RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032796

Ensembl transcript IDs: ENSMUST00000035471.9

Found 555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCAATGGGATGGGAATaGGAGCTGAGCTGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLAMGWE*ELSCLS
Trigger: ACTCAAGCAGCTCAGCTCCCATTCCCATCCCATTGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAACTGCTCTCTTCCATaGGTTGGCGATGATTCCAAG +
Preference number: 2 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLNCSLP*VGDDSK
Trigger: CTTGGAATCATCGCCAACGCATGGAAGAGAGCAGTT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTTGAGTTCACAAACTaGTCTCTTCCATGCGTTGGC +
Preference number: 2 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLEFTN*SLPCVG
Trigger: GCCAACGCATGGAAGAGAGCAGTTTGTGAACTCAAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAAACATAACCTGAGATaGCAATGGGATGGGAATGGG +
Preference number: 2 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLKHNLR*QWDGNG
Trigger: CCCATTCCCATCCCATTGCCATCTCAGGTTATGTTT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR GCA 72 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTaGTCTCTTCCATGCGTTGGCGATGATTCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: MGMGAELLEFTN*SLPCVGDDSKG
Trigger: GCCCTTGGAATCATCGCCAACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR GCA 72 bp CCTGAGATGGCAATGGGATGGGAATGGGAGCTGAGCTaGTTGAGTTCACAAACTGCTCTCTTCCATGCGTTG +
Preference number: 3 (lower is better)
Translates to: PEMAMGWEWELS*LSSQTALFHAL
Trigger: CAACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCATCCCATTGCCATCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR CCA 72 bp GTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTaGAAACATAACCTGAGATGGCAATGGGATGGGAAT +
Preference number: 3 (lower is better)
Translates to: VALVQHKYSIFL*KHNLRWQWDGN
Trigger: ATTCCCATCCCATTGCCATCTCAGGTTATGTTTCCAGAGGAAAATGCTGTATTTATGTTGAACTAAAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTGAGCAGGGCAGGGTaGGAGACCTTGGTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLSRAG*ETLVRP
Trigger: GGGCCGGACCAAGGTCTCCCACCCTGCCCTGCTCAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAAGGGCACATGTGCCTaGGCCCCACCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVKGTCA*APPASS
Trigger: GGAGGAGGCTGGTGGGGCTCAGGCACATGTGCCCTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCACTGTAGGAGCCGGTaGGGGCATGCAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVHCRSR*GHAGGP
Trigger: AGGCCCTCCTGCATGCCCCCACCGGCTCCTACAGTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGGTACCACCGTCCTCTaGGCAGCTGCAGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVGTTVL*AAAETL
Trigger: CAGGGTCTCTGCAGCTGCTCAGAGGACGGTGGTACC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCAGGAGCACAGTCCTaGCAGGAGTGTCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPGAQS*QECPAV
Trigger: CACCGCAGGACACTCCTGTCAGGACTGTGCTCCTGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCCACTTGCCATCACTaGGCAGGGCAGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVATCHH*AGQGGR
Trigger: TCTCCCACCCTGCCCTGCTCAGTGATGGCAAGTGGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCTCCTCCGCATCCTTaGCCAGGGCAACCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPPPHP*PGQPGG
Trigger: TCCTCCTGGTTGCCCTGGGCAAGGATGCGGAGGAGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGTTGCCGGAGGAAATaGTTCCGGGCCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRCRRK*FRASRA
Trigger: AGCCCTGGAGGCCCGGAACCATTTCCTCCGGCAACG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGGTCCCCGGATGTGTaGTCCCTGCAGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVWSPDV*SLQLRH
Trigger: GTGCCTGAGCTGCAGGGACCACACATCCGGGGACCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCACCGCACTCTCGTTaGCTGCTGCCGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSPHSR*LLPPAL
Trigger: GAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTCTGGTGCATGCTCTaGAGGGCAGACACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVFWCML*RADTGG
Trigger: GCCACCCGTGTCTGCCCTTCAGAGCATGCACCAGAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCAGCCGGGGATTTCTTaGTCTGACCTCCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVQPGIS*SDLRAL
Trigger: GAGGGCTCGGAGGTCAGATCAAGAAATCCCCGGCTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGCAGAAGCAGGGGCTaGAGCCTTGAGGGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSRSRG*SLEGCP
Trigger: GGGACAACCCTCAAGGCTGCAGCCCCTGCTTCTGCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGGCTTGCAGACACACTaGCCGGATGCACGGTCACAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVGLQTH*PDARSQ
Trigger: CTGTGACCGTGCATCCGGGCAGTGTGTCTGCAAGCC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGCAGCTCAGAGGCATaGTGCTCTGCCCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVCSSEA*CSALWT
Trigger: GGTCCACAGGGCAGAGCAGCATGCCTCTGAGCTGCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGGAGCCGTGTCTACTaGGCACAGTTCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRSRVY*AQFRLW
Trigger: CCACAGCCTGAACTGTGCGCAGTAGACACGGCTCCG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGGCACTTACTGCACTaGGGGCCCACGGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVWHLLH*GPTAFS
Trigger: GGAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGCTGCTCTGCCCTGTaGACCAGGTCACGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVCCSAL*TRSRAL
Trigger: AAGAGCCCGTGACCTGGTCCACAGGGCAGAGCAGCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTGCCGCCAGCTCTCTaGCTTTCCTGCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLPPAL*LSCPSL
Trigger: GAGAGAAGGGCAGGAAAGCCAGAGAGCTGGCGGCAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR CAA 72 bp AGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTaGGCGATGATTCCAAGGGCAGAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: SCLSSQTALFHA*AMIPRAEAGDS
Trigger: ACTGTCGCCAGCCTCTGCCCTTGGAATCATCGCCAACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
3UTR CAA 72 bp GAGATGGCAATGGGATGGGAATGGGAGCTGAGCTGCTaGAGTTCACAAACTGCTCTCTTCCATGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: EMAMGWEWELSC*SSQTALFHALA
Trigger: CGCCAACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCATCCCATTGCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGGCTGCCGACAGTCCTaGAGTCACAGGGGATGCAAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVGCRQS*SHRGCN
Trigger: ATTGCATCCCCTGTGACTGCAGGACTGTCGGCAGCC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGAGTGTCCTGCGGTaGCAGGAGGACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRSVLR*QEDRHR
Trigger: TCTGTGTCTGTCCTCCTGGCACCGCAGGACACTCCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGGATGTGTGGTCCCTaGAGCTCAGGCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRMCGP*SSGTFQ
Trigger: CTGGAAAGTGCCTGAGCTGCAGGGACCACACATCCG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCAGCTACCACCTGCTaGTCGAGGGTTGCCGTGATA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVAATTC*SRVAVI
Trigger: TATCACGGCAACCCTCGAGCAGCAGGTGGTAGCTGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGACACACTGCCCGGATaGACGGTCACAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVDTLPG*TVTVTV
Trigger: CACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCAAAGCTCCTGCCCTaGTCTGCAGCTCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPKLLP*SAAQRH
Trigger: ATGCCTCTGAGCTGCAGAGCAGGGCAGGAGCTTTGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTCAGGTCCAAGGACTaGACTTGTGAGCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLRSKD*TCEPLL
Trigger: GAGCAGGGGCTCACAAGTGCAGTCCTTGGACCTGAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCACCACAGTCACACTaGGGGACTCTTGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPPQSH*GTLGRQ
Trigger: TTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTTTCAGGTTGGCCTTaGCAAGGAGCAGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLSGWP*QGAAGG
Trigger: ACCTCCTGCTGCTCCTTGTCAAGGCCAACCTGAAAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCACACAGCCCCGGAATaGGGCCCGGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHTAPE*GPAAQA
Trigger: TGCCTGAGCAGCCGGGCCTCATTCCGGGGCTGTGTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGTGCTCCACGAGTTTaGAGAACATCTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRAPRV*RTSQAP
Trigger: AGGGGCCTGAGATGTTCTGCAAACTCGTGGAGCACG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCAGGAGGCTGGAAATaGACGCCTTCGATTGTGCCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSGGWK*TPSIVP
Trigger: GGGCACAATCGAAGGCGTGCATTTCCAGCCTCCTGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCAGAGCCTTGGGGGTTaGAATCACACGTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVQSLGG*NHTFGS
Trigger: GCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCTGATAGGCGCGGATaGAGTCTCTGTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVADRRG*SLCLQT
Trigger: TGTCTGCAGACAGAGACTGCATCCGCGCCTATCAGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCAGAACTGCTGCTGCTaGCGAGGTAGAAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVQNCCC*RGRRGG
Trigger: ACCTCCTCTTCTACCTCGGCAGCAGCAGCAGTTCTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTCTGTGCAGACTCTaGATGGGCTCTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSLCRL*MGSSAS
Trigger: GCTGGCAGAAGAGCCCATGCAGAGTCTGCACAGAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGCAAATGTCCGAATaGTCAGCTGCACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRQMSE*SAAPGA
Trigger: GGCTCCAGGTGCAGCTGAGCATTCGGACATTTGCCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCACATCCAGCGTGGTTaGATTGCCCACCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVHIQRG*IAHHSH
Trigger: GTGACTGTGGTGGGCAATGCAACCACGCTGGATGTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTCAGGACGATGCGGTaGTTGCTTTTGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVRTMR*LLLWAW
Trigger: CCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTGACAGAGTCACAGTaGCCAGCCTCCAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVTESQ*PASKGS
Trigger: TGATCCCTTGGAGGCTGGCCACTGTGACTCTGTCAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAAGAGCTGGTCTCCCTaGAACTGCTTTGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVKSWSP*NCFGSR
Trigger: GCGGCTACCAAAGCAGTTCCAGGGAGACCAGCTCTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGCATTTCTCACAGTaGAGCCCTGTAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRHFSQ*SPVAPG
Trigger: GCCAGGAGCTACAGGGCTCCACTGTGAGAAATGCCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTCGGAAGCGGCTCCTaGAGTCTCTCCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVGSGS*SLSLLC
Trigger: ACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTTGGTGGCGAATGTaGCCAGCAGGGATGACTCAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSWWRM*PAGMTQ
Trigger: CTGAGTCATCCCTGCTGGCCACATTCGCCACCAAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGGTGCTTGCTTTTGTaGGCTTGGAGTGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRCLLL*AWSVCH
Trigger: GTGGCACACACTCCAAGCCCACAAAAGCAAGCACCG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTACTCTCTCCCATTCTaGATACTGGGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVYSLPF*ILGLCH
Trigger: GTGGCAGAGCCCCAGTATTCAGAATGGGAGAGAGTA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGCCCCTGCTCAGCCTaGGGTTCCTCACACAGCCCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSPCSA*GSSHSP
Trigger: GGGGCTGTGTGAGGAACCTCAGGCTGAGCAGGGGCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGCCGGCCCGGCACGTaGTCCACGAGTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGRPGT*STSLQN
Trigger: GTTCTGCAAACTCGTGGAGCACGTGCCGGGCCGGCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCAATTCTGCTCTGCTaGAGTCCCTGGCCGTATGAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVAILLC*SPWPYD
Trigger: ATCATACGGCCAGGGACTGCAGCAGAGCAGAATTGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGAGGGCGGGGTCCCCTaGCACCACTTTCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLEGGVP*HHFLGA
Trigger: AGCTCCCAGAAAGTGGTGGCAGGGGACCCCGCCCTC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCTCTCTGGCTTTCCTaGCCTTCTCTCTCATACCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVALWLS*PSLSYL
Trigger: GAGGTATGAGAGAGAAGGGCAGGAAAGCCAGAGAGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGAGCCGGTGGGGGCATaGAGGAGGGCCTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLEPVGA*RRAFLR
Trigger: TCTGAGGAAGGCCCTCCTGCATGCCCCCACCGGCTC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGATCAAACATGAAGTaGAGGCGGCCCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRSNMK*RRPSWS
Trigger: GCTCCAAGAGGGCCGCCTGCACTTCATGTTTGATCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTGCCACCAGTTGTTaGTGCCATCGATTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSATSC*CHRLRV
Trigger: CACACGCAATCGATGGCACCAACAACTGGTGGCAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTCTGAGGTCCCGATaGCTAAGGGTCATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSLRSR*LRVMRS
Trigger: AGACCTCATGACCCTTAGCCATCGGGACCTCAGAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGGCAGGCACAAGGCTaGCAGTCTCCTGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGQAQG*QSPGVP
Trigger: TGGGACCCCAGGAGACTGCCAGCCTTGTGCCTGCCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTTCCACATCCAGCGTaGTTGCATTGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVFPHPA*LHCPPQ
Trigger: CTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCATGGCGGTCATCCTTaGTACAGACAGAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVHGGHP*YRQNSE
Trigger: CTCTGAGTTCTGTCTGTATCAAGGATGACCGCCATG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGGTCCTCTGATGTATTaGAGACCCTCAGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVGPLMY*RPSGSK
Trigger: CTTTGAGCCTGAGGGTCTTCAATACATCAGAGGACC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATGCAGCCCTTAAAATaGGTAACCTTCACAGCCGGG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVMQPLK*VTFTAG
Trigger: CCCGGCTGTGAAGGTTACTCATTTTAAGGGCTGCAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCGGGGAGAAGGTGCTaGAGAGAATTACTATCTGCG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSGRRC*RELLSA
Trigger: CGCAGATAGTAATTCTCTTCAGCACCTTCTCCCCGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTCCCTCAAGCAGCATaGTGGAAAAGAAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVPQAA*WKRRAH
Trigger: ATGTGCCCTTCTTTTCCATCATGCTGCTTGAGGGAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGCCCGGGGCAGGAATaGGGGAAGACTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGPGQE*GKTPCR
Trigger: CCTACAAGGAGTCTTCCCTCATTCCTGCCCCGGGCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAAGGGTCATGAGGTCTaGGTTGAGTGTTCTGATGCG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVKGHEV*VECSDA
Trigger: CGCATCAGAACACTCAACGCAGACCTCATGACCCTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCATGGCCGTAGCAAATaGACATGCCTCCAACGGAAA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVHGRSK*TCLQRK
Trigger: TTTCCGTTGGAGGCATGTGCATTTGCTACGGCCATG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAAATGTTGGCAATTCTaGTCTGCTGCAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVKCWQF*SAAVPG
Trigger: GCCAGGGACTGCAGCAGAGCAGAATTGCCAACATTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGCTCCTCAGCAGCCTaGAGTTTTTCACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSSSAA*SFSLWL
Trigger: CAACCACAGTGAAAAACTGCAGGCTGCTGAGGAGCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCTCCTGCCCTGCTCTaGAGCTCAGAGGCATGCTGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLAPALL*SSEACC
Trigger: GCAGCATGCCTCTGAGCTGCAGAGCAGGGCAGGAGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGAAAGTCAGAACTGCTaGTGCTGCCGAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVESQNC*CCRGRR
Trigger: TCTTCTACCTCGGCAGCAGCAGCAGTTCTGACTTTC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCTGGAGTCTCTCCTTaGTTTGTCTCCTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPGVSP*FVSLSL
Trigger: CAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCCCACGGGCAGCTGCTaGCATGGCCGTAGCAAATGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLPTGSC*HGRSKC
Trigger: GCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTCCATCAGTGAGGTaGCAGGTAGGGCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSPSVR*QVGLKL
Trigger: CAATTTCAGCCCTACCTGCCACCTCACTGATGGAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTTTTGCAGGGGCAGTaGCCAGAGAGAACATCACAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVFLQGQ*PERTSH
Trigger: GTGTGATGTTCTCTCTGGCCACTGCCCCTGCAAAAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGGAAAGGAGGCTGTTaGCCTCCTTCAATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVWKGGC*PPSMPS
Trigger: TGAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACGAGGTCATCTACGTaGCTCCTGATTTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTRSST*LLIFLA
Trigger: GGCCAGAAAAATCAGGAGCCACGTAGATGACCTCGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCCTCTGTCAGTGTCTaGATGTTGCTGTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSSVSV*MLLWTC
Trigger: ACACGTCCACAGCAACATCCAGACACTGACAGAGGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGAGGAATCTTCGTTCTaGGAGCTTCCAAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVEESSF*ELPKQP
Trigger: TGGCTGCTTTGGAAGCTCCCAGAACGAAGATTCCTC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTACAGGTTTCACAGTTaGTCCCTGTGGTATTCTGCG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVYRFHS*SLWYSA
Trigger: CGCAGAATACCACAGGGATCAACTGTGAAACCTGTA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTCACACCAGGATCCTaGGTAACCCGGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLTPGS*VTRGTL
Trigger: CAGTGTGCCCCGGGTTACTCAGGATCCTGGTGTGAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCTTCCTCCTGGTACTaGCACTTTCCTTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVASSWY*HFPLET
Trigger: GGTTTCTAAAGGAAAGTGTCAGTACCAGGAGGAAGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATCCCTGTGGTATTCTaGGAGCAGTTGACACAAACC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVIPVVF*EQLTQT
Trigger: GGTTTGTGTCAACTGCTCGCAGAATACCACAGGGAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCAAGGGATCAACATTaGCACTGCAGTTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPRDQH*HCSCMV
Trigger: TACCATGCAACTGCAGTGGCAATGTTGATCCCTTGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTTGGCCTCCTTCAATaGCTTCAACTTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVGLLQ*LQLFLR
Trigger: CCTCAGGAAAAGTTGAAGGCATTGAAGGAGGCCAAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGCTCAGAGGCATGCTaGTCTGCCCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSSEAC*SALWTR
Trigger: CCTGGTCCACAGGGCAGAGCAGCATGCCTCTGAGCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTCATCGTGGAGTTATaGAGAAGGTCGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVIVEL*RRSFVS
Trigger: GGAGACAAACGACCTTCTGCATAACTCCACGATGAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACAGGCCAATCGATTTaGCATTCAAGAAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTGQSI*HSRRPL
Trigger: GAGAGGCCTTCTTGAATGGCAAATCGATTGGCCTGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCTCCATGGAAATGTTaGCAATTCTGCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPPWKC*QFCSAA
Trigger: TGCAGCAGAGCAGAATTGCCAACATTTCCATGGAGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCTGCCACCACTTTCTaGGAGCTTTTCTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPATTF*ELFSVV
Trigger: TACTACAGAGAAAAGCTCCCAGAAAGTGGTGGCAGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTGTGGCATTCACTCTaGACAGGTCCTCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLWHSL*TGPLMY
Trigger: ATACATCAGAGGACCTGTCCAGAGTGAATGCCACAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTCCAGCCAACAGAGTaGTCATCGTGGAGTTATGCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVFQPTE*SSWSYA
Trigger: TGCATAACTCCACGATGACCACTCTGTTGGCTGGAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGAATTCCAACCTTGTaGACCCGGAGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGIPTL*TRSPGP
Trigger: GGGACCTGGGCTCCGGGTCCACAAGGTTGGAATTCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGCTGCTGTTCTTGGTaGCGAATGTGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRCCSW*RMWPAG
Trigger: CCCTGCTGGCCACATTCGCCACCAAGAACAGCAGCG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACAGAGCAAATTCCATaGATGTCACACTCGGATGCA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTEQIP*MSHSDA
Trigger: TGCATCCGAGTGTGACATTCATGGAATTTGCTCTGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACACCTGGTCCACAGTaGCACTGTCCTTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTPGPQ*HCPSSV
Trigger: CACGGAGGAAGGACAGTGTCACTGTGGACCAGGTGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTTGGCAATGAGCTCTaGGGTCACATTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLGNEL*GHILFF
Trigger: GAAGAACAAAATGTGACCTCAGAGCTCATTGCCAAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCCACTTTGGCACTGCTaGTTCCCAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLPLWHC*FPGGRH
Trigger: ATGGCGTCCTCCTGGGAATCAGCAGTGCCAAAGTGG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCTTCTCCTCTCCTTTaGAACACTGCTGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVASPLL*NTAVIV
Trigger: TACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCCTCCTCCACTGTACTaGCCGGCAGTGTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLPPPLY*PAVFRL
Trigger: AAGCCTGAACACTGCCGGGCAGTACAGTGGAGGAGG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGTAGAATCCTGGCTTaGAGCGATCACAGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVCRILA*SDHSSY
Trigger: GTAAGAACTGTGATCGCTGCAAGCCAGGATTCTACA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCCATAGTAACCATCTaGACATCTCTCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSIVTI*TSLTPG
Trigger: TCCTGGTGTGAGAGATGTGCAGATGGTTACTATGGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGGAGCCCACAGCACTaGAATTGCAAGCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLWSPQH*NCKPGT
Trigger: GGTGCCAGGCTTGCAATTGCAGTGCTGTGGGCTCCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGTCCTCTGAGCAGCTaGAGAGACCCTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRPLSS*RDPVPG
Trigger: ACCTGGAACAGGGTCTCTGCAGCTGCTCAGAGGACG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGTGATGAGGACAGGTaGACGGGGTACAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGDEDR*TGYSLQ
Trigger: CTGGAGACTGTACCCCGTGCACCTGTCCTCATCACC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGTCTGGTTCAACGTTaGCACCTTTTCTGTGATTTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRLVQR*HLFCDF
Trigger: GAAATCACAGAAAAGGTGGCAACGTTGAACCAGACG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGAGCAGCAGGAGGTTaGTCTCCTGGGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGAAGG*SPGSCF
Trigger: GAAGCAAGACCCAGGAGAGCAACCTCCTGCTGCTCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGGAGTCGTTGGCCTaGTTCATAATGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRESLA*FIMLSM
Trigger: CATGGATAACATTATGAAGCAGGCCAACGACTCCCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTGAATTCCAGCAACTaGGGTGAGGGGTCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVNSSN*GEGSSA
Trigger: CGCTGACGACCCCTCACCCCAGTTGCTGGAATTCAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATAACCTTTCCTACATaGACACTGACCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVITFPT*TLTWPL
Trigger: AAGTGGCCAGGTCAGTGTCCATGTAGGAAAGGTTAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGGTCACAGTCACTGTaGACAGAGCCTTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRSQSL*TEPWGL
Trigger: CAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCAGACACGGGTGGCTaGAAATCTTTACGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLADTGG*KSLRAV
Trigger: GACGGCGCGTAAAGATTTCCAGCCACCCGTGTCTGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCATGTTTCCAAACCTaGTTATGTAGATGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPCFQT*LCRCCA
Trigger: GGCACAGCATCTACATAACCAGGTTTGGAAACATGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATTGGTGGCCAGGTTaGGAATGGCAGGGAACAAGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHWWPG*EWQGTS
Trigger: GCTTGTTCCCTGCCATTCTCAACCTGGCCACCAATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGTACCGTGCTGAGGTaGATTCCAGCAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCTVLR*IPATGV
Trigger: CACCCCAGTTGCTGGAATTCACCTCAGCACGGTACA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTGTTGATGCTGATCTaGCGGTGCCCACCCAGGACA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLLMLI*RCPPRT
Trigger: TGTCCTGGGTGGGCACCGTCAGATCAGCATCAACAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGGCACTCGCAGGGCTaGCAGATTCCTCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLWHSQG*QIPPKS
Trigger: ACTCTTTGGAGGAATCTGTCAGCCCTGCGAGTGCCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATAGCTTCTGCTGCTaGCCCCTTTCCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHSFCC*PLSSQP
Trigger: AGGCTGTGAGGAAAGGGGTCAGCAGCAGAAGCTATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATATCTCTAGGTTCTTaGTACAGCCCACATAGCTTC +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVISLGS*YSPHSF
Trigger: GAAGCTATGTGGGCTGTATCAAGAACCTAGAGATAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCCGAGATCAAACATaGAGTGCAGGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCRDQT*SAGGPL
Trigger: AAGAGGGCCGCCTGCACTTCATGTTTGATCTCGGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTATAGCATTAGGGCTTaGTATGTCCAGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVYSIRA*YVQRDR
Trigger: TCTGTCTCTCTGGACATAGCAAGCCCTAATGCTATA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCAGAGCCTTCCACACTaGAGTTACAGGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLQSLPH*SYRAHS
Trigger: GCTGTGTGCCCTGTAACTGCAGTGTGGAAGGCTCTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATTTTCTGTTTGCTCTaGAATCCCTTCGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVIFCLL*NPFELD
Trigger: ATCCAGCTCGAAGGGATTGCAGAGCAAACAGAAAAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTGGTGAGCTCCTTTTaGAGATTTTCTGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLVSSF*RFSVCS
Trigger: AGAGCAAACAGAAAATCTGCAAAAGGAGCTCACCAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGGTAGCATTCTGCTaGATCTCTGTGAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRVAFC*ISVKFL
Trigger: AAGGAATTTCACAGAGATGCAGCAGAATGCTACCCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTGTCCAAAGCTCCTaGCCTGCTCTGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSVQSS*PALQLR
Trigger: TCTGAGCTGCAGAGCAGGGCAGGAGCTTTGGACAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCCCCGTGTTCTCTGTaGAGACTCTGCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSPCSL*RLCMGS
Trigger: AGAGCCCATGCAGAGTCTGCACAGAGAACACGGGGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGAGTGTGTGCCACTTaGCATCACAGAGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGVCAT*HHRELW
Trigger: CCAGAGCTCTCTGTGATGGCAAGTGGCACACACTCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGGAGGTTGCTCTCCTaGGTCTTGCTTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRRLLS*VLLPAS
Trigger: GGAAGCTGGAAGCAAGACCCAGGAGAGCAACCTCCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCACGGACCAGCTCGATaGATAGGAAGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHGPAR*IGSPWC
Trigger: GCACCAAGGACTTCCTATCCATCGAGCTGGTCCGTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCATGCTCAGCTGCACCTaGAGCCTCTTCCGGACATCA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLMLSCT*SLFRTS
Trigger: TGATGTCCGGAAGAGGCTCCAGGTGCAGCTGAGCAT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCAGGCAGGGATGCTGTaGGTGATAGTCCCGATGTTC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLQAGML*VIVPMF
Trigger: GAACATCGGGACTATCACCCACAGCATCCCTGCCTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCGAATGTACCGTGCTaGGGTGAATTCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLANVPC*GEFQQL
Trigger: CAGTTGCTGGAATTCACCTCAGCACGGTACATTCGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTATTCTGCGAGCAGTTaGCACAAACCCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLYSASS*HKPLLH
Trigger: GTGGAGGAGGGGTTTGTGTCAACTGCTCGCAGAATA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCTGTCCTGTCACGTaGGGTTTGCAGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCCPVT*GLQSHS
Trigger: ACTGTGTGACTGCAAACCTCACGTGACAGGACAGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAACGTGGCCAGGGCTTaGGTCCCATTGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLNVARA*VPLEVL
Trigger: AAGAACTTCCAATGGGACTCAAGCCCTGGCCACGTT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTCCGGACATCAGACTaGTTCAGAGGGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLFRTSD*FRGSTK
Trigger: CTTGGTGCTCCCTCTGAATCAGTCTGATGTCCGGAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCAGTCACAGGGGATaGAATTTGGGAAACCCCGGT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCSHRG*NLGNPG
Trigger: ACCGGGGTTTCCCAAATTGCATCCCCTGTGACTGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATTGCCACTGCAGTTaGATGGTACACAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHCHCS*MVHRFP
Trigger: GGGGAACCTGTGTACCATGCAACTGCAGTGGCAATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTCCAGACCCCAGTATaGCTCTTCACACTCCTCACA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVQTPV*LFTLLT
Trigger: TGTGAGGAGTGTGAAGAGGCATACTGGGGTCTGGAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAACTCTGAGCAGAGCTaGGACAGACCGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLNSEQS*DRPKQK
Trigger: CTTCTGCTTCGGTCTGTCGCAGCTCTGCTCAGAGTT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGAGAAAGTCAGAACTaGTGCTGCTGCCGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRESQN*CCCRGR
Trigger: TCTACCTCGGCAGCAGCAGCAGTTCTGACTTTCTCG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAAGAGAATTACTATCTaGGTCACGGTGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLKRITI*VTVGRS
Trigger: GCTCCGGCCCACCGTGACGCAGATAGTAATTCTCTT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCCCCCTGGCACGGTTaGGTTTCCATAGTAACCATC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSPWHG*VSIVTI
Trigger: GATGGTTACTATGGAAACCCAACCGTGCCAGGGGGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCACACCTCTCACAATaGGCACCGTCTGTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLAHLSQ*APSVFH
Trigger: ATGGAACACAGACGGTGCCCATTGTGAGAGGTGTGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTCTGCTGCAGTCCCTaGCCGTATGATGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLCCSP*PYDALM
Trigger: CATCAAAGCATCATACGGCCAGGGACTGCAGCAGAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTGTGGACAGAGCCTTaGGGGTTGCAATCACACGTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLWTEP*GLQSHV
Trigger: AACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACACTGGGGGACTCTTaGCCGTCAACAGTCATGAAC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTLGDS*PSTVMN
Trigger: GTTCATGACTGTTGACGGCCAAGAGTCCCCCAGTGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGACATATTGGTCACCTaGCTAATGGACCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLDILVT*LMDHVR
Trigger: CCTCACGTGGTCCATTAGTCAGGTGACCAATATGTC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATCTACGTGGCTCCTaGTTTTTCTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHLRGS*FFWPTE
Trigger: TTCTGTGGGCCAGAAAAATCAGGAGCCACGTAGATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTCCTTGGTGCCGTTTaGAGCCAGGTAGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVLGAV*SQVEKK
Trigger: CTTCTTTTCTACCTGGCTTCAAACGGCACCAAGGAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTCCTTTGCAACACTaGTGTCATAGTAACAATCTT +
Preference number: 4 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSPLQH*CHSNNL
Trigger: AAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTCCAGATGGCAGATaGCAGAAAGGGAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSPDGR*QKGSHS
Trigger: AGAATGGCTCCCTTTCTGGCATCTGCCATCTGGAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTGTCACGTGAGGTTTaGAGTCACACAGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLSREV*SHTVQS
Trigger: AGACTGGACTGTGTGACTGCAAACCTCACGTGACAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGTGGTTGTTGCAATTaGAGGGCACACAAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCGCCN*RAHKEP
Trigger: TGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGATGCAGTCTCTGTCTaGAGACACGGCGACTTTGAT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLDAVSV*RHGDFD
Trigger: ATCAAAGTCGCCGTGTCTGCAGACAGAGACTGCATC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTGTCTTGACTGTGTaGCACTTGCCATCACTGAGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSVLTV*HLPSLS
Trigger: GCTCAGTGATGGCAAGTGGCACACAGTCAAGACAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGGACAGTCATCAGCTaGTCACGGTCAATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRTVIS*SRSISL
Trigger: AAGGGAGATTGACCGTGACCAGCTGATGACTGTCCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGCAATCCCTTCGAGCTaGATCTCTGCTCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLAIPSS*ISARIF
Trigger: GAAGATTCGAGCAGAGATCCAGCTCGAAGGGATTGC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGGTCGTTTGTCTCCTaGACTGTGGCATTCACTCTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRSFVS*TVAFTL
Trigger: CAGAGTGAATGCCACAGTCCAGGAGACAAACGACCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCTTCCGGTTCCGCTaGAAGGCGATTTTATACCAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCFRFR*KAILYQ
Trigger: CTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCAATCTCTAGGCCAATaGCATCCACTTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLQSLGQ*HPLWHC
Trigger: GCAGTGCCAAAGTGGATGCCATTGGCCTAGAGATTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTGCTTTTGTGGGCTTaGAGTGTGTGCCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLLLWA*SVCHLP
Trigger: TGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTCTACCCTTGGCAATaGGCTCTGAGGTCACATTTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLYPWQ*ALRSHF
Trigger: AAAATGTGACCTCAGAGCTCATTGCCAAGGGTAGAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCTTTGTAACCTTCCTTaGCAAGAGCTGCATATCCGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLCNLP*QELHIR
Trigger: GCGGATATGCAGCTCTTGTCAAGGAAGGTTACAAAG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGATCAACATTGCCACTaGAGTTGCATGGTACACAGG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLDQHCH*SCMVHR
Trigger: CCTGTGTACCATGCAACTGCAGTGGCAATGTTGATC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATCACTGTGGTTGTTaGAATTGCAGGGCACACAAG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHHCGC*NCRAHK
Trigger: CTTGTGTGCCCTGCAATTGCAACAACCACAGTGATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGAGATGTGTCACATTaGCCAGGACAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRDVSH*PGQSSA
Trigger: AGCTGATGACTGTCCTGGCCAATGTGACACATCTCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCCATTCTCAGGCGCTaGGGCATCCATATAAATGAC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSILRR*GIHIND
Trigger: GTCATTTATATGGATGCCCCAGCGCCTGAGAATGGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTTTTTCACTGTGGTTaGAAAGGAGGCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVFHCG*KGGCWP
Trigger: AGGCCAACAGCCTCCTTTCCAACCACAGTGAAAAAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGCAGCTTTTTCTCCTaGAATTCTTTCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRSFFS*NSFRLA
Trigger: GGCCAACCTGAAAGAATTCCAGGAGAAAAAGCTGCG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATAAATGGGATCGTTaGTGTCTGCCGAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHKWDR*CLPRWN
Trigger: ATTCCACCTCGGCAGACACCAACGATCCCATTTATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTGCCATTGATGAGTaGTGTGTGAATCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSAIDE*CVNLSM
Trigger: CATGGAGAGATTCACACATCACTCATCAATGGCAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTTTGGCTTTGTTGTaGCAGTTGCATTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSLALL*QLHSSH
Trigger: GTGTGAGGAATGCAACTGTCACAACAAAGCCAAAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTGCTAACACTCTGGTaGGCTCCTTTTGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVLTLW*APFADF
Trigger: AAAATCTGCAAAAGGAGCTCACCAGAGTGTTAGCAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR TCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTTGTAATTGGTAGATaGAGTCTGAGGCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVVIGR*SLRLIG
Trigger: GCCTATCAGCCTCAGACTTCATCTACCAATTACAAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCAGATTTTCTGTTTaGTCTGCAATCCCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCRFSV*SAIPSS
Trigger: GCTCGAAGGGATTGCAGAGCAAACAGAAAATCTGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCAAGTTGTAGAATCCTaGCTTGCAGCGATCACAGTT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLQVVES*LAAITV
Trigger: AACTGTGATCGCTGCAAGCCAGGATTCTACAACTTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTGCAGTTTTTCACTGTaGTTGGAAAGGAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLCSFSL*LERRLL
Trigger: CAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCATTGATGGAGACCTCTaGGAATTCCAACCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLIDGDL*EFQPCG
Trigger: TCCACAAGGTTGGAATTCCCAGAGGTCTCCATCAAT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACCTGGTTATGTAGATaGTGTGCCATCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTWLCR*CAICCY
Trigger: ATAACAACAGATGGCACAGCATCTACATAACCAGGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCTTTATCCAGCTGTTaGCCATTAACCATGATTTCC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSLSSC*PLTMIS
Trigger: GGAAATCATGGTTAATGGCCAACAGCTGGATAAAGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR GCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTTAATGATGATGTATaGAACTTGAAAGACCTGCCG +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLFNDDV*NLKDLP
Trigger: CGGCAGGTCTTTCAAGTTGCATACATCATCATTAAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CCA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCATAGTAACAATCTTTaGCTTTGTTGTGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLHSNNL*LCCDSC
Trigger: GCAACTGTCACAACAAAGCCAAAGATTGTTACTATG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp CTCGGCTCAGGTCCAAGGACTGCACTTGTGAGCCCCTGCTCAGCCTaGGGTTCCTCACACAGCCCCGGAATGAGGCCCGGCTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LGSGPRTALVSPCSA*GSSHSPGMRPGCSG
Trigger: GCCTGAGCAGCCGGGCCTCATTCCGGGGCTGTGTGAGGAACCTCAGGCTGAGCAGGGGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GGGGCCCACGGCATTCTCCTTGCAGGAGCAGGTACCACCGTCCTCTaGGCAGCTGCAGAGACCCTGTTCCAGGTCGCAGGTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GAHGILLAGAGTTVL*AAAETLFQVAGVRQ
Trigger: CTGCCTGACACCTGCGACCTGGAACAGGGTCTCTGCAGCTGCTCAGAGGACGGTGGTACCTGCTCCTGCAAGGAGAATGCCGTGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TCACAGACCCGGCATTGGGCGTGTCGAACAGGCCGGCCCGGCACGTaGTCCACGAGTTTGCAGAACATCTCAGGCCCCTTCTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: SQTRHWACRTGRPGT*STSLQNISGPFSPQ
Trigger: CTGTGGAGAGAAGGGGCCTGAGATGTTCTGCAAACTCGTGGAGCACGTGCCGGGCCGGCCTGTTCGACACGCCCAATGCCGGGTCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GAGGGTTGTCCCCTCGCAAGGCAAAGGTGCCGGCTTGGCACTTACTaGACTGGGGGCCCACGGCATTCTCCTTGCAGGAGCAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: EGCPLARQRCRLGTY*TGGPRHSPCRSRYH
Trigger: GTGGTACCTGCTCCTGCAAGGAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCAAGCCGGCACCTTTGCCTTGCGAGGGGACAACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGAAGGGCACATGTGCCTGAGCCCCACCAGCCTCCTCCGCATCCTTaGCCAGGGCAACCAGGAGGATTCCGCTGCTGTTCTTGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: RRAHVPEPHQPPPHP*PGQPGGFRCCSWWR
Trigger: TCGCCACCAAGAACAGCAGCGGAATCCTCCTGGTTGCCCTGGGCAAGGATGCGGAGGAGGCTGGTGGGGCTCAGGCACATGTGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TTGTCCCCTCGCAAGGCAAAGGTGCCGGCTTGGCACTTACTGCACTaGGGGCCCACGGCATTCTCCTTGCAGGAGCAGGTACCACCGTCC +
Preference number: 5 (lower is better)
Translates to: LSPRKAKVPAWHLLH*GPTAFSLQEQVPPS
Trigger: GGACGGTGGTACCTGCTCCTGCAAGGAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCAAGCCGGCACCTTTGCCTTGCGAGGGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CCAACTCTGAGCAGAGCTGCGACAGACCGAAGCAGAAGCAGGGGCTaGAGCCTTGAGGGTTGTCCCCTCGCAAGGCAAAGGTGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: PTLSRAATDRSRSRG*SLEGCPLARQRCRL
Trigger: AAGCCGGCACCTTTGCCTTGCGAGGGGACAACCCTCAAGGCTGCAGCCCCTGCTTCTGCTTCGGTCTGTCGCAGCTCTGCTCAGAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGAGAACATCACACTGGGCACTCGTGGAGCCCACAGCACTGCAATTaGAAGCCTGGCACCCCTGCTCCGGGTCCAGACCCCAGTATGCCT +
Preference number: 5 (lower is better)
Translates to: REHHTGHSWSPQHCN*KPGTPAPGPDPSMP
Trigger: AGGCATACTGGGGTCTGGACCCGGAGCAGGGGTGCCAGGCTTGCAATTGCAGTGCTGTGGGCTCCACGAGTGCCCAGTGTGATGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CTCTGTAGTACCCAGGAGCACAGTCCTGACAGGAGTGTCCTGCGGTaGCAGGAGGACAGACACAGAGCTCCAACAGCAATGCCGCCTCGC +
Preference number: 5 (lower is better)
Translates to: LCSTQEHSPDRSVLR*QEDRHRAPTAMPPR
Trigger: GCGAGGCGGCATTGCTGTTGGAGCTCTGTGTCTGTCCTCCTGGCACCGCAGGACACTCCTGTCAGGACTGTGCTCCTGGGTACTACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GCCCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTTGGGGGTTaGAATCACACGTTTGGCAGCTACCACCTGCTGCTCGAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: ARMHGHSHCGQSLGG*NHTFGSYHLLLEGC
Trigger: GCAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GAGCACCAAGTGGCTGTTCTGCGAGAGGCCAAACTGGTGAGCACCTaGCACATACCCCGGAGCCGTGTCTACTGCGCACAGTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EHQVAVLREAKLVST*HIPRSRVYCAQFRL
Trigger: CAGCCTGAACTGTGCGCAGTAGACACGGCTCCGGGGTATGTGGCAGGTGCTCACCAGTTTGGCCTCTCGCAGAACAGCCACTTGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp ACAGTGGAGCCCTGTAGCTCCTGGCTTGCAGACACACTGCCCGGATaGACGGTCACAGTCACTGTGGACAGAGCCTTGGGGGTTGCAATC +
Preference number: 5 (lower is better)
Translates to: TVEPCSSWLADTLPG*TVTVTVDRALGVAI
Trigger: GATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTCTGCAAGCCAGGAGCTACAGGGCTCCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GTCCAAAGCTCCTGCCCTGCTCTGCAGCTCAGAGGCATGCTGCTCTaGCCTGTGGACCAGGTCACGGGCTCTTCGTTTGGACATCTGCAT +
Preference number: 5 (lower is better)
Translates to: VQSSCPALQLRGMLL*PVDQVTGSSFGHLH
Trigger: ATGCAGATGTCCAAACGAAGAGCCCGTGACCTGGTCCACAGGGCAGAGCAGCATGCCTCTGAGCTGCAGAGCAGGGCAGGAGCTTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GGGAAGACTCCTTGTAGGTCAAAGGCTCGGCTCAGGTCCAAGGACTaGACTTGTGAGCCCCTGCTCAGCCTGAGGTTCCTCACACAGCCC +
Preference number: 5 (lower is better)
Translates to: GKTPCRSKARLRSKD*TCEPLLSLRFLTQP
Trigger: GGGCTGTGTGAGGAACCTCAGGCTGAGCAGGGGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAGCCTTTGACCTACAAGGAGTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GGCTCAAAGCCAGCACATCCTCCAGTGTCTTCACCGCACTCTCGTTaGCTGCTGCCGCCAGCTCTCTGGCTTTCCTGCCCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GSKPAHPPVSSPHSR*LLPPALWLSCPSLS
Trigger: TGAGAGAGAAGGGCAGGAAAGCCAGAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGAAGACACTGGAGGATGTGCTGGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GGCTGGGAAGGCCTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTaGTTGCATTGCCCACCACAGTCACACTGGGGGACTCTTGGCCGT +
Preference number: 5 (lower is better)
Translates to: GWEGLRGTVSFPHPA*LHCPPQSHWGTLGR
Trigger: ACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAGGCCTTCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TCAGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGTGGTTGTTaGAATTGCAGGGCACACAAGGAGCCAGCAGAGGGCGGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SGTFQFRGHRHHCGC*NCRAHKEPAEGGVP
Trigger: GGGGACCCCGCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GGGAAGGCCTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTGGTTaGATTGCCCACCACAGTCACACTGGGGGACTCTTGGCCGTCAAC +
Preference number: 5 (lower is better)
Translates to: GKASEVQFPFHIQRG*IAHHSHTGGLLAVN
Trigger: GTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAGGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp ACACACTGCCCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTTaGGGGTTGCAATCACACGTTTGGCAGCTACCACCTGCTGCTCGA +
Preference number: 5 (lower is better)
Translates to: THCPDARSQSLWTEP*GLQSHVWQLPPAAR
Trigger: TCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CATCCTTGCCCAGGGCAACCAGGAGGATTCCGCTGCTGTTCTTGGTaGCGAATGTGGCCAGCAGGGATGACTCAGGTGAGAGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: HPCPGQPGGFRCCSW*RMWPAGMTQVRETW
Trigger: CCAAGTCTCTCTCACCTGAGTCATCCCTGCTGGCCACATTCGCCACCAAGAACAGCAGCGGAATCCTCCTGGTTGCCCTGGGCAAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TTTTGTGGGCTTGGAGTGTGTGCCACTTGCCATCACAGAGAGCTCTaGCGGCTCTGGGCTGGTAGGTGGCTGTTATCCTTCCGGCACCGT +
Preference number: 5 (lower is better)
Translates to: FCGLGVCATCHHREL*RLWAGRWLLSFRHR
Trigger: ACGGTGCCGGAAGGATAACAGCCACCTACCAGCCCAGAGCCGCCAGAGCTCTCTGTGATGGCAAGTGGCACACACTCCAAGCCCACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GCAAGGTGTCAGGAGGCTGGAAATGCACGCCTTCGATTGTGCCCTTaGGGTTGCTCTGTGAAACCACATGCAGGAGGGGCTGATCGGAGG +
Preference number: 5 (lower is better)
Translates to: ARCQEAGNARLRLCP*GCSVKPHAGGADRR
Trigger: CCTCCGATCAGCCCCTCCTGCATGTGGTTTCACAGAGCAACCTCAAGGGCACAATCGAAGGCGTGCATTTCCAGCCTCCTGACACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GTCCGAATGCTCAGCTGCACCTGGAGCCTCTTCCGGACATCAGACTaGTTCAGAGGGAGCACCAAGTGGCTGTTCTGCGAGAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: VRMLSCTWSLFRTSD*FRGSTKWLFCERPN
Trigger: GTTTGGCCTCTCGCAGAACAGCCACTTGGTGCTCCCTCTGAATCAGTCTGATGTCCGGAAGAGGCTCCAGGTGCAGCTGAGCATTCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TGGCGGACAGCCTCTGCGTCCAGCAAGGTGTCAGGAGGCTGGAAATaGACGCCTTCGATTGTGCCCTTGAGGTTGCTCTGTGAAACCACA +
Preference number: 5 (lower is better)
Translates to: WRTASASSKVSGGWK*TPSIVPLRLLCETT
Trigger: TGTGGTTTCACAGAGCAACCTCAAGGGCACAATCGAAGGCGTGCATTTCCAGCCTCCTGACACCTTGCTGGACGCAGAGGCTGTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGCCAGAAGCACACAGCTCACAGTGGTCCCCGGATGTGTGGTCCCTaGAGCTCAGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGT +
Preference number: 5 (lower is better)
Translates to: SQKHTAHSGPRMCGP*SSGTFQFRGHRHHC
Trigger: ACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCTGAGCTGCAGGGACCACACATCCGGGGACCACTGTGAGCTGTGTGCTTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TTCAATTCGTCCCTCAAGCAGCATGATGGAAAAGAAGGGCACATGTaGCTGAGCCCCACCAGCCTCCTCCGCATCCTTGCCCAGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FNSSLKQHDGKEGHM*LSPTSLLRILAQGN
Trigger: GTTGCCCTGGGCAAGGATGCGGAGGAGGCTGGTGGGGCTCAGGCACATGTGCCCTTCTTTTCCATCATGCTGCTTGAGGGACGAATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGGGAGTTCCCCGTGTTCTCTGTGCAGACTCTGCATGGGCTCTTCTaGCAGCAAGCATGTGTCCAGCTCTACTTGCTCAGAGCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: REFPVFSVQTLHGLF*QQACVQLYLLRASR
Trigger: GCGACTGGCTCTGAGCAAGTAGAGCTGGACACATGCTTGCTGGCAGAAGAGCCCATGCAGAGTCTGCACAGAGAACACGGGGAACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GGCCTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTGGTTGCATTaGCCACCACAGTCACACTGGGGGACTCTTGGCCGTCAACAGTCA +
Preference number: 5 (lower is better)
Translates to: GLRGTVSFPHPAWLH*PPQSHWGTLGRQQS
Trigger: TGACTGTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CTGCAGCTCAGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGTaGTTGTTGCAATTGCAGGGCACACAAGGAGCCAGCAGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: LQLRHFPVSGSQTSL*LLQLQGTQGASRGR
Trigger: CCGCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCTGAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCCTCCTCCGCATCCTaGCCCAGGGCAACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVASSAS*PRATRR
Trigger: CCTCCTGGTTGCCCTGGGCAAGGATGCGGAGGAGGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTGCAGGCGGCCCTCTaGGAGCTGGAGCGTGGCGTA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVQAAL*ELERGV
Trigger: TACGCCACGCTCCAGCTCCAAGAGGGCCGCCTGCAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp TCACACAGCCCCGGAATGAGGCCCGGCTGCTCAGGCAGTTCTGTTTaGTGTGGGCAGGATAGCCACCCACATAAATGGGATCGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SHSPGMRPGCSGSSV*CGQDSHPHKWDRWC
Trigger: ACACCAACGATCCCATTTATGTGGGTGGCTATCCTGCCCACATCAAACAGAACTGCCTGAGCAGCCGGGCCTCATTCCGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp ACCGCCAAATGCTGTCAGCTTGTTTCCGAGGTAGGCCTCAGGAGCTaGCCAGTAGTAAGTGGAAGTCAGCCTCTGCATGACCGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: TAKCCQLVSEVGLRS*PVVSGSQPLHDRRV
Trigger: AACACGGCGGTCATGCAGAGGCTGACTTCCACTTACTACTGGGCAGCTCCTGAGGCCTACCTCGGAAACAAGCTGACAGCATTTGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CCGCCAGTAAAATGGCTCTGCATAGATATGCTGGCGGACAGCCTCTaGGTCCAGCAAGGTGTCAGGAGGCTGGAAATGCACGCCTTCGAT +
Preference number: 5 (lower is better)
Translates to: PPVKWLCIDMLADSL*VQQGVRRLEMHAFD
Trigger: ATCGAAGGCGTGCATTTCCAGCCTCCTGACACCTTGCTGGACGCAGAGGCTGTCCGCCAGCATATCTATGCAGAGCCATTTTACTGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TGCAGACGAAGGCGAATGTACCGTGCTGAGGTGAATTCCAGCAACTaGGGTGAGGGGTCGTCAGCGCTGGGTCTGCCATTGATGAGTGAT +
Preference number: 5 (lower is better)
Translates to: CRRRRMYRAEVNSSN*GEGSSALGLPLMSD
Trigger: ATCACTCATCAATGGCAGACCCAGCGCTGACGACCCCTCACCCCAGTTGCTGGAATTCACCTCAGCACGGTACATTCGCCTTCGTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GGCCGGAGCGTCTTCTCCACCATGGCGTACCCGCTTCCATCGAAATaGAAGGAGGAATCTTCGTTCTGGGAGCTTCCAAAGCAGCCATTG +
Preference number: 5 (lower is better)
Translates to: GRSVFSTMAYPLPSK*KEESSFWELPKQPL
Trigger: CAATGGCTGCTTTGGAAGCTCCCAGAACGAAGATTCCTCCTTCCATTTCGATGGAAGCGGGTACGCCATGGTGGAGAAGACGCTCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TGGTGGCGAATGTGGCCAGCAGGGATGACTCAGGTGAGAGAGACTTaGGTGGCATCTCCACATAGCCGCCTCTCAGGAAACTCACACTCT +
Preference number: 5 (lower is better)
Translates to: WWRMWPAGMTQVRET*VASPHSRLSGNSHS
Trigger: AGAGTGTGAGTTTCCTGAGAGGCGGCTATGTGGAGATGCCACCCAAGTCTCTCTCACCTGAGTCATCCCTGCTGGCCACATTCGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCAGGGGCTGCAGCCTaGAGGGTTGTCCCCTCGCAA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVAGAAA*RVVPSQ
Trigger: TTGCGAGGGGACAACCCTCAAGGCTGCAGCCCCTGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GGACAGCACCTGTCGCAGCTCTCGCCACACGTATTGTGTTCACACTaGCACTGTAGTTGCTTTGCTTCTTCATCCCACGGGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQHLSQLSPHVLCSH*HCSCFASSSHGQLL
Trigger: CAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTCAGTGTGAACACAATACGTGTGGCGAGAGCTGCGACAGGTGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GTGGAAGTCAGCCTCTGCATGACCGCCGTGTTGTTGATGCTGATCTaGCGGTGCCCACCCAGGACATCTTGCTGGGACCGGATCTTATTT +
Preference number: 5 (lower is better)
Translates to: VEVSLCMTAVLLMLI*RCPPRTSCWDRILF
Trigger: AAATAAGATCCGGTCCCAGCAAGATGTCCTGGGTGGGCACCGTCAGATCAGCATCAACAACACGGCGGTCATGCAGAGGCTGACTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp TCCTTGATGAGTCCCAGCAGAGACGAAATGTTCTGGTGCATGCTCTaGAGGGCAGACACGGGTGGCTGGAAATCTTTACGCGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SLMSPSRDEMFWCML*RADTGGWKSLRAVW
Trigger: CCAGACGGCGCGTAAAGATTTCCAGCCACCCGTGTCTGCCCTTCAGAGCATGCACCAGAACATTTCGTCTCTGCTGGGACTCATCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GTGGTATTCTGCGAGCAGTTGACACAAACCCCTCCTCCACTGTACTaGCCGGCAGTGTTCAGGCTTCTCCTCTCCTTTGCAACACTGCTG +
Preference number: 5 (lower is better)
Translates to: VVFCEQLTQTPPPLY*PAVFRLLLSFATLL
Trigger: CAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACAGTGGAGGAGGGGTTTGTGTCAACTGCTCGCAGAATACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGTCACAGTGGCCAGCCTCCAAGGGATCAACATTGCCACTGCAGTTaGATGGTACACAGGTTCCCCCTGGCACGGTTGGGTTTCCATAGT +
Preference number: 5 (lower is better)
Translates to: SHSGQPPRDQHCHCS*MVHRFPLARLGFHS
Trigger: ACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TGCAGGAGGGCCTTCCTCAGACTGGTCCCGTCCCCAGAGTTGACATaGACTTCAATTCGTCCCTCAAGCAGCATGATGGAAAAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CRRAFLRLVPSPELT*TSIRPSSSMMEKKG
Trigger: GCCCTTCTTTTCCATCATGCTGCTTGAGGGACGAATTGAAGTGCATGTCAACTCTGGGGACGGGACCAGTCTGAGGAAGGCCCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CTTTCAGCCCTAACGGAATTCCCGTCCACAGTCAGGACGATGCGGTaGTTGCTTTTGTGGGCTTGGAGTGTGTGCCACTTGCCATCACAG +
Preference number: 5 (lower is better)
Translates to: LSALTEFPSTVRTMR*LLLWAWSVCHLPSQ
Trigger: CTGTGATGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAATTCCGTTAGGGCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GATGTGGGCAGGATAGCCACCCACATAAATGGGATCGTTGGTGTCTaGCGAGGTGGAATGGGTGTGGGGGCTTTCAGCCCTAACGGAATT +
Preference number: 5 (lower is better)
Translates to: DVGRIATHINGIVGV*RGGMGVGAFSPNGI
Trigger: AATTCCGTTAGGGCTGAAAGCCCCCACACCCATTCCACCTCGGCAGACACCAACGATCCCATTTATGTGGGTGGCTATCCTGCCCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CTCATTCAGGCTGCCGACAGTCCTGCAGTCACAGGGGATGCAATTTaGGAAACCCCGGTAGCCAAACTGGCAGCGGTCACATTTATCTCC +
Preference number: 5 (lower is better)
Translates to: LIQAADSPAVTGDAI*ETPVAKLAAVTFIS
Trigger: GGAGATAAATGTGACCGCTGCCAGTTTGGCTACCGGGGTTTCCCAAATTGCATCCCCTGTGACTGCAGGACTGTCGGCAGCCTGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CCCGGGGCACACTGGTCACAAACCACTTCCTCTCCATCAGTGAGGTaGCAGGTAGGGCTGAAATTGTTAGAGTCAATGGAGAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGAHWSQTTSSPSVR*QVGLKLLESMERGQ
Trigger: CTGCCCTCTCTCCATTGACTCTAACAATTTCAGCCCTACCTGCCACCTCACTGATGGAGAGGAAGTGGTTTGTGACCAGTGTGCCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp ACAGTGGCCAGCCTCCAAGGGATCAACATTGCCACTGCAGTTGCATaGTACACAGGTTCCCCCTGGCACGGTTGGGTTTCCATAGTAACC +
Preference number: 5 (lower is better)
Translates to: TVASLQGINIATAVA*YTGSPWHGWVSIVT
Trigger: GGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GTGCTCATCAAGTCAGTGACCAGCCACCCTGACATATTGGTCACCTaGCTAATGGACCACGTGAGGCTGTCACAGACACCAGAGACACCG +
Preference number: 5 (lower is better)
Translates to: VLIKSVTSHPDILVT*LMDHVRLSQTPETP
Trigger: CGGTGTCTCTGGTGTCTGTGACAGCCTCACGTGGTCCATTAGTCAGGTGACCAATATGTCAGGGTGGCTGGTCACTGACTTGATGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CGATGGCTAAGGGTCATGAGGTCTGCGTTGAGTGTTCTGATGCGCTaGAGACGAAGGCGAATGTACCGTGCTGAGGTGAATTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RWLRVMRSALSVLMR*RRRRMYRAEVNSSN
Trigger: GTTGCTGGAATTCACCTCAGCACGGTACATTCGCCTTCGTCTGCAGCGCATCAGAACACTCAACGCAGACCTCATGACCCTTAGCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GTTTCCCAGAGACACCTGGTCCACAGTGACACTGTCCTTCCTCCGTaGAGTTGTCAGATACAGAGCCTTCCACACTGCAGTTACAGGGCA +
Preference number: 5 (lower is better)
Translates to: VSQRHLVHSDTVLPP*SCQIQSLPHCSYRA
Trigger: TGCCCTGTAACTGCAGTGTGGAAGGCTCTGTATCTGACAACTGCACGGAGGAAGGACAGTGTCACTGTGGACCAGGTGTCTCTGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GGTTGCAATCACACGTTTGGCAGCTACCACCTGCTGCTCGAGGGTTaGCGTGATAGCCTGCAGAGCACCTTTCACAGTACTGTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GCNHTFGSYHLLLEG*RDSLQSTFHSTVLH
Trigger: ATGAAGGACAGTACTGTGAAAGGTGCTCTGCAGGCTATCACGGCAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CTCTGCCACCAGTTGTTGGTGCCATCGATTGCGTGTGATATCGGATaGCGCTCTCTAGGATTCGTACTGTTACCGTCACAGACCCGGCAT +
Preference number: 5 (lower is better)
Translates to: LCHQLLVPSIACDIG*RSLGFVLLPSQTRH
Trigger: ATGCCGGGTCTGTGACGGTAACAGTACGAATCCTAGAGAGCGCCATCCGATATCACACGCAATCGATGGCACCAACAACTGGTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GCAGATGACTTCGTTGTCTGCTCTGTAAGTGGGAGGTCCCCGCCGTaGAGTTATTTTGTAGCGGGTCAAACACTCTGTATCGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: ADDFVVCSVSGRSPP*SYFVAGQTLCIADG
Trigger: GCCGTCAGCGATACAGAGTGTTTGACCCGCTACAAAATAACTCCACGGCGGGGACCTCCCACTTACAGAGCAGACAACGAAGTCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GAATTACTATCTGCGTCACGGTGGGCCGGAGCGTCTTCTCCACCATaGCGTACCCGCTTCCATCGAAATGGAAGGAGGAATCTTCGTTCT +
Preference number: 5 (lower is better)
Translates to: ELLSASRWAGASSPP*RTRFHRNGRRNLRS
Trigger: AGAACGAAGATTCCTCCTTCCATTTCGATGGAAGCGGGTACGCCATGGTGGAGAAGACGCTCCGGCCCACCGTGACGCAGATAGTAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp CTCCATGTTCAAGTGGCACCAGCTTTGAATAATACGAGGTGCAGATaGCTTCGTTGTCTGCTCTGTAAGTGGGAGGTCCCCGCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LHVQVAPALNNTRCR*LRCLLCKWEVPAVE
Trigger: CTCCACGGCGGGGACCTCCCACTTACAGAGCAGACAACGAAGTCATCTGCACCTCGTATTATTCAAAGCTGGTGCCACTTGAACATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GACCTGGCCACTTTCCATTGGCTAAATCGGCATGGCGGTCATCCTTaGTACAGACAGAACTCAGAGACCCCACAGGGTCACAGTTACAGG +
Preference number: 5 (lower is better)
Translates to: DLATFHWLNRHGGHP*YRQNSETPQGHSYR
Trigger: CCTGTAACTGTGACCCTGTGGGGTCTCTGAGTTCTGTCTGTATCAAGGATGACCGCCATGCCGATTTAGCCAATGGAAAGTGGCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GAAGCCAGGGATTCGGAGATCAAGTCTGTCTTATTCGCCGTCTTGTaGGCATCAGCAGCCAGCATCTCAGCTTCCTCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: EARDSEIKSVLFAVL*ASAASISASSVSVW
Trigger: CCAGACACTGACAGAGGAAGCTGAGATGCTGGCTGCTGATGCTCACAAGACGGCGAATAAGACAGACTTGATCTCCGAATCCCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp AATGAGGCAATCCACCCACGTAAATCAGGTCTTTCTCCAGCCGATTaGGGTCGGAAGCGGCTCCTGGAGTCTCTCCTTGCTTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: NEAIHPRKSGLSPAD*GRKRLLESLLALSP
Trigger: AGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGACCTCAATCGGCTGGAGAAAGACCTGATTTACGTGGGTGGATTGCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GGAGCGTGGCGTAGTCCATTTGGTTCTGATGAGCCACATAGTAAATaGGGCCACTGGAGGCAAATGTCCGAATGCTCAGCTGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: GAWRSPFGSDEPHSK*GHWRQMSECSAAPG
Trigger: TCCAGGTGCAGCTGAGCATTCGGACATTTGCCTCCAGTGGCCTCATTTACTATGTGGCTCATCAGAACCAAATGGACTACGCCACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp CGGCTCTGGGCTGGTAGGTGGCTGTTATCCTTCCGGCACCGTTGTTaGCGTGAAATAAGACCTTGCCATCTACAATCTCTAGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: RLWAGRWLLSFRHRC*REIRPCHLQSLGQW
Trigger: CCATTGGCCTAGAGATTGTAGATGGCAAGGTCTTATTTCACGTCAACAACGGTGCCGGAAGGATAACAGCCACCTACCAGCCCAGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CACACTGACACTGTAGTTGCTTTGCTTCTTCATCCCACGGGCAGCTaGTGGCATGGCCGTAGCAAATGCACATGCCTCCAACGGAAATGT +
Preference number: 5 (lower is better)
Translates to: HTDTVVALLLHPTGS*WHGRSKCTCLQRKC
Trigger: ACATTTCCGTTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TCCAGGAGATTTGCTTGTCCTGACCGGTGGGTTCTCGGCAGCGCTTaGTTCCTTTACACTCAGGGACCCCATGTTTCCAAACCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: SRRFACPDRWVLGSA*FLYTQGPHVSKPGY
Trigger: ATAACCAGGTTTGGAAACATGGGGTCCCTGAGTGTAAAGGAAGCAAGCGCTGCCGAGAACCCACCGGTCAGGACAAGCAAATCTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp ATTGCCACTGCAGTTGCATGGTACACAGGTTCCCCCTGGCACGGTTaGGTTTCCATAGTAACCATCTGCACATCTCTCACACCAGGATCC +
Preference number: 5 (lower is better)
Translates to: IATAVAWYTGSPWHG*VSIVTICTSLTPGS
Trigger: GGATCCTGGTGTGAGAGATGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GTGTTCCATAAGCACTTCAGGCATTCCCCTGTGACAGAGTCACAGTaGCCAGCCTCCAAGGGATCAACATTGCCACTGCAGTTGCATGGT +
Preference number: 5 (lower is better)
Translates to: VFHKHFRHSPVTESQ*PASKGSTLPLQLHG
Trigger: ACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGTGACTCTGTCACAGGGGAATGCCTGAAGTGCTTATGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GCAGCCAGCATCTCAGCTTCCTCTGTCAGTGTCTGGATGTTGCTGTaGACGTGTGCCGCACTGGTGGCATTCAAAGACACGTTTCTAACA +
Preference number: 5 (lower is better)
Translates to: AASISASSVSVWMLL*TCAALVAFKDTFLT
Trigger: TGTTAGAAACGTGTCTTTGAATGCCACCAGTGCGGCACACGTCCACAGCAACATCCAGACACTGACAGAGGAAGCTGAGATGCTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp ATGGCGTACCCGCTTCCATCGAAATGGAAGGAGGAATCTTCGTTCTaGGAGCTTCCAAAGCAGCCATTGCACTTCCCCTCTCTCTCGATG +
Preference number: 5 (lower is better)
Translates to: MAYPLPSKWKEESSF*ELPKQPLHFPSLSM
Trigger: CATCGAGAGAGAGGGGAAGTGCAATGGCTGCTTTGGAAGCTCCCAGAACGAAGATTCCTCCTTCCATTTCGATGGAAGCGGGTACGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCACATCCAGCGTGGTaGCATTGCCCACCACAGTCA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPHPAW*HCPPQS
Trigger: TGACTGTGGTGGGCAATGCAACCACGCTGGATGTGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp TTTCCAGATTTTCCAGGATTCCATAGGGAGCAGGGGAAACGCCCGTaGGGTTCAGAGACAGAACGGCATCACCAACAGAATCCAGGTCGT +
Preference number: 5 (lower is better)
Translates to: FPDFPGFHREQGKRP*GSETERHHQQNPGR
Trigger: ACGACCTGGATTCTGTTGGTGATGCCGTTCTGTCTCTGAACCTCACGGGCGTTTCCCCTGCTCCCTATGGAATCCTGGAAAATCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp ACTGACACTGTAGTTGCTTTGCTTCTTCATCCCACGGGCAGCTGCTaGCATGGCCGTAGCAAATGCACATGCCTCCAACGGAAATGTCTT +
Preference number: 5 (lower is better)
Translates to: TDTVVALLLHPTGSC*HGRSKCTCLQRKCL
Trigger: AAGACATTTCCGTTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GGGATCAACATTGCCACTGCAGTTGCATGGTACACAGGTTCCCCCTaGCACGGTTGGGTTTCCATAGTAACCATCTGCACATCTCTCACA +
Preference number: 5 (lower is better)
Translates to: GINIATAVAWYTGSP*HGWVSIVTICTSLT
Trigger: TGTGAGAGATGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TTTCATCCGCACTTCGTAATCCTGTCTCACTCCATTCTCAGGCGCTaGGGCATCCATATAAATGACGTGCTTCCTGGCCCGACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FHPHFVILSHSILRR*GIHINDVLPGPTSF
Trigger: AAAGGAGGTCGGGCCAGGAAGCACGTCATTTATATGGATGCCCCAGCGCCTGAGAATGGAGTGAGACAGGATTACGAAGTGCGGATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TCCAGCGTGGTTGCATTGCCCACCACAGTCACACTGGGGGACTCTTaGCCGTCAACAGTCATGAACGCCTTCCTTTTAATGTATTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSVVALPTTVTLGDS*PSTVMNAFLLMYSV
Trigger: GACAGAATACATTAAAAGGAAGGCGTTCATGACTGTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTCTGCCACCAGTTGTaGGTGCCATCGATTGCGTGT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLCHQL*VPSIAC
Trigger: ACACGCAATCGATGGCACCAACAACTGGTGGCAGAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTATTCCTCATAGGGTaGCAAGGACAGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVFLIG*QGQALS
Trigger: GCTGAGGGCCTGTCCTTGCAACCCTATGAGGAATAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTGTGGTTGTTGCAATaGCAGGGCACACAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLWLLQ*QGTQGA
Trigger: GGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTTGCAATCACACGTTaGGCAGCTACCACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVAITR*AATTCC
Trigger: GCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACTGTGGACAGAGCCTaGGGGGTTGCAATCACACGT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTVDRA*GVAITR
Trigger: ACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTTTCAGGTTGGCCTaGACAAGGAGCAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSFRLA*TRSSRR
Trigger: CCTCCTGCTGCTCCTTGTCAAGGCCAACCTGAAAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTTCCAAAGCAGCCATaGCACTTCCCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLPKQP*HFPSLS
Trigger: CGAGAGAGAGGGGAAGTGCAATGGCTGCTTTGGAAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGGAGTGTGTGCCACTaGCCATCACAGAGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVWSVCH*PSQRAL
Trigger: CAGAGCTCTCTGTGATGGCAAGTGGCACACACTCCA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GGACCGGATCTTATTTGTGCTCATCAAGTCAGTGACCAGCCACCCTaGCATATTGGTCACCTGACTAATGGACCACGTGAGGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: GPDLICAHQVSDQPP*HIGHLTNGPREAVT
Trigger: TGTGACAGCCTCACGTGGTCCATTAGTCAGGTGACCAATATGTCAGGGTGGCTGGTCACTGACTTGATGAGCACAAATAAGATCCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp CTCCTGCGTCTTCACGTTCAGGATCAAGGTGTTGTAATTGGTAGATaGAGTCTGAGGCTGATAGGCGCGGATGCAGTCTCTGTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLRLHVQDQGVVIGR*SLRLIGADAVSVCR
Trigger: TCTGCAGACAGAGACTGCATCCGCGCCTATCAGCCTCAGACTTCATCTACCAATTACAACACCTTGATCCTGAACGTGAAGACGCAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CGTGTAGCCTTGGGGACATTCACAGTGTTCCACATCAGCAGCCACTaGCAAGTCTATAGCATTAGGGCTTGCTATGTCCAGAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: RVALGTFTVFHISSH*QVYSIRACYVQRDR
Trigger: TCTGTCTCTCTGGACATAGCAAGCCCTAATGCTATAGACTTGGCAGTGGCTGCTGATGTGGAACACTGTGAATGTCCCCAAGGCTACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TCCTTGTCACTGGTGTCATATGCATCGAAGACAGCTAGCAGTCCTTaGTTCCGGTTCCGCTGGAAGGCGATTTTATACCAGGTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: SLSLVSYASKTASSP*FRFRWKAILYQVPL
Trigger: CAACGGAACCTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCAAGGACTGCTAGCTGTCTTCGATGCATATGACACCAGTGACAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GCTCTGATCAAGAGATGTGTCACATTGGCCAGGACAGTCATCAGCTaGTCACGGTCAATCTCCCTTCTGGTATCAAAGTCCCGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ALIKRCVTLARTVIS*SRSISLLVSKSRKF
Trigger: GAACTTCCGGGACTTTGATACCAGAAGGGAGATTGACCGTGACCAGCTGATGACTGTCCTGGCCAATGTGACACATCTCTTGATCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CCTCAGCAGCCTGCAGTTTTTCACTGTGGTTGGAAAGGAGGCTGTTaGCCTCCTTCAATGCCTTCAACTTTTCCTGAGGCTTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: PQQPAVFHCGWKGGC*PPSMPSTFPEASET
Trigger: GGTTTCAGAAGCCTCAGGAAAAGTTGAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCAGGCTGCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTGTTGGTGCCATCGATaGCGTGTGATATCGGATGGC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVCWCHR*RVISDG
Trigger: GCCATCCGATATCACACGCAATCGATGGCACCAACA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGTATTCTGCGAGCAGTaGACACAAACCCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVVFCEQ*TQTPPP
Trigger: TGGAGGAGGGGTTTGTGTCAACTGCTCGCAGAATAC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCCTTCGATTGTGCCCTaGAGGTTGCTCTGTGAAACC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVPSIVP*RLLCET
Trigger: GGTTTCACAGAGCAACCTCAAGGGCACAATCGAAGG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTCCCTGGAACTGCTTaGGTAGCCGCCAGTAAAATG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLPGTA*VAASKM
Trigger: CATTTTACTGGCGGCTACCAAAGCAGTTCCAGGGAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTGGAAAGGAGGCTGTaGGCCTCCTTCAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLERRL*ASFNAF
Trigger: GAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTGCTCTCCTGGGTCTaGCTTCCAGCTTCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLLSWV*LPASLR
Trigger: CCTTAAGGAAGCTGGAAGCAAGACCCAGGAGAGCAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp AGTCCCGGCAGCATCCACCCATTCTCTACCCTTGGCAATGAGCTCTaGGGTCACATTTTGTTCTTCTTGAACACGCAGCTTTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPGSIHPFSTLGNEL*GHILFFLNTQLFLL
Trigger: CAGGAGAAAAAGCTGCGTGTTCAAGAAGAACAAAATGTGACCTCAGAGCTCATTGCCAAGGGTAGAGAATGGGTGGATGCTGCCGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CACATAGCCGCCTCTCAGGAAACTCACACTCTGGATAGGCTCCAGTaGGCAGCCTTTTCTCACTCCGTAGGAATTTCTCAGCAAATCAAA +
Preference number: 5 (lower is better)
Translates to: HIAASQETHTLDRLQ*AAFSHSVGISQQIK
Trigger: TTTGATTTGCTGAGAAATTCCTACGGAGTGAGAAAAGGCTGCGCACTGGAGCCTATCCAGAGTGTGAGTTTCCTGAGAGGCGGCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp TCATATGCATCGAAGACAGCTAGCAGTCCTTGCTTCCGGTTCCGCTaGAAGGCGATTTTATACCAGGTTCCGTTGTTATACCGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: SYASKTASSPCFRFR*KAILYQVPLLYRLS
Trigger: AGACAGGCGGTATAACAACGGAACCTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCAAGGACTGCTAGCTGTCTTCGATGCATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGCATGGCGGTCATCCTaGATACAGACAGAACTCAGA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVAWRSS*IQTELR
Trigger: TCTGAGTTCTGTCTGTATCAAGGATGACCGCCATGC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAAGAGATGTGTCACATaGGCCAGGACAGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVKRCVT*ARTVIS
Trigger: GCTGATGACTGTCCTGGCCAATGTGACACATCTCTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCCCACAGCACTGCAATaGCAAGCCTGGCACCCCTGC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLPTALQ*QAWHPC
Trigger: GCAGGGGTGCCAGGCTTGCAATTGCAGTGCTGTGGG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACCTCCATGGAAATGTaGGCAATTCTGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTSMEM*AILLCC
Trigger: GCAGCAGAGCAGAATTGCCAACATTTCCATGGAGGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGTTTTTCACTGTGGTaGGAAAGGAGGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSFSLW*ERRLLA
Trigger: GGCCAACAGCCTCCTTTCCAACCACAGTGAAAAACT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCTTCATCGTAATGCCTaGCTGCTTCCTCCTGGTACT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLHRNA*LLPPGT
Trigger: AGTACCAGGAGGAAGCAGCAAGGCATTACGATGAAG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTATGCAGAAGGTCGTTaGTCTCCTGGACTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVYAEGR*SPGLWH
Trigger: ATGCCACAGTCCAGGAGACAAACGACCTTCTGCATA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTGAGTCTCTCCTTGCTTaGTCTCCTTGTCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVESLLA*SPCHWC
Trigger: ACACCAGTGACAAGGAGACAAAGCAAGGAGAGACTC...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCCTGGAGTCTCTCCTaGCTTTGTCTCCTTGTCACT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSWSLS*LCLLVT
Trigger: AGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCGTGGCGTAGTCCATTaGGTTCTGATGAGCCACATA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRGVVH*VLMSHI
Trigger: TATGTGGCTCATCAGAACCAAATGGACTACGCCACG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CTTCATCCCACGGGCAGCTGCTGGCATGGCCGTAGCAAATGCACATaGCTCCAACGGAAATGTCTTTTATCGAATAGTAATAACGTCTTG +
Preference number: 5 (lower is better)
Translates to: LHPTGSCWHGRSKCT*LQRKCLLSNSNNVL
Trigger: CAAGACGTTATTACTATTCGATAAAAGACATTTCCGTTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TCCTCCACTGTACTGCCCGGCAGTGTTCAGGCTTCTCCTCTCCTTTaGAACACTGCTGTCATAGTAACAATCTTTGGCTTTGTTGTGACA +
Preference number: 5 (lower is better)
Translates to: SSTVLPGSVQASPLL*NTAVIVTIFGFVVT
Trigger: TGTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACAGTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp GTGTTCCACATCAGCAGCCACTGCCAAGTCTATAGCATTAGGGCTTaGTATGTCCAGAGAGACAGAATCCAGCCTATAGAGCGCCATTTT +
Preference number: 5 (lower is better)
Translates to: VFHISSHCQVYSIRA*YVQRDRIQPIERHF
Trigger: AAAATGGCGCTCTATAGGCTGGATTCTGTCTCTCTGGACATAGCAAGCCCTAATGCTATAGACTTGGCAGTGGCTGCTGATGTGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp CATCTCAGCTTCCTCTGTCAGTGTCTGGATGTTGCTGTGGACGTGTaGCGCACTGGTGGCATTCAAAGACACGTTTCTAACATTTTCAAG +
Preference number: 5 (lower is better)
Translates to: HLSFLCQCLDVAVDV*RTGGIQRHVSNIFK
Trigger: CTTGAAAATGTTAGAAACGTGTCTTTGAATGCCACCAGTGCGGCACACGTCCACAGCAACATCCAGACACTGACAGAGGAAGCTGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AATGGAAGGAGGAATCTTCGTTCTGGGAGCTTCCAAAGCAGCCATTaGACTTCCCCTCTCTCTCGATGTAATTCCACAGGCCAATCGATT +
Preference number: 5 (lower is better)
Translates to: NGRRNLRSGSFQSSH*TSPLSRCNSTGQSI
Trigger: AATCGATTGGCCTGTGGAATTACATCGAGAGAGAGGGGAAGTGCAATGGCTGCTTTGGAAGCTCCCAGAACGAAGATTCCTCCTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GGCTTCTCCTCTCCTTTGCAACACTGCTGTCATAGTAACAATCTTTaGCTTTGTTGTGACAGTTGCATTCCTCACACTCGTTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GFSSPLQHCCHSNNL*LCCDSCIPHTRCRR
Trigger: CCTCCGGCAACGAGTGTGAGGAATGCAACTGTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp CTCGGAGCAGCCCTCGGGGTTTCGTTCCTTCAAGTTGTAGAATCCTaGCTTGCAGCGATCACAGTTCTTACCCTCAACATTTTTCTTACA +
Preference number: 5 (lower is better)
Translates to: LGAALGVSFLQVVES*LAAITVLTLNIFLT
Trigger: TGTAAGAAAAATGTTGAGGGTAAGAACTGTGATCGCTGCAAGCCAGGATTCTACAACTTGAAGGAACGAAACCCCGAGGGCTGCTCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 90 bp GATGATGTCAGCATGAGACATGAGGTCACTGTCCACCGTCTCCACTaGAATGTCGTAAGACACAGTGTATTTCAGGAAACCGCCAAATGC +
Preference number: 5 (lower is better)
Translates to: DDVSMRHEVTVHRLH*NVVRHSVFQETAKC
Trigger: GCATTTGGCGGTTTCCTGAAATACACTGTGTCTTACGACATTCCAGTGGAGACGGTGGACAGTGACCTCATGTCTCATGCTGACATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGGCTCTGCCACCAGTaGTTGGTGCCATCGATTGCG +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGLCHQ*LVPSIA
Trigger: CGCAATCGATGGCACCAACAACTGGTGGCAGAGCCC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTACATCACTGTGGTTGTaGCAATTGCAGGGCACACAA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVTSLWL*QLQGTQ
Trigger: TTGTGTGCCCTGCAATTGCAACAACCACAGTGATGT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAGGTCCTCTGATGTATaGAAGACCCTCAGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVRSSDV*KTLRLK
Trigger: TTTGAGCCTGAGGGTCTTCAATACATCAGAGGACCT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTATACCAGGTTCCGTaGTTATACCGCCTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLYQVP*LYRLSV
Trigger: GACAGACAGGCGGTATAACAACGGAACCTGGTATAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp GGATTTCTTGATCTGACCTCCGAGCCCTCCAACAAACATCAGCGTTaGATTGTTTATGTCCAGAACCTTCGACGGTCCAGGAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: GFLDLTSEPSNKHQR*IVYVQNLRRSRRFA
Trigger: AGCAAATCTCCTGGACCGTCGAAGGTTCTGGACATAAACAATTCAACGCTGATGTTTGTTGGAGGGCTCGGAGGTCAGATCAAGAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACGTGCTCCACGAGTTaGCAGAACATCTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTCSTS*QNISGP
Trigger: GGGGCCTGAGATGTTCTGCAAACTCGTGGAGCACGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGGTCCCCGTGTAGCCTaGGGGACATTCACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLGPRVA*GTFTVF
Trigger: GAACACTGTGAATGTCCCCAAGGCTACACGGGGACC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCAGGTAGGGCTGAAATaGTTAGAGTCAATGGAGAGA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVQVGLK*LESMER
Trigger: TCTCTCCATTGACTCTAACAATTTCAGCCCTACCTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTGCAGATTTTCTGTTaGCTCTGCAATCCCTTCGAG +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLQIFC*LCNPFE
Trigger: CTCGAAGGGATTGCAGAGCAAACAGAAAATCTGCAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCTGGTGAGCTCCTTTaGCAGATTTTCTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSGELL*QIFCLL
Trigger: GAGCAAACAGAAAATCTGCAAAAGGAGCTCACCAGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCAGGAGCAGCAGGAGGTaGCTCTCCTGGGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRSSRR*LSWVLL
Trigger: AAGCAAGACCCAGGAGAGCAACCTCCTGCTGCTCCT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTCAGTGTCTGGATGTaGCTGTGGACGTGTGCCGCA +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVSVWM*LWTCAA
Trigger: TGCGGCACACGTCCACAGCAACATCCAGACACTGAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTATGCTGTGCCATCTGTaGTTATTGATGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVMLCHL*LLMETS
Trigger: AGAGGTCTCCATCAATAACAACAGATGGCACAGCAT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp TTTCCATTTCAGCGTTCACCTTCTGATGGCGTGCTAACACTCTGGTaGGCTCCTTTTGCAGATTTTCTGTTTGCTCTGCAATCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: FPFQRSPSDGVLTLW*APFADFLFALQSLR
Trigger: TCGAAGGGATTGCAGAGCAAACAGAAAATCTGCAAAAGGAGCTCACCAGAGTGTTAGCACGCCATCAGAAGGTGAACGCTGAAATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp TGTACTGCCCGGCAGTGTTCAGGCTTCTCCTCTCCTTTGCAACACTaGTGTCATAGTAACAATCTTTGGCTTTGTTGTGACAGTTGCATT +
Preference number: 5 (lower is better)
Translates to: CTARQCSGFSSPLQH*CHSNNLWLCCDSCI
Trigger: AATGCAACTGTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 90 bp AGCAGCCCTCGGGGTTTCGTTCCTTCAAGTTGTAGAATCCTGGCTTaGAGCGATCACAGTTCTTACCCTCAACATTTTTCTTACAAAGAC +
Preference number: 5 (lower is better)
Translates to: SSPRGFVPSSCRILA*SDHSSYPQHFSYKD
Trigger: GTCTTTGTAAGAAAAATGTTGAGGGTAAGAACTGTGATCGCTGCAAGCCAGGATTCTACAACTTGAAGGAACGAAACCCCGAGGGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCCAGGCCGAGGGGCATaGGCAGCTTTAATGATGATG +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLPGRGA*AALMMM
Trigger: CATCATCATTAAAGCTGCCAATGCCCCTCGGCCTGG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTCCTTTGATGAGGACTaGAGGCTCATAATTGGATGT +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVSFDED*RLIIGC
Trigger: ACATCCAATTATGAGCCTCAAGTCCTCATCAAAGGA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACAGAGCCTTGGGGGTaGCAATCACACGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTEPWG*QSHVWQ
Trigger: CTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGAACGTGGCCAGGGCTaGAGTCCCATTGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLERGQG*SPIGSS
Trigger: AGAACTTCCAATGGGACTCAAGCCCTGGCCACGTTC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTGACTGTGTGCCACTaGCCATCACTGAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLLTVCH*PSLSRA
Trigger: TGCCCTGCTCAGTGATGGCAAGTGGCACACAGTCAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTTTAATGTATTCTGTCTaGACTGTGTGCCACTTGCCA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVLMYSV*TVCHLP
Trigger: TGGCAAGTGGCACACAGTCAAGACAGAATACATTAA...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 90 bp CATGGAAATGTTGGCAATTCTGCTCTGCTGCAGTCCCTGGCCGTATaGTGCTTTGATGAGGATGTAGTCAATATTGCTGAGAACAGACAT +
Preference number: 5 (lower is better)
Translates to: HGNVGNSALLQSLAV*CFDEDVVNIAENRH
Trigger: ATGTCTGTTCTCAGCAATATTGACTACATCCTCATCAAAGCATCATACGGCCAGGGACTGCAGCAGAGCAGAATTGCCAACATTTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGACACTGTAGTTGCTTaGCTTCTTCATCCCACGGGC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLDTVVA*LLHPTG
Trigger: GCCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTCCCCCTGGCACGGTaGGGTTTCCATAGTAACCAT +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLFPLAR*GFHSNH
Trigger: ATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCACATTTTGTTCTTCTaGAACACGCAGCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVHILFF*NTQLFL
Trigger: GAGAAAAAGCTGCGTGTTCAAGAAGAACAAAATGTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTAACATCAGCGTTGAATaGTTTATGTCCAGAACCTTC +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVNISVE*FMSRTF
Trigger: GAAGGTTCTGGACATAAACAATTCAACGCTGATGTT...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTCCAAGGGATCAACATaGCCACTGCAGTTGCATGGT +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLSKGST*PLQLHG
Trigger: ACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp ATGGGAATGGGAGCTGAGCTGCTTGAGTTCACAAACTGCTCTCTTCCATGCGTTCAACAAACATCAGCGTaGAATTGTTTATGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: MGMGAELLEFTNCSLPCVQQTSA*NCLCPE
Trigger: TTCTGGACATAAACAATTCAACGCTGATGTTTGTTG...AACGCATGGAAGAGAGCAGTTTGTGAACTCAAGCAGCTCAGCTCCCATTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCAAGTGGCACCAGCTTaGAATAATACGAGGTGCAGA +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLQVAPA*NNTRCR
Trigger: TCTGCACCTCGTATTATTCAAAGCTGGTGCCACTTG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCACTGTTCTCATCCACTaGTATGGTGATAACTCTCCG +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLTVLIH*YGDNSP
Trigger: CGGAGAGTTATCACCATACAAGTGGATGAGAACAGT...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCCGATCCAATAAAAGGTaGGCTTGCATTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLRSNKR*ACISMS
Trigger: AGACATGGAAATGCAAGCCAACCTTTTATTGGATCG...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCGTCTTTATCCAGCTGTaGGCCATTAACCATGATTTC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLVFIQL*AINHDF
Trigger: GAAATCATGGTTAATGGCCAACAGCTGGATAAAGAC...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS-3UTR CAA 90 bp GAGGTATCTGTTGTCCGTGTGGCTTTAGTTCAACATAAATACAGCATTTTCCTCTTTTCTGTGATTTCTTaGATGTTTGCATGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: EVSVVRVALVQHKYSIFLFSVIS*MFACSC
Trigger: GCAGCTACATGCAAACATCAAAGAAATCACAGAAAA...GAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAGATACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GGTCCAAGGACTGCACTTGTGAGCCCCTGCTCAGCCTaGGGTTCCTCACACAGCCCCGGAATGAGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: GPRTALVSPCSA*GSSHSPGMRPG
Trigger: GCCGGGCCTCATTCCGGGGCTGTGTGAGGAACCTCAGGCTGAGCAGGGGCTCACAAGTGCAGTCCTTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GTGGCCAGGTTGAGAATGGCAGGGAACAAGCCTCTCTaGTGGCTCCGCACGGTGACCCAGAGCACCGAGGCC +
Preference number: 6 (lower is better)
Translates to: VARLRMAGNKPL*WLRTVTQSTEA
Trigger: GGCCTCGGTGCTCTGGGTCACCGTGCGGAGCCAGCAGAGAGGCTTGTTCCCTGCCATTCTCAACCTGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CGGCATTGGGCGTGTCGAACAGGCCGGCCCGGCACGTaGTCCACGAGTTTGCAGAACATCTCAGGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: RHWACRTGRPGT*STSLQNISGPF
Trigger: GAAGGGGCCTGAGATGTTCTGCAAACTCGTGGAGCACGTGCCGGGCCGGCCTGTTCGACACGCCCAATGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCCCTCGCAAGGCAAAGGTGCCGGCTTGGCACTTACTaGACTGGGGGCCCACGGCATTCTCCTTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PLARQRCRLGTY*TGGPRHSPCRS
Trigger: GCTCCTGCAAGGAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCAAGCCGGCACCTTTGCCTTGCGAGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GCCAGGTTGAGAATGGCAGGGAACAAGCCTCTCTGCTaGCTCCGCACGGTGACCCAGAGCACCGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARLRMAGNKPLC*LRTVTQSTEAR
Trigger: CCTGGCCTCGGTGCTCTGGGTCACCGTGCGGAGCCAGCAGAGAGGCTTGTTCCCTGCCATTCTCAACCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TCACACTGGGCACTCGTGGAGCCCACAGCACTGCAATaGCAAGCCTGGCACCCCTGCTCCGGGTCCAGACCC +
Preference number: 6 (lower is better)
Translates to: SHWALVEPTALQ*QAWHPCSGSRP
Trigger: GGGTCTGGACCCGGAGCAGGGGTGCCAGGCTTGCAATTGCAGTGCTGTGGGCTCCACGAGTGCCCAGTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CTGCGACAGACCGAAGCAGAAGCAGGGGCTGCAGCCTaGAGGGTTGTCCCCTCGCAAGGCAAAGGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: LRQTEAEAGAAA*RVVPSQGKGAG
Trigger: GCCGGCACCTTTGCCTTGCGAGGGGACAACCCTCAAGGCTGCAGCCCCTGCTTCTGCTTCGGTCTGTCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GGTGCCAGGAGGACAGACACAGAGCTCCAACAGCAATaGCGCCTCGCCCTCAGCGGGCAGCTCGACAGCTTT +
Preference number: 6 (lower is better)
Translates to: GARRTDTELQQQ*RLALSGQLDSF
Trigger: AAAGCTGTCGAGCTGCCCGCTGAGGGCGAGGCGGCATTGCTGTTGGAGCTCTGTGTCTGTCCTCCTGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GCCAGCACATCCTCCAGTGTCTTCACCGCACTCTCGTaGGCTGCTGCCGCCAGCTCTCTGGCTTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: ASTSSSVFTALS*AAAASSLAFLP
Trigger: GGGCAGGAAAGCCAGAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGAAGACACTGGAGGATGTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CTGAGCAGGGCAGGGTGGGAGACCTTGGTCCGGCCCTaGCCGAGATCAAACATGAAGTGCAGGCGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: LSRAGWETLVRP*PRSNMKCRRPS
Trigger: AGAGGGCCGCCTGCACTTCATGTTTGATCTCGGCAAGGGCCGGACCAAGGTCTCCCACCCTGCCCTGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CATTGGGCGTGTCGAACAGGCCGGCCCGGCACGTGCTCCACGAGTTaGCAGAACATCTCAGGCCCCTTCTCTCCACAGGTAGCATTGGCG +
Preference number: 6 (lower is better)
Translates to: HWACRTGRPGTCSTS*QNISGPFSPQVALA
Trigger: CGCCAATGCTACCTGTGGAGAGAAGGGGCCTGAGATGTTCTGCAAACTCGTGGAGCACGTGCCGGGCCGGCCTGTTCGACACGCCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TTGCCATCACTGAGCAGGGCAGGGTGGGAGACCTTGGTCCGGCCCTaGCCGAGATCAAACATGAAGTGCAGGCGGCCCTCTTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPSLSRAGWETLVRP*PRSNMKCRRPSWSW
Trigger: CCAGCTCCAAGAGGGCCGCCTGCACTTCATGTTTGATCTCGGCAAGGGCCGGACCAAGGTCTCCCACCCTGCCCTGCTCAGTGATGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GAGCCCACAGCACTGCAATTGCAAGCCTGGCACCCCTaGTCCGGGTCCAGACCCCAGTATGCCTCTTCACAC +
Preference number: 6 (lower is better)
Translates to: EPTALQLQAWHP*SGSRPQYASSH
Trigger: GTGTGAAGAGGCATACTGGGGTCTGGACCCGGAGCAGGGGTGCCAGGCTTGCAATTGCAGTGCTGTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGCAGAGCTGCGACAGACCGAAGCAGAAGCAGGGGCTaGAGCCTTGAGGGTTGTCCCCTCGCAAGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: SRAATDRSRSRG*SLEGCPLARQR
Trigger: CCTTTGCCTTGCGAGGGGACAACCCTCAAGGCTGCAGCCCCTGCTTCTGCTTCGGTCTGTCGCAGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCCTGTAGCTCCTGGCTTGCAGACACACTGCCCGGATaGACGGTCACAGTCACTGTGGACAGAGCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PCSSWLADTLPG*TVTVTVDRALG
Trigger: CCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTCTGCAAGCCAGGAGCTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TCCTGCCCTGCTCTGCAGCTCAGAGGCATGCTGCTCTaGCCTGTGGACCAGGTCACGGGCTCTTCGTTTGGA +
Preference number: 6 (lower is better)
Translates to: SCPALQLRGMLL*PVDQVTGSSFG
Trigger: TCCAAACGAAGAGCCCGTGACCTGGTCCACAGGGCAGAGCAGCATGCCTCTGAGCTGCAGAGCAGGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CGCAAGGCAAAGGTGCCGGCTTGGCACTTACTGCACTaGGGGCCCACGGCATTCTCCTTGCAGGAGCAGGTA +
Preference number: 6 (lower is better)
Translates to: RKAKVPAWHLLH*GPTAFSLQEQV
Trigger: TACCTGCTCCTGCAAGGAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCAAGCCGGCACCTTTGCCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCACCGCACTCTCGTTGGCTGCTGCCGCCAGCTCTCTaGCTTTCCTGCCCTTCTCTCTCATACCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SPHSRWLLPPAL*LSCPSLSYLQG
Trigger: GCCCTGGAGGTATGAGAGAGAAGGGCAGGAAAGCCAGAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CCAGCACATCCTCCAGTGTCTTCACCGCACTCTCGTTaGCTGCTGCCGCCAGCTCTCTGGCTTTCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: PAHPPVSSPHSR*LLPPALWLSCP
Trigger: AGGGCAGGAAAGCCAGAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGAAGACACTGGAGGATGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TTGAGGGTTGTCCCCTCGCAAGGCAAAGGTGCCGGCTaGGCACTTACTGCACTGGGGGCCCACGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: LRVVPSQGKGAG*ALTALGAHGIL
Trigger: GAGAATGCCGTGGGCCCCCAGTGCAGTAAGTGCCAAGCCGGCACCTTTGCCTTGCGAGGGGACAACCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GCGCGGATGCAGTCTCTGTCTGCAGACACGGCGACTTaGATCGACGCCACTTGTTTCCGGGCCCGGCTGATC +
Preference number: 6 (lower is better)
Translates to: ARMQSLSADTAT*IDATCFRARLI
Trigger: GATCAGCCGGGCCCGGAAACAAGTGGCGTCGATCAAAGTCGCCGTGTCTGCAGACAGAGACTGCATCCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp TGCGCTGCAGACGAAGGCGAATGTACCGTGCTGAGGTaGATTCCAGCAACTGGGGTGAGGGGTCGTCAGCGC +
Preference number: 6 (lower is better)
Translates to: CAADEGECTVLR*IPATGVRGRQR
Trigger: GCGCTGACGACCCCTCACCCCAGTTGCTGGAATTCACCTCAGCACGGTACATTCGCCTTCGTCTGCAGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GGCATTCTCCTTGCAGGAGCAGGTACCACCGTCCTCTaGGCAGCTGCAGAGACCCTGTTCCAGGTCGCAGGT +
Preference number: 6 (lower is better)
Translates to: GILLAGAGTTVL*AAAETLFQVAG
Trigger: ACCTGCGACCTGGAACAGGGTCTCTGCAGCTGCTCAGAGGACGGTGGTACCTGCTCCTGCAAGGAGAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CCTGCTCAGCCTGAGGTTCCTCACACAGCCCCGGAATaGGGCCCGGCTGCTCAGGCAGTTCTGTTTGATGTG +
Preference number: 6 (lower is better)
Translates to: PAQPEVPHTAPE*GPAAQAVLFDV
Trigger: CACATCAAACAGAACTGCCTGAGCAGCCGGGCCTCATTCCGGGGCTGTGTGAGGAACCTCAGGCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GTCAAAGGCTCGGCTCAGGTCCAAGGACTGCACTTGTaGGCCCCTGCTCAGCCTGAGGTTCCTCACACAGCC +
Preference number: 6 (lower is better)
Translates to: VKGSAQVQGLHL*APAQPEVPHTA
Trigger: GGCTGTGTGAGGAACCTCAGGCTGAGCAGGGGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAGCCTTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CAGTGGAGCCCTGTAGCTCCTGGCTTGCAGACACACTaGCCGGATGCACGGTCACAGTCACTGTGGACAGAG +
Preference number: 6 (lower is better)
Translates to: QWSPVAPGLQTH*PDARSQSLWTE
Trigger: CTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTCTGCAAGCCAGGAGCTACAGGGCTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CACATCCTCCAGTGTCTTCACCGCACTCTCGTTGGCTaGTGCCGCCAGCTCTCTGGCTTTCCTGCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: HILQCLHRTLVG*CRQLSGFPALL
Trigger: GAGAAGGGCAGGAAAGCCAGAGAGCTGGCGGCAGCAGCCAACGAGAGTGCGGTGAAGACACTGGAGGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CGGCAGGCATTTCTCACAGTGGAGCCCTGTAGCTCCTaGCTTGCAGACACACTGCCCGGATGCACGGTCACA +
Preference number: 6 (lower is better)
Translates to: RQAFLTVEPCSS*LADTLPGCTVT
Trigger: TGTGACCGTGCATCCGGGCAGTGTGTCTGCAAGCCAGGAGCTACAGGGCTCCACTGTGAGAAATGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GGCTGCCGACAGTCCTGCAGTCACAGGGGATGCAATTaGGGAAACCCCGGTAGCCAAACTGGCAGCGGTCAC +
Preference number: 6 (lower is better)
Translates to: GCRQSCSHRGCN*GNPGSQTGSGH
Trigger: GTGACCGCTGCCAGTTTGGCTACCGGGGTTTCCCAAATTGCATCCCCTGTGACTGCAGGACTGTCGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp AGGGAGGCAGGCCTCACAGGAGGTCCCCGTGTAGCCTaGGGGACATTCACAGTGTTCCACATCAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: REAGLTGGPRVA*GTFTVFHISSH
Trigger: GTGGCTGCTGATGTGGAACACTGTGAATGTCCCCAAGGCTACACGGGGACCTCCTGTGAGGCCTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CCGTGTCTACTGCGCACAGTTCAGGCTGTGGTAGAGTaGGGGGCTCCGGAGGGAGTTCCCCGTGTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: PCLLRTVQAVVE*GAPEGVPRVLC
Trigger: ACAGAGAACACGGGGAACTCCCTCCGGAGCCCCCAACTCTACCACAGCCTGAACTGTGCGCAGTAGACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TGCCCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTTGGGGGTaGCAATCACACGTTTGGCAGCTACCACCTGCTGCTCGAGGGTTG +
Preference number: 6 (lower is better)
Translates to: CPDARSQSLWTEPWG*QSHVWQLPPAARGL
Trigger: CAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GACACACTGCCCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTaGGGGGTTGCAATCACACGTTTGGCAGCTACCACCTGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: DTLPGCTVTVTVDRA*GVAITRLAATTCCS
Trigger: CGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CACTCTCCAGAGGCGGGGTCACAGTTATTCTGGGTATaGGCACAGTCACAGGGTGTGCAGCCGCCATCCTGG +
Preference number: 6 (lower is better)
Translates to: HSPEAGSQLFWV*AQSQGVQPPSW
Trigger: CCAGGATGGCGGCTGCACACCCTGTGACTGTGCTCATACCCAGAATAACTGTGACCCCGCCTCTGGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp TCAAGCAGCATGATGGAAAAGAAGGGCACATGTGCCTaGGCCCCACCAGCCTCCTCCGCATCCTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSMMEKKGTCA*APPASSASLPR
Trigger: CCTGGGCAAGGATGCGGAGGAGGCTGGTGGGGCTCAGGCACATGTGCCCTTCTTTTCCATCATGCTGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GGCCAGCCTCCAAGGGATCAACATTGCCACTGCAGTTaGATGGTACACAGGTTCCCCCTGGCACGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: GQPPRDQHCHCS*MVHRFPLARLG
Trigger: ACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CACACAGCTCACAGTGGTCCCCGGATGTGTGGTCCCTaGAGCTCAGGCACTTTCCAGTTTCGGGGTCACAGA +
Preference number: 6 (lower is better)
Translates to: HTAHSGPRMCGP*SSGTFQFRGHR
Trigger: TCTGTGACCCCGAAACTGGAAAGTGCCTGAGCTGCAGGGACCACACATCCGGGGACCACTGTGAGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GGGGTTGCAATCACACGTTTGGCAGCTACCACCTGCTaGTCGAGGGTTGCCGTGATAGCCTGCAGAGCACCT +
Preference number: 6 (lower is better)
Translates to: GVAITRLAATTC*SRVAVIACRAP
Trigger: AGGTGCTCTGCAGGCTATCACGGCAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GCATCTCCACTGCGAGAAAGTCAGAACTGCTGCTGCTaGCGAGGTAGAAGAGGAGGTTGTCGGGCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: ASPLRESQNCCC*RGRRGGCRAPA
Trigger: CGCAGGAGCCCGACAACCTCCTCTTCTACCTCGGCAGCAGCAGCAGTTCTGACTTTCTCGCAGTGGAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TCCCTCAAGCAGCATGATGGAAAAGAAGGGCACATGTaGCTGAGCCCCACCAGCCTCCTCCGCATCCTTGCC +
Preference number: 6 (lower is better)
Translates to: SLKQHDGKEGHM*LSPTSLLRILA
Trigger: GGCAAGGATGCGGAGGAGGCTGGTGGGGCTCAGGCACATGTGCCCTTCTTTTCCATCATGCTGCTTGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TCCGGAGGGAGTTCCCCGTGTTCTCTGTGCAGACTCTaGATGGGCTCTTCTGCCAGCAAGCATGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SGGSSPCSLCRL*MGSSASKHVSS
Trigger: GCTGGACACATGCTTGCTGGCAGAAGAGCCCATGCAGAGTCTGCACAGAGAACACGGGGAACTCCCTCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCTTGTAGGTCAAAGGCTCGGCTCAGGTCCAAGGACTaGACTTGTGAGCCCCTGCTCAGCCTGAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: PCRSKARLRSKD*TCEPLLSLRFL
Trigger: GAGGAACCTCAGGCTGAGCAGGGGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAGCCTTTGACCTACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AGGCGAATGTACCGTGCTGAGGTGAATTCCAGCAACTaGGGTGAGGGGTCGTCAGCGCTGGGTCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: RRMYRAEVNSSN*GEGSSALGLPL
Trigger: CAATGGCAGACCCAGCGCTGACGACCCCTCACCCCAGTTGCTGGAATTCACCTCAGCACGGTACATTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCTGCGTCACGGTGGGCCGGAGCGTCTTCTCCACCATaGCGTACCCGCTTCCATCGAAATGGAAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: SASRWAGASSPP*RTRFHRNGRRN
Trigger: ATTCCTCCTTCCATTTCGATGGAAGCGGGTACGCCATGGTGGAGAAGACGCTCCGGCCCACCGTGACGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACTGTGGACAGAGCCTTGGGGGTTGCAATCACACGTTaGGCAGCTACCACCTGCTGCTCGAGGGTTGCCGTG +
Preference number: 6 (lower is better)
Translates to: TVDRALGVAITR*AATTCCSRVAV
Trigger: CACGGCAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CCCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTaGGGGGTTGCAATCACACGTTTGGCAGCTACCACC +
Preference number: 6 (lower is better)
Translates to: PGCTVTVTVDRA*GVAITRLAATT
Trigger: GGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GACGCCACTTGTTTCCGGGCCCGGCTGATCAGCAGCTaGATCTCCGACAGGTTTCTGCTCAGGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DATCFRARLISS*ISDRFLLRFSS
Trigger: GGAGGAGAACCTGAGCAGAAACCTGTCGGAGATCAAGCTGCTGATCAGCCGGGCCCGGAAACAAGTGGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TTGCCCAGGGCAACCAGGAGGATTCCGCTGCTGTTCTaGGTGGCGAATGTGGCCAGCAGGGATGACTCAGGT +
Preference number: 6 (lower is better)
Translates to: LPRATRRIPLLF*VANVASRDDSG
Trigger: ACCTGAGTCATCCCTGCTGGCCACATTCGCCACCAAGAACAGCAGCGGAATCCTCCTGGTTGCCCTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CTCAGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGTGGTTGTaGCAATTGCAGGGCACACAAGGAGCCAGCAGAGGGCGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: LRHFPVSGSQTSLWL*QLQGTQGASRGRGP
Trigger: GGGACCCCGCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GTCACAGTCACTGTGGACAGAGCCTTGGGGGTTGCAATCACACGTTaGGCAGCTACCACCTGCTGCTCGAGGGTTGCCGTGATAGCCTGC +
Preference number: 6 (lower is better)
Translates to: VTVTVDRALGVAITR*AATTCCSRVAVIAC
Trigger: GCAGGCTATCACGGCAACCCTCGAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp ATAATAGCCAGGGAGGCAGGCCTCACAGGAGGTCCCCGTGTAGCCTaGGGGACATTCACAGTGTTCCACATCAGCAGCCACTGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: IIAREAGLTGGPRVA*GTFTVFHISSHCQV
Trigger: GACTTGGCAGTGGCTGCTGATGTGGAACACTGTGAATGTCCCCAAGGCTACACGGGGACCTCCTGTGAGGCCTGCCTCCCTGGCTATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CAGCTCAGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGTGGTaGTTGCAATTGCAGGGCACACAAGGAGCCAGCAGAGGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: QLRHFPVSGSQTSLW*LQLQGTQGASRGRG
Trigger: ACCCCGCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GATGCAGTCTCTGTCTGCAGACACGGCGACTTTGATCGACGCCACTaGTTTCCGGGCCCGGCTGATCAGCAGCTTGATCTCCGACAGGTT +
Preference number: 6 (lower is better)
Translates to: DAVSVCRHGDFDRRH*FPGPADQQLDLRQV
Trigger: AACCTGTCGGAGATCAAGCTGCTGATCAGCCGGGCCCGGAAACAAGTGGCGTCGATCAAAGTCGCCGTGTCTGCAGACAGAGACTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TGGGAAGGCCTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTGGTaGCATTGCCCACCACAGTCACACTGGGGGACTCTTGGCCGTCAA +
Preference number: 6 (lower is better)
Translates to: WEGLRGTVSFPHPAW*HCPPQSHWGTLGRQ
Trigger: TTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAGGCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTCAGCTGCACCTGGAGCCTCTTCCGGACATCAGACTaGTTCAGAGGGAGCACCAAGTGGCTGTTCTGCGAG +
Preference number: 6 (lower is better)
Translates to: LSCTWSLFRTSD*FRGSTKWLFCE
Trigger: CTCGCAGAACAGCCACTTGGTGCTCCCTCTGAATCAGTCTGATGTCCGGAAGAGGCTCCAGGTGCAGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CATTCAGGCTGCCGACAGTCCTGCAGTCACAGGGGATaGAATTTGGGAAACCCCGGTAGCCAAACTGGCAGC +
Preference number: 6 (lower is better)
Translates to: HSGCRQSCSHRG*NLGNPGSQTGS
Trigger: GCTGCCAGTTTGGCTACCGGGGTTTCCCAAATTGCATCCCCTGTGACTGCAGGACTGTCGGCAGCCTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCTCCGTGCAGTTGTCAGATACAGAGCCTTCCACACTaGAGTTACAGGGCACACAGCCAAGCCCCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: PPCSCQIQSLPH*SYRAHSQAPCP
Trigger: TGGACACGGGGCTTGGCTGTGTGCCCTGTAACTGCAGTGTGGAAGGCTCTGTATCTGACAACTGCACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GCCTCTGCGTCCAGCAAGGTGTCAGGAGGCTGGAAATaGACGCCTTCGATTGTGCCCTTGAGGTTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: ASASSKVSGGWK*TPSIVPLRLLC
Trigger: ACAGAGCAACCTCAAGGGCACAATCGAAGGCGTGCATTTCCAGCCTCCTGACACCTTGCTGGACGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTTCGGGGTCACAGACATCACTGTGGTTGTTGCAATTaGAGGGCACACAAGGAGCCAGCAGAGGGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: FRGHRHHCGCCN*RAHKEPAEGGV
Trigger: GACCCCGCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CACGGTCACAGTCACTGTGGACAGAGCCTTGGGGGTTaGAATCACACGTTTGGCAGCTACCACCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: HGHSHCGQSLGG*NHTFGSYHLLL
Trigger: GAGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp ACGATGCGGTGCTTGCTTTTGTGGGCTTGGAGTGTGTaGCACTTGCCATCACAGAGAGCTCTGGCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: TMRCLLLWAWSV*HLPSQRALAAL
Trigger: CAGAGCCGCCAGAGCTCTCTGTGATGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CCGGATGCACGGTCACAGTCACTGTGGACAGAGCCTTaGGGGTTGCAATCACACGTTTGGCAGCTACCACCT +
Preference number: 6 (lower is better)
Translates to: PDARSQSLWTEP*GLQSHVWQLPP
Trigger: AGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CAGACACACTGCCCGGATGCACGGTCACAGTCACTGTaGACAGAGCCTTGGGGGTTGCAATCACACGTTTGG +
Preference number: 6 (lower is better)
Translates to: QTHCPDARSQSL*TEPWGLQSHVW
Trigger: CCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGCATCCGGGCAGTGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GGCCTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTaGTTGCATTGCCCACCACAGTCACACTGGGGGACT +
Preference number: 6 (lower is better)
Translates to: GLRGTVSFPHPA*LHCPPQSHWGT
Trigger: AGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp ATGGGATCGTTGGTGTCTGCCGAGGTGGAATGGGTGTaGGGGCTTTCAGCCCTAACGGAATTCCCGTCCACA +
Preference number: 6 (lower is better)
Translates to: MGSLVSAEVEWV*GLSALTEFPST
Trigger: TGTGGACGGGAATTCCGTTAGGGCTGAAAGCCCCCACACCCATTCCACCTCGGCAGACACCAACGATCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GCACGGTCACAGTCACTGTGGACAGAGCCTTGGGGGTaGCAATCACACGTTTGGCAGCTACCACCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ARSQSLWTEPWG*QSHVWQLPPAA
Trigger: AGCAGCAGGTGGTAGCTGCCAAACGTGTGATTGCAACCCCCAAGGCTCTGTCCACAGTGACTGTGACCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TCTGTCTGCAGACACGGCGACTTTGATCGACGCCACTaGTTTCCGGGCCCGGCTGATCAGCAGCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: SVCRHGDFDRRH*FPGPADQQLDL
Trigger: GAGATCAAGCTGCTGATCAGCCGGGCCCGGAAACAAGTGGCGTCGATCAAAGTCGCCGTGTCTGCAGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp AGAGTGAGGGGTCCTGACCCTAGGTCCACCATCACTTaGACCCTGCCACGGACCAGCTCGATGGATAGGAAG +
Preference number: 6 (lower is better)
Translates to: RVRGPDPRSTIT*TLPRTSSMDRK
Trigger: CTTCCTATCCATCGAGCTGGTCCGTGGCAGGGTCAAAGTGATGGTGGACCTAGGGTCAGGACCCCTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp ACGAGTTTGCAGAACATCTCAGGCCCCTTCTCTCCACAGGTAGCATaGGCGCTGATGTGGGCATTGGTGGCCAGGTTGAGAATGGCAGGG +
Preference number: 6 (lower is better)
Translates to: TSLQNISGPFSPQVA*ALMWALVARLRMAG
Trigger: CCCTGCCATTCTCAACCTGGCCACCAATGCCCACATCAGCGCCAATGCTACCTGTGGAGAGAAGGGGCCTGAGATGTTCTGCAAACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TCAGCGGGCAGCTCGACAGCTTTCCGGCCAACCTCCATGGAAATGTaGGCAATTCTGCTCTGCTGCAGTCCCTGGCCGTATGATGCTTTG +
Preference number: 6 (lower is better)
Translates to: SAGSSTAFRPTSMEM*AILLCCSPWPYDAL
Trigger: CAAAGCATCATACGGCCAGGGACTGCAGCAGAGCAGAATTGCCAACATTTCCATGGAGGTTGGCCGGAAAGCTGTCGAGCTGCCCGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp TCCAGCTGTGTTAGGGTGTCTTGTGCAGCAGCTGTGTaGGTCCCGGCAGCATCCACCCATTCTCTACCCTTG +
Preference number: 6 (lower is better)
Translates to: SSCVRVSCAAAV*VPAASTHSLPL
Trigger: CAAGGGTAGAGAATGGGTGGATGCTGCCGGGACTCACACAGCTGCTGCACAAGACACCCTAACACAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CCAGAACCTTCGACGGTCCAGGAGATTTGCTTGTCCTaGCCGGTGGGTTCTCGGCAGCGCTTGCTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: PEPSTVQEICLS*PVGSRQRLLPL
Trigger: TAAAGGAAGCAAGCGCTGCCGAGAACCCACCGGTCAGGACAAGCAAATCTCCTGGACCGTCGAAGGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CCCGGAATGAGGCCCGGCTGCTCAGGCAGTTCTGTTTaGTGTGGGCAGGATAGCCACCCACATAAATGGGAT +
Preference number: 6 (lower is better)
Translates to: PGMRPGCSGSSV*CGQDSHPHKWD
Trigger: ATCCCATTTATGTGGGTGGCTATCCTGCCCACATCAAACAGAACTGCCTGAGCAGCCGGGCCTCATTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TGGCTTTGTTGTGACAGTTGCATTCCTCACACTCGTTaGCGGAGGAAATGGTTCCGGGCCTCCAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: WLCCDSCIPHTR*RRKWFRASRAA
Trigger: AGCAGCCCTGGAGGCCCGGAACCATTTCCTCCGGCAACGAGTGTGAGGAATGCAACTGTCACAACAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TGCGAGCAGTTGACACAAACCCCTCCTCCACTGTACTaGCCGGCAGTGTTCAGGCTTCTCCTCTCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: CEQLTQTPPPLY*PAVFRLLLSFA
Trigger: TGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACAGTGGAGGAGGGGTTTGTGTCAACTGCTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CAGAGTCACAGTGGCCAGCCTCCAAGGGATCAACATTaGCACTGCAGTTGCATGGTACACAGGTTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: QSHSGQPPRDQH*HCSCMVHRFPL
Trigger: CAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGTGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CGGAATTCCCGTCCACAGTCAGGACGATGCGGTGCTTaGTTTTGTGGGCTTGGAGTGTGTGCCACTTGCCAT +
Preference number: 6 (lower is better)
Translates to: RNSRPQSGRCGA*FCGLGVCATCH
Trigger: ATGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGGATAGCCACCCACATAAATGGGATCGTTGGTGTCTaGCGAGGTGGAATGGGTGTGGGGGCTTTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RIATHINGIVGV*RGGMGVGAFSP
Trigger: AGGGCTGAAAGCCCCCACACCCATTCCACCTCGGCAGACACCAACGATCCCATTTATGTGGGTGGCTATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GTAGTTGCTTTGCTTCTTCATCCCACGGGCAGCTGCTaGCATGGCCGTAGCAAATGCACATGCCTCCAACGG +
Preference number: 6 (lower is better)
Translates to: VVALLLHPTGSC*HGRSKCTCLQR
Trigger: CCGTTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AGCCTCCAAGGGATCAACATTGCCACTGCAGTTGCATaGTACACAGGTTCCCCCTGGCACGGTTGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: SLQGINIATAVA*YTGSPWHGWVS
Trigger: GGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCCAGATGGCAGATGCCAGAAAGGGAGCCATTCTCGTaGCAGTCACAGGCTCGGCAGTTTTTGGCAGTCACG +
Preference number: 6 (lower is better)
Translates to: SRWQMPEREPFS*QSQARQFLAVT
Trigger: CGTGACTGCCAAAAACTGCCGAGCCTGTGACTGCCACGAGAATGGCTCCCTTTCTGGCATCTGCCATCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCCATCAGGATGTGTCTCGGCAGGCATTTCTCACAGTaGAGCCCTGTAGCTCCTGGCTTGCAGACACACTGC +
Preference number: 6 (lower is better)
Translates to: SIRMCLGRHFSQ*SPVAPGLQTHC
Trigger: GCAGTGTGTCTGCAAGCCAGGAGCTACAGGGCTCCACTGTGAGAAATGCCTGCCGAGACACATCCTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp ATGTGGCCAGCAGGGATGACTCAGGTGAGAGAGACTTaGGTGGCATCTCCACATAGCCGCCTCTCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: MWPAGMTQVRET*VASPHSRLSGN
Trigger: GTTTCCTGAGAGGCGGCTATGTGGAGATGCCACCCAAGTCTCTCTCACCTGAGTCATCCCTGCTGGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GAGGGAGTTCCCCGTGTTCTCTGTGCAGACTCTGCATaGGCTCTTCTGCCAGCAAGCATGTGTCCAGCTCTA +
Preference number: 6 (lower is better)
Translates to: EGVPRVLCADSA*ALLPASMCPAL
Trigger: TAGAGCTGGACACATGCTTGCTGGCAGAAGAGCCCATGCAGAGTCTGCACAGAGAACACGGGGAACTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TGTGGGCAGGATAGCCACCCACATAAATGGGATCGTTaGTGTCTGCCGAGGTGGAATGGGTGTGGGGGCTTT +
Preference number: 6 (lower is better)
Translates to: CGQDSHPHKWDR*CLPRWNGCGGF
Trigger: AAAGCCCCCACACCCATTCCACCTCGGCAGACACCAACGATCCCATTTATGTGGGTGGCTATCCTGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CAGAACATCTCAGGCCCCTTCTCTCCACAGGTAGCATaGGCGCTGATGTGGGCATTGGTGGCCAGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: QNISGPFSPQVA*ALMWALVARLR
Trigger: TCTCAACCTGGCCACCAATGCCCACATCAGCGCCAATGCTACCTGTGGAGAGAAGGGGCCTGAGATGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CTGAGGTCCCGATGGCTAAGGGTCATGAGGTCTGCGTaGAGTGTTCTGATGCGCTGCAGACGAAGGCGAATG +
Preference number: 6 (lower is better)
Translates to: LRSRWLRVMRSA*SVLMRCRRRRM
Trigger: CATTCGCCTTCGTCTGCAGCGCATCAGAACACTCAACGCAGACCTCATGACCCTTAGCCATCGGGACCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TCAGGAGGCTGGAAATGCACGCCTTCGATTGTGCCCTaGAGGTTGCTCTGTGAAACCACATGCAGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SGGWKCTPSIVP*RLLCETTCRRG
Trigger: GCCCCTCCTGCATGTGGTTTCACAGAGCAACCTCAAGGGCACAATCGAAGGCGTGCATTTCCAGCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TTCCCGTCCACAGTCAGGACGATGCGGTGCTTGCTTTaGTGGGCTTGGAGTGTGTGCCACTTGCCATCACAG +
Preference number: 6 (lower is better)
Translates to: FPSTVRTMRCLL*WAWSVCHLPSQ
Trigger: CTGTGATGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACGGAATTCCCGTCCACAGTCAGGACGATGCGGTGCTaGCTTTTGTGGGCTTGGAGTGTGTGCCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: TEFPSTVRTMRC*LLWAWSVCHLP
Trigger: TGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAATTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TCAAGGTCTCTGAGGTCCCGATGGCTAAGGGTCATGAGGTCTGCGTaGAGTGTTCTGATGCGCTGCAGACGAAGGCGAATGTACCGTGCT +
Preference number: 6 (lower is better)
Translates to: SRSLRSRWLRVMRSA*SVLMRCRRRRMYRA
Trigger: AGCACGGTACATTCGCCTTCGTCTGCAGCGCATCAGAACACTCAACGCAGACCTCATGACCCTTAGCCATCGGGACCTCAGAGACCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CCTCATTCAGGCTGCCGACAGTCCTGCAGTCACAGGGGATGCAATTaGGGAAACCCCGGTAGCCAAACTGGCAGCGGTCACATTTATCTC +
Preference number: 6 (lower is better)
Translates to: PHSGCRQSCSHRGCN*GNPGSQTGSGHIYL
Trigger: GAGATAAATGTGACCGCTGCCAGTTTGGCTACCGGGGTTTCCCAAATTGCATCCCCTGTGACTGCAGGACTGTCGGCAGCCTGAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GAGGCATGCTGCTCTGCCCTGTGGACCAGGTCACGGGCTCTTCGTTaGGACATCTGCATGACGAGGTCATCTACGTGGCTCCTGATTTTT +
Preference number: 6 (lower is better)
Translates to: EACCSALWTRSRALR*DICMTRSSTWLLIF
Trigger: AAAAATCAGGAGCCACGTAGATGACCTCGTCATGCAGATGTCCAAACGAAGAGCCCGTGACCTGGTCCACAGGGCAGAGCAGCATGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp ACTTTGATCGACGCCACTTGTTTCCGGGCCCGGCTGATCAGCAGCTaGATCTCCGACAGGTTTCTGCTCAGGTTCTCCTCCAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: TLIDATCFRARLISS*ISDRFLLRFSSRVF
Trigger: GAAAACCCTGGAGGAGAACCTGAGCAGAAACCTGTCGGAGATCAAGCTGCTGATCAGCCGGGCCCGGAAACAAGTGGCGTCGATCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TCTGTCATAAGAGTGAGGGGTCCTGACCCTAGGTCCACCATCACTTaGACCCTGCCACGGACCAGCTCGATGGATAGGAAGTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SVIRVRGPDPRSTIT*TLPRTSSMDRKSLV
Trigger: CACCAAGGACTTCCTATCCATCGAGCTGGTCCGTGGCAGGGTCAAAGTGATGGTGGACCTAGGGTCAGGACCCCTCACTCTTATGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GAAGTGCAGGCGGCCCTCTTGGAGCTGGAGCGTGGCGTAGTCCATTaGGTTCTGATGAGCCACATAGTAAATGAGGCCACTGGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: EVQAALLELERGVVH*VLMSHIVNEATGGK
Trigger: TTTGCCTCCAGTGGCCTCATTTACTATGTGGCTCATCAGAACCAAATGGACTACGCCACGCTCCAGCTCCAAGAGGGCCGCCTGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TCAGCCCTAACGGAATTCCCGTCCACAGTCAGGACGATGCGGTGCTaGCTTTTGTGGGCTTGGAGTGTGTGCCACTTGCCATCACAGAGA +
Preference number: 6 (lower is better)
Translates to: SALTEFPSTVRTMRC*LLWAWSVCHLPSQR
Trigger: TCTCTGTGATGGCAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAATTCCGTTAGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TGCTGTCAGCTTGTTTCCGAGGTAGGCCTCAGGAGCTaGCCAGTAGTAAGTGGAAGTCAGCCTCTGCATGAC +
Preference number: 6 (lower is better)
Translates to: CCQLVSEVGLRS*PVVSGSQPLHD
Trigger: GTCATGCAGAGGCTGACTTCCACTTACTACTGGGCAGCTCCTGAGGCCTACCTCGGAAACAAGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTCCAGTTTCGGGGTCACAGACATCACTGTGGTTGTTaGAATTGCAGGGCACACAAGGAGCCAGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: FQFRGHRHHCGC*NCRAHKEPAEG
Trigger: GCCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CACAGTACTGTCCTTCATAGCCGGGGAGGCAGGCATTaGACCGGAAATCACTGTCACCTTCCACGACACAAG +
Preference number: 6 (lower is better)
Translates to: HSTVLHSRGGRH*TGNHCHLPRHK
Trigger: CTTGTGTCGTGGAAGGTGACAGTGATTTCCGGTGCAATGCCTGCCTCCCCGGCTATGAAGGACAGTACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCAGCATCTCAGCTTCCTCTGTCAGTGTCTGGATGTTaGTGTGGACGTGTGCCGCACTGGTGGCATTCAAAG +
Preference number: 6 (lower is better)
Translates to: PASQLPLSVSGC*CGRVPHWWHSK
Trigger: CTTTGAATGCCACCAGTGCGGCACACGTCCACAGCAACATCCAGACACTGACAGAGGAAGCTGAGATGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGTCTGAGGCTGATAGGCGCGGATGCAGTCTCTGTCTaGAGACACGGCGACTTTGATCGACGCCACTTGTTT +
Preference number: 6 (lower is better)
Translates to: SLRLIGADAVSV*RHGDFDRRHLF
Trigger: AAACAAGTGGCGTCGATCAAAGTCGCCGTGTCTGCAGACAGAGACTGCATCCGCGCCTATCAGCCTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCCGTGTTCTCTGTGCAGACTCTGCATGGGCTCTTCTaGCAGCAAGCATGTGTCCAGCTCTACTTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: PVFSVQTLHGLF*QQACVQLYLLR
Trigger: TCTGAGCAAGTAGAGCTGGACACATGCTTGCTGGCAGAAGAGCCCATGCAGAGTCTGCACAGAGAACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TCCGAGGTACAGTTTCCTTTCCACATCCAGCGTGGTTaGATTGCCCACCACAGTCACACTGGGGGACTCTTG +
Preference number: 6 (lower is better)
Translates to: SEVQFPFHIQRG*IAHHSHTGGLL
Trigger: CAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CTAACGGAATTCCCGTCCACAGTCAGGACGATGCGGTaGTTGCTTTTGTGGGCTTGGAGTGTGTGCCACTTG +
Preference number: 6 (lower is better)
Translates to: LTEFPSTVRTMR*LLLWAWSVCHL
Trigger: CAAGTGGCACACACTCCAAGCCCACAAAAGCAAGCACCGCATCGTCCTGACTGTGGACGGGAATTCCGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AAGCACTTCAGGCATTCCCCTGTGACAGAGTCACAGTaGCCAGCCTCCAAGGGATCAACATTGCCACTGCAG +
Preference number: 6 (lower is better)
Translates to: KHFRHSPVTESQ*PASKGSTLPLQ
Trigger: CTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGTGACTCTGTCACAGGGGAATGCCTGAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AGCCATTCTCGTGGCAGTCACAGGCTCGGCAGTTTTTaGCAGTCACGGCATCTCCATAGAAGCCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: SHSRGSHRLGSF*QSRHLHRSHLH
Trigger: GTGCAGATGGCTTCTATGGAGATGCCGTGACTGCCAAAAACTGCCGAGCCTGTGACTGCCACGAGAATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TTTTTGCAGGGGCAGTGGCCAGAGAGAACATCACACTaGGCACTCGTGGAGCCCACAGCACTGCAATTGCAA +
Preference number: 6 (lower is better)
Translates to: FLQGQWPERTSH*ALVEPTALQLQ
Trigger: TTGCAATTGCAGTGCTGTGGGCTCCACGAGTGCCCAGTGTGATGTTCTCTCTGGCCACTGCCCCTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CCCTGCCACGGACCAGCTCGATGGATAGGAAGTCCTTaGTGCCGTTTGAAGCCAGGTAGAAAAGAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: PCHGPARWIGSP*CRLKPGRKEGH
Trigger: ATGGCCTTCTTTTCTACCTGGCTTCAAACGGCACCAAGGACTTCCTATCCATCGAGCTGGTCCGTGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GTCTTTCTCCAGCCGATTGAGGTCGGAAGCGGCTCCTaGAGTCTCTCCTTGCTTTGTCTCCTTGTCACTGGT +
Preference number: 6 (lower is better)
Translates to: VFLQPIEVGSGS*SLSLLCLLVTG
Trigger: ACCAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGACCTCAATCGGCTGGAGAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACAGAGTCACAGTGGCCAGCCTCCAAGGGATCAACATaGCCACTGCAGTTGCATGGTACACAGGTTCCCCCT +
Preference number: 6 (lower is better)
Translates to: TESQWPASKGST*PLQLHGTQVPP
Trigger: AGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATGTTGATCCCTTGGAGGCTGGCCACTGTGACTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GGGCTCTTCTGCCAGCAAGCATGTGTCCAGCTCTACTaGCTCAGAGCCAGTCGCATGGGTGAAGTCCAAAAG +
Preference number: 6 (lower is better)
Translates to: GLFCQQACVQLY*LRASRMGEVQK
Trigger: CTTTTGGACTTCACCCATGCGACTGGCTCTGAGCAAGTAGAGCTGGACACATGCTTGCTGGCAGAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CTCCGAGGTACAGTTTCCTTTCCACATCCAGCGTGGTaGCATTGCCCACCACAGTCACACTGGGGGACTCTT +
Preference number: 6 (lower is better)
Translates to: LRGTVSFPHPAW*HCPPQSHWGTL
Trigger: AAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGATGTGGAAAGGAAACTGTACCTCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CGCCGTGTTGTTGATGCTGATCTGACGGTGCCCACCCAGGACATCTaGCTGGGACCGGATCTTATTTGTGCTCATCAAGTCAGTGACCAG +
Preference number: 6 (lower is better)
Translates to: RRVVDADLTVPTQDI*LGPDLICAHQVSDQ
Trigger: CTGGTCACTGACTTGATGAGCACAAATAAGATCCGGTCCCAGCAAGATGTCCTGGGTGGGCACCGTCAGATCAGCATCAACAACACGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp ATACACCCATGGAACGAAGTCCGCATCTTGAGCATCGGGGTCGCCTaGTCCTCCGGAAGTCCCCCTATGTACAGGTTGGATATGTCGATC +
Preference number: 6 (lower is better)
Translates to: IHPWNEVRILSIGVA*SSGSPPMYRLDMSI
Trigger: GATCGACATATCCAACCTGTACATAGGGGGACTTCCGGAGGACAAGGCGACCCCGATGCTCAAGATGCGGACTTCGTTCCATGGGTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CCTGTCCACAGCAGAGGCAGACAAGGGCCTGTCTTTATCCAGCTGTaGGCCATTAACCATGATTTCCCCAATGCAGGCAGGGATGCTGTG +
Preference number: 6 (lower is better)
Translates to: PVHSRGRQGPVFIQL*AINHDFPNAGRDAV
Trigger: CACAGCATCCCTGCCTGCATTGGGGAAATCATGGTTAATGGCCAACAGCTGGATAAAGACAGGCCCTTGTCTGCCTCTGCTGTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CCCGTGGTGTTGTGTGTACACACAGAGCAAATTCCATaGATGTCACACTCGGATGCATGCCCGTGGCACTCG +
Preference number: 6 (lower is better)
Translates to: PVVLCVHTEQIP*MSHSDACPWHS
Trigger: CGAGTGCCACGGGCATGCATCCGAGTGTGACATTCATGGAATTTGCTCTGTGTGTACACACAACACCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp AGTCCCAGCAGAGACGAAATGTTCTGGTGCATGCTCTaGAGGGCAGACACGGGTGGCTGGAAATCTTTACGC +
Preference number: 6 (lower is better)
Translates to: SPSRDEMFWCML*RADTGGWKSLR
Trigger: GCGTAAAGATTTCCAGCCACCCGTGTCTGCCCTTCAGAGCATGCACCAGAACATTTCGTCTCTGCTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTCCTGGACTGTGGCATTCACTCTGGACAGGTCCTCTaGTGTATTGAAGACCCTCAGGCTCAAAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: LLDCGIHSGQVL*CIEDPQAQSQH
Trigger: GTGCTGGCTTTGAGCCTGAGGGTCTTCAATACATCAGAGGACCTGTCCAGAGTGAATGCCACAGTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CCAGGTAGAAAAGAAGGCCATTCGGGGAGAAGGTGCTaGAGAGAATTACTATCTGCGTCACGGTGGGCCGGA +
Preference number: 6 (lower is better)
Translates to: PGRKEGHSGRRC*RELLSASRWAG
Trigger: TCCGGCCCACCGTGACGCAGATAGTAATTCTCTTCAGCACCTTCTCCCCGAATGGCCTTCTTTTCTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGGGTCATGAGGTCTGCGTTGAGTGTTCTGATGCGCTaGAGACGAAGGCGAATGTACCGTGCTGAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: RVMRSALSVLMR*RRRRMYRAEVN
Trigger: ATTCACCTCAGCACGGTACATTCGCCTTCGTCTGCAGCGCATCAGAACACTCAACGCAGACCTCATGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp ACTGTAGTTGCTTTGCTTCTTCATCCCACGGGCAGCTaGTGGCATGGCCGTAGCAAATGCACATGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: TVVALLLHPTGS*WHGRSKCTCLQ
Trigger: TTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGACACCTGGTCCACAGTGACACTGTCCTTCCTCCGTaGAGTTGTCAGATACAGAGCCTTCCACACTGCAGT +
Preference number: 6 (lower is better)
Translates to: RHLVHSDTVLPP*SCQIQSLPHCS
Trigger: ACTGCAGTGTGGAAGGCTCTGTATCTGACAACTGCACGGAGGAAGGACAGTGTCACTGTGGACCAGGTGTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTTGCTTGTCCTGACCGGTGGGTTCTCGGCAGCGCTTaGTTCCTTTACACTCAGGGACCCCATGTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: FACPDRWVLGSA*FLYTQGPHVSK
Trigger: TTTGGAAACATGGGGTCCCTGAGTGTAAAGGAAGCAAGCGCTGCCGAGAACCCACCGGTCAGGACAAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TGCCACGGACCAGCTCGATGGATAGGAAGTCCTTGGTaGCGTTTGAAGCCAGGTAGAAAAGAAGGCCATTCG +
Preference number: 6 (lower is better)
Translates to: CHGPARWIGSPW*RLKPGRKEGHS
Trigger: CGAATGGCCTTCTTTTCTACCTGGCTTCAAACGGCACCAAGGACTTCCTATCCATCGAGCTGGTCCGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CGATTGAGGTCGGAAGCGGCTCCTGGAGTCTCTCCTTaGTTTGTCTCCTTGTCACTGGTGTCATATGCATCG +
Preference number: 6 (lower is better)
Translates to: RLRSEAAPGVSP*FVSLSLVSYAS
Trigger: CGATGCATATGACACCAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGACCTCAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GGCTCTTCTGCCAGCAAGCATGTGTCCAGCTCTACTTaGTCAGAGCCAGTCGCATGGGTGAAGTCCAAAAGT +
Preference number: 6 (lower is better)
Translates to: GSSASKHVSSST*SEPVAWVKSKS
Trigger: ACTTTTGGACTTCACCCATGCGACTGGCTCTGAGCAAGTAGAGCTGGACACATGCTTGCTGGCAGAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CACTTCGTAATCCTGTCTCACTCCATTCTCAGGCGCTaGGGCATCCATATAAATGACGTGCTTCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: HFVILSHSILRR*GIHINDVLPGP
Trigger: CGGGCCAGGAAGCACGTCATTTATATGGATGCCCCAGCGCCTGAGAATGGAGTGAGACAGGATTACGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AGGCACTTTCCAGTTTCGGGGTCACAGACATCACTGTaGTTGTTGCAATTGCAGGGCACACAAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RHFPVSGSQTSL*LLQLQGTQGAS
Trigger: GCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AATGTTCTGGTGCATGCTCTGAAGGGCAGACACGGGTaGCTGGAAATCTTTACGCGCCGTCTGGTTCAACGT +
Preference number: 6 (lower is better)
Translates to: NVLVHALKGRHG*LEIFTRRLVQR
Trigger: ACGTTGAACCAGACGGCGCGTAAAGATTTCCAGCCACCCGTGTCTGCCCTTCAGAGCATGCACCAGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GTTTCACAGTTGATCCCTGTGGTATTCTGCGAGCAGTaGACACAAACCCCTCCTCCACTGTACTGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: VSQLIPVVFCEQ*TQTPPPLYCPA
Trigger: TGCCGGGCAGTACAGTGGAGGAGGGGTTTGTGTCAACTGCTCGCAGAATACCACAGGGATCAACTGTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TCCTCTCCATCAGTGAGGTGGCAGGTAGGGCTGAAATaGTTAGAGTCAATGGAGAGAGGGCAGGCACAAGGC +
Preference number: 6 (lower is better)
Translates to: SSPSVRWQVGLK*LESMERGQAQG
Trigger: GCCTTGTGCCTGCCCTCTCTCCATTGACTCTAACAATTTCAGCCCTACCTGCCACCTCACTGATGGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TTTCCAGTTTCGGGGTCACAGACATCACTGTGGTTGTaGCAATTGCAGGGCACACAAGGAGCCAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: FPVSGSQTSLWL*QLQGTQGASRG
Trigger: CCCTCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CGCAGCTTTTTCTCCTGGAATTCTTTCAGGTTGGCCTaGACAAGGAGCAGCAGGAGGTTGCTCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RSFFSWNSFRLA*TRSSRRLLSWV
Trigger: GACCCAGGAGAGCAACCTCCTGCTGCTCCTTGTCAAGGCCAACCTGAAAGAATTCCAGGAGAAAAAGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GGACCAGCTCGATGGATAGGAAGTCCTTGGTGCCGTTaGAAGCCAGGTAGAAAAGAAGGCCATTCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: GPARWIGSPWCR*KPGRKEGHSGR
Trigger: TCTCCCCGAATGGCCTTCTTTTCTACCTGGCTTCAAACGGCACCAAGGACTTCCTATCCATCGAGCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CCGATTGAGGTCGGAAGCGGCTCCTGGAGTCTCTCCTaGCTTTGTCTCCTTGTCACTGGTGTCATATGCATC +
Preference number: 6 (lower is better)
Translates to: PIEVGSGSWSLS*LCLLVTGVICI
Trigger: GATGCATATGACACCAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGACCTCAATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACGTTTTTAATACACCCATGGAACGAAGTCCGCATCTaGAGCATCGGGGTCGCCTTGTCCTCCGGAAGTCCC +
Preference number: 6 (lower is better)
Translates to: TFLIHPWNEVRI*SIGVALSSGSP
Trigger: GGGACTTCCGGAGGACAAGGCGACCCCGATGCTCAAGATGCGGACTTCGTTCCATGGGTGTATTAAAAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TCGATACAGGTTTCACAGTTGATCCCTGTGGTATTCTGCGAGCAGTaGACACAAACCCCTCCTCCACTGTACTGCCCGGCAGTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: SIQVSQLIPVVFCEQ*TQTPPPLYCPAVFR
Trigger: CCTGAACACTGCCGGGCAGTACAGTGGAGGAGGGGTTTGTGTCAACTGCTCGCAGAATACCACAGGGATCAACTGTGAAACCTGTATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CATTGCCACTGCAGTTGCATGGTACACAGGTTCCCCCTGGCACGGTaGGGTTTCCATAGTAACCATCTGCACATCTCTCACACCAGGATC +
Preference number: 6 (lower is better)
Translates to: HCHCSCMVHRFPLAR*GFHSNHLHISHTRI
Trigger: GATCCTGGTGTGAGAGATGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GGAGTTTCCCACCATAAGCCAAGAGCTGGTCTCCCTGGAACTGCTTaGGTAGCCGCCAGTAAAATGGCTCTGCATAGATATGCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: GVSHHKPRAGLPGTA*VAASKMALHRYAGG
Trigger: TCCGCCAGCATATCTATGCAGAGCCATTTTACTGGCGGCTACCAAAGCAGTTCCAGGGAGACCAGCTCTTGGCTTATGGTGGGAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CCTTGCTTCCGGTTCCGCTGGAAGGCGATTTTATACCAGGTTCCGTaGTTATACCGCCTGTCTGTCATAAGAGTGAGGGGTCCTGACCCT +
Preference number: 6 (lower is better)
Translates to: PCFRFRWKAILYQVP*LYRLSVIRVRGPDP
Trigger: AGGGTCAGGACCCCTCACTCTTATGACAGACAGGCGGTATAACAACGGAACCTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TTTCTCCAGCCGATTGAGGTCGGAAGCGGCTCCTGGAGTCTCTCCTaGCTTTGTCTCCTTGTCACTGGTGTCATATGCATCGAAGACAGC +
Preference number: 6 (lower is better)
Translates to: FLQPIEVGSGSWSLS*LCLLVTGVICIEDS
Trigger: GCTGTCTTCGATGCATATGACACCAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTCCGACCTCAATCGGCTGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GCTCTGCCACCAGTTGTTGGTGCCATCGATTGCGTGTaGTATCGGATGGCGCTCTCTAGGATTCGTACTGTT +
Preference number: 6 (lower is better)
Translates to: ALPPVVGAIDCV*YRMALSRIRTV
Trigger: AACAGTACGAATCCTAGAGAGCGCCATCCGATATCACACGCAATCGATGGCACCAACAACTGGTGGCAGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTGTCGCAGCTCTCGCCACACGTATTGTGTTCACACTaGCACTGTAGTTGCTTTGCTTCTTCATCCCACGGG +
Preference number: 6 (lower is better)
Translates to: LSQLSPHVLCSH*HCSCFASSSHG
Trigger: CCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTCAGTGTGAACACAATACGTGTGGCGAGAGCTGCGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp AAGTCAGTGACCAGCCACCCTGACATATTGGTCACCTaGCTAATGGACCACGTGAGGCTGTCACAGACACCA +
Preference number: 6 (lower is better)
Translates to: KSVTSHPDILVT*LMDHVRLSQTP
Trigger: TGGTGTCTGTGACAGCCTCACGTGGTCCATTAGTCAGGTGACCAATATGTCAGGGTGGCTGGTCACTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp ATGGTGAGCCCATTCCCCTTGATGATGATGTCAGCATaGGACATGAGGTCACTGTCCACCGTCTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: MVSPFPLMMMSA*DMRSLSTVSTG
Trigger: TCCAGTGGAGACGGTGGACAGTGACCTCATGTCTCATGCTGACATCATCATCAAGGGGAATGGGCTCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTGTCACACTGTTTCCCAGAGACACCTGGTCCACAGTaGCACTGTCCTTCCTCCGTGCAGTTGTCAGATACA +
Preference number: 6 (lower is better)
Translates to: LSHCFPETPGPQ*HCPSSVQLSDT
Trigger: TGTATCTGACAACTGCACGGAGGAAGGACAGTGTCACTGTGGACCAGGTGTCTCTGGGAAACAGTGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTGTGGCATTCACTCTGGACAGGTCCTCTGATGTATTaGAGACCCTCAGGCTCAAAGCCAGCACATCCTCCA +
Preference number: 6 (lower is better)
Translates to: LWHSLWTGPLMY*RPSGSKPAHPP
Trigger: TGGAGGATGTGCTGGCTTTGAGCCTGAGGGTCTTCAATACATCAGAGGACCTGTCCAGAGTGAATGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CATCCCACGGGCAGCTGCTGGCATGGCCGTAGCAAATaGACATGCCTCCAACGGAAATGTCTTTTATCGAAT +
Preference number: 6 (lower is better)
Translates to: HPTGSCWHGRSK*TCLQRKCLLSN
Trigger: ATTCGATAAAAGACATTTCCGTTGGAGGCATGTGCATTTGCTACGGCCATGCCAGCAGCTGCCCGTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GTTTTTGGCAGTCACGGCATCTCCATAGAAGCCATCTaGACACCTCTCACAATGGGCACCGTCTGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: VFGSHGISIEAI*TPLTMGTVCVP
Trigger: TGGAACACAGACGGTGCCCATTGTGAGAGGTGTGCAGATGGCTTCTATGGAGATGCCGTGACTGCCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CACAGTTATTCTGGGTATGAGCACAGTCACAGGGTGTaGAGCCGCCATCCTGGAATGCATAGAAACCGTGTG +
Preference number: 6 (lower is better)
Translates to: HSYSGYEHSHRV*SRHPGMHRNRV
Trigger: CACACGGTTTCTATGCATTCCAGGATGGCGGCTGCACACCCTGTGACTGTGCTCATACCCAGAATAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GGACAGTCATCAGCTGGTCACGGTCAATCTCCCTTCTaGTATCAAAGTCCCGGAAGTTCTCAGGCACAAGTC +
Preference number: 6 (lower is better)
Translates to: GQSSAGHGQSPF*YQSPGSSQAQV
Trigger: GACTTGTGCCTGAGAACTTCCGGGACTTTGATACCAGAAGGGAGATTGACCGTGACCAGCTGATGACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GCAGTTGCATGGTACACAGGTTCCCCCTGGCACGGTTaGGTTTCCATAGTAACCATCTGCACATCTCTCACA +
Preference number: 6 (lower is better)
Translates to: AVAWYTGSPWHG*VSIVTICTSLT
Trigger: TGTGAGAGATGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp ATTGCCACTGCAGTTGCATGGTACACAGGTTCCCCCTaGCACGGTTGGGTTTCCATAGTAACCATCTGCACA +
Preference number: 6 (lower is better)
Translates to: IATAVAWYTGSP*HGWVSIVTICT
Trigger: TGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCAGTGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TTAAGGAGCTCCTCAGCAGCCTGCAGTTTTTCACTGTaGTTGGAAAGGAGGCTGTTGGCCTCCTTCAATGCC +
Preference number: 6 (lower is better)
Translates to: LRSSSAACSFSL*LERRLLASFNA
Trigger: GGCATTGAAGGAGGCCAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCAGGCTGCTGAGGAGCTCCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GTCTTCTCCACCATGGCGTACCCGCTTCCATCGAAATaGAAGGAGGAATCTTCGTTCTGGGAGCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: VFSTMAYPLPSK*KEESSFWELPK
Trigger: CTTTGGAAGCTCCCAGAACGAAGATTCCTCCTTCCATTTCGATGGAAGCGGGTACGCCATGGTGGAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GTTGCATTGCCCACCACAGTCACACTGGGGGACTCTTaGCCGTCAACAGTCATGAACGCCTTCCTTTTAATG +
Preference number: 6 (lower is better)
Translates to: VALPTTVTLGDS*PSTVMNAFLLM
Trigger: CATTAAAAGGAAGGCGTTCATGACTGTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CACACGTATTGTGTTCACACTGACACTGTAGTTGCTTaGCTTCTTCATCCCACGGGCAGCTGCTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: HTYCVHTDTVVA*LLHPTGSCWHG
Trigger: GCCATGCCAGCAGCTGCCCGTGGGATGAAGAAGCAAAGCAACTACAGTGTCAGTGTGAACACAATACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GTTGATGCTGATCTGACGGTGCCCACCCAGGACATCTaGCTGGGACCGGATCTTATTTGTGCTCATCAAGTC +
Preference number: 6 (lower is better)
Translates to: VDADLTVPTQDI*LGPDLICAHQV
Trigger: GACTTGATGAGCACAAATAAGATCCGGTCCCAGCAAGATGTCCTGGGTGGGCACCGTCAGATCAGCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TGCAGTTGCATGGTACACAGGTTCCCCCTGGCACGGTaGGGTTTCCATAGTAACCATCTGCACATCTCTCAC +
Preference number: 6 (lower is better)
Translates to: CSCMVHRFPLAR*GFHSNHLHISH
Trigger: GTGAGAGATGTGCAGATGGTTACTATGGAAACCCAACCGTGCCAGGGGGAACCTGTGTACCATGCAACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CACTTTCCAGTTTCGGGGTCACAGACATCACTGTGGTaGTTGCAATTGCAGGGCACACAAGGAGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: HFPVSGSQTSLW*LQLQGTQGASR
Trigger: TCTGCTGGCTCCTTGTGTGCCCTGCAATTGCAACAACCACAGTGATGTCTGTGACCCCGAAACTGGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GAAGCGGCTCCTGGAGTCTCTCCTTGCTTTGTCTCCTaGTCACTGGTGTCATATGCATCGAAGACAGCTAGC +
Preference number: 6 (lower is better)
Translates to: EAAPGVSPCFVS*SLVSYASKTAS
Trigger: GCTAGCTGTCTTCGATGCATATGACACCAGTGACAAGGAGACAAAGCAAGGAGAGACTCCAGGAGCCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GGTTGCATTGCCCACCACAGTCACACTGGGGGACTCTaGGCCGTCAACAGTCATGAACGCCTTCCTTTTAAT +
Preference number: 6 (lower is better)
Translates to: GCIAHHSHTGGL*AVNSHERLPFN
Trigger: ATTAAAAGGAAGGCGTTCATGACTGTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp AGCGTTGAATTGTTTATGTCCAGAACCTTCGACGGTCCAGGAGATTaGCTTGTCCTGACCGGTGGGTTCTCGGCAGCGCTTGCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SVELFMSRTFDGPGD*LVLTGGFSAALASF
Trigger: AAAGGAAGCAAGCGCTGCCGAGAACCCACCGGTCAGGACAAGCAAATCTCCTGGACCGTCGAAGGTTCTGGACATAAACAATTCAACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp TGGCCGTCAACAGTCATGAACGCCTTCCTTTTAATGTATTCTGTCTaGACTGTGTGCCACTTGCCATCACTGAGCAGGGCAGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: WPSTVMNAFLLMYSV*TVCHLPSLSRAGWE
Trigger: CTCCCACCCTGCCCTGCTCAGTGATGGCAAGTGGCACACAGTCAAGACAGAATACATTAAAAGGAAGGCGTTCATGACTGTTGACGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GCTTCCTTAAGGAGCTCCTCAGCAGCCTGCAGTTTTTCACTGTGGTaGGAAAGGAGGCTGTTGGCCTCCTTCAATGCCTTCAACTTTTCC +
Preference number: 6 (lower is better)
Translates to: ASLRSSSAACSFSLW*ERRLLASFNAFNFS
Trigger: GGAAAAGTTGAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCAGGCTGCTGAGGAGCTCCTTAAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp ATCCAGCGTGGTTGCATTGCCCACCACAGTCACACTGGGGGACTCTaGGCCGTCAACAGTCATGAACGCCTTCCTTTTAATGTATTCTGT +
Preference number: 6 (lower is better)
Translates to: IQRGCIAHHSHTGGL*AVNSHERLPFNVFC
Trigger: ACAGAATACATTAAAAGGAAGGCGTTCATGACTGTTGACGGCCAAGAGTCCCCCAGTGTGACTGTGGTGGGCAATGCAACCACGCTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CAAGTGGCACCAGCTTTGAATAATACGAGGTGCAGATaGCTTCGTTGTCTGCTCTGTAAGTGGGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: QVAPALNNTRCR*LRCLLCKWEVP
Trigger: GGGGACCTCCCACTTACAGAGCAGACAACGAAGTCATCTGCACCTCGTATTATTCAAAGCTGGTGCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp ACTTTCCATTGGCTAAATCGGCATGGCGGTCATCCTTaGTACAGACAGAACTCAGAGACCCCACAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: TFHWLNRHGGHP*YRQNSETPQGH
Trigger: GTGACCCTGTGGGGTCTCTGAGTTCTGTCTGTATCAAGGATGACCGCCATGCCGATTTAGCCAATGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp ATAGTAACCATCTGCACATCTCTCACACCAGGATCCTaGGTAACCCGGGGCACACTGGTCACAAACCACTTC +
Preference number: 6 (lower is better)
Translates to: IVTICTSLTPGS*VTRGTLVTNHF
Trigger: GAAGTGGTTTGTGACCAGTGTGCCCCGGGTTACTCAGGATCCTGGTGTGAGAGATGTGCAGATGGTTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GATTCGGAGATCAAGTCTGTCTTATTCGCCGTCTTGTaGGCATCAGCAGCCAGCATCTCAGCTTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: DSEIKSVLFAVL*ASAASISASSV
Trigger: GACAGAGGAAGCTGAGATGCTGGCTGCTGATGCTCACAAGACGGCGAATAAGACAGACTTGATCTCCGAATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GATCTGACCTCCGAGCCCTCCAACAAACATCAGCGTTaGATTGTTTATGTCCAGAACCTTCGACGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: DLTSEPSNKHQR*IVYVQNLRRSR
Trigger: CCTGGACCGTCGAAGGTTCTGGACATAAACAATTCAACGCTGATGTTTGTTGGAGGGCTCGGAGGTCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp GTCGTAAGACACAGTGTATTTCAGGAAACCGCCAAATaGTGTCAGCTTGTTTCCGAGGTAGGCCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VVRHSVFQETAK*CQLVSEVGLRS
Trigger: GCTCCTGAGGCCTACCTCGGAAACAAGCTGACAGCATTTGGCGGTTTCCTGAAATACACTGTGTCTTACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CCAACCTCCATGGAAATGTTGGCAATTCTGCTCTGCTaGAGTCCCTGGCCGTATGATGCTTTGATGAGGATG +
Preference number: 6 (lower is better)
Translates to: PTSMEMLAILLC*SPWPYDALMRM
Trigger: CATCCTCATCAAAGCATCATACGGCCAGGGACTGCAGCAGAGCAGAATTGCCAACATTTCCATGGAGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTGCTTCCAGCTTCCTTAAGGAGCTCCTCAGCAGCCTaGAGTTTTTCACTGTGGTTGGAAAGGAGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLPASLRSSSAA*SFSLWLERRLL
Trigger: CAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCAGGCTGCTGAGGAGCTCCTTAAGGAAGCTGGAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTCCTCTGTCAGTGTCTGGATGTTGCTGTGGACGTGTaGCGCACTGGTGGCATTCAAAGACACGTTTCTAAC +
Preference number: 6 (lower is better)
Translates to: FLCQCLDVAVDV*RTGGIQRHVSN
Trigger: GTTAGAAACGTGTCTTTGAATGCCACCAGTGCGGCACACGTCCACAGCAACATCCAGACACTGACAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AGGAATCTTCGTTCTGGGAGCTTCCAAAGCAGCCATTaGACTTCCCCTCTCTCTCGATGTAATTCCACAGGC +
Preference number: 6 (lower is better)
Translates to: RNLRSGSFQSSH*TSPLSRCNSTG
Trigger: GCCTGTGGAATTACATCGAGAGAGAGGGGAAGTGCAATGGCTGCTTTGGAAGCTCCCAGAACGAAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CTGGTGTCATATGCATCGAAGACAGCTAGCAGTCCTTaGTTCCGGTTCCGCTGGAAGGCGATTTTATACCAG +
Preference number: 6 (lower is better)
Translates to: LVSYASKTASSP*FRFRWKAILYQ
Trigger: CTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCAAGGACTGCTAGCTGTCTTCGATGCATATGACACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp AACGCCTTCCTTTTAATGTATTCTGTCTTGACTGTGTaGCACTTGCCATCACTGAGCAGGGCAGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: NAFLLMYSVLTV*HLPSLSRAGWE
Trigger: CTCCCACCCTGCCCTGCTCAGTGATGGCAAGTGGCACACAGTCAAGACAGAATACATTAAAAGGAAGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CAGTTGTTGGTGCCATCGATTGCGTGTGATATCGGATaGCGCTCTCTAGGATTCGTACTGTTACCGTCACAG +
Preference number: 6 (lower is better)
Translates to: QLLVPSIACDIG*RSLGFVLLPSQ
Trigger: CTGTGACGGTAACAGTACGAATCCTAGAGAGCGCCATCCGATATCACACGCAATCGATGGCACCAACAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TTCGTTGTCTGCTCTGTAAGTGGGAGGTCCCCGCCGTaGAGTTATTTTGTAGCGGGTCAAACACTCTGTATC +
Preference number: 6 (lower is better)
Translates to: FVVCSVSGRSPP*SYFVAGQTLCI
Trigger: GATACAGAGTGTTTGACCCGCTACAAAATAACTCCACGGCGGGGACCTCCCACTTACAGAGCAGACAACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GCAGACACGGGTGGCTGGAAATCTTTACGCGCCGTCTaGTTCAACGTTGCCACCTTTTCTGTGATTTCTTTG +
Preference number: 6 (lower is better)
Translates to: ADTGGWKSLRAV*FNVATFSVISL
Trigger: CAAAGAAATCACAGAAAAGGTGGCAACGTTGAACCAGACGGCGCGTAAAGATTTCCAGCCACCCGTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GTCATCGTGGAGTTATGCAGAAGGTCGTTTGTCTCCTaGACTGTGGCATTCACTCTGGACAGGTCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: VIVELCRRSFVS*TVAFTLDRSSD
Trigger: ATCAGAGGACCTGTCCAGAGTGAATGCCACAGTCCAGGAGACAAACGACCTTCTGCATAACTCCACGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CACTTTCCATTGGCTAAATCGGCATGGCGGTCATCCTaGATACAGACAGAACTCAGAGACCCCACAGGGTCA +
Preference number: 6 (lower is better)
Translates to: HFPLAKSAWRSS*IQTELRDPTGS
Trigger: TGACCCTGTGGGGTCTCTGAGTTCTGTCTGTATCAAGGATGACCGCCATGCCGATTTAGCCAATGGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACAGAGTGGTCATCGTGGAGTTATGCAGAAGGTCGTTaGTCTCCTGGACTGTGGCATTCACTCTGGACAGGT +
Preference number: 6 (lower is better)
Translates to: TEWSSWSYAEGR*SPGLWHSLWTG
Trigger: ACCTGTCCAGAGTGAATGCCACAGTCCAGGAGACAAACGACCTTCTGCATAACTCCACGATGACCACTCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CGGTTCCGCTGGAAGGCGATTTTATACCAGGTTCCGTaGTTATACCGCCTGTCTGTCATAAGAGTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: RFRWKAILYQVP*LYRLSVIRVRG
Trigger: ACCCCTCACTCTTATGACAGACAGGCGGTATAACAACGGAACCTGGTATAAAATCGCCTTCCAGCGGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CTCCTCCACTGTACTGCCCGGCAGTGTTCAGGCTTCTCCTCTCCTTaGCAACACTGCTGTCATAGTAACAATCTTTGGCTTTGTTGTGAC +
Preference number: 6 (lower is better)
Translates to: LLHCTARQCSGFSSP*QHCCHSNNLWLCCD
Trigger: GTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACAGTGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp GTTCTCAGGCACAAGTCTAACCACGTTGAAGTATTCCTCATAGGGTaGCAAGGACAGGCCCTCAGCTCTTGTGCTTATGGTGAGCCCATT +
Preference number: 6 (lower is better)
Translates to: VLRHKSNHVEVFLIG*QGQALSSCAYGEPI
Trigger: AATGGGCTCACCATAAGCACAAGAGCTGAGGGCCTGTCCTTGCAACCCTATGAGGAATACTTCAACGTGGTTAGACTTGTGCCTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp TCGTCAGCGCTGGGTCTGCCATTGATGAGTGATGTGTaGATCTCTCCATGTTCAAGTGGCACCAGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: SSALGLPLMSDV*ISPCSSGTSFE
Trigger: TTCAAAGCTGGTGCCACTTGAACATGGAGAGATTCACACATCACTCATCAATGGCAGACCCAGCGCTGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTGGGGACATTCACAGTGTTCCACATCAGCAGCCACTaGCAAGTCTATAGCATTAGGGCTTGCTATGTCCAG +
Preference number: 6 (lower is better)
Translates to: LGTFTVFHISSH*QVYSIRACYVQ
Trigger: CTGGACATAGCAAGCCCTAATGCTATAGACTTGGCAGTGGCTGCTGATGTGGAACACTGTGAATGTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TTTCTTCCAGCCAACAGAGTGGTCATCGTGGAGTTATaGAGAAGGTCGTTTGTCTCCTGGACTGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: FLPANRVVIVEL*RRSFVSWTVAF
Trigger: GAATGCCACAGTCCAGGAGACAAACGACCTTCTGCATAACTCCACGATGACCACTCTGTTGGCTGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp GCCCTCGGGGTTTCGTTCCTTCAAGTTGTAGAATCCTaGCTTGCAGCGATCACAGTTCTTACCCTCAACATT +
Preference number: 6 (lower is better)
Translates to: ALGVSFLQVVES*LAAITVLTLNI
Trigger: AATGTTGAGGGTAAGAACTGTGATCGCTGCAAGCCAGGATTCTACAACTTGAAGGAACGAAACCCCGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp AAGAGATGTGTCACATTGGCCAGGACAGTCATCAGCTaGTCACGGTCAATCTCCCTTCTGGTATCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: KRCVTLARTVIS*SRSISLLVSKS
Trigger: GGACTTTGATACCAGAAGGGAGATTGACCGTGACCAGCTGATGACTGTCCTGGCCAATGTGACACATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CACTGGTCACAAACCACTTCCTCTCCATCAGTGAGGTaGCAGGTAGGGCTGAAATTGTTAGAGTCAATGGAG +
Preference number: 6 (lower is better)
Translates to: HWSQTTSSPSVR*QVGLKLLESME
Trigger: CTCCATTGACTCTAACAATTTCAGCCCTACCTGCCACCTCACTGATGGAGAGGAAGTGGTTTGTGACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp CCTGCAGTTTTTCACTGTGGTTGGAAAGGAGGCTGTTaGCCTCCTTCAATGCCTTCAACTTTTCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PAVFHCGWKGGC*PPSMPSTFPEA
Trigger: AGCCTCAGGAAAAGTTGAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCAACCACAGTGAAAAACTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCGAAGACAGCTAGCAGTCCTTGCTTCCGGTTCCGCTaGAAGGCGATTTTATACCAGGTTCCGTTGTTATAC +
Preference number: 6 (lower is better)
Translates to: SKTASSPCFRFR*KAILYQVPLLY
Trigger: GTATAACAACGGAACCTGGTATAAAATCGCCTTCCAGCGGAACCGGAAGCAAGGACTGCTAGCTGTCTTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CACCATAAGCCAAGAGCTGGTCTCCCTGGAACTGCTTaGGTAGCCGCCAGTAAAATGGCTCTGCATAGATAT +
Preference number: 6 (lower is better)
Translates to: HHKPRAGLPGTA*VAASKMALHRY
Trigger: ATATCTATGCAGAGCCATTTTACTGGCGGCTACCAAAGCAGTTCCAGGGAGACCAGCTCTTGGCTTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CTTATTTGTGCTCATCAAGTCAGTGACCAGCCACCCTaGCATATTGGTCACCTGACTAATGGACCACGTGAG +
Preference number: 6 (lower is better)
Translates to: LICAHQVSDQPP*HIGHLTNGPRE
Trigger: CTCACGTGGTCCATTAGTCAGGTGACCAATATGTCAGGGTGGCTGGTCACTGACTTGATGAGCACAAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GTTGGCAATTCTGCTCTGCTGCAGTCCCTGGCCGTATaGTGCTTTGATGAGGATGTAGTCAATATTGCTGAG +
Preference number: 6 (lower is better)
Translates to: VGNSALLQSLAV*CFDEDVVNIAE
Trigger: CTCAGCAATATTGACTACATCCTCATCAAAGCATCATACGGCCAGGGACTGCAGCAGAGCAGAATTGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CAGCGTTCACCTTCTGATGGCGTGCTAACACTCTGGTaGGCTCCTTTTGCAGATTTTCTGTTTGCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: QRSPSDGVLTLW*APFADFLFALQ
Trigger: TTGCAGAGCAAACAGAAAATCTGCAAAAGGAGCTCACCAGAGTGTTAGCACGCCATCAGAAGGTGAACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp CGTAGTCCATTTGGTTCTGATGAGCCACATAGTAAATaGGGCCACTGGAGGCAAATGTCCGAATGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RSPFGSDEPHSK*GHWRQMSECSA
Trigger: AGCTGAGCATTCGGACATTTGCCTCCAGTGGCCTCATTTACTATGTGGCTCATCAGAACCAAATGGACTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp GCTGGTAGGTGGCTGTTATCCTTCCGGCACCGTTGTTaGCGTGAAATAAGACCTTGCCATCTACAATCTCTA +
Preference number: 6 (lower is better)
Translates to: AGRWLLSFRHRC*REIRPCHLQSL
Trigger: TAGAGATTGTAGATGGCAAGGTCTTATTTCACGTCAACAACGGTGCCGGAAGGATAACAGCCACCTACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp TGTACTGCCCGGCAGTGTTCAGGCTTCTCCTCTCCTTaGCAACACTGCTGTCATAGTAACAATCTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: CTARQCSGFSSP*QHCCHSNNLWL
Trigger: AAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCGGGCAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp CACAAGTCTAACCACGTTGAAGTATTCCTCATAGGGTaGCAAGGACAGGCCCTCAGCTCTTGTGCTTATGGT +
Preference number: 6 (lower is better)
Translates to: HKSNHVEVFLIG*QGQALSSCAYG
Trigger: ACCATAAGCACAAGAGCTGAGGGCCTGTCCTTGCAACCCTATGAGGAATACTTCAACGTGGTTAGACTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 90 bp CATATAAATGACGTGCTTCCTGGCCCGACCTCCTTTGATGAGGACTaGAGGCTCATAATTGGATGTTCCGGTGCCAAGTGTAGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: HINDVLPGPTSFDED*RLIIGCSGAKCRVE
Trigger: TTCTACTCTACACTTGGCACCGGAACATCCAATTATGAGCCTCAAGTCCTCATCAAAGGAGGTCGGGCCAGGAAGCACGTCATTTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp AGCATCCACCCATTCTCTACCCTTGGCAATGAGCTCTaGGGTCACATTTTGTTCTTCTTGAACACGCAGCTT +
Preference number: 6 (lower is better)
Translates to: SIHPFSTLGNEL*GHILFFLNTQL
Trigger: AAGCTGCGTGTTCAAGAAGAACAAAATGTGACCTCAGAGCTCATTGCCAAGGGTAGAGAATGGGTGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CGGCAGTGTTCAGGCTTCTCCTCTCCTTTGCAACACTaGTGTCATAGTAACAATCTTTGGCTTTGTTGTGAC +
Preference number: 6 (lower is better)
Translates to: RQCSGFSSPLQH*CHSNNLWLCCD
Trigger: GTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGAGGAGAAGCCTGAACACTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp TCTGGTGAGCTCCTTTTGCAGATTTTCTGTTTGCTCTaGAATCCCTTCGAGCTGGATCTCTGCTCGAATCTT +
Preference number: 6 (lower is better)
Translates to: SGELLLQIFCLL*NPFELDLCSNL
Trigger: AAGATTCGAGCAGAGATCCAGCTCGAAGGGATTGCAGAGCAAACAGAAAATCTGCAAAAGGAGCTCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp ACTGTGGTTGGAAAGGAGGCTGTTGGCCTCCTTCAATaGCTTCAACTTTTCCTGAGGCTTCTGAAACCTTTT +
Preference number: 6 (lower is better)
Translates to: TVVGKEAVGLLQ*LQLFLRLLKPF
Trigger: AAAAGGTTTCAGAAGCCTCAGGAAAAGTTGAAGGCATTGAAGGAGGCCAACAGCCTCCTTTCCAACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GTAGCATTCTGCTGCATCTCTGTGAAATTCCTTTCCTaGATGAGTCCCAGCAGAGACGAAATGTTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: VAFCCISVKFLS*MSPSRDEMFWC
Trigger: GCACCAGAACATTTCGTCTCTGCTGGGACTCATCAAGGAAAGGAATTTCACAGAGATGCAGCAGAATGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp ACAGTCATGAACGCCTTCCTTTTAATGTATTCTGTCTaGACTGTGTGCCACTTGCCATCACTGAGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: TVMNAFLLMYSV*TVCHLPSLSRA
Trigger: TGCCCTGCTCAGTGATGGCAAGTGGCACACAGTCAAGACAGAATACATTAAAAGGAAGGCGTTCATGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS TCA 72 bp TGTGTGAATCTCTCCATGTTCAAGTGGCACCAGCTTTaGATAATACGAGGTGCAGATGACTTCGTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: CVNLSMFKWHQL*IIRGADDFVVC
Trigger: GCAGACAACGAAGTCATCTGCACCTCGTATTATTCAAAGCTGGTGCCACTTGAACATGGAGAGATTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS GCA 72 bp CGGGGTTTCGTTCCTTCAAGTTGTAGAATCCTGGCTTaGAGCGATCACAGTTCTTACCCTCAACATTTTTCT +
Preference number: 6 (lower is better)
Translates to: RGFVPSSCRILA*SDHSSYPQHFS
Trigger: AGAAAAATGTTGAGGGTAAGAACTGTGATCGCTGCAAGCCAGGATTCTACAACTTGAAGGAACGAAACCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CAA 72 bp GTCTGGTTCAACGTTGCCACCTTTTCTGTGATTTCTTaGATGTTTGCATGTAGCTGCTCAATGAACGTGGCC +
Preference number: 6 (lower is better)
Translates to: VWFNVATFSVIS*MFACSCSMNVA
Trigger: GGCCACGTTCATTGAGCAGCTACATGCAAACATCAAAGAAATCACAGAAAAGGTGGCAACGTTGAACCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TGCAGATTTTCTGTTTGCTCTGCAATCCCTTCGAGCTaGATCTCTGCTCGAATCTTCTTGGCATTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: CRFSVCSAIPSS*ISARIFLAFSF
Trigger: AAAGGAAAATGCCAAGAAGATTCGAGCAGAGATCCAGCTCGAAGGGATTGCAGAGCAAACAGAAAATCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9
CDS CCA 72 bp TCTCCTTTGCAACACTGCTGTCATAGTAACAATCTTTaGCTTTGTTGTGACAGTTGCATTCCTCACACTCGT +
Preference number: 6 (lower is better)
Translates to: SPLQHCCHSNNL*LCCDSCIPHTR
Trigger: ACGAGTGTGAGGAATGCAACTGTCACAACAAAGCCAAAGATTGTTACTATGACAGCAGTGTTGCAAAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035471.9