTCATGTACA +
Preference number: 6 (lower is better)
Translates to: GRGQTDLLPRPQ*ALPALEEASCT
Trigger: TGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGATCAGTTTGTCCTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TTGCTTGCAGGCCGCTTCTGCTCCACAGTACGAAGCTaGTCCAGAAGCTGGGGGACAACCTCGGTGAGGTTT +
Preference number: 6 (lower is better)
Translates to: LLAGRFCSTVRS*SRSWGTTSVRF
Trigger: AAACCTCACCGAGGTTGTCCCCCAGCTTCTGGATCAGCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp GACAAACTGATCTGCTACCCAGGCCCCAGTGGGCTCTaGCGGCTTTGGAGGAGGCTTCATGTACAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: DKLICYPGPSGL*RLWRRLHVQAD
Trigger: ATCAGCTTGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGATCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AGGACACGCTCAGCAGCCCGGATTTGCTCTCTTCGATaGAGAGCGCTGCTAATCGCAGGTCATCGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: RTRSAARICSLR*RALLIAGHRSS
Trigger: ACTTGACCGATGACCTGCGATTAGCAGCGCTCTCCATCGAAGAGAGCAAATCCGGGCTGCTGAGCGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp ATCTGCTACCCAGGCCCCAGTGGGCTCTGCCGGCTTTaGAGGAGGCTTCATGTACAAGCTGATGGATGTGAA +
Preference number: 6 (lower is better)
Translates to: ICYPGPSGLCRL*RRLHVQADGCE
Trigger: TTCACATCCATCAGCTTGTACATGAAGCCTCCTCCAAAGCCGGCAGAGCCCACTGGGGCCTGGGTAGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GGGCGGCTGTCAATTACAAAGTGGCGGATGCAGCCGGTGAAGGGTTaGCTGGGAGCCAAACGTGGTGTCAGTAAAGACTCTGGAACACCT +
Preference number: 6 (lower is better)
Translates to: GRLSITKWRMQPVKG*LGAKRGVSKDSGTP
Trigger: AGGTGTTCCAGAGTCTTTACTGACACCACGTTTGGCTCCCAGCAAACCCTTCACCGGCTGCATCCGCCACTTTGTAATTGACAGCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp GACAGGGGCACGGCTGGCAGAACCGGGGTGTGCCTCTaGTGGAGTCTCCAATATAGCCATCCAGACATTTTT +
Preference number: 6 (lower is better)
Translates to: DRGTAGRTGVCL*WSLQYSHPDIF
Trigger: AAAAATGTCTGGATGGCTATATTGGAGACTCCATCAGAGGCACACCCCGGTTCTGCCAGCCGTGCCCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CTGAGTAGCTGGGCAGGTTTAAGCTGGCAGGGAGCTTaGAGTTCGCAGGCACCCCACCAACGTAAAACACAG +
Preference number: 6 (lower is better)
Translates to: LSSWAGLSWQGA*SSQAPHQRKTQ
Trigger: CTGTGTTTTACGTTGGTGGGGTGCCTGCGAACTTCAAGCTCCCTGCCAGCTTAAACCTGCCCAGCTACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CTCTCGGATCCTCTGGATGCTGGCAGAAATGTTGCTTaGAGGCCGCTTCTGCTCCACAGTACGAAGCTGATC +
Preference number: 6 (lower is better)
Translates to: LSDPLDAGRNVA*RPLLLHSTKLI
Trigger: GATCAGCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AATGGCTGCCGGCTTCGGATCTCTTCCAGCATTTTCTaGGCCAACACCAGCTTCTCAGCTATTTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: NGCRLRISSSIF*ANTSFSAISSG
Trigger: CCCCGAGGAAATAGCTGAGAAGCTGGTGTTGGCCCAGAAAATGCTGGAAGAGATCCGAAGCCGGCAGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GCTCTCGGATCCTCTGGATGCTGGCAGAAATGTTGCTaGCAGGCCGCTTCTGCTCCACAGTACGAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: ALGSSGCWQKCC*QAASAPQYEAD
Trigger: ATCAGCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp ATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAATGTaGCTTGCAGGCCGCTTCTGCTCCACAGTACGAAGC +
Preference number: 6 (lower is better)
Translates to: MSSRILWMLAEM*LAGRFCSTVRS
Trigger: GCTTCGTACTGTGGAGCAGAAGCGGCCTGCAAGCAACATTTCTGCCAGCATCCAGAGGATCCGAGAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GTGACCACGAAGTGGGGCAGCCCATCGTGGTACTGCTaGTCTGTTGACATGACCTTGATGCCCTTTACGTCC +
Preference number: 6 (lower is better)
Translates to: VTTKWGSPSWYC*SVDMTLMPFTS
Trigger: GGACGTAAAGGGCATCAAGGTCATGTCAACAGACAAGCAGTACCACGATGGGCTGCCCCACTTCGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TTCAAACTCCTGGCGACTGTTGGCCGTGCCGCCATATaGATAGGCATGTTCTATTGCCCTGGGGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: FKLLATVGRAAI*IGMFYCPGAAG
Trigger: TCCAGCAGCCCCAGGGCAATAGAACATGCCTATCAATATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TGGCAGTGCAGACAGAATCCGGAGCCATCCAAGCACTCATGGGAATaGCCATTACAGTCACAGGGTGCACATTCTCCTGACAGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: WQCRQNPEPSKHSWE*PLQSQGAHSPDSVR
Trigger: CCGCACACTGTCAGGAGAATGTGCACCCTGTGACTGTAATGGCAATTCCCATGAGTGCTTGGATGGCTCCGGATTCTGTCTGCACTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TTGTTAGCCATTGGTGTGGTAACCTGTTGGACAGCCGCTGTCGTCTaGTTAGCTTCCTCAATGAAGAGCTTGGACTGGCCCAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LLAIGVVTCWTAAVV*LASSMKSLDWPRRW
Trigger: CCAGCGCCTGGGCCAGTCCAAGCTCTTCATTGAGGAAGCTAACAAGACGACAGCGGCTGTCCAACAGGTTACCACACCAATGGCTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CAAAGCGAGTCACCTGACCAAACTTCCCTCTCCTCGTaGTGTCCCTCACCACTGCATAACTGGAGCCATCGA +
Preference number: 6 (lower is better)
Translates to: QSESPDQTSLSS*CPSPLHNWSHR
Trigger: TCGATGGCTCCAGTTATGCAGTGGTGAGGGACATCACGAGGAGAGGGAAGTTTGGTCAGGTGACTCGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp ATTGGCCCTTCAAAGCAAGGGGTCACGCTAAACGTTTaGGAAGCGGAGGTGATGGAGGCACCATTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: IGPSKQGVTLNV*EAEVMEAPLSW
Trigger: CCAGCTCAATGGTGCCTCCATCACCTCCGCTTCTCAAACGTTTAGCGTGACCCCTTGCTTTGAAGGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp ACCAAACTTCCCTCTCCTCGTGATGTCCCTCACCACTaGATAACTGGAGCCATCGAAGAAGTAGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: TKLPSPRDVPHH*ITGAIEEVAGS
Trigger: GCTGCCAGCTACTTCTTCGATGGCTCCAGTTATGCAGTGGTGAGGGACATCACGAGGAGAGGGAAGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp CAGGTTCTGGGACCAGTTGCTGAGGTTGTTAGCCATTaGTGTGGTAACCTGTTGGACAGCCGCTGTCGTCTT +
Preference number: 6 (lower is better)
Translates to: QVLGPVAEVVSH*CGNLLDSRCRL
Trigger: AAGACGACAGCGGCTGTCCAACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp CATGGAGACTTGGATCTTGCTTGCGACACTCCTGGTTaGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: HGDLDLACDTPG*SNELSDPLDAG
Trigger: GCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGCAAGCAAGATCCAAGTCTCCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp CATTGGCCCTTCAAAGCAAGGGGTCACGCTAAACGTTaGAGAAGCGGAGGTGATGGAGGCACCATTGAGCTG +
Preference number: 6 (lower is better)
Translates to: HWPFKARGHAKR*RSGGDGGTIEL
Trigger: CAGCTCAATGGTGCCTCCATCACCTCCGCTTCTCAAACGTTTAGCGTGACCCCTTGCTTTGAAGGGCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GAGATGGAGGTGACCACGAAGTGGGGCAGCCCATCGTGGTACTGCTaGTCTGTTGACATGACCTTGATGCCCTTTACGTCCATGACAACA +
Preference number: 6 (lower is better)
Translates to: EMEVTTKWGSPSWYC*SVDMTLMPFTSMTT
Trigger: TGTTGTCATGGACGTAAAGGGCATCAAGGTCATGTCAACAGACAAGCAGTACCACGATGGGCTGCCCCACTTCGTGGTCACCTCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TCCTGTTTCCATTGGCCCTTCAAAGCAAGGGGTCACGCTAAACGTTaGAGAAGCGGAGGTGATGGAGGCACCATTGAGCTGGAGATTGCC +
Preference number: 6 (lower is better)
Translates to: SCFHWPFKARGHAKR*RSGGDGGTIELEIA
Trigger: GGCAATCTCCAGCTCAATGGTGCCTCCATCACCTCCGCTTCTCAAACGTTTAGCGTGACCCCTTGCTTTGAAGGGCCAATGGAAACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp ATGGAGACTTGGATCTTGCTTGCGACACTCCTGGTTTaGGCAATGAGCTCTCGGATCCTCTGGATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: METWILLATLLV*AMSSRILWMLA
Trigger: TGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGCAAGCAAGATCCAAGTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp GCTGGTGTTCGGATTTCTATGTCAAAGCGAGTCACCTaGCCAAACTTCCCTCTCCTCGTGATGTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: AGVRISMSKRVT*PNFPLLVMSLT
Trigger: GGTGAGGGACATCACGAGGAGAGGGAAGTTTGGTCAGGTGACTCGCTTTGACATAGAAATCCGAACACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CTACTACCAGTTCATATCTTGTGTCTGAGATGGAGGTaGCCACGAAGTGGGGCAGCCCATCGTGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: LLPVHILCLRWR*PRSGAAHRGTA
Trigger: AGCAGTACCACGATGGGCTGCCCCACTTCGTGGTCACCTCCATCTCAGACACAAGATATGAACTGGTAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CATTACAGTCACAGGGTGCACATTCTCCTGACAGTGTaGGGAAGAATCCAGCGTCACATCTCTCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: HYSHRVHILLTV*GRIQRHISQQQ
Trigger: CTGCTGCTGAGAGATGTGACGCTGGATTCTTCCGCACACTGTCAGGAGAATGTGCACCCTGTGACTGTAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CTTGTTCGTGTTCAAACTCCTGGCGACTGTTGGCCGTaGCGCCATATTGATAGGCATGTTCTATTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LVRVQTPGDCWP*RHIDRHVLLPW
Trigger: CCAGGGCAATAGAACATGCCTATCAATATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AGACATTTTTCACAGTGCTCTCCTGTTGTGTTCCGCTaGCAGTGCAGACAGAATCCGGAGCCATCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: RHFSQCSPVVFR*QCRQNPEPSKH
Trigger: GTGCTTGGATGGCTCCGGATTCTGTCTGCACTGCCAGCGGAACACAACAGGAGAGCACTGTGAAAAATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GTGATGGCTCTATTCATGTCTTCTGCATCCCTGACATaGTCGAGGGCCTGGTTAATGGATTCCTGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: VMALFMSSASLT*SRAWLMDSWRS
Trigger: CGACCTCCAGGAATCCATTAACCAGGCCCTCGACCATGTCAGGGATGCAGAAGACATGAATAGAGCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp CTGGGACCAGTTGCTGAGGTTGTTAGCCATTGGTGTGGTAACCTGTaGGACAGCCGCTGTCGTCTTGTTAGCTTCCTCAATGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LGPVAEVVSHWCGNL*DSRCRLVSFLNEEL
Trigger: AAGCTCTTCATTGAGGAAGCTAACAAGACGACAGCGGCTGTCCAACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TACAAGCTGATGGATGTGAAGGCCTTCAGGTCATCCACACTGACTTaGGGGTGCACTTCGACAGCTGACTGGCCATCAAACATCATGGAG +
Preference number: 6 (lower is better)
Translates to: YKLMDVKAFRSSTLT*GCTSTADWPSNIME
Trigger: CTCCATGATGTTTGATGGCCAGTCAGCTGTCGAAGTGCACCCCAAAGTCAGTGTGGATGACCTGAAGGCCTTCACATCCATCAGCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CTTGGATCTTGCTTGCGACACTCCTGGTTTGAGCAATaGGCTCTCGGATCCTCTGGATGCTGGCAGAAATGT +
Preference number: 6 (lower is better)
Translates to: LGSCLRHSWFEQ*ALGSSGCWQKC
Trigger: ACATTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAAACCAGGAGTGTCGCAAGCAAGATCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TCGGCTTTTGTCTACTACCAGTTCATATCTTGTGTCTaGGATGGAGGTGACCACGAAGTGGGGCAGCCCATC +
Preference number: 6 (lower is better)
Translates to: SAFVYYQFISCV*DGGDHEVGQPI
Trigger: GATGGGCTGCCCCACTTCGTGGTCACCTCCATCTCAGACACAAGATATGAACTGGTAGTAGACAAAAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp CCGCTGCTTGAAAGTGATGGCTCTATTCATGTCTTCTaGATCCCTGACATGGTCGAGGGCCTGGTTAATGGA +
Preference number: 6 (lower is better)
Translates to: PLLESDGSIHVF*IPDMVEGLVNG
Trigger: TCCATTAACCAGGCCCTCGACCATGTCAGGGATGCAGAAGACATGAATAGAGCCATCACTTTCAAGCAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp CAGTGCAGACAGAATCCGGAGCCATCCAAGCACTCATaGGAATTGCCATTACAGTCACAGGGTGCACATTCT +
Preference number: 6 (lower is better)
Translates to: QCRQNPEPSKHS*ELPLQSQGAHS
Trigger: AGAATGTGCACCCTGTGACTGTAATGGCAATTCCCATGAGTGCTTGGATGGCTCCGGATTCTGTCTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GCCATTGACCATCAGGAGCACAAGGCCATTGTCAGCTaGTGTTCGGATTTCTATGTCAAAGCGAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: AIDHQEHKAIVS*CSDFYVKASHL
Trigger: CAGGTGACTCGCTTTGACATAGAAATCCGAACACCAGCTGACAATGGCCTTGTGCTCCTGATGGTCAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp AGACAGAATCCGGAGCCATCCAAGCACTCATGGGAATaGCCATTACAGTCACAGGGTGCACATTCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: RQNPEPSKHSWE*PLQSQGAHSPD
Trigger: GTCAGGAGAATGTGCACCCTGTGACTGTAATGGCAATTCCCATGAGTGCTTGGATGGCTCCGGATTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GCAGATGAGTCAAAGGTCTGCAGGTTCTGGGACCAGTaGCTGAGGTTGTTAGCCATTGGTGTGGTAACCTGT +
Preference number: 6 (lower is better)
Translates to: ADESKVCRFWDQ*LRLLAIGVVTC
Trigger: ACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp AGCCCATCGTGGTACTGCTTGTCTGTTGACATGACCTaGATGCCCTTTACGTCCATGACAACAGTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: SPSWYCLSVDMT*MPFTSMTTVPL
Trigger: CAACGGCACTGTTGTCATGGACGTAAAGGGCATCAAGGTCATGTCAACAGACAAGCAGTACCACGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TCAATTACAAAGTGGCGGATGCAGCCGGTGAAGGGTTaGCTGGGAGCCAAACGTGGTGTCAGTAAAGACTCT +
Preference number: 6 (lower is better)
Translates to: SITKWRMQPVKG*LGAKRGVSKDS
Trigger: AGAGTCTTTACTGACACCACGTTTGGCTCCCAGCAAACCCTTCACCGGCTGCATCCGCCACTTTGTAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GTGTTATATGCAGATGAGTCAAAGGTCTGCAGGTTCTGGGACCAGTaGCTGAGGTTGTTAGCCATTGGTGTGGTAACCTGTTGGACAGCC +
Preference number: 6 (lower is better)
Translates to: VLYADESKVCRFWDQ*LRLLAIGVVTCWTA
Trigger: GGCTGTCCAACAGGTTACCACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGCATATAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GGTCTTCAGACGAATGGCAAACTGGGATTTTTCACCAAAATCTCCTaGTTCGTGTTCAAACTCCTGGCGACTGTTGGCCGTGCCGCCATA +
Preference number: 6 (lower is better)
Translates to: GLQTNGKLGFFTKIS*FVFKLLATVGRAAI
Trigger: TATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGAACAAGGAGATTTTGGTGAAAAATCCCAGTTTGCCATTCGTCTGAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CTTTCCTTCTCAACCAGCATACCCTTTCTTGAGGCTTaGCTTCCCTTCTCATGGAGTCCCTCTACATCAGGC +
Preference number: 6 (lower is better)
Translates to: LSFSTSIPFLEA*LPFSWSPSTSG
Trigger: GCCTGATGTAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp TCCACTGCAGTGTTATATGCAGATGAGTCAAAGGTCTaGAGGTTCTGGGACCAGTTGCTGAGGTTGTTAGCC +
Preference number: 6 (lower is better)
Translates to: STAVLYADESKV*RFWDQLLRLLA
Trigger: GGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGCATATAACACTGCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp TCCACACTGACTTTGGGGTGCACTTCGACAGCTGACTaGCCATCAAACATCATGGAGACTTGGATCTTGCTT +
Preference number: 6 (lower is better)
Translates to: STLTLGCTSTAD*PSNIMETWILL
Trigger: AAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAGCTGTCGAAGTGCACCCCAAAGTCAGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AACACCTCCAACAAACACAGGCTCCCTGTGATCAACTaGCTTTGGATTCAACGGCCCAACTACATGGTTCAC +
Preference number: 6 (lower is better)
Translates to: NTSNKHRLPVIN*LWIQRPNYMVH
Trigger: GTGAACCATGTAGTTGGGCCGTTGAATCCAAAGCCAGTTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GTTGCTGAGGTTGTTAGCCATTGGTGTGGTAACCTGTaGGACAGCCGCTGTCGTCTTGTTAGCTTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: VAEVVSHWCGNL*DSRCRLVSFLN
Trigger: ATTGAGGAAGCTAACAAGACGACAGCGGCTGTCCAACAGGTTACCACACCAATGGCTAACAACCTCAGCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp ACCTTGATGCCCTTTACGTCCATGACAACAGTGCCGTaGTCCAGTGAAATGGAAAACACGTCCGACCCTGAT +
Preference number: 6 (lower is better)
Translates to: TLMPFTSMTTVP*SSEMENTSDPD
Trigger: ATCAGGGTCGGACGTGTTTTCCATTTCACTGGACAACGGCACTGTTGTCATGGACGTAAAGGGCATCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp CTCCAACAAACACAGGCTCCCTGTGATCAACTGGCTTaGGATTCAACGGCCCAACTACATGGTTCACTTCTG +
Preference number: 6 (lower is better)
Translates to: LQQTQAPCDQLA*DSTAQLHGSLL
Trigger: CAGAAGTGAACCATGTAGTTGGGCCGTTGAATCCAAAGCCAGTTGATCACAGGGAGCCTGTGTTTGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAACTGGCTTaGGATTCAACGGCCCAACTACATGGTTCACTTCTGAGTCTACAT +
Preference number: 6 (lower is better)
Translates to: LEHLQQTQAPCDQLA*DSTAQLHGSLLSLH
Trigger: ATGTAGACTCAGAAGTGAACCATGTAGTTGGGCCGTTGAATCCAAAGCCAGTTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp ATCCATGCTTTCCTTCTCAACCAGCATACCCTTTCTTaGGGCTTGACTTCCCTTCTCATGGAGTCCCTCTAC +
Preference number: 6 (lower is better)
Translates to: IHAFLLNQHTLS*GLTSLLMESLY
Trigger: GTAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp TTCCTCAAGAGTGAGCTGAGGTATGGTAAGAGAGTCTaGAGACATACTCAGAGAGGCACCCACAACTTCCAT +
Preference number: 6 (lower is better)
Translates to: FLKSELRYGKRV*RHTQRGTHNFH
Trigger: ATGGAAGTTGTGGGTGCCTCTCTGAGTATGTCTGCAGACTCTCTTACCATACCTCAGCTCACTCTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp GTGTTATATGCAGATGAGTCAAAGGTCTGCAGGTTCTaGGACCAGTTGCTGAGGTTGTTAGCCATTGGTGTG +
Preference number: 6 (lower is better)
Translates to: VLYADESKVCRF*DQLLRLLAIGV
Trigger: CACACCAATGGCTAACAACCTCAGCAACTGGTCCCAGAACCTGCAGACCTTTGACTCATCTGCATATAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AATCTCCTTGTTCGTGTTCAAACTCCTGGCGACTGTTaGCCGTGCCGCCATATTGATAGGCATGTTCTATTG +
Preference number: 6 (lower is better)
Translates to: NLLVRVQTPGDC*PCRHIDRHVLL
Trigger: CAATAGAACATGCCTATCAATATGGCGGCACGGCCAACAGTCGCCAGGAGTTTGAACACGAACAAGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GGTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATACCCTTTCTaGAGGCTTGACTTCCCTTCTCATGGAGTCCCTCTACATCAGGCA +
Preference number: 6 (lower is better)
Translates to: GQLYPCFPSQPAYPF*RLDFPSHGVPLHQA
Trigger: TGCCTGATGTAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TGCTCTGCCTTCCCTTTTGTTGGATTCTTCCCTCGAAGTCGGCTTTaGTCTACTACCAGTTCATATCTTGTGTCTGAGATGGAGGTGACC +
Preference number: 6 (lower is better)
Translates to: CSAFPFVGFFPRSRL*STTSSYLVSEMEVT
Trigger: GGTCACCTCCATCTCAGACACAAGATATGAACTGGTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp GATTTTGTCCCTCATGTTGTGGGCTTGCTCGACAAGATGGGTTGCTaGGTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATACCCTT +
Preference number: 6 (lower is better)
Translates to: DFVPHVVGLLDKMGC*VNCIHAFLLNQHTL
Trigger: AAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp CTTGGATTTTGTCCCTCATGTTGTGGGCTTGCTCGACAAGATGGGTaGCTTGGTCAATTGTATCCATGCTTTCCTTCTCAACCAGCATAC +
Preference number: 6 (lower is better)
Translates to: LGFCPSCCGLARQDG*LGQLYPCFPSQPAY
Trigger: GTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp AGACTTCTTGGGGCGCACCTCCGATGTAGATGTCCGTaGAAGGAATCTTTTTCTTCTCATTGTCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: RLLGAHLRCRCP*KESFSSHCLCS
Trigger: AGAGCACAGACAATGAGAAGAAAAAGATTCCTTTCACGGACATCTACATCGGAGGTGCGCCCCAAGAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CCATCTGCCATCACAGAGATTCTGCTTGGGAGTTACTaGGGTAGAAAAGTCTCTGACACCGTTGTTGACCTT +
Preference number: 6 (lower is better)
Translates to: PSAITEILLGSY*GRKVSDTVVDL
Trigger: AAGGTCAACAACGGTGTCAGAGACTTTTCTACCTCAGTAACTCCCAAGCAGAATCTCTGTGATGGCAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp GCTCGACAAGATGGGTTGCTTGGTCAATTGTATCCATaGTTTCCTTCTCAACCAGCATACCCTTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: ARQDGLLGQLYP*FPSQPAYPFLR
Trigger: CCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp CTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTTGTTaGATTCTTCCCTCGAAGTCGGCTTTTGTCTACTAC +
Preference number: 6 (lower is better)
Translates to: LSCLSLLCLPFC*ILPSKSAFVYY
Trigger: GTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TATCCATGCTTTCCTTCTCAACCAGCATACCCTTTCTaGAGGCTTGACTTCCCTTCTCATGGAGTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: YPCFPSQPAYPF*RLDFPSHGVPL
Trigger: TAGAGGGACTCCATGAGAAGGGAAGTCAAGCCTCAAGAAAGGGTATGCTGGTTGAGAAGGAAAGCATGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TGTCCCTCATGTTGTGGGCTTGCTCGACAAGATGGGTaGCTTGGTCAATTGTATCCATGCTTTCCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: CPSCCGLARQDG*LGQLYPCFPSQ
Trigger: TTGAGAAGGAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp ATCTTGCTGTTGATCTCTTGGATTTTGTCCCTCATGTaGTGGGCTTGCTCGACAAGATGGGTTGCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: ILLLISWILSLM*WACSTRWVAWS
Trigger: TGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGATCAACAGCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp AACATACTGCCATTGACCATCAGGAGCACAAGGCCATaGTCAGCTGGTGTTCGGATTTCTATGTCAAAGCGA +
Preference number: 6 (lower is better)
Translates to: NILPLTIRSTRP*SAGVRISMSKR
Trigger: TCGCTTTGACATAGAAATCCGAACACCAGCTGACAATGGCCTTGTGCTCCTGATGGTCAATGGCAGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GGAGTTACTGAGGTAGAAAAGTCTCTGACACCGTTGTaGACCTTCACTATGACCTGTCCGTTTCTCATGTGC +
Preference number: 6 (lower is better)
Translates to: GVTEVEKSLTPL*TFTMTCPFLMC
Trigger: GCACATGAGAAACGGACAGGTCATAGTGAAGGTCAACAACGGTGTCAGAGACTTTTCTACCTCAGTAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp CATCTTGCTGTTGATCTCTTGGATTTTGTCCCTCATGTTGTGGGCTaGCTCGACAAGATGGGTTGCTTGGTCAATTGTATCCATGCTTTC +
Preference number: 6 (lower is better)
Translates to: HLAVDLLDFVPHVVG*LDKMGCLVNCIHAF
Trigger: GAAAGCATGGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGATCAACAGCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TTTCTGTTCCAGAAACTTCAGGCCAATAGGATCCCATaGAGGCGCATCCTTACTCTTCTCTCCCTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: FLFQKLQANRIP*RRILTLLSLFV
Trigger: AACAAACAGGGAGAGAAGAGTAAGGATGCGCCTTCATGGGATCCTATTGGCCTGAAGTTTCTGGAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp TTGATCTCTTGGATTTTGTCCCTCATGTTGTGGGCTTaGTCGACAAGATGGGTTGCTTGGTCAATTGTATCC +
Preference number: 6 (lower is better)
Translates to: LISWILSLMLWA*STRWVAWSIVS
Trigger: GGATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp TCCTTCACTCTCTCATGTTGTTTCTCATGGTCCCGCTaGTTGAAAGTGATGGCTCTATTCATGTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SFTLSCCFSWSR*LKVMALFMSSA
Trigger: TGCAGAAGACATGAATAGAGCCATCACTTTCAAGCAGCGGGACCATGAGAAACAACATGAGAGAGTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp TCCATCTGTTCCTTCACTCTCTCATGTTGTTTCTCATaGTCCCGCTGCTTGAAAGTGATGGCTCTATTCATG +
Preference number: 6 (lower is better)
Translates to: SICSFTLSCCFS*SRCLKVMALFM
Trigger: CATGAATAGAGCCATCACTTTCAAGCAGCGGGACCATGAGAAACAACATGAGAGAGTGAAGGAACAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp GTTGATCTCTTGGATTTTGTCCCTCATGTTGTGGGCTaGCTCGACAAGATGGGTTGCTTGGTCAATTGTATC +
Preference number: 6 (lower is better)
Translates to: VDLLDFVPHVVG*LDKMGCLVNCI
Trigger: GATACAATTGACCAAGCAACCCATCTTGTCGAGCAAGCCCACAACATGAGGGACAAAATCCAAGAGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TTCACTCTCTCATGTTGTTTCTCATGGTCCCGCTGCTaGAAAGTGATGGCTCTATTCATGTCTTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: FTLSCCFSWSRC*KVMALFMSSAS
Trigger: GGATGCAGAAGACATGAATAGAGCCATCACTTTCAAGCAGCGGGACCATGAGAAACAACATGAGAGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TCTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTTGTaGGATTCTTCCCTCGAAGTCGGCTTTTGTCTACTA +
Preference number: 6 (lower is better)
Translates to: SQLFESALPSLL*DSSLEVGFCLL
Trigger: TAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TCTTCTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTaGTTGGATTCTTCCCTCGAAGTCGGCTTTTGTCTA +
Preference number: 6 (lower is better)
Translates to: SSQLFESALPSL*LDSSLEVGFCL
Trigger: TAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp TGCTTCATCATTGCTAGAATCTGCCTTGGCCTGCAGCTCTCTGGCTaGATTGAGAAGGTTGTCACTTTCATCCTTATGGTAAATGATCTG +
Preference number: 6 (lower is better)
Translates to: CFIIARICLGLQLSG*IEKVVTFILMVNDL
Trigger: CAGATCATTTACCATAAGGATGAAAGTGACAACCTTCTCAATCAAGCCAGAGAGCTGCAGGCCAAGGCAGATTCTAGCAATGATGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp AGAACTTCTTCTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTTGTaGGATTCTTCCCTCGAAGTCGGCTTTTGTCTACTACCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: RTSSQLFESALPSLL*DSSLEVGFCLLPVH
Trigger: ATGAACTGGTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAGAAGAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp AGTAGAACTTCTTCTCAGTTGTTTGAGTCTGCTCTGCCTTCCCTTTaGTTGGATTCTTCCCTCGAAGTCGGCTTTTGTCTACTACCAGTT +
Preference number: 6 (lower is better)
Translates to: SRTSSQLFESALPSL*LDSSLEVGFCLLPV
Trigger: AACTGGTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAAGGCAGAGCAGACTCAAACAACTGAGAAGAAGTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS GCA 72 bp ACTGTAATTCTGTGCCATCTGCCATCACAGAGATTCTaGTTGGGAGTTACTGAGGTAGAAAAGTCTCTGACA +
Preference number: 6 (lower is better)
Translates to: TVILCHLPSQRF*LGVTEVEKSLT
Trigger: TGTCAGAGACTTTTCTACCTCAGTAACTCCCAAGCAGAATCTCTGTGATGGCAGATGGCACAGAATTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp AGTCCCTCTACATCAGGCAGGAGGCTTCTCAGTGTGTTCTCCGAGTaGTTTATCTGTATCTTTCTTAGGGTATACTGGTTTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: SPSTSGRRLLSVFSE*FICIFLRVYWFSLS
Trigger: AGAAAGAGAAAACCAGTATACCCTAAGAAAGATACAGATAAACAACTCGGAGAACACACTGAGAAGCCTCCTGCCTGATGTAGAGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp ACATCCAGTGAAATTAGCATACTGAGGACTGATGGGTaGGCCACCAAAGTAGAACTTCTTCTCAGTTGTTTG +
Preference number: 6 (lower is better)
Translates to: TSSEISILRTDG*ATKVELLLSCL
Trigger: CAAACAACTGAGAAGAAGTTCTACTTTGGTGGCTCACCCATCAGTCCTCAGTATGCTAATTTCACTGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CCA 72 bp AAATCATCCCATGTGAGGAACGGGTCTTCAGACGAATaGCAAACTGGGATTTTTCACCAAAATCTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: KSSHVRNGSSDE*QTGIFHQNLLV
Trigger: AACAAGGAGATTTTGGTGAAAAATCCCAGTTTGCCATTCGTCTGAAGACCCGTTCCTCACATGGGATGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 72 bp TTCCCTTTTGTTGGATTCTTCCCTCGAAGTCGGCTTTaGTCTACTACCAGTTCATATCTTGTGTCTGAGATG +
Preference number: 6 (lower is better)
Translates to: FPFVGFFPRSRL*STTSSYLVSEM
Trigger: CATCTCAGACACAAGATATGAACTGGTAGTAGACAAAAGCCGACTTCGAGGGAAGAATCCAACAAAAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TGTCAATCCCACTCACAGCATCATAAATTCGATCAGTaGTATTCAGAGCAAGTTCTGCTGTTTCGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: CQSHSQHHKFDQ*YSEQVLLFRWL
Trigger: AAGCCAACGAAACAGCAGAACTTGCTCTGAATATCACTGATCGAATTTATGATGCTGTGAGTGGGATTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS CAA 90 bp CTGCTCTTTTCCCGAATAAATATCACATCATGCCACAATCCATCATaGTATTTCTCCTGGCTTCTAATCTTCAGTTTCTTATGGCCAACA +
Preference number: 6 (lower is better)
Translates to: LLFSRINITSCHNPS*YFSWLLIFSFLWPT
Trigger: TGTTGGCCATAAGAAACTGAAGATTAGAAGCCAGGAGAAATACAATGATGGATTGTGGCATGATGTGATATTTATTCGGGAAAAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp TATTCAGAGCAAGTTCTGCTGTTTCGTTGGCTTCACTaGCATAATTGGCGATATTTTCATAGACGTTTGATG +
Preference number: 6 (lower is better)
Translates to: YSEQVLLFRWLH*HNWRYFHRRLM
Trigger: CATCAAACGTCTATGAAAATATCGCCAATTATGTCAGTGAAGCCAACGAAACAGCAGAACTTGCTCTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6
CDS TCA 72 bp CCAACTACATGGTTCACTTCTGAGTCTACATCCAACTaGACCACGTTTGAATCTCTAATAACTGTAATTCTG +
Preference number: 6 (lower is better)
Translates to: PTTWFTSESTSN*TTFESLITVIL
Trigger: CAGAATTACAGTTATTAGAGATTCAAACGTGGTTCAGTTGGATGTAGACTCAGAAGTGAACCATGTAGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019992.6