Pregenerated sensors for LAIR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055541Ensembl transcript IDs: ENSMUST00000068865.13, ENSMUST00000086400.13, ENSMUST00000086401.10, ENSMUST00000108600.9, ENSMUST00000131126.3, ENSMUST00000136616.8, ENSMUST00000149395.8, ENSMUST00000205296.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGTCCCCGGAAACAGCTGGAGTTGGCTCAGGGGTTCCTGGACCTaGACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGCTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RVPGNSWSWLRGSWT*TKFKDVRFSEVGLR Trigger: CCTCAAGCCCACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCTGAGCCAACTCCAGCTGTTTCCGGGGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | CAATCTAGGGTCCCCGGAAACAGCTGGAGTTGGCTCAGGGGTTCCTaGACCTGCACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: QSRVPGNSWSWLRGS*TCTKFKDVRFSEVG Trigger: GCCCACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCTGAGCCAACTCCAGCTGTTTCCGGGGACCCTAGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | TCCTATCCTGCATGTCGCCTACAGGCTGGCTCCAGACACCAAGAATaGATTGGCGGGGGATTGGCCTCCCCTCTTTATAAGCACAGACTC | + |
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Preference number: 1 (lower is better) Translates to: SYPACRLQAGSRHQE*IGGGLASPLYKHRL Trigger: GAGTCTGTGCTTATAAAGAGGGGAGGCCAATCCCCCGCCAATCCATTCTTGGTGTCTGGAGCCAGCCTGTAGGCGACATGCAGGATAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | CCATATCTGTGCTCTGTGAGGTCACAGCTCCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCTGGATATACGTCACCTCTTGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: PYLCSVRSQLRLPSV*GSDGPAGYTSPLEG Trigger: ACCTTCAAGAGGTGACGTATATCCAGCTGGACCATCACTCCCTCACACAGAGGGCAGTCGGAGCTGTGACCTCACAGAGCACAGATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR GCA 90 bp | GGCCCTAGTGGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTaGCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: GPSGFFRLFHVCLQV*PGSVSDDGCICAGL Trigger: GAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCCACTAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR GCA 90 bp | GGAGTGATGGTCCAGCTGGATATACGTCACCTCTTGAAGGTCTCCTaGAACTGGGGTCCAGGTTTCTGTCCATCTGTCCTCAGGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GVMVQLDIRHLLKVS*NWGPGFCPSVLRKP Trigger: AGGCTTCCTGAGGACAGATGGACAGAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGACCATCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
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| 3UTR GCA 90 bp | CACGAGAAAGGCAGGGCTCAGGTAATGGAACGATACCCTGACGCCTaGGCACATTTTACTACGAGCAACGGATGTCAGCGCCATCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: HEKGRAQVMERYPDA*AHFTTSNGCQRHLV Trigger: TACAAGATGGCGCTGACATCCGTTGCTCGTAGTAAAATGTGCGCAGGCGTCAGGGTATCGTTCCATTACCTGAGCCCTGCCTTTCTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | AACGGATGTCAGCGCCATCTTGTAACGGCCTGCCTGGGCATGTCTTaGCCTGTTCTGCTATGTTCTCAGCCCCAGGTTTTAAAGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: NGCQRHLVTACLGMS*PVLLCSQPQVLKLT Trigger: TGTGAGCTTTAAAACCTGGGGCTGAGAACATAGCAGAACAGGCCAAGACATGCCCAGGCAGGCCGTTACAAGATGGCGCTGACATCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | ATGGTCCAGCTGGATATACGTCACCTCTTGAAGGTCTCCTGCAACTaGGGTCCAGGTTTCTGTCCATCTGTCCTCAGGAAGCCTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: MVQLDIRHLLKVSCN*GPGFCPSVLRKPVI Trigger: GATGACAGGCTTCCTGAGGACAGATGGACAGAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
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| 3UTR GCA 90 bp | TACCTGCTGAGAGACCTTGAGACATTCCAGAGACACATCCTATCCTaGATGTCGCCTACAGGCTGGCTCCAGACACCAAGAATGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: YLLRDLETFQRHILS*MSPTGWLQTPRMDW Trigger: CCAATCCATTCTTGGTGTCTGGAGCCAGCCTGTAGGCGACATGCAGGATAGGATGTGTCTCTGGAATGTCTCAAGGTCTCTCAGCAGGTA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | GGACCTGCACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGCTTaGGGCTGGATCATCCAGGAAGATGATCAGTATAAACCTGGAACA | + |
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Preference number: 1 (lower is better) Translates to: GPARSSRTSGSQRWA*GWIIQEDDQYKPGT Trigger: TGTTCCAGGTTTATACTGATCATCTTCCTGGATGATCCAGCCTCAAGCCCACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | CAACTACCACTGTTCTCCAAGACTCTGCTACCTGCTGAGAGACCTTaGGACATTCCAGAGACACATCCTATCCTGCATGTCGCCTACAGG | + |
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Preference number: 1 (lower is better) Translates to: QLPLFSKTLLPAERP*DIPETHPILHVAYR Trigger: CCTGTAGGCGACATGCAGGATAGGATGTGTCTCTGGAATGTCTCAAGGTCTCTCAGCAGGTAGCAGAGTCTTGGAGAACAGTGGTAGTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | TGCAAGACCTTGATGTATATGGAATATGATGGGGACATGGTCCAGTaGCTCAGCTTGCTCTGTCTGCCCTGTGGTAGAAGGATAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: CKTLMYMEYDGDMVQ*LSLLCLPCGRRIDS Trigger: AGAGTCTATCCTTCTACCACAGGGCAGACAGAGCAAGCTGAGCCACTGGACCATGTCCCCATCATATTCCATATACATCAAGGTCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | GGGGAGGGGTTAGAATCACGTAGATATGACTCTCCATCCTTCATGTaGGTGATCCAGCCCAGTCAGAATCCTGAAAGAGAAATGCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: GEGLESRRYDSPSFM*VIQPSQNPEREMLV Trigger: CACTAGCATTTCTCTTTCAGGATTCTGACTGGGCTGGATCACTCACATGAAGGATGGAGAGTCATATCTACGTGATTCTAACCCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | TATGGATATTTTCACCGACCTCTGTCTTCAGCTATTGTTGCACACTaGTGTCCCCATCTTCAGCTACCTGGGCCTTTCAATAGAAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: YGYFHRPLSSAIVAH*CPHLQLPGPFNRRV Trigger: CACCCTTCTATTGAAAGGCCCAGGTAGCTGAAGATGGGGACATCAGTGTGCAACAATAGCTGAAGACAGAGGTCGGTGAAAATATCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | GTTGCTTTGACTAGATGTGATCATGATAAATTACATTTCTCTAGCTaGCCCACTCTACCGTCTCGCCAGCAAAACGCATGCAGGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: VALTRCDHDKLHFSS*PTLPSRQQNACRPL Trigger: GAGTGGCCTGCATGCGTTTTGCTGGCGAGACGGTAGAGTGGGTCAGCTAGAGAAATGTAATTTATCATGATCACATCTAGTCAAAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | TGCCCAGGTTCCTTCAGCTGGGGGTCAAAAGTCAGAGAACAAGTGTaGCATGAAACTTGCAAACTTTCTAATCAGGATCCTTTCCCAATG | + |
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Preference number: 1 (lower is better) Translates to: CPGSFSWGSKVREQV*HETCKLSNQDPFPM Trigger: CATTGGGAAAGGATCCTGATTAGAAAGTTTGCAAGTTTCATGTCACACTTGTTCTCTGACTTTTGACCCCCAGCTGAAGGAACCTGGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR GCA 90 bp | TTGAGTCCTTACAGTCTGTATTCCAAGACCCACATGGACTGTAGATaGTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSPYSLYSKTHMDCR*SIFKNTHDALHKAW Trigger: CCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTAAGGACTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR CCA 90 bp | TTTCTGCCTCCCATTCTGGAAATGGGTTACATCTATTTGATGTGTTaGCCATGGGAACCCCCAAACCACCAAGTCTCTTTCCAAAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: FLPPILEMGYIYLMC*PWEPPNHQVSFQSY Trigger: ATAGCTTTGGAAAGAGACTTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGGAGGCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
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| 3UTR CCA 90 bp | GAGTGTGTAAGAACAAAGACTGAGAAAAGAAGGAGCCTCCATCTCTaGGAACCTACTGTTGCTATCACAGAATCCCTGTTGAGGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: ECVRTKTEKRRSLHL*EPTVAITESLLRFQ Trigger: CTGAAACCTCAACAGGGATTCTGTGATAGCAACAGTAGGTTCCCAGAGATGGAGGCTCCTTCTTTTCTCAGTCTTTGTTCTTACACACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | TATATAGTTTTCTGCCTCCCATTCTGGAAATGGGTTACATCTATTTaGTGTGTTGGCCATGGGAACCCCCAAACCACCAAGTCTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: YIVFCLPFWKWVTSI*CVGHGNPQTTKSLS Trigger: GGAAAGAGACTTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGGAGGCAGAAAACTATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
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| 3UTR TCA 90 bp | CAGGAAGAGGGAGCTCACAGGGCTATATCACAGGAATGGAGGTACTaGAATCCAAACAACATTTGGACCTCCACAAGTAAGTTACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: QEEGAHRAISQEWRY*NPNNIWTSTSKLQK Trigger: TTTCTGTAACTTACTTGTGGAGGTCCAAATGTTGTTTGGATTTCAGTACCTCCATTCCTGTGATATAGCCCTGTGAGCTCCCTCTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | TATATTATGTCAACTACCACTGTTCTCCAAGACTCTGCTACCTGCTaGGAGACCTTGAGACATTCCAGAGACACATCCTATCCTGCATGT | + |
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Preference number: 1 (lower is better) Translates to: YIMSTTTVLQDSATC*ETLRHSRDTSYPAC Trigger: ACATGCAGGATAGGATGTGTCTCTGGAATGTCTCAAGGTCTCTCAGCAGGTAGCAGAGTCTTGGAGAACAGTGGTAGTTGACATAATATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR GCA 90 bp | GATGGAGCCTTGCTAGGGATACCTTCAAGAACTCATAAAAATTTTTaGTCTCTGTCTACTATGCAGATACATGTGATGGTTGGAGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: DGALLGIPSRTHKNF*SLSTMQIHVMVGAA Trigger: TGCAGCTCCAACCATCACATGTATCTGCATAGTAGACAGAGAGCAAAAATTTTTATGAGTTCTTGAAGGTATCCCTAGCAAGGCTCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR GCA 90 bp | CATTACATGAGTCACAGGTTTCAAGTTTTATTTCCTTTCAATGGCTaGCTGAAAGACTGGTTCGTCAAGTGGACACAGATCCTGAATCTT | + |
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Preference number: 1 (lower is better) Translates to: HYMSHRFQVLFPFNG*LKDWFVKWTQILNL Trigger: AAGATTCAGGATCTGTGTCCACTTGACGAACCAGTCTTTCAGGCAGCCATTGAAAGGAAATAAAACTTGAAACCTGTGACTCATGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | GTTTTATTTCCTTTCAATGGCTGCCTGAAAGACTGGTTCGTCAAGTaGACACAGATCCTGAATCTTCTAGTAAGTATGATTCTAACCTCG | + |
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Preference number: 1 (lower is better) Translates to: VLFPFNGCLKDWFVK*TQILNLLVSMILTS Trigger: CGAGGTTAGAATCATACTTACTAGAAGATTCAGGATCTGTGTCCACTTGACGAACCAGTCTTTCAGGCAGCCATTGAAAGGAAATAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR CCA 90 bp | CACAGGTTTCAAGTTTTATTTCCTTTCAATGGCTGCCTGAAAGACTaGTTCGTCAAGTGGACACAGATCCTGAATCTTCTAGTAAGTATG | + |
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Preference number: 1 (lower is better) Translates to: HRFQVLFPFNGCLKD*FVKWTQILNLLVSM Trigger: CATACTTACTAGAAGATTCAGGATCTGTGTCCACTTGACGAACCAGTCTTTCAGGCAGCCATTGAAAGGAAATAAAACTTGAAACCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR TCA 90 bp | CAACACATACCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTaGATATGTTCAAGTCATCCAGTGGCAGTTGTGTTGAGTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: QHIPSRNTNPKFNHQ*ICSSHPVAVVLSIC Trigger: ACAAATACTCAACACAACTGCCACTGGATGACTTGAACATATTCACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGGTATGTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
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| 3UTR CCA 90 bp | CTTCGAATAGATACAGCTATAATGTCCAGTAATGGTTTCATTCACTaGCCCAATCTCAAATTCATCCTCTGTTTTATAAGGCTCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LRIDTAIMSSNGFIH*PNLKFILCFIRLSA Trigger: AGCACTGAGCCTTATAAAACAGAGGATGAATTTGAGATTGGGCCAGTGAATGAAACCATTACTGGACATTATAGCTGTATCTATTCGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
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| 3UTR CCA 90 bp | GAATTATATGCACCCTTTTGTAGCCTTCATTTCTCCACTCATCTTTaGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTC | + |
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Preference number: 1 (lower is better) Translates to: ELYAPFCSLHFSTHL*ITMKTEFESLQSVF Trigger: GAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCAAAGATGAGTGGAGAAATGAAGGCTACAAAAGGGTGCATATAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR CAA 90 bp | TTGCACCAGGGCTCAGGCTGCTGGTGGAGGCAGGACTCAGGAGTTTaGACTGTGCTTTCCCCATGCCAGCTCCAGGCAGGCATCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LHQGSGCWWRQDSGV*TVLSPCQLQAGIRV Trigger: TACCCTGATGCCTGCCTGGAGCTGGCATGGGGAAAGCACAGTCAAAACTCCTGAGTCCTGCCTCCACCAGCAGCCTGAGCCCTGGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTTCCTGGACCTGCACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGCCAGCCTTCAGCTGCATaGGTACATCCCAGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RGSWTCTKFKDVRFSEVGQPSAA*VHPSQS Trigger: ACTCTGACTGGGATGTACTCATGCAGCTGAAGGCTG...GCCCACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR-3UTR TCA 90 bp | TCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SIRPGTEKGLSLQLHEYIRLPSV*GSDGPA Trigger: AGCTGGACCATCACTCCCTCACACAGAGGGCAGTCG...GATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTCAGCCATAGTCCCTGCTTTTTCTaGCGGTGCCTGAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VCPGSVSDDGCICAGLSHSPCFF*RCLRKQ Trigger: CTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACT...ATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTCAGCCATATTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: CAQAQCLMMAAYVLDSAIFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...TATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SIRPGTEKGLSLQLHEYIFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...GATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTCAGCCATACTCAGCCATATCTGTaGTCTGTGAGGTCACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VCPGSVSDDGCICAGLSHTQPYL*SVRSQL Trigger: GAGCTGTGACCTCACAGAGCACAGATATGGCTGAGT...ATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAFHTRLIPKEGPSGFFRFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...CCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAAAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGTGGAGGCAGGACTCAGGAGTTTTGACTGTGCTTTCCCCATGCCAGCTCACAACTTTCTCAGCTaGTTCATCTCCTCACTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLVEAGLRSFDCAFPMPAHNFLS*FISSLR Trigger: CCTTAGTGAGGAGATGAAGCAGCTGAGAAAGTTGTG...AGCTGGCATGGGGAAAGCACAGTCAAAACTCCTGAGTCCTGCCTCCACCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGATGGGGAACAGGGACCTAGCTTTCCACACCAGGCTGATCCCAAAAGAACTCAGCCATATCTGTaGTCTGTGAGGTCACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HLDGEQGPSFPHQADPKRTQPYL*SVRSQL Trigger: GAGCTGTGACCTCACAGAGCACAGATATGGCTGAGT...TCTTTTGGGATCAGCCTGGTGTGGAAAGCTAGGTCCCTGTTCCCCATCCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGATGGGGAACAGGGACCTAGCTTTCCACACCAGGCTGATCCCAAAAGATGGCTGCATATGTGCTaGACTCAGCCATATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: HLDGEQGPSFPHQADPKRWLHMC*TQPYLC Trigger: GCACAGATATGGCTGAGTCCAGCACATATGCAGCCA...TCTTTTGGGATCAGCCTGGTGTGGAAAGCTAGGTCCCTGTTCCCCATCCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCTGGCTGCATATGTGCTaGACTCAGCCATATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SIRPGTEKGLSLQLHEYIWLHMC*TQPYLC Trigger: GCACAGATATGGCTGAGTCCAGCACATATGCAGCCA...GATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTGGGCTCATTACACAACTGGGGATGTAAAGGCAGCTGGACAATTACAAGTCCCTGCTTTTTCTaGCGGTGCCTGAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSLGSLHNWGCKGSWTITSPCFF*RCLRKQ Trigger: CTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACT...TGTAATTGTCCAGCTGCCTTTACATCCCCAGTTGTGTAATGAGCCCAGTGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTTTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LAFHTRLIPKEGPSGFFRVSDDG*ICAGLS Trigger: GCTGAGTCCAGCACATATGCAGCCATCATCAGACAC...CCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAAAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGGTGGAGGCAGGACTCAGGAGTTTTGACTGTGCTTTCCCCATGCCAGCTATACAATTCATCATCTaGATGGGGAACAGGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LLVEAGLRSFDCAFPMPAIQFII*MGNRDL Trigger: TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTAT...AGCTGGCATGGGGAAAGCACAGTCAAAACTCCTGAGTCCTGCCTCCACCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR CCA 90 bp | ACTAGAGAAGGTGACGGCAGACCAGAAGAAGATGCCACAGCTGAGGATCACCTTCAGCCCTGGCTGGCCTaGAACATGATACATACACAA | + |
|
Preference number: 2 (lower is better) Translates to: TREGDGRPEEDATAEDHLQPWLA*NMIHTQ Trigger: TTGTGTATGTATCATGTTCCAGGCCAGCCAGGGCTG...AAGGTGATCCTCAGCTGTGGCATCTTCTTCTGGTCTGCCGTCACCTTCTCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CAA 90 bp | GTATCTGAGGTTGGACCTGGGGCAGGAGTCTGGATGACATTTTCTTaGATCACCTTTAGCTCCAGCGTCTTACTACGTTCGGACCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VSEVGPGAGVWMTFS*ITFSSSVLLRSDQV Trigger: TACCTGGTCCGAACGTAGTAAGACGCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGGTCCAACCTCAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCCAGTCACACATGGACTGTAGATaGTCCATCTTCAAAAATACC | + |
|
Preference number: 2 (lower is better) Translates to: GLALRRDSAFSCMSTSQSHMDCR*SIFKNT Trigger: GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTG...TGACTGGGATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCACTCAGCCATATCTGTaGTCTGTGAGGTCACAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FHTRLIPKEGPSGFFRLFTQPYL*SVRSQL Trigger: GAGCTGTGACCTCACAGAGCACAGATATGGCTGAGT...GAAAAGCCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGGCCAGCCTTCAGCTGCATaGGTACATCCCAGTCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TVDAPSSKIPMMHSIRPGQPSAA*VHPSQS Trigger: ACTCTGACTGGGATGTACTCATGCAGCTGAAGGCTG...GCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTGGTGGAGGCAGGACTCAGGAGTTTTGACTGTGCTTTCCCCATGCCAGCTCTTTCAATAGAAGGGTaGTCCAAAAGAGGAATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLVEAGLRSFDCAFPMPALSIEG*SKRGMK Trigger: TTTCATTCCTCTTTTGGATCACCCTTCTATTGAAAG...AGCTGGCATGGGGAAAGCACAGTCAAAACTCCTGAGTCCTGCCTCCACCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR GCA 90 bp | CACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACCACATGGACTGTAGATaGTCCATCTTCAAAAATACC | + |
|
Preference number: 2 (lower is better) Translates to: HSIRPGTEKGLSLQLHEYHMDCR*SIFKNT Trigger: GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTG...GTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTCAGCCATATCTATACAATTCATCATCTaGATGGGGAACAGGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: AQAQCLMMAAYVLDSAISIQFII*MGNRDL Trigger: TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTAT...AGATATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPRLPSV*GSDGPA Trigger: AGCTGGACCATCACTCCCTCACACAGAGGGCAGTCG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCACATGGACTGTAGATaGTCCATCTTCAAAAATACC | + |
|
Preference number: 2 (lower is better) Translates to: SIRPGTEKGLSLQLHEYIHMDCR*SIFKNT Trigger: GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTG...GATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGATGGGGAACAGGGACCTAGCTTTCCACACCAGGCTGATCCCAAAAGAAATACAATTCATCATCTaGATGGGGAACAGGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: IWMGNRDLAFHTRLIPKEIQFII*MGNRDL Trigger: TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTAT...TTCTTTTGGGATCAGCCTGGTGTGGAAAGCTAGGTCCCTGTTCCCCATCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCCTGCAACTGGGGTCTaGAGTCATCTCCAGGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SLYSKTHMDCRCSIFKNTPATGV*SHLQAI Trigger: AATGGCCTGGAGATGACTCCAGACCCCAGTTGCAGG...GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136616.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCATCTGCAACTATGTCTaGAGTCATCTCCAGGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: FHTRLIPKEGPSGFFRLFICNYV*SHLQAI Trigger: AATGGCCTGGAGATGACTCCAGACATAGTTGCAGAT...GAAAAGCCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PYSLYSKTHMDCRCSIFKVSDDG*ICAGLS Trigger: GCTGAGTCCAGCACATATGCAGCCATCATCAGACAC...TTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTGCATACAATTCATCATCTaGATGGGGAACAGGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: KEGPSGFFRLFHVCLQVCIQFII*MGNRDL Trigger: TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTAT...GCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCCACTAGGGCCTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCTCATTACACAACTGGGGATGTAAAGGCAGCTGGACAATTACAGTGCTAATTCCAAGACCCACATaGACTGTAGATGCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LGSLHNWGCKGSWTITVLIPRPT*TVDAPS Trigger: AGATGGAGCATCTACAGTCCATGTGGGTCTTGGAAT...TAGCACTGTAATTGTCCAGCTGCCTTTACATCCCCAGTTGTGTAATGAGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
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| 3UTR CAA 90 bp | CAATGTTTGGAAATGACCCTCTCCAATACCTCTACCAAACTCCCTTaGGGTCCTACCGTTGTAGGATTTGTCTCATGCTGGACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: QCLEMTLSNTSTKLP*GPTVVGFVSCWTSC Trigger: ACATGAAGTCCAGCATGAGACAAATCCTACAACGGTAGGACCCAAAGGGAGTTTGGTAGAGGTATTGGAGAGGGTCATTTCCAAACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR TCA 90 bp | TACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATCAGCCTTCAGCTGCATaGGTACATCCCAGTCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: YSLYSKTHMDCRCSIFKNQPSAA*VHPSQS Trigger: ACTCTGACTGGGATGTACTCATGCAGCTGAAGGCTG...ATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACATAAGGCCTGGCACTaGGAAGGGACTCAGCCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPHKAWH*EGTQPS Trigger: TGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGATCAACACATACCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTGAACATAAGGCCTGGCACTaGGAAGGGACTCAGCCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LINTYHQETPTQSSIISEHKAWH*EGTQPS Trigger: TGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATG...TTCACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGGTATGTGTTGATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACCTGGGGCAGGAGTCTaGATGACATTTTCTTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: SKTHMDCRCSIFKNTHDAPGAGV*MTFSLI Trigger: GATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGG...TGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136616.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGGACCTAAAGGTCTCCTGCAACTaGGGTCTGGAGTCATCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VMILTHIQFIIWMGNRDLKVSCN*GLESSP Trigger: TGGAGATGACTCCAGACCCCAGTTGCAGGAGACCTT...TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136616.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACTCTGTGTGAGGGAGTaGTGGTCCAGCTGGATATAC | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPLCVRE*WSSWIY Trigger: GTATATCCAGCTGGACCATCACTCCCTCACACAGAG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTTTGGGAGTCCCTGCTTTTTCTGACGGTGCCTGAGGAAGCAGAACAGAAGGGCTCTGAAAGTTATTaGAATATAGTCTTCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VVWESLLFLTVPEEAEQKGSESY*NIVFLS Trigger: ACTTAGGAAGACTATATTGCAATAACTTTCAGAGCC...CTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACTCCCAAACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATACTCTCTTCTGGCCTCTaGTGCTGTCTTTTGTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTWTVDAPSSKIPMMHSILSSGL*CCLLLF Trigger: AAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAG...TATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACTCTTGAAGGTCTCCTaGAACTGGGGTCTGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPLLKVS*NWGLES Trigger: TGACTCCAGACCCCAGTTGCAGGAGACCTTCAAGAG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136616.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGAAGCCTGTCATCTaGAACTATGTCTGGAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PTWTVDAPSSKIPMMHSIRKPVI*NYVWSH Trigger: ATGACTCCAGACATAGTTGCAGATGACAGGCTTCCT...TATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCATATGAGTATTTTTCTCTCACTGTGCAGCCCTaGCTGGCCTGGAACATGATA | + |
|
Preference number: 2 (lower is better) Translates to: AEPVLAASIFVSSYEYFSLTVQP*LAWNMI Trigger: TATCATGTTCCAGGCCAGCCAGGGCTGCACAGTGAG...AGAAAAATACTCATATGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
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| 3UTR CAA 90 bp | ATATATAGTTTTCTGCCTCCCATTCTGGAAATGGGTTACATCTATTaGATGTGTTGGCCATGGGAACCCCCAAACCACCAAGTCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IYSFLPPILEMGYIY*MCWPWEPPNHQVSF Trigger: GAAAGAGACTTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGGAGGCAGAAAACTATATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAATACCCATGATGCACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCGGCTCTGAAAGTTATTaGAATATAGTCTTCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SKIPMMHSIRPGTEKGLSGSESY*NIVFLS Trigger: ACTTAGGAAGACTATATTGCAATAACTTTCAGAGCC...GCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTGCGGCTCTGAAAGTTATTaGAATATAGTCTTCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KEGPSGFFRLFHVCLQVCGSESY*NIVFLS Trigger: ACTTAGGAAGACTATATTGCAATAACTTTCAGAGCC...GCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCCACTAGGGCCTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCAATACAATTCATCATCTaGATGGGGAACAGGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SKTHMDCRCSIFKNTHDAIQFII*MGNRDL Trigger: TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTAT...TGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCAAGCAGATCAGTCAACGCCTTACAGCCTGTTTTCAGCAAGCATGCAGCCCAACCAATATGTAATTaGCACTCAAAGAACTGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: FSSRSVNALQPVFSKHAAQPICN*HSKNWY Trigger: GTACCAGTTCTTTGAGTGCCAATTACATATTGGTTG...GGCTGCATGCTTGCTGAAAACAGGCTGTAAGGCGTTGACTGATCTGCTTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCATTTTTCTTCCAATCCTaGTCAACACATACCATCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVQTCAEPVLAASIFVSSFFFQS*STHTIK Trigger: CTTGATGGTATGTGTTGATCAGGATTGGAAGAAAAA...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR GCA 90 bp | TCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACACATGGACTGTAGATaGTCCATCTTCAAAAATACC | + |
|
Preference number: 2 (lower is better) Translates to: SKTHMDCRCSIFKNTHDAHMDCR*SIFKNT Trigger: GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTG...TGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATGCCTTTCCCTTTCAGTaGTCCTTTTTCTTCCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: YSLYSKTHMDCRCSIFKNAFPFQ*SFFFQS Trigger: GGATTGGAAGAAAAAGGAGCACTGAAAGGGAAAGGC...ATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGACAGAGAATCAGAGATCCATTTGTTCACACACTCAAGAGTTCCATAAGTCCTGTGCAGAGCCTGTaGTTGCTGCTTCAATTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RRQRIRDPFVHTLKSSISPVQSL*LLLQFL Trigger: CAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGG...ACTTATGGAACTCTTGAGTGTGTGAACAAATGGATCTCTGATTCTCTGTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAAGTTATTTGGAGCTCAGCCTCCATTTCCAGAGAATTTACAGCCTTTCTGATCTATTTGATGTGTTaGCCATGGGAACCCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: EKVIWSSASISREFTAFLIYLMC*PWEPPN Trigger: GTTTGGGGGTTCCCATGGCCAACACATCAAATAGAT...CAGAAAGGCTGTAAATTCTCTGGAAATGGAGGCTGAGCTCCAAATAACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR TCA 90 bp | GGCTATATCACAGGAATGGAGGTACTGAAATCCAAACAACATTTGGACCTCCACAATATAATCTCACAGTaGTTCAGTGTTCTTCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GYITGMEVLKSKQHLDLHNIISQ*FSVLPL Trigger: GAGTGGAAGAACACTGAATCACTGTGAGATTATATT...GTGGAGGTCCAAATGTTGTTTGGATTTCAGTACCTCCATTCCTGTGATATAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACACTGTTGTTGTTGCTaGTCTGTCTCTGAGTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPHCCCC*SVSESN Trigger: GTTAGACTCAGAGACAGATCAGCAACAACAACAGTG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCAGGCTCTGAAAGTTATTaGAATATAGTCTTCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LVQTCAEPVLAASIFVSSGSESY*NIVFLS Trigger: ACTTAGGAAGACTATATTGCAATAACTTTCAGAGCC...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGGCGGCTCTGAAAGTTATTaGAATATAGTCTTCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TVDAPSSKIPMMHSIRPGGSESY*NIVFLS Trigger: ACTTAGGAAGACTATATTGCAATAACTTTCAGAGCC...GCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTTATTACTGTTACCACTGTTGTTGTTGCTGATCTGTCTCTGAGTCTAACTGCCTTTCCCTTTCAGTaGTCCTTTTTCTTCCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: EVITVTTVVVADLSLSLTAFPFQ*SFFFQS Trigger: GGATTGGAAGAAAAAGGAGCACTGAAAGGGAAAGGC...AGTTAGACTCAGAGACAGATCAGCAACAACAACAGTGGTAACAGTAATAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCAATTCCAAGACCCACATaGACTGTAGATGCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPIPRPT*TVDAPS Trigger: AGATGGAGCATCTACAGTCCATGTGGGTCTTGGAAT...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR CAA 90 bp | AGGTGGCAGAAATTCATTGATATGAAGAAGCATATTGAGTATATATaGTGGCTTTGGTCTGATTTGGGAATAAGGTGTGGTATGAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RWQKFIDMKKHIEYI*WLWSDLGIRCGMRA Trigger: GGCCCTCATACCACACCTTATTCCCAAATCAGACCAAAGCCACAATATATACTCAATATGCTTCTTCATATCAATGAATTTCTGCCACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTTCAGAGTACTATGAGGTACAGTGCACACTACAAAAGAAGAAAGGTAAAACACTGTTGTTGTTGCTaGTCTGTCTCTGAGTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SVQSTMRYSAHYKRRKVKHCCCC*SVSESN Trigger: GTTAGACTCAGAGACAGATCAGCAACAACAACAGTG...TTTTACCTTTCTTCTTTTGTAGTGTGCACTGTACCTCATAGTACTCTGAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAAGTTATTTGGAGCTCAGCCTCCATTTCCAGAGAATTTACAGCCTTTCTGCTGATTACAAACCTTTaGATCTACAATGTACCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: EKVIWSSASISREFTAFLLITNL*IYNVPA Trigger: GGCAGGTACATTGTAGATTCAAAGGTTTGTAATCAG...CAGAAAGGCTGTAAATTCTCTGGAAATGGAGGCTGAGCTCCAAATAACTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR CCA 90 bp | GACAAATATAATCTCACAGTGATTCAGTGTTCTTCCACTCCATGTGCACTAATAATTCCAAGACCCACATaGACTGTAGATGCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: DKYNLTVIQCSSTPCALIIPRPT*TVDAPS Trigger: AGATGGAGCATCTACAGTCCATGTGGGTCTTGGAAT...TATTAGTGCACATGGAGTGGAAGAACACTGAATCACTGTGAGATTATATTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACTGGTATGTCCTGTTTaGAGTTATTACTGTTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: WITMKTEFESLQSVFQDPLVCPV*SYYCYH Trigger: GTGGTAACAGTAATAACTTCAAACAGGACATACCAG...TGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTTCAGAGTACTATGAGGTACAGTGCACACTACAAAAGAAGAAAGGTAAAATGCAGAGCCTGTGCTTaGTGCTTCAATTTTTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SVQSTMRYSAHYKRRKVKCRACA*CFNFCK Trigger: CTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCA...TTTTACCTTTCTTCTTTTGTAGTGTGCACTGTACCTCATAGTACTCTGAACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGGACCTATTCTCCACTCATCTTTaGATAACAATGAAAACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VMILTHIQFIIWMGNRDLFSTHL*ITMKTE Trigger: CTCTGTTTTCATTGTTATCCAAAGATGAGTGGAGAA...TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATTTCTCCACTCATCTTTaGATAACAATGAAAACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: YSLYSKTHMDCRCSIFKNFSTHL*ITMKTE Trigger: CTCTGTTTTCATTGTTATCCAAAGATGAGTGGAGAA...ATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | TTGGAAGCCATTGTACCCTGCTCCAGGGGTGAGGAGTaGAATCTAGGGTCCCCGGAAACAGCTGGAGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LEAIVPCSRGEE*NLGSPETAGVG Trigger: GCCAACTCCAGCTGTTTCCGGGGACCCTAGATTGCACTCCTCACCCCTGGAGCAGGGTACAATGGCTTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | GTCCCCGGAAACAGCTGGAGTTGGCTCAGGGGTTCCTaGACCTGCACGAAGTTCAAGGACGTCAGGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VPGNSWSWLRGS*TCTKFKDVRFS Trigger: TGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCTGAGCCAACTCCAGCTGTTTCCGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | TGCTCTGTGAGGTCACAGCTCCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCTGGATATACGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CSVRSQLRLPSV*GSDGPAGYTSP Trigger: AGGTGACGTATATCCAGCTGGACCATCACTCCCTCACACAGAGGGCAGTCGGAGCTGTGACCTCACAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | GGAAACAGCTGGAGTTGGCTCAGGGGTTCCTGGACCTaGACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GNSWSWLRGSWT*TKFKDVRFSEV Trigger: CACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCTGAGCCAACTCCAGCTGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | GGCAGGGCTCAGGTAATGGAACGATACCCTGACGCCTaGGCACATTTTACTACGAGCAACGGATGTCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GRAQVMERYPDA*AHFTTSNGCQR Trigger: GCGCTGACATCCGTTGCTCGTAGTAAAATGTGCGCAGGCGTCAGGGTATCGTTCCATTACCTGAGCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | GCATGTCGCCTACAGGCTGGCTCCAGACACCAAGAATaGATTGGCGGGGGATTGGCCTCCCCTCTTTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACRLQAGSRHQE*IGGGLASPLYK Trigger: CTTATAAAGAGGGGAGGCCAATCCCCCGCCAATCCATTCTTGGTGTCTGGAGCCAGCCTGTAGGCGACATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | ACGAGCAACGGATGTCAGCGCCATCTTGTAACGGCCTaGCTGGGCATGTCTTGGCCTGTTCTGCTATGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSNGCQRHLVTA*LGMSWPVLLCS Trigger: AGAACATAGCAGAACAGGCCAAGACATGCCCAGGCAGGCCGTTACAAGATGGCGCTGACATCCGTTGCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | CTCCAGGTGTGCCCAGGCTCAGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGCCATATCTGTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQVCPGSVSDDG*ICAGLSHICAL Trigger: CAGAGCACAGATATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGCACACCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | GTCCAGCTGGATATACGTCACCTCTTGAAGGTCTCCTaGAACTGGGGTCCAGGTTTCTGTCCATCTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VQLDIRHLLKVS*NWGPGFCPSVL Trigger: GAGGACAGATGGACAGAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | ATATTTATGGTTTGTAGGTTAAGTGATGGCCCGCATTaGACCAGGGCTCAGGCTGCTGGTGGAGGCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: IFMVCRLSDGPH*TRAQAAGGGRT Trigger: AGTCCTGCCTCCACCAGCAGCCTGAGCCCTGGTGCAATGCGGGCCATCACTTAACCTACAAACCATAAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | CTGGATATACGTCACCTCTTGAAGGTCTCCTGCAACTaGGGTCCAGGTTTCTGTCCATCTGTCCTCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LDIRHLLKVSCN*GPGFCPSVLRK Trigger: CTTCCTGAGGACAGATGGACAGAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCAACTGGGGTCTGGAGTCATCTCCAGGCCATTAGTAGCTAGATTTAGCAAGATGTATCTGAGGTaGGACCTGGGGCAGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLQLGSGVISRPLVARFSKMYLR*DLGQES Trigger: AGACTCCTGCCCCAGGTCCAACCTCAGATACATCTT...GCTAAATCTAGCTACTAATGGCCTGGAGATGACTCCAGACCCCAGTTGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136616.8 |
||
| 3UTR TCA 72 bp | TGTTGTTTGGGAGTCCCTGCTTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGGCGGAAAGACAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CCLGVPAFSDGA*GSRTEGRKDKG Trigger: TCCTTTGTCTTTCCGCCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACTCCCAAACAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | GGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTaGCCAGGCTCAGTGTCTGATGATGGCTGCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: GFFRLFHVCLQV*PGSVSDDGCIC Trigger: ACATATGCAGCCATCATCAGACACTGAGCCTGGGCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR CCA 72 bp | TCAGCAGGGAGATCCAAGGAAGCCTTTAGGGTTCACTaGGCTCATTACACAACTGGGGATGTAAAGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAGRSKEAFRVH*AHYTTGDVKAA Trigger: AGCTGCCTTTACATCCCCAGTTGTGTAATGAGCCCAGTGAACCCTAAAGGCTTCCTTGGATCTCCCTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR CCA 72 bp | TTGAAACAGGGTCTCACTGTGCAGCCCTGGCTGGCCTaGAACATGATACATACACAAGGCTGGTCTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LKQGLTVQPWLA*NMIHTQGWSRT Trigger: AGTTCTAGACCAGCCTTGTGTATGTATCATGTTCCAGGCCAGCCAGGGCTGCACAGTGAGACCCTGTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCCAGTGGCAGTTGTGTaGAGTATTTGTGATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SIRPGTEKGLSLQLHEYIPVAVV*SICDNG Trigger: GCCATTATCACAAATACTCAACACAACTGCCACTGG...GATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGGATGGGGAACAGGGACCTAGCTTTCCACACCAGGCTGATCCCAAAAGACCAGTGGCAGTTGTGTaGAGTATTTGTGATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLDGEQGPSFPHQADPKRPVAVV*SICDNG Trigger: GCCATTATCACAAATACTCAACACAACTGCCACTGG...TCTTTTGGGATCAGCCTGGTGTGGAAAGCTAGGTCCCTGTTCCCCATCCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGGTGGAGGCAGGACTCAGGAGTTTTGACTGTGCTTTCCCCATGCCAGCTAGTTTCAGCTATTTTTaGAAACAGGGTCTCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLVEAGLRSFDCAFPMPASFSYF*KQGLTV Trigger: CACAGTGAGACCCTGTTTCAAAAAATAGCTGAAACT...AGCTGGCATGGGGAAAGCACAGTCAAAACTCCTGAGTCCTGCCTCCACCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | CTGTTCTCCAAGACTCTGCTACCTGCTGAGAGACCTTaGGACATTCCAGAGACACATCCTATCCTGCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LFSKTLLPAERP*DIPETHPILHV Trigger: GACATGCAGGATAGGATGTGTCTCTGGAATGTCTCAAGGTCTCTCAGCAGGTAGCAGAGTCTTGGAGAACAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | TGGATATTTTCACCGACCTCTGTCTTCAGCTATTGTTaGACACTGATGTCCCCATCTTCAGCTACCTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WIFSPTSVFSYC*TLMSPSSATWA Trigger: GGCCCAGGTAGCTGAAGATGGGGACATCAGTGTGCAACAATAGCTGAAGACAGAGGTCGGTGAAAATATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | GGTTTCTGTCCATCTGTCCTCAGGAAGCCTGTCATCTaGAACTATGTCTGGAGTCATCTCCAGGCCATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GFCPSVLRKPVI*NYVWSHLQAIS Trigger: ACTAATGGCCTGGAGATGACTCCAGACATAGTTGCAGATGACAGGCTTCCTGAGGACAGATGGACAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| 3UTR CCA 72 bp | TTGATGTATATGGAATATGATGGGGACATGGTCCAGTaGCTCAGCTTGCTCTGTCTGCCCTGTGGTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LMYMEYDGDMVQ*LSLLCLPCGRR Trigger: CCTTCTACCACAGGGCAGACAGAGCAAGCTGAGCCACTGGACCATGTCCCCATCATATTCCATATACATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | TTCTGCCTCCCATTCTGGAAATGGGTTACATCTATTTaGTGTGTTGGCCATGGGAACCCCCAAACCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FCLPFWKWVTSI*CVGHGNPQTTK Trigger: CTTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGGAGGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR TCA 72 bp | TTTCACCGACCTCTGTCTTCAGCTATTGTTGCACACTaGTGTCCCCATCTTCAGCTACCTGGGCCTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FHRPLSSAIVAH*CPHLQLPGPFN Trigger: ATTGAAAGGCCCAGGTAGCTGAAGATGGGGACATCAGTGTGCAACAATAGCTGAAGACAGAGGTCGGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | CGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGCTTaGGGCTGGATCATCCAGGAAGATGATCAGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSSRTSGSQRWA*GWIIQEDDQYK Trigger: TTTATACTGATCATCTTCCTGGATGATCCAGCCTCAAGCCCACCTCTGAGAACCTGACGTCCTTGAACTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | CAAGATGTATCTGAGGTTGGACCTGGGGCAGGAGTCTaGATGACATTTTCTTTGATCACCTTTAGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QDVSEVGPGAGV*MTFSLITFSSS Trigger: GCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGGTCCAACCTCAGATACATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCTGGATGACATTTTCTTaGATCACCTTTAGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FHTRLIPKEGPSGFFRLFWMTFS*ITFSSS Trigger: GCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCA...GAAAAGCCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| 3UTR TCA 72 bp | TCTGGGAACCTACTGTTGCTATCACAGAATCCCTGTTaGGGTTTCAGACTTTGTAGGAAGGAGACCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGNLLLLSQNPC*GFRLCRKETSK Trigger: CTTGCTGGTCTCCTTCCTACAAAGTCTGAAACCTCAACAGGGATTCTGTGATAGCAACAGTAGGTTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | CCCATTCTGGAAATGGGTTACATCTATTTGATGTGTTaGCCATGGGAACCCCCAAACCACCAAGTCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PILEMGYIYLMC*PWEPPNHQVSF Trigger: GAAAGAGACTTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR CCA 72 bp | CAGCAAGCATGCAGCCCCGCCTCTAGCAAGTACAGGTaGCAGAAATTCATTGATATGAAGAAGCATATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQACSPASSKYR*QKFIDMKKHIE Trigger: CTCAATATGCTTCTTCATATCAATGAATTTCTGCCACCTGTACTTGCTAGAGGCGGGGCTGCATGCTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | TATGTAATTGGCACTCAAAGAACTGGTACCCATGCCTaGCACTGTACACAGGACCATGAACCTGAGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: YVIGTQRTGTHA*HCTQDHEPETR Trigger: TCTAGTCTCAGGTTCATGGTCCTGTGTACAGTGTCAGGCATGGGTACCAGTTCTTTGAGTGCCAATTACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| 3UTR TCA 72 bp | CCCATCTTCAGCTACCTGGGCCTTTCAATAGAAGGGTaGTCCAAAAGAGGAATGAAAGAACTAGAGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PIFSYLGLSIEG*SKRGMKELEKV Trigger: CACCTTCTCTAGTTCTTTCATTCCTCTTTTGGATCACCCTTCTATTGAAAGGCCCAGGTAGCTGAAGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | GGAGCTCACAGGGCTATATCACAGGAATGGAGGTACTaGAATCCAAACAACATTTGGACCTCCACAAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GAHRAISQEWRY*NPNNIWTSTSK Trigger: CTTACTTGTGGAGGTCCAAATGTTGTTTGGATTTCAGTACCTCCATTCCTGTGATATAGCCCTGTGAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR GCA 72 bp | GAAAAGAAGGAGCCTCCATCTCTGGGAACCTACTGTTaGTATCACAGAATCCCTGTTGAGGTTTCAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: EKKEPPSLGTYC*YHRIPVEVSDF Trigger: AAAGTCTGAAACCTCAACAGGGATTCTGTGATAGCAACAGTAGGTTCCCAGAGATGGAGGCTCCTTCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | AGAACAAAGACTGAGAAAAGAAGGAGCCTCCATCTCTaGGAACCTACTGTTGCTATCACAGAATCCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RTKTEKRRSLHL*EPTVAITESLL Trigger: CAACAGGGATTCTGTGATAGCAACAGTAGGTTCCCAGAGATGGAGGCTCCTTCTTTTCTCAGTCTTTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | ATATATTTAGGGAGGAATTGTAGCCTCCCTCAGCTTTaGAGCAGGCTGCCACTGAATATAAGATCACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: IYLGRNCSLPQL*SRLPLNIRSPG Trigger: TCCAGGTGATCTTATATTCAGTGGCAGCCTGCTTCAAAGCTGAGGGAGGCTACAATTCCTCCCTAAATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | ACTAGATGTGATCATGATAAATTACATTTCTCTAGCTaGCCCACTCTACCGTCTCGCCAGCAAAACGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: TRCDHDKLHFSS*PTLPSRQQNAC Trigger: GCATGCGTTTTGCTGGCGAGACGGTAGAGTGGGTCAGCTAGAGAAATGTAATTTATCATGATCACATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | TCCTTCAGCTGGGGGTCAAAAGTCAGAGAACAAGTGTaGCATGAAACTTGCAAACTTTCTAATCAGGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSWGSKVREQV*HETCKLSNQDP Trigger: AGGATCCTGATTAGAAAGTTTGCAAGTTTCATGTCACACTTGTTCTCTGACTTTTGACCCCCAGCTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | TTAGAATCACGTAGATATGACTCTCCATCCTTCATGTaGGTGATCCAGCCCAGTCAGAATCCTGAAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LESRRYDSPSFM*VIQPSQNPERE Trigger: TTCTCTTTCAGGATTCTGACTGGGCTGGATCACTCACATGAAGGATGGAGAGTCATATCTACGTGATTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | GCGGACCATGTTATACAAGTCGTGTTTATCAGAGTATaGGCACACAACAGTTACAAAAGTCCCTTGGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ADHVIQVVFIRV*AHNSYKSPLGD Trigger: ATCTCCCAAGGGACTTTTGTAACTGTTGTGTGCTCATACTCTGATAAACACGACTTGTATAACATGGTCCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| 3UTR GCA 72 bp | ACAACTGGGGATGTAAAGGCAGCTGGACAATTACAGTaGTATTCATTAAATAATATGGGACGTGGATGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TTGDVKAAGQLQ*YSLNNMGRGWV Trigger: GACCCATCCACGTCCCATATTATTTAATGAATAGCACTGTAATTGTCCAGCTGCCTTTACATCCCCAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | TACAGTCTGTATTCCAAGACCCACATGGACTGTAGATaGTCCATCTTCAAAAATACCCATGATGCACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YSLYSKTHMDCR*SIFKNTHDALH Trigger: ATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR GCA 72 bp | AGTCACAGGTTTCAAGTTTTATTTCCTTTCAATGGCTaGCTGAAAGACTGGTTCGTCAAGTGGACACAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SHRFQVLFPFNG*LKDWFVKWTQI Trigger: GATCTGTGTCCACTTGACGAACCAGTCTTTCAGGCAGCCATTGAAAGGAAATAAAACTTGAAACCTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCACTTGTGTACATATGTTaGTGTGCGTATTCATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVQTCAEPVLAASIFVSSLVYIC*CAYSYL Trigger: CAGATATGAATACGCACACAAACATATGTACACAAG...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCAGTGAAAAATCAATGTTaGGAAATGACCCTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVQTCAEPVLAASIFVSSVKNQC*EMTLSN Trigger: ATTGGAGAGGGTCATTTCCAAACATTGATTTTTCAC...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR TCA 72 bp | CCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTaGATATGTTCAAGTCATCCAGTGGCAGTTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSRNTNPKFNHQ*ICSSHPVAVVL Trigger: CAACACAACTGCCACTGGATGACTTGAACATATTCACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR GCA 72 bp | AGTCACAATATATATACAGAACCTGGTGCAAACCTGTaGAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHNIYTEPGANL*RACACCFNFCK Trigger: CTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAGGTTCTGTATATATATTGTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR GCA 72 bp | TCTGTTTCTCTGATCTCTCTTCATTCGCATACTCTCTaGAAGACCTTGATGTATATGGAATATGATGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVSLISLHSHTL*KTLMYMEYDGD Trigger: GTCCCCATCATATTCCATATACATCAAGGTCTTGCAGAGAGTATGCGAATGAAGAGAGATCAGAGAAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | CAAGTTTTATTTCCTTTCAATGGCTGCCTGAAAGACTaGTTCGTCAAGTGGACACAGATCCTGAATCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QVLFPFNGCLKD*FVKWTQILNLL Trigger: TAGAAGATTCAGGATCTGTGTCCACTTGACGAACCAGTCTTTCAGGCAGCCATTGAAAGGAAATAAAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGACAGAGAATCAGAGATCCATTTGTTCACACACTCAAGAGTTCCATAAGTCCAGTGGCAGTTGTGTaGAGTATTTGTGATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RRQRIRDPFVHTLKSSISPVAVV*SICDNG Trigger: GCCATTATCACAAATACTCAACACAACTGCCACTGG...ACTTATGGAACTCTTGAGTGTGTGAACAAATGGATCTCTGATTCTCTGTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTAGCAAGTACAGGTGGCAGAAATTCATTGATATGAAGAAGCATATTGAGGAATCAGAGATCCATTaGTTCACACACTCAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSKYRWQKFIDMKKHIEESEIH*FTHSRV Trigger: AACTCTTGAGTGTGTGAACAAATGGATCTCTGATTC...CTCAATATGCTTCTTCATATCAATGAATTTCTGCCACCTGTACTTGCTAGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | TGTGTAGATGAGAAACCTGCAAAATTTATAGTATGTTaGAGGAGGAGACTATTGTGTGATAGTCATGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVDEKPAKFIVC*RRRLLCDSHVA Trigger: AGCCACATGACTATCACACAATAGTCTCCTCCTCCAACATACTATAAATTTTGCAGGTTTCTCATCTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | AAAATTTTTGCTCTCTGTCTACTATGCAGATACATGTaGTGGTTGGAGCTGCAGTGGCATTGTGAATTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KIFALCLLCRYM*WLELQWHCELK Trigger: TTTTAATTCACAATGCCACTGCAGCTCCAACCATCACATGTATCTGCATAGTAGACAGAGAGCAAAAATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR TCA 72 bp | CCTCTAGCAAGTACAGGTGGCAGAAATTCATTGATATaGAGAAGCATATTGAGTATATATTGTGGCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLASTGGRNSLI*RSILSIYCGFG Trigger: ACCAAAGCCACAATATATACTCAATATGCTTCTTCATATCAATGAATTTCTGCCACCTGTACTTGCTAGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CCA 72 bp | GATACAGCTATAATGTCCAGTAATGGTTTCATTCACTaGCCCAATCTCAAATTCATCCTCTGTTTTATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTAIMSSNGFIH*PNLKFILCFIR Trigger: CCTTATAAAACAGAGGATGAATTTGAGATTGGGCCAGTGAATGAAACCATTACTGGACATTATAGCTGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| 3UTR CCA 72 bp | TTCATTGATATGAAGAAGCATATTGAGTATATATTGTaGCTTTGGTCTGATTTGGGAATAAGGTGTGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: FIDMKKHIEYIL*LWSDLGIRCGM Trigger: CATACCACACCTTATTCCCAAATCAGACCAAAGCCACAATATATACTCAATATGCTTCTTCATATCAATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CAA 72 bp | GTCGCCTACAGGCTGGCTCCAGACACCAAGAATGGATaGGCGGGGGATTGGCCTCCCCTCTTTATAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VAYRLAPDTKNG*AGDWPPLFIST Trigger: TGTGCTTATAAAGAGGGGAGGCCAATCCCCCGCCAATCCATTCTTGGTGTCTGGAGCCAGCCTGTAGGCGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCCAGTCACTCTTGAAGGTCTCCTaGAACTGGGGTCCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLALRRDSAFSCMSTSQSLLKVS*NWGPGF Trigger: GAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAG...TGACTGGGATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | TCAGCGCCATCTTGTAACGGCCTGCCTGGGCATGTCTaGGCCTGTTCTGCTATGTTCTCAGCCCCAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPSCNGLPGHV*ACSAMFSAPGF Trigger: AAAACCTGGGGCTGAGAACATAGCAGAACAGGCCAAGACATGCCCAGGCAGGCCGTTACAAGATGGCGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR TCA 90 bp | CACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSIRPGTEKGLSLQLHEYFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...GTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | TCAAAAATACCCATGATGCACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKIPMMHSIRPGTEKGLSRLPSV*GSDGPA Trigger: AGCTGGACCATCACTCCCTCACACAGAGGGCAGTCG...GCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | TCCATGTGTGTCTCCAGGTGTGCCCAGGCTCAGTGTCTGATGATGGCTGCATATCATCCCAGGTGCACATaGTCAGCTCCAAAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMCVSRCAQAQCLMMAAYHPRCT*SAPKLP Trigger: GGGCAACTTTGGAGCTGATCATGTGCACCTGGGATG...ATATGCAGCCATCATCAGACACTGAGCCTGGGCACACCTGGAGACACACATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR CAA 72 bp | GAGGGAGTGATGGTCCAGCTGGATATACGTCACCTCTaGAAGGTCTCCTGCAACTGGGGTCCAGGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGVMVQLDIRHL*KVSCNWGPGFC Trigger: ACAGAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGACCATCACTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| 3UTR CAA 72 bp | GCTGGCTCCAGACACCAAGAATGGATTGGCGGGGGATaGGCCTCCCCTCTTTATAAGCACAGACTCTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGSRHQEWIGGG*ASPLYKHRLLV Trigger: TACTAAGAGTCTGTGCTTATAAAGAGGGGAGGCCAATCCCCCGCCAATCCATTCTTGGTGTCTGGAGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTGCAGTCCCTGCTTTTTCTaGCGGTGCCTGAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGPSGFFRLFHVCLQVCSPCFF*RCLRKQ Trigger: CTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACT...GCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCCACTAGGGCCTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGCCCTAGTGGATTCTTCAGGCTTTTCCATGTGTGTCTCCAGGTGTGCCCTCTGTGTGAGGGAGTaGTGGTCCAGCTGGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: KKALVDSSGFSMCVSRCALCVRE*WSSWIY Trigger: GTATATCCAGCTGGACCATCACTCCCTCACACAGAG...GGCACACCTGGAGACACACATGGAAAAGCCTGAAGAATCCACTAGGGCCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | AAGACCTTGATGTATATGGAATATGATGGGGACATGGTCCAGTGGCTCAGCTTGCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLMYMEYDGDMVQWLSLRLPSV*GSDGPA Trigger: AGCTGGACCATCACTCCCTCACACAGAGGGCAGTCG...CAAGCTGAGCCACTGGACCATGTCCCCATCATATTCCATATACATCAAGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCCGACTGCCCTCTGTGTaGGGGAGTGATGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPYSLYSKTHMDCRCSIFRLPSV*GSDGPA Trigger: AGCTGGACCATCACTCCCTCACACAGAGGGCAGTCG...GAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTAAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCTGTCATCTGCAACTATGTCTGGAGTCATCTCCAGGCCATTAGTAGCTCATCCCAGGTGCACATaGTCAGCTCCAAAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSSATMSGVISRPLVAHPRCT*SAPKLP Trigger: GGGCAACTTTGGAGCTGATCATGTGCACCTGGGATG...AGCTACTAATGGCCTGGAGATGACTCCAGACATAGTTGCAGATGACAGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000149395.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGGATGGGGAACAGGGACCTAGCTTTCCACACCAGGCTGATCCCAAAAGAGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLDGEQGPSFPHQADPKRVSDDG*ICAGLS Trigger: GCTGAGTCCAGCACATATGCAGCCATCATCAGACAC...TCTTTTGGGATCAGCCTGGTGTGGAAAGCTAGGTCCCTGTTCCCCATCCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGCTCAGTGTCTGATGATGGCTGCATATGTGCTGGACTCAGCCATATCTGATCAGCTCCAAAGTTaGCCAGGGGTACAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQAQCLMMAAYVLDSAISDQLQS*PGVQKE Trigger: TTCCTTCTGTACCCCTGGGCAACTTTGGAGCTGATC...AGATATGGCTGAGTCCAGCACATATGCAGCCATCATCAGACACTGAGCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGAAGGTCTCCTGCAACTaGGGTTGGAGTCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAFHTRLIPKEGPSGFFRKVSCN*GWSHLQ Trigger: CTGGAGATGACTCCAACCCCAGTTGCAGGAGACCTT...CCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAAAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086400.13 |
||
| CDS-3UTR GCA 90 bp | CACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACCTCTCTTCTGGCCTCTaGTGCTGTCTTTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSIRPGTEKGLSLQLHEYLSSGL*CCLLLF Trigger: AAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAG...GTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | CTGATGATGGCTGCATATGTGCTGGACTCAGCCATATCTGTGCTCTGTGAGGTCGATCAGCTCCAAAGTTaGCCAGGGGTACAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMMAAYVLDSAISVLCEVDQLQS*PGVQKE Trigger: TTCCTTCTGTACCCCTGGGCAACTTTGGAGCTGATC...GACCTCACAGAGCACAGATATGGCTGAGTCCAGCACATATGCAGCCATCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| 3UTR CAA 72 bp | ATGGAATATGATGGGGACATGGTCCAGTGGCTCAGCTaGCTCTGTCTGCCCTGTGGTAGAAGGATAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MEYDGDMVQWLS*LCLPCGRRIDS Trigger: AGAGTCTATCCTTCTACCACAGGGCAGACAGAGCAAGCTGAGCCACTGGACCATGTCCCCATCATATTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CAA 72 bp | GTTGGACCTGGGGCAGGAGTCTGGATGACATTTTCTTaGATCACCTTTAGCTCCAGCGTCTTACTACGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGPGAGVWMTFS*ITFSSSVLLRS Trigger: CGAACGTAGTAAGACGCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGGTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPYSLYSKTHMDCRCSIFFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...GAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | CTCACAAAAACCATCTGCCTCTGTCTCCTAAGTAGCAGGATTAAAGGTGTGTGCCTCTGTGTGAGGGAGTaGTGGTCCAGCTGGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LTKTICLCLLSSRIKGVCLCVRE*WSSWIY Trigger: GTATATCCAGCTGGACCATCACTCCCTCACACAGAG...GCACACACCTTTAATCCTGCTACTTAGGAGACAGAGGCAGATGGTTTTTGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCACTCTTGAAGGTCTCCTaGAACTGGGGTCCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVQTCAEPVLAASIFVSSLLKVS*NWGPGF Trigger: GAAACCTGGACCCCAGTTGCAGGAGACCTTCAAGAG...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTTCCACACCAGGCTGATCCCAAAAGAAGGCCCTAGTGGATTCTTCAGGATCTGCAACTATGTCTaGAGTCATCTCCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LAFHTRLIPKEGPSGFFRICNYV*SHLQAI Trigger: AATGGCCTGGAGATGACTCCAGACATAGTTGCAGAT...CCTGAAGAATCCACTAGGGCCTTCTTTTGGGATCAGCCTGGTGTGGAAAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | GAAATGACCCTCTCCAATACCTCTACCAAACTCCCTTaGGGTCCTACCGTTGTAGGATTTGTCTCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMTLSNTSTKLP*GPTVVGFVSCW Trigger: CCAGCATGAGACAAATCCTACAACGGTAGGACCCAAAGGGAGTTTGGTAGAGGTATTGGAGAGGGTCATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | ATGGATATTTTCACCGACCTCTGTCTTCAGCTATTGTaGCACACTGATGTCCCCATCTTCAGCTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MDIFTDLCLQLL*HTDVPIFSYLG Trigger: GCCCAGGTAGCTGAAGATGGGGACATCAGTGTGCAACAATAGCTGAAGACAGAGGTCGGTGAAAATATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR GCA 90 bp | ACCATCTGCCTCTGTCTCCTAAGTAGCAGGATTAAAGGTGTGTGCCACCATGTCAGGAAGCCTGTCATCTaGAACTATGTCTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TICLCLLSSRIKGVCHHVRKPVI*NYVWSH Trigger: ATGACTCCAGACATAGTTGCAGATGACAGGCTTCCT...GACATGGTGGCACACACCTTTAATCCTGCTACTTAGGAGACAGAGGCAGATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGGCGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVDAPSSKIPMMHSIRPGVSDDG*ICAGLS Trigger: GCTGAGTCCAGCACATATGCAGCCATCATCAGACAC...GCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCCTCTTGAAGGTCTCCTaGAACTGGGGTTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPYSLYSKTHMDCRCSIFLLKVS*NWGWSH Trigger: ATGACTCCAACCCCAGTTGCAGGAGACCTTCAAGAG...GAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTAAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086400.13 |
||
| CDS-3UTR TCA 90 bp | GATGGGTCTGAAGAAACAGCTAAAAGAGCTATAACTGTGTCTCTGGAAATAGCTAGTCCCTGCTTTTTCTaGCGGTGCCTGAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGSEETAKRAITVSLEIASPCFF*RCLRKQ Trigger: CTGCTTCCTCAGGCACCGTCAGAAAAAGCAGGGACT...AGCTATTTCCAGAGACACAGTTATAGCTCTTTTAGCTGTTTCTTCAGACCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR TCA 90 bp | GTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGGACCTACATCCCAGGTGCACATaGTCAGCTCCAAAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VMILTHIQFIIWMGNRDLHPRCT*SAPKLP Trigger: GGGCAACTTTGGAGCTGATCATGTGCACCTGGGATG...TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGGCCCTGGGGCAGGAGTCTaGATGACATTTTCTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TVDAPSSKIPMMHSIRPGPGAGV*MTFSLI Trigger: GATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGG...GCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | TTTCTGCCTCCCATTCTGGAAATGGGTTACATCTATTaGATGTGTTGGCCATGGGAACCCCCAAACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPPILEMGYIY*MCWPWEPPNHQ Trigger: TTGGTGGTTTGGGGGTTCCCATGGCCAACACATCAAATAGATGTAACCCATTTCCAGAATGGGAGGCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 |
||
| CDS-3UTR TCA 90 bp | GTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGGACCTACTCTGTGTGAGGGAGTaGTGGTCCAGCTGGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: VMILTHIQFIIWMGNRDLLCVRE*WSSWIY Trigger: GTATATCCAGCTGGACCATCACTCCCTCACACAGAG...TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCAAACCTGTGCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCACTCTCTTCTGGCCTCTaGTGCTGTCTTTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVQTCAEPVLAASIFVSSLSSGL*CCLLLF Trigger: AAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAG...TGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGCACAGGTTTGCACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | ACTATGGATATTTTCACCGACCTCTGTCTTCAGCTATaGTTGCACACTGATGTCCCCATCTTCAGCTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMDIFTDLCLQL*LHTDVPIFSYL Trigger: CAGGTAGCTGAAGATGGGGACATCAGTGTGCAACAATAGCTGAAGACAGAGGTCGGTGAAAATATCCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR TCA 90 bp | ATCCTGATCAACACATACCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTTTTTCTGACGGTGCCTaGGGAAGCAGAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILINTYHQETPTQSSIISFSDGA*GSRTEG Trigger: CCCTTCTGTTCTGCTTCCTCAGGCACCGTCAGAAAA...ACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGGTATGTGTTGATCAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | TCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCTCTTCTGGCCTCTaGTGCTGTCTTTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKTHMDCRCSIFKNTHDALSSGL*CCLLLF Trigger: AAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAG...TGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CCA 90 bp | GTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGGACCTATGGCTGCATATGTGCTaGACTCAGCCATATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMILTHIQFIIWMGNRDLWLHMC*TQPYLC Trigger: GCACAGATATGGCTGAGTCCAGCACATATGCAGCCA...TAGGTCCCTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | CTGATCTCTCTTCATTCGCATACTCTCTGCAAGACCTaGATGTATATGGAATATGATGGGGACATGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSHTLCKT*MYMEYDGDMVQ Trigger: CTGGACCATGTCCCCATCATATTCCATATACATCAAGGTCTTGCAGAGAGTATGCGAATGAAGAGAGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CAA 72 bp | TCAGCCTCCATTTCCAGAGAATTTACAGCCTTTCTGTaGATTCTCAGAGTCACCTCTCCTACACTGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SASISREFTAFL*ILRVTSPTLKG Trigger: ACCTTTCAGTGTAGGAGAGGTGACTCTGAGAATCAACAGAAAGGCTGTAAATTCTCTGGAAATGGAGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR GCA 90 bp | AGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATACCAGGAAGCCTGTCATCTaGAACTATGTCTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYSKTHMDCRCSIFKNTRKPVI*NYVWSH Trigger: ATGACTCCAGACATAGTTGCAGATGACAGGCTTCCT...GGTATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | ATCCTGATCAACACATACCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTACTCAGCCATATCTGTaGTCTGTGAGGTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILINTYHQETPTQSSIISTQPYL*SVRSQL Trigger: GAGCTGTGACCTCACAGAGCACAGATATGGCTGAGT...ACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGGTATGTGTTGATCAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | CTGATCAACACATACCATCAAGAAACACCAACCCAAAGTTCAATCATCAGTGAAACTCAGCCATATCTGTaGTCTGTGAGGTCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LINTYHQETPTQSSIISETQPYL*SVRSQL Trigger: GAGCTGTGACCTCACAGAGCACAGATATGGCTGAGT...TTCACTGATGATTGAACTTTGGGTTGGTGTTTCTTGATGGTATGTGTTGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGACAGAGAATCAGAGATCCATTTGTTCACACACTCAAGAGTTCCATAAGTTGGCTGCATATGTGCTaGACTCAGCCATATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRIRDPFVHTLKSSISWLHMC*TQPYLC Trigger: GCACAGATATGGCTGAGTCCAGCACATATGCAGCCA...ACTTATGGAACTCTTGAGTGTGTGAACAAATGGATCTCTGATTCTCTGTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | CTGAAAGGTCAGAGTCTAAGCTTGTTCATTGCTAATTaGCAACTGAATAGAGTACCTGGACTTCCCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKGQSLSLFIAN*QLNRVPGLPGR Trigger: TCTTCCGGGAAGTCCAGGTACTCTATTCAGTTGCAAATTAGCAATGAACAAGCTTAGACTCTGACCTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCCTGTGCTTGCTGCTTCAATTTTTGTAAGTTCATATGAGTATTTTTCTGTGTCTGATGATGGCTaGATATGTGCTGGACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AEPVLAASIFVSSYEYFSVSDDG*ICAGLS Trigger: GCTGAGTCCAGCACATATGCAGCCATCATCAGACAC...AGAAAAATACTCATATGAACTTACAAAAATTGAAGCAGCAAGCACAGGCTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAGTGATGATACTAACACATATACAATTCATCATCTGGATGGGGAACAGGATCAGCTCCAAAGTTaGCCAGGGGTACAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSDDTNTYTIHHLDGEQDQLQS*PGVQKE Trigger: TTCCTTCTGTACCCCTGGGCAACTTTGGAGCTGATC...CTGTTCCCCATCCAGATGATGAATTGTATATGTGTTAGTATCATCACTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTCTGTATTCCAAGACCCACATGGACTGTAGATGCTCCATCTTCAAAAATATCTGCAACTATGTCTaGAGTCATCTCCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YSLYSKTHMDCRCSIFKNICNYV*SHLQAI Trigger: AATGGCCTGGAGATGACTCCAGACATAGTTGCAGAT...ATTTTTGAAGATGGAGCATCTACAGTCCATGTGGGTCTTGGAATACAGACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068865.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CCA 90 bp | ATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACATTGGCTGCATATGTGCTaGACTCAGCCATATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITMKTEFESLQSVFQDPHWLHMC*TQPYLC Trigger: GCACAGATATGGCTGAGTCCAGCACATATGCAGCCA...ATGTGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| 3UTR CAA 72 bp | CTTTATAAGCACAGACTCTTAGTAAACTTTGGGGTCTaGATCAGAGAAAAATTTGTCTTAGCCTCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKHRLLVNFGV*IREKFVLASFF Trigger: AAAGAATGAGGCTAAGACAAATTTTTCTCTGATCAAGACCCCAAAGTTTACTAAGAGTCTGTGCTTATAAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| 3UTR CAA 72 bp | CTAATAGGAGAGGCCTTAATTTCAGATCCTGTTGCTTaGACTAGATGTGATCATGATAAATTACATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGEALISDPVA*TRCDHDKLHFS Trigger: AGAGAAATGTAATTTATCATGATCACATCTAGTCAAAGCAACAGGATCTGAAATTAAGGCCTCTCCTATTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTCCTGGACCTGCACGAAGTTCAAGGACGTCAGGTTCTCAGAGGTGGGCCTCTGCTGCTGTCTTTaGTTGTTTGGGAGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSWTCTKFKDVRFSEVGLCCCL*LFGSPC Trigger: GCAGGGACTCCCAAACAACAAAAGACAGCAGCAGAG...GCCCACCTCTGAGAACCTGACGTCCTTGAACTTCGTGCAGGTCCAGGAACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068865.13 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGCACTGAGAAGGGACTCAGCCTTCAGCTGCATGAGTACATCCCAGTCACTCTGCTGCTGTCTTTaGTTGTTTGGGAGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLALRRDSAFSCMSTSQSLCCCL*LFGSPC Trigger: GCAGGGACTCCCAAACAACAAAAGACAGCAGCAGAG...TGACTGGGATGTACTCATGCAGCTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS GCA 90 bp | TCCAGGCCATTAGTAGCTAGATTTAGCCTCTCTTCTGGCCTCTGCTaGTGTCTTTTGTTGTTTGGGAGTCCTGAGGTTGGACCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRPLVARFSLSSGLC*CLLLFGSPEVGPGA Trigger: TGCCCCAGGTCCAACCTCAGGACTCCCAAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAGGCTAAATCTAGCTACTAATGGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108600.9 |
||
| CDS TCA 90 bp | ACAGGAAATATTCAAGGGTCTCCTTCCAGGCATCCCAGGTGCACATaGTCAGCTCCAAAGTTGCCCAGGGGTACAGAAGGAACCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGNIQGSPSRHPRCT*SAPKLPRGTEGTKD Trigger: GTCTTTGGTTCCTTCTGTACCCCTGGGCAACTTTGGAGCTGATCATGTGCACCTGGGATGCCTGGAAGGAGACCCTTGAATATTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGATGCTCCATCTTCAAAAATACCCATGATGCACTCCATAAGGCCTGGCCTCCTGCAACTGGGGTaGGAGTCATCTCCAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TVDAPSSKIPMMHSIRPGLLQLG*ESSPGH Trigger: ATGGCCTGGAGATGACTCCAACCCCAGTTGCAGGAG...GCCAGGCCTTATGGAGTGCATCATGGGTATTTTTGAAGATGGAGCATCTACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086400.13 |
||
| CDS-3UTR CAA 90 bp | TTTAGGGTTCACTGGGCTCATTACACAACTGGGGATGTAAAGGCAGCTGGACAACTCTGCTGCTGTCTTTaGTTGTTTGGGAGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRVHWAHYTTGDVKAAGQLCCCL*LFGSPC Trigger: GCAGGGACTCCCAAACAACAAAAGACAGCAGCAGAG...TTGTCCAGCTGCCTTTACATCCCCAGTTGTGTAATGAGCCCAGTGAACCCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068865.13 ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CAA 90 bp | ATACCCATGATGCACTCCATAAGGCCTGGCACTGAGAAGGGACTCAGCCTTCAGTGGATGACATTTTCTTaGATCACCTTTAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPMMHSIRPGTEKGLSLQWMTFS*ITFSSS Trigger: GCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCA...CTGAAGGCTGAGTCCCTTCTCAGTGCCAGGCCTTATGGAGTGCATCATGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS GCA 90 bp | TCCAGGCCATTAGTAGCTAGATTTAGCCTCTCTTCTGGCCTCTGCTaGTGTCTTTTGTTGTTTGGGAGTCCCTCCTGTGTGTTAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPLVARFSLSSGLC*CLLLFGSPSCVLIF Trigger: GAAAATTAACACACAGGAGGGACTCCCAAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAGGCTAAATCTAGCTACTAATGGCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205296.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGGGTTCACTGGGCTCATTACACAACTGGGGATGTAAAGGCAGCTGGACAATGGATGACATTTTCTTaGATCACCTTTAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRVHWAHYTTGDVKAAGQWMTFS*ITFSSS Trigger: GCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCA...TTGTCCAGCTGCCTTTACATCCCCAGTTGTGTAATGAGCCCAGTGAACCCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CAA 90 bp | AAGAAGACAGAGAATCAGAGATCCATTTGTTCACACACTCAAGAGTTCCATAAGAAGATGTATCTGAGGTaGGACCTGGGGCAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKTENQRSICSHTQEFHKKMYLR*DLGQES Trigger: AGACTCCTGCCCCAGGTCCAACCTCAGATACATCTT...CTTATGGAACTCTTGAGTGTGTGAACAAATGGATCTCTGATTCTCTGTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS-3UTR CAA 90 bp | ATAACAATGAAAACAGAGTTTGAGTCCTTACAGTCTGTATTCCAAGACCCACATAAGATGTATCTGAGGTaGGACCTGGGGCAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ITMKTEFESLQSVFQDPHKMYLR*DLGQES Trigger: AGACTCCTGCCCCAGGTCCAACCTCAGATACATCTT...ATGTGGGTCTTGGAATACAGACTGTAAGGACTCAAACTCTGTTTTCATTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086400.13 ENSMUST00000086401.10 |
||
| CDS TCA 72 bp | TGGCCTCTGCTGCTGTCTTTTGTTGTTTGGGAGTCCTaGGGTTGGACCTGGGGCAGGAGTCTGGATGACATT | + |
|
Preference number: 6 (lower is better) Translates to: WPLLLSFVVWES*GWTWGRSLDDI Trigger: AATGTCATCCAGACTCCTGCCCCAGGTCCAACCTCAGGACTCCCAAACAACAAAAGACAGCAGCAGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108600.9 |
||
| CDS TCA 72 bp | ATTCAAGGGTCTCCTTCCAGGCATCCCAGGTGCACATaGTCAGCTCCAAAGTTGCCCAGGGGTACAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IQGSPSRHPRCT*SAPKLPRGTEG Trigger: TCCTTCTGTACCCCTGGGCAACTTTGGAGCTGATCATGTGCACCTGGGATGCCTGGAAGGAGACCCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131126.3 ENSMUST00000136616.8 ENSMUST00000149395.8 |
||
| CDS CAA 72 bp | GAGGGAGTGATGGTCCAGCTGGATATACGTCACCTCTaGAAGGTCTCCTGCAACTGGGGTTGGAGTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGVMVQLDIRHL*KVSCNWGWSHL Trigger: GAGATGACTCCAACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGACCATCACTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086400.13 |
||
| CDS GCA 72 bp | GTCCAGCTGGATATACGTCACCTCTTGAAGGTCTCCTaGAACTGGGGTTGGAGTCATCTCCAGGCCATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VQLDIRHLLKVS*NWGWSHLQAIS Trigger: ACTAATGGCCTGGAGATGACTCCAACCCCAGTTGCAGGAGACCTTCAAGAGGTGACGTATATCCAGCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086400.13 |
||
| CDS CAA 90 bp | AGTCCTGAGGTTGGACCTGGGGCAGGAGTCTGGATGACATTTTCTTaGATCACCTTTAGCTCCAGCGTCTTACTACGTTCGGACCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SPEVGPGAGVWMTFS*ITFSSSVLLRSDQV Trigger: TACCTGGTCCGAACGTAGTAAGACGCTGGAGCTAAAGGTGATCAAAGAAAATGTCATCCAGACTCCTGCCCCAGGTCCAACCTCAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108600.9 |
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| CDS GCA 72 bp | TTAGTAGCTAGATTTAGCCTCTCTTCTGGCCTCTGCTaGTGTCTTTTGTTGTTTGGGAGTCCCTCCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LVARFSLSSGLC*CLLLFGSPSCV Trigger: CACACAGGAGGGACTCCCAAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAGGCTAAATCTAGCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205296.2 |
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| CDS CAA 90 bp | TTAGTAGCTAGATTTAGCCTCTCTTCTGGCCTCTGCTGCTGTCTTTaGTTGTTTGGGAGTCCCTCCTGTGTGTTAATTTTCCATCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVARFSLSSGLCCCL*LFGSPSCVLIFHPR Trigger: CCTGGGATGGAAAATTAACACACAGGAGGGACTCCCAAACAACAAAAGACAGCAGCAGAGGCCAGAAGAGAGGCTAAATCTAGCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205296.2 |
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