Pregenerated sensors for LAGE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015289Ensembl transcript IDs: ENSMUST00000015433.4, ENSMUST00000114152.2, ENSMUST00000114153.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATCACTCTAGTGTGATGATGTCTCTGAGGAAGTGCAGCCTAGGGTaGAGGATGGCCCAGACACCTACCCAGCATCCTAGACTCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: NHSSVMMSLRKCSLG*RMAQTPTQHPRLFQ Trigger: TTGAAAGAGTCTAGGATGCTGGGTAGGTGTCTGGGCCATCCTCCACCCTAGGCTGCACTTCCTCAGAGACATCATCACACTAGAGTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTCTTCCAAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAAGTAATCAGACCATCTaGCTTTCTCTTGGCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: PLFQRSRVQIPATTWWLTSNQTI*LSLGSY Trigger: GTAGGAGCCAAGAGAAAGGCAGATGGTCTGATTACT...TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGGGACCTTTGGAAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCACTGACCACTCTTCCAAAGGTCCCGAGTTCAAATCCCAGCAACCACACTCGTAATGAGATCTaGCACCCTCTTCTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LRALTTLPKVPSSNPSNHTRNEI*HPLLVC Trigger: ACACACCAGAAGAGGGTGTCAGATCTCATTACGAGT...GTGGTTGCTGGGATTTGAACTCGGGACCTTTGGAAGAGTGGTCAGTGCTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCAAATCAATGTCTCTGAGGAAGTaGAGCCTAGGGTGGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TNIEAPDQMAPKCLRTKSMSLRK*SLGWRM Trigger: CATCCTCCACCCTAGGCTGCACTTCCTCAGAGACAT...TGATTTGGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCATATGTGCAAACACTCTCCAAGGTCAGAGGACAACTTGTAGGAGTTGGTGCCTGGTCTACAGAGTaGGTTCCAGGACAGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: YAYVQTLSKVRGQLVGVGAWSTE*VPGQTR Trigger: TCTTGTCTGTCCTGGAACTCACTCTGTAGACCAGGC...ACCAACTCCTACAAGTTGTCCTCTGACCTTGGAGAGTGTTTGCACATATGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGCAAATGGCTCCTAAGTaGCTGAGGACCAAATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSSATNIEAPDQMAPKCLQMAPK*LRTKSG Trigger: TCCTGATTTGGTCCTCAGGCACTTAGGAGCCATTTG...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCTCCTACCCTTTCTTCATCTGTCAGGCATCCACTGTACTGCAGGTAGATGGTCCAGTGCATCATaGCTTTCCTTAAAAATCACT | + |
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Preference number: 2 (lower is better) Translates to: SWLLPFLHLSGIHCTAGRWSSAS*LSLKIT Trigger: AGTGATTTTTAAGGAAAGGCATGATGCACTGGACCA...TCTACCTGCAGTACAGTGGATGCCTGACAGATGAAGAAAGGGTAGGAGCCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCGGTTGGCTTAGGGATTaGTATGTGGATCTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LFSSATNIEAPDQMAPKCGWLRD*YVDLAG Trigger: GCCAGCCAGATCCACATAGCAATCCCTAAGCCAACC...GCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTGTTTGTGGTATGCATATGTGCAAACACTCTCCAAGGTCAGAGGACAAATTGCTATGTGGATCTaGCTGGCCTGGAACTCACAG | + |
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Preference number: 2 (lower is better) Translates to: IWCLWYAYVQTLSKVRGQIAMWI*LAWNSQ Trigger: CTGTGAGTTCCAGGCCAGCCAGATCCACATAGCAAT...TTGTCCTCTGACCTTGGAGAGTGTTTGCACATATGCATACCACAAACACCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGTTCAGCAACAAACATTaGAGCACCAGACCAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: FSSATNIEAPDQMAPKCLFSNKH*STRPNG Trigger: GCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAA...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCAAATGGCTCCTAAGTaGCTGAGGACCAAATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFSSATNIEAPDQMAPKCQMAPK*LRTKSG Trigger: TCCTGATTTGGTCCTCAGGCACTTAGGAGCCATTTG...GCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCTTCAGCAACAAACATTaGAGCACCAGACCAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LFSSATNIEAPDQMAPKCFSNKH*STRPNG Trigger: GCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAA...GCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCATATGTGCAAACACTCTCCAAGGTCAGAGGACAACTTGTAGGAGTTGGTTACAGTACTGGGAATTaGACCAAAGACTTCATACAT | + |
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Preference number: 2 (lower is better) Translates to: YAYVQTLSKVRGQLVGVGYSTGN*TKDFIH Trigger: ATGTATGAAGTCTTTGGTTCAATTCCCAGTACTGTA...ACCAACTCCTACAAGTTGTCCTCTGACCTTGGAGAGTGTTTGCACATATGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTGTTTGTGGTATGCATATGTGCAAACACTCTCCAAGGTCAGAGGACAAAACCACCATAGCGCATaGAATTTTAATTTTCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: IWCLWYAYVQTLSKVRGQNHHSA*NFNFPV Trigger: TACAGGAAAATTAAAATTCCATGCGCTATGGTGGTT...TTGTCCTCTGACCTTGGAGAGTGTTTGCACATATGCATACCACAAACACCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR CCA 72 bp | AGTGTGATGATGTCTCTGAGGAAGTGCAGCCTAGGGTaGAGGATGGCCCAGACACCTACCCAGCATCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: SVMMSLRKCSLG*RMAQTPTQHPR Trigger: TCTAGGATGCTGGGTAGGTGTCTGGGCCATCCTCCACCCTAGGCTGCACTTCCTCAGAGACATCATCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCAGCTGGTCAAGAAAGTaGATGATGGAAAGTCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SATNIEAPDQMAPKCLRTSWSRK*MMESRR Trigger: CCTCCGACTTTCCATCATCAACTTTCTTGACCAGCT...GGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGCCATCTGCCTTTCTCTaGGCTCCTACCCTTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: FSSATNIEAPDQMAPKCLPSAFL*APTLSS Trigger: TGAAGAAAGGGTAGGAGCCAAGAGAAAGGCAGATGG...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | GGAGATAAGGTCAGACATGGGTCCCCAGCCAGGCTTAACAGGAAACTGGGGGCCTCCACTGGGAATAACTaGCTTTGTGCCTGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: GDKVRHGSPARLNRKLGASTGNN*LCACIT Trigger: GGTAATGCAGGCACAAAGGCAGTTATTCCCAGTGGA...GGCCCCCAGTTTCCTGTTAAGCCTGGCTGGGGACCCATGTCTGACCTTATCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | TCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCCCCACAGGCGATTTCTaGCTCCAAAGAGGTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SATNIEAPDQMAPKCLRTPTGDF*LQRGRE Trigger: TTCCCGACCTCTTTGGAGGCAGAAATCGCCTGTGGG...GGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | ACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCAAATCACCCACAGGCGATTTCTaGCTCCAAAGAGGTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TNIEAPDQMAPKCLRTKSPTGDF*LQRGRE Trigger: TTCCCGACCTCTTTGGAGGCAGAAATCGCCTGTGGG...TGATTTGGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGGCGCCATCTGCAGTGTaGCTTAAACCTGTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSATNIEAPDQMAPKCLRAPSAV*LKPVCA Trigger: AGCACACACAGGTTTAAGCCACACTGCAGATGGCGC...CCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGCGGGTTCCAGGCCTTTaGGTTAAAGGCACCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSATNIEAPDQMAPKCLRRVPGL*VKGTML Trigger: AAGCATGGTGCCTTTAACCCAAAGGCCTGGAACCCG...CCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | TCTTGGCTCCTACCCTTTCTTCATCTGTCAGGCATCCACTGTACTGCAGGTAGATCCACTGGGAATAACTaGCTTTGTGCCTGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: SWLLPFLHLSGIHCTAGRSTGNN*LCACIT Trigger: GGTAATGCAGGCACAAAGGCAGTTATTCCCAGTGGA...TCTACCTGCAGTACAGTGGATGCCTGACAGATGAAGAAAGGGTAGGAGCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | TCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCGGGTTAAAGGCACCATaGTTTTGCTGGAATTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SATNIEAPDQMAPKCLRTGLKAP*FCWNFG Trigger: CCCGAAATTCCAGCAAAAGCATGGTGCCTTTAACCC...GGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGCCCACAGGCGATTTCTaGCTCCAAAGAGGTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FSSATNIEAPDQMAPKCLPTGDF*LQRGRE Trigger: TTCCCGACCTCTTTGGAGGCAGAAATCGCCTGTGGG...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | ACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGACCAAATCAGGGTTAAAGGCACCATaGTTTTGCTGGAATTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: TNIEAPDQMAPKCLRTKSGLKAP*FCWNFG Trigger: CCCGAAATTCCAGCAAAAGCATGGTGCCTTTAACCC...TGATTTGGTCCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGGCACCATGCTTTTGCTaGAATTTCGGGAGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSSATNIEAPDQMAPKCLAPCFC*NFGRLP Trigger: TGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGC...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR GCA 90 bp | TTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGTCCACTGGGAATAACTaGCTTTGTGCCTGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: FSSATNIEAPDQMAPKCLSTGNN*LCACIT Trigger: GGTAATGCAGGCACAAAGGCAGTTATTCCCAGTGGA...CAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CCA 90 bp | TTATTTTCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCGCGCCATCTGCAGTGTaGCTTAAACCTGTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFSSATNIEAPDQMAPKCAPSAV*LKPVCA Trigger: AGCACACACAGGTTTAAGCCACACTGCAGATGGCGC...GCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CCA 90 bp | TTAGGCCCCCACATTTATGTAGTAGTTACTATTTCTAGAATCTTTTCCCTAGGGGCACCATGCTTTTGCTaGAATTTCGGGAGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGPHIYVVVTISRIFSLGAPCFC*NFGRLP Trigger: TGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGC...CCCTAGGGAAAAGATTCTAGAAATAGTAACTACTACATAAATGTGGGGGCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 90 bp | AGGCACCATGCTTTTGCTGGAATTTCGGGAGGCTTCCAGTGCTCTTaGAACAGGGTGAGCTCCACTGGGAATAACTGCCTTTGTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RHHAFAGISGGFQCS*NRVSSTGNNCLCAC Trigger: GCAGGCACAAAGGCAGTTATTCCCAGTGGAGCTCACCCTGTTGCAAGAGCACTGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAGCAACAAACATTGAAGCACCAGACCAAATGGCTCCTAAGTGCCTGAGGAGCTGGTCAAGAAAGTaGATGATGGAAAGTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SSATNIEAPDQMAPKCLRSWSRK*MMESRR Trigger: CCTCCGACTTTCCATCATCAACTTTCTTGACCAGCT...CCTCAGGCACTTAGGAGCCATTTGGTCTGGTGCTTCAATGTTTGTTGCTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015433.4 |
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| CDS TCA 72 bp | TTTGTGCCTGCATTACCAGGACAACAGCGGCTAGTCTaGCCATCGGCGCCATCTGCAGTGTGGCTTAAACCT | + |
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Preference number: 6 (lower is better) Translates to: FVPALPGQQRLV*PSAPSAVWLKP Trigger: AGGTTTAAGCCACACTGCAGATGGCGCCGATGGTCAGACTAGCCGCTGTTGTCCTGGTAATGCAGGCACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS TCA 72 bp | AAAGAGGTCGGGAAAGGCACGAAGAGGGAGAATCTGTaGTGTCGGGTTCCAGGCCTTTGGGTTAAAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: KEVGKGTKRENL*CRVPGLWVKGT Trigger: GGTGCCTTTAACCCAAAGGCCTGGAACCCGACATCACAGATTCTCCCTCTTCGTGCCTTTCCCGACCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 72 bp | AGGGTGAGCTCCACTGGGAATAACTGCCTTTGTGCCTaGATTACCAGGACAACAGCGGCTAGTCTGACCATC | + |
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Preference number: 6 (lower is better) Translates to: RVSSTGNNCLCA*ITRTTAASLTI Trigger: GATGGTCAGACTAGCCGCTGTTGTCCTGGTAATGCAGGCACAAAGGCAGTTATTCCCAGTGGAGCTCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 72 bp | TGCTCTTGCAACAGGGTGAGCTCCACTGGGAATAACTaGCTTTGTGCCTGCATTACCAGGACAACAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: CSCNRVSSTGNN*LCACITRTTAA Trigger: AGCCGCTGTTGTCCTGGTAATGCAGGCACAAAGGCAGTTATTCCCAGTGGAGCTCACCCTGTTGCAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 72 bp | GATGTCGGGTTCCAGGCCTTTGGGTTAAAGGCACCATaGTTTTGCTGGAATTTCGGGAGGCTTCCAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DVGFQAFGLKAP*FCWNFGRLPVL Trigger: GAGCACTGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGCCTTTAACCCAAAGGCCTGGAACCCGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 72 bp | GCTTTTGCTGGAATTTCGGGAGGCTTCCAGTGCTCTTaGAACAGGGTGAGCTCCACTGGGAATAACTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AFAGISGGFQCS*NRVSSTGNNCL Trigger: AAGGCAGTTATTCCCAGTGGAGCTCACCCTGTTGCAAGAGCACTGGAAGCCTCCCGAAATTCCAGCAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS GCA 72 bp | GGGTTCCAGGCCTTTGGGTTAAAGGCACCATGCTTTTaGTGGAATTTCGGGAGGCTTCCAGTGCTCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GFQAFGLKAPCF*WNFGRLPVLLQ Trigger: TTGCAAGAGCACTGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGCCTTTAACCCAAAGGCCTGGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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| CDS CCA 72 bp | TTCCAGGCCTTTGGGTTAAAGGCACCATGCTTTTGCTaGAATTTCGGGAGGCTTCCAGTGCTCTTGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: FQAFGLKAPCFC*NFGRLPVLLQQ Trigger: CTGTTGCAAGAGCACTGGAAGCCTCCCGAAATTCCAGCAAAAGCATGGTGCCTTTAACCCAAAGGCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015433.4 ENSMUST00000114152.2 ENSMUST00000114153.2 |
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