Pregenerated sensors for LAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041782Ensembl transcript IDs: ENSMUST00000038760.10
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGAGTaGGGTCTGCAAGAGTCAAGGGTTCTGCAGGAGAGGGGCCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: APEDPDQTDPEAGRE*GLQESRVLQERGRH Trigger: ATGCCGGCCCCTCTCCTGCAGAACCCTTGACTCTTGCAGACCCCACTCCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR GCA 90 bp | ATCCAGAGGCGGGAAGGGAGTGGGGTCTGCAAGAGTCAAGGGTTCTaGAGGAGAGGGGCCGGCATGATGAAGGGCCCTTGGGATGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: IQRREGSGVCKSQGF*RRGAGMMKGPWDAG Trigger: ACCTGCATCCCAAGGGCCCTTCATCATGCCGGCCCCTCTCCTGCAGAACCCTTGACTCTTGCAGACCCCACTCCCTTCCCGCCTCTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CCA 90 bp | AGAGAACACCTGCCCACAGTCTGGGCTGGAGACGGGCTGAAGGCGTaGCAGTCATGTTCCTGGCCCCTGAGGACCCTGACCAGACTGATC | + |
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Preference number: 1 (lower is better) Translates to: REHLPTVWAGDGLKA*QSCSWPLRTLTRLI Trigger: GATCAGTCTGGTCAGGGTCCTCAGGGGCCAGGAACATGACTGCCACGCCTTCAGCCCGTCTCCAGCCCAGACTGTGGGCAGGTGTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CCA 90 bp | CCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCCACAGTCTaGGCTGGAGACGGGCTGAAGGCGTGGCAGTCATGTTCCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PSAGQESSREHLPTV*AGDGLKAWQSCSWP Trigger: GGGCCAGGAACATGACTGCCACGCCTTCAGCCCGTCTCCAGCCCAGACTGTGGGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CCA 90 bp | TTCCCGATCAGGGCAGCAGGAGGGTGGGGAACACAGTGCAAGCAGTaGGGTGTAGCACATAGGCAGCCTGGCGACTCCTTTCCAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: FPIRAAGGWGTQCKQ*GVAHRQPGDSFPVW Trigger: CCAGACTGGAAAGGAGTCGCCAGGCTGCCTATGTGCTACACCCCACTGCTTGCACTGTGTTCCCCACCCTCCTGCTGCCCTGATCGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR GCA 90 bp | CATGGACACTCCATGGCTGACGGGCCAGGGCTGTGCTCTGGCACTTTCCGGGTTGTTCCAGAGAACACCTaGCCACAGTCTGGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGHSMADGPGLCSGTFRVVPENT*PQSGLE Trigger: CTCCAGCCCAGACTGTGGGCAGGTGTTCTCTGGAAC...AACCCGGAAAGTGCCAGAGCACAGCCCTGGCCCGTCAGCCATGGAGTGTCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CAA 90 bp | GACGGGCCAGGGCTGTGCTCTGGCACTTTCCGGGTTCAGGATACATaGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DGPGLCSGTFRVQDT*YLQRDKKVPENTCP Trigger: TGGGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGAGCACAGCCCTGGCCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR CCA 90 bp | CACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAGGCGGGAAGGGAGTaGGGTCTGCAAGAGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: HFPGSGYIVPSAGQESSREAGRE*GLQESR Trigger: CCTTGACTCTTGCAGACCCCACTCCCTTCCCGCCTC...TCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTGAAGGGCCCTTGGGATaGAGGTTTTCAGGTCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVEGPLG*RFSGPS Trigger: GGACGGACCTGAAAACCTGCATCCCAAGGGCCCTTC...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGGAAAGGTTTTTCTGGCTGAGAGTAAGGCATGTGGTAAGACGAAAAGGGACATGGACACTCCATaGCTGACGGGCCAGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FLGKVFLAESKACGKTKRDMDTP*LTGQGC Trigger: ACAGCCCTGGCCCGTCAGCCATGGAGTGTCCATGTC...CCTTTTCGTCTTACCACATGCCTTACTCTCAGCCAGAAAAACCTTTCCCAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGGAAAGGTTTTTCTGGCTGAGAGTAAGGCATGTGGTAAGACGAAAAGGGAAGGGAGTGGGGTCTaGAAGAGTCAAGGGTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FLGKVFLAESKACGKTKREGSGV*KSQGFC Trigger: GCAGAACCCTTGACTCTTGCAGACCCCACTCCCTTC...CCTTTTCGTCTTACCACATGCCTTACTCTCAGCCAGAAAAACCTTTCCCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR GCA 72 bp | CGGGAAGGGAGTGGGGTCTGCAAGAGTCAAGGGTTCTaGAGGAGAGGGGCCGGCATGATGAAGGGCCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: REGSGVCKSQGF*RRGAGMMKGPW Trigger: CCAAGGGCCCTTCATCATGCCGGCCCCTCTCCTGCAGAACCCTTGACTCTTGCAGACCCCACTCCCTTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CCA 72 bp | GACCCTGACCAGACTGATCCAGAGGCGGGAAGGGAGTaGGGTCTGCAAGAGTCAAGGGTTCTGCAGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: DPDQTDPEAGRE*GLQESRVLQER Trigger: CCTCTCCTGCAGAACCCTTGACTCTTGCAGACCCCACTCCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGTCTGGGCTGGAGACGGGCTGAAGGCGTGGCAGTCATGTTCCTGGCCCCTGCATGATGAAGGGCCCTaGGGATGCAGGTTTTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: TVWAGDGLKAWQSCSWPLHDEGP*GCRFSG Trigger: ACCTGAAAACCTGCATCCCAAGGGCCCTTCATCATG...CAGGGGCCAGGAACATGACTGCCACGCCTTCAGCCCGTCTCCAGCCCAGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR TCA 72 bp | TTCCAGCGAAGCCAACGCTGCCTCACTCCCTGCAGCTaGTTCGGAAGGAACGCAAAACCTGTGAGAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: FQRSQRCLTPCS*FGRNAKPVRTK Trigger: CTTTGTTCTCACAGGTTTTGCGTTCCTTCCGAATCAGCTGCAGGGAGTGAGGCAGCGTTGGCTTCGCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR GCA 72 bp | AGTGGGGTTTCAGACATTTATAAGCCAATGTATAGGTaGTGGGAATTGAGCCTACGTCCCCTGAAGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SGVSDIYKPMYR*WELSLRPLKSS Trigger: GCTGCTCTTCAGGGGACGTAGGCTCAATTCCCAGCACCTATACATTGGCTTATAAATGTCTGAAACCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR GCA 72 bp | TTTTTATTTTATGTGTGCCTTGCTTGCATGTATAACTaGACACCATGTGTATATGCAGTGCCTACAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: FLFYVCLACMYN*TPCVYAVPTNS Trigger: GGAATTTGTAGGCACTGCATATACACATGGTGTGCAGTTATACATGCAAGCAAGGCACACATAAAATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGAGTGGGGTCTGTGGGCTCCCTCGTGGTaGCCTGGCTTCCCCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: APEDPDQTDPEAGREWGLWAPSW*PGFPQW Trigger: CCACTGGGGGAAGCCAGGCCACCACGAGGGAGCCCA...CAGACCCCACTCCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | CCTAGAGAGGACATGGACACTCCATGGCTGACGGGCCAGGGCTGTGCTCTGGCAAGGCACAAGGGGCTGTaGCGAGGTCTGCTCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PREDMDTPWLTGQGCALARHKGL*RGLLRA Trigger: GGCCCTGAGCAGACCTCGTCACAGCCCCTTGTGCCT...TGCCAGAGCACAGCCCTGGCCCGTCAGCCATGGAGTGTCCATGTCCTCTCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | TCATGTTCCTGGCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGACAGCCTCTACCACCTaGCGCCTCTGTCTCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SCSWPLRTLTRLIQRREGTASTT*RLCLRS Trigger: GGAGCGGAGACAGAGGCGGCAGGTGGTAGAGGCTGT...CCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGCCAGGAACATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | GCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGAGTGGGGTCTGGCCTCACGCTGGCACTaGGGGTTAAGGGTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: APEDPDQTDPEAGREWGLASRWH*GLRVFL Trigger: CAGAAACACCCTTAACCCGCAGTGCCAGCGTGAGGC...CAGACCCCACTCCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | AGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGCAGGCTCTCTGGGCTCCCTCGTaGTGGCCTGGCTTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STQCGDITGTPSACWEQALWAPS*WPGFPQ Trigger: CTGGGGGAAGCCAGGCCACCACGAGGGAGCCCAGAG...AGCCTGCTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | CCTAGAGAGGACATGGACACTCCATGGCTGACGGGCCAGGGCTGTGCTCTGGCAGGAGGCTGGGGGCGATaGCTTAGAGACCTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PREDMDTPWLTGQGCALAGGWGR*LRDLCF Trigger: GAAGCAGAGGTCTCTAAGCCATCGCCCCCAGCCTCC...TGCCAGAGCACAGCCCTGGCCCGTCAGCCATGGAGTGTCCATGTCCTCTCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGCAGGCTAAGGCGTTCTTCGTCCTaGGCCCAAGGGCCTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALSVEISQAHRVPAGSRLRRSSS*AQGPLC Trigger: GCAGAGAGGCCCTTGGGCCCAGGACGAAGAACGCCT...TAGCCTGCTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | GCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGCAGGCTATCGGCGGGGCTGGTGTaGTCTGCTCTGCAGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALSVEISQAHRVPAGSRLSAGLV*SALQKK Trigger: CTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGA...TAGCCTGCTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | ACAGTCTGGGCTGGAGACGGGCTGAAGGCGTGGCAGTCATGTTCCTGGCCCCTGTTCATCATCTGTGGTTaGACTCAGGTTGCGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TVWAGDGLKAWQSCSWPLFIICG*TQVAVP Trigger: AGGCACCGCAACCTGAGTTCAACCACAGATGATGAA...CAGGGGCCAGGAACATGACTGCCACGCCTTCAGCCCGTCTCCAGCCCAGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGCCTGGCTTCCCCCAGTaGTCTGGGGCTGCTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: IGLALSVEISQAHRVPAGPGFPQ*SGAALT Trigger: TGTCAGAGCAGCCCCAGACCACTGGGGGAAGCCAGG...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGAGTGGGGTCTGCTGGGAATTTTCACCTaGAGTGTGATGGGTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: APEDPDQTDPEAGREWGLLGIFT*SVMGGK Trigger: TTTCCCACCCATCACACTCCAGGTGAAAATTCCCAG...CAGACCCCACTCCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GACGAAAAGGCACCGAGTTCCCGATCAGGGCAGCAGGAGGGTGGGGAACACAGTGGTTCTGTGCGGTTCTaGCCTGACAGCTCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: DEKAPSSRSGQQEGGEHSGSVRF*PDSSFS Trigger: TGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACC...ACTGTGTTCCCCACCCTCCTGCTGCCCTGATCGGGAACTCGGTGCCTTTTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | TCATGTTCCTGGCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGACCAGCTTCCTCTCCTaGATCTTCTCTGAGACGATG | + |
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Preference number: 4 (lower is better) Translates to: SCSWPLRTLTRLIQRREGTSFLS*IFSETM Trigger: CATCGTCTCAGAGAAGATGCAGGAGAGGAAGCTGGT...CCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGCCAGGAACATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | GCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGGCCCAAGGGCCTCTCTaGTCCCGACTCAGTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: ALSGFRIHCTFSGTRKFQAQGPL*SRLSLR Trigger: CCGGAGACTGAGTCGGGAGCAGAGAGGCCCTTGGGC...CTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | ACAGTCTGGGCTGGAGACGGGCTGAAGGCGTGGCAGTCATGTTCCTGGCCCCTGCTTCTCAAAGATGGATaGTTTCTCCGACACCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TVWAGDGLKAWQSCSWPLLLKDG*FLRHQL Trigger: AAGCTGGTGTCGGAGAAAGCATCCATCTTTGAGAAG...CAGGGGCCAGGAACATGACTGCCACGCCTTCAGCCCGTCTCCAGCCCAGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | CAAGAAAGTTCCAGAGAACACCTGCCCACAGTCTGGGCTGGAGACGGGCTGAAGGAGACGCTTTCTCTGTaGCTGTCCCCTTCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QESSREHLPTVWAGDGLKETLSL*LSPSLR Trigger: CCTCAGAGAAGGGGACAGCCACAGAGAAAGCGTCTC...CTTCAGCCCGTCTCCAGCCCAGACTGTGGGCAGGTGTTCTCTGGAACTTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGTCATCCGGAAGGAGATaGTCCTGGGGCTGGAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: IGLALSVEISQAHRVPAGSSGRR*SWGWSV Trigger: AACGCTCCAGCCCCAGGACCATCTCCTTCCGGATGA...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | TTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCGAACTCAGGTTGCGGTaGCTCCGCCTGCGTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FRIHCTFSGTRKFQRTPAELRLR*LRLRSR Trigger: GCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTC...GGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | AGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGTGGTGTGCTCTGCTCTaGAGAAGAAGGTGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RSSTQCGDITGTPSACWEWCALL*RRRWAL Trigger: AAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCA...CTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | TCATGTTCCTGGCCCCTGAGGACCCTGACCAGACTGATCCAGAGGCGGGAAGGGCTGCATCTTCATCCTTaGTGGGAATTTTCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SCSWPLRTLTRLIQRREGLHLHP*WEFSPG Trigger: TCCAGGTGAAAATTCCCAGCAAGGATGAAGATGCAG...CCCTTCCCGCCTCTGGATCAGTCTGGTCAGGGTCCTCAGGGGCCAGGAACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | CACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGCTGTCGGGCAAGGCTaGACAGCGCGGACCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HFPGSGYIVPSAGQESSRAVGQG*TARTSP Trigger: AGGACTGGTCCGCGCTGTCCAGCCTTGCCCGACAGC...TCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGCAGGCTACTCTGGATGGCTGTGTaGTATCTCTCCAGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALSVEISQAHRVPAGSRLLWMAV*YLSSFS Trigger: GGAGAAACTGGAGAGATACCACACAGCCATCCAGAG...TAGCCTGCTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGTGGTCTCCCGAATCCTaGGTCTTGCTGATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: IGLALSVEISQAHRVPAGWSPES*VLLIHR Trigger: CCTGTGGATCAGCAAGACCCAGGATTCGGGAGACCA...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGTTCATCTTTGGAGGCTaGGGGCGATGGCTTAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: IGLALSVEISQAHRVPAGFIFGG*GRWLRD Trigger: GTCTCTAAGCCATCGCCCCCAGCCTCCAAAGATGAA...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | CAAGAAAGTTCCAGAGAACACCTGCCCACAGTCTGGGCTGGAGACGGGCTGAAGAGCCACCGTCTCTTCTaGAAGCCTCTTTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QESSREHLPTVWAGDGLKSHRLF*KPLFSF Trigger: GAAGGAGAAAAGAGGCTTCCAGAAGAGACGGTGGCT...CTTCAGCCCGTCTCCAGCCCAGACTGTGGGCAGGTGTTCTCTGGAACTTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTGGCTGTCCCCTTCTCTaGGGGGCAGGCTTTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVGCPLL*GAGFLR Trigger: TCTGAGAAAGCCTGCCCCTCAGAGAAGGGGACAGCC...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | GCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGCTGCGTTCCCGCTCCTaGTCCTCTTCGTCCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: ALSGFRIHCTFSGTRKFQLRSRS*SSSSSK Trigger: TTTGGAGGACGAAGAGGAGCAGGAGCGGGAACGCAG...CTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGCAGAAACCAGTCTTTTaGCAGGCACTGGGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IGLALSVEISQAHRVPAGQKPVF*QALGSS Trigger: AGAAGACCCCAGTGCCTGCCAAAAGACTGGTTTCTG...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CAA 72 bp | GGGCTGTGCTCTGGCACTTTCCGGGTTCAGGATACATaGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GLCSGTFRVQDT*YLQRDKKVPEN Trigger: GTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGAGCACAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | GCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGACCAAGGTCTTCTGCTaGGCCACCGTCTCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALSGFRIHCTFSGTRKFQTKVFC*ATVSSG Trigger: TCCAGAAGAGACGGTGGCTCAGCAGAAGACCTTGGT...CTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | GGAAGGAACGCAAAACCTGTGAGAACAAAGCCATCGACATTACCAGACACTTACGGGAACTGCTGTAGGTaGGCAGGGTGGGTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRNAKPVRTKPSTLPDTYGNCCR*AGWVKV Trigger: CACCTTCACCCACCCTGCTCACCTACAGCAGTTCCC...GTAAGTGTCTGGTAATGTCGATGGCTTTGTTCTCACAGGTTTTGCGTTCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | TTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCTGTGCGGTTCTGGCCTaGCAGCTCCTTCTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRIHCTFSGTRKFQRTPACAVLA*QLLLKE Trigger: CTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACA...GGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | TTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCTGGCTTAGAGACCTCTaGTTCCTCCACACTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRIHCTFSGTRKFQRTPAWLRDL*FLHTGQ Trigger: CTGCCCAGTGTGGAGGAAGCAGAGGTCTCTAAGCCA...GGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGAGCAGGCTAATTCTGGGTGAGTTTTaGAGATTCATCATCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVEISQAHRVPAGSRLILGEF*RFIICG Trigger: ACCACAGATGATGAATCTCCAAAACTCACCCAGAAT...TAGCCTGCTCCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GAACGCAAAACCTGTGAGAACAAAGCCATCGACATTACCAGACACTTACACCTGTCCTGTACTGGAGCCTaGACAGCCTCTACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERKTCENKAIDITRHLHLSCTGA*TASTTC Trigger: GCAGGTGGTAGAGGCTGTCCAGGCTCCAGTACAGGA...CAGGTGTAAGTGTCTGGTAATGTCGATGGCTTTGTTCTCACAGGTTTTGCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GGAAGGAACGCAAAACCTGTGAGAACAAAGCCATCGACATTACCAGACACTTACCTCTGCAGAAGAAGGTaGGCTCTTGTCAGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRNAKPVRTKPSTLPDTYLCRRR*ALVREG Trigger: GCCCTCCCTGACAAGAGCCCACCTTCTTCTGCAGAG...GTAAGTGTCTGGTAATGTCGATGGCTTTGTTCTCACAGGTTTTGCGTTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCTCTCCACAGATCTCTaGGCTCCATTCTGGGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVLSTDL*APFWVS Trigger: ACTCACCCAGAATGGAGCTCAGAGATCTGTGGAGAG...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR TCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCACTGGGGTCTTCTCTaGGACAGGCGTTTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVHWGLL*DRRFLR Trigger: TCTGAGAAAACGCCTGTCTCAGAGAAGACCCCAGTG...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | TTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCCTTCATCTTCATCTTTaGAGGCTGGGGGCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRIHCTFSGTRKFQRTPALHLHL*RLGAMA Trigger: AGCCATCGCCCCCAGCCTCCAAAGATGAAGATGAAG...GGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGACGGATTCTGACCTCTaGATGGCTGTGTGGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSGFRIHCTFSGTRKFQTDSDL*MAVWYL Trigger: GAGATACCACACAGCCATCCAGAGGTCAGAATCCGT...CTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR GCA 90 bp | GCCTACAAATTCCCTAAAAGTGGGGTTTCAGACATTTATAAGCCAATGTATAGGCCAGTGGTCTGGGGCTaGTCTGACACTGCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AYKFPKSGVSDIYKPMYRPVVWG*SDTAAF Trigger: GAAGGCAGCAGTGTCAGAGCAGCCCCAGACCACTGG...CCTATACATTGGCTTATAAATGTCTGAAACCCCACTTTTAGGGAATTTGTAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTGAGATTCATCATCTGTaGTTGAACTCAGGTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVEIHHL*LNSGCG Trigger: ACCGCAACCTGAGTTCAACCACAGATGATGAATCTC...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| 3UTR CAA 72 bp | TCAGACATTTATAAGCCAATGTATAGGTGCTGGGAATaGAGCCTACGTCCCCTGAAGAGCAGCCAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDIYKPMYRCWE*SLRPLKSSQSS Trigger: AGAACTCTGGCTGCTCTTCAGGGGACGTAGGCTCAATTCCCAGCACCTATACATTGGCTTATAAATGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTTGGAACCAACTTCTCTaGGCTATGTCTTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVWNQLL*AMSFLS Trigger: ACTGAGAAAAGACATAGCCCAGAGAAGTTGGTTCCA...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CCA 90 bp | GCCTACAAATTCCCTAAAAGTGGGGTTTCAGACATTTATAAGCCAATGTATAGGCTGAGTTGTCTTTCCTaGGGCTCATCCGGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYKFPKSGVSDIYKPMYRLSCLS*GSSGRR Trigger: TCTCCTTCCGGATGAGCCCCAGGAAAGACAACTCAG...CCTATACATTGGCTTATAAATGTCTGAAACCCCACTTTTAGGGAATTTGTAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | CTCTTGTCAGGGAGGGCCCTTCCTCTGGGCTCCCTCGTGGTGGCCTaGCTTCCCCCAGTGGTCTGGGGCTGCTCTGACACTGCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGRALPLGSLVVA*LPPVVWGCSDTAAF Trigger: GAAGGCAGCAGTGTCAGAGCAGCCCCAGACCACTGGGGGAAGCCAGGCCACCACGAGGGAGCCCAGAGGAAGGGCCCTCCCTGACAAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 90 bp | CCGGCGAGGCAGGGCCTCCACTTTCTTCTTAGGCACAAGGGGCTGTaGCGAGGTCTGCTCAGGGCCCAGGCTGTCTCTTTCCTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PARQGLHFLLRHKGL*RGLLRAQAVSFLLC Trigger: GCAGAGGAGGAAAGAGACAGCCTGGGCCCTGAGCAGACCTCGTCACAGCCCCTTGTGCCTAAGAAGAAAGTGGAGGCCCTGCCTCGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | GCCTCTGGCCTCTCCTGTACTGGAGCCTGGACAGCCTCTACCACCTaGCGCCTCTGTCTCCGCTCCTTTCTGGTCCTAAGGATGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGLSCTGAWTASTT*RLCLRSFLVLRMAW Trigger: CCAGGCCATCCTTAGGACCAGAAAGGAGCGGAGACAGAGGCGGCAGGTGGTAGAGGCTGTCCAGGCTCCAGTACAGGAGAGGCCAGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | TGGGAAACGAGAGGCTTTGGTCGGCGGGGCTGGTGTGCTCTGCTCTaGAGAAGAAGGTGGGCTCTTGTCAGGGAGGGCCCTTCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WETRGFGRRGWCALL*RRRWALVREGPSSG Trigger: CCCAGAGGAAGGGCCCTCCCTGACAAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | ATGGGTGGGAAACGAGAGGCTTTGGTCGGCGGGGCTGGTGTGCTCTaGTCTGCAGAAGAAGGTGGGCTCTTGTCAGGGAGGGCCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MGGKREALVGGAGVL*SAEEGGLLSGRALP Trigger: AGGAAGGGCCCTCCCTGACAAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | TCTCTGTTCTTTAGGCGTTCTTCGTCCTGGGCCCAAGGGCCTCTCTaGTCCCGACTCAGTCTCCGGCGAGGCAGGGCCTCCACTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLFFRRSSSWAQGPL*SRLSLRRGRASTFF Trigger: GAAGAAAGTGGAGGCCCTGCCTCGCCGGAGACTGAGTCGGGAGCAGAGAGGCCCTTGGGCCCAGGACGAAGAACGCCTAAAGAACAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | CTGGAGTGTGATGGGTGGGAAACGAGAGGCTTTGGTCGGCGGGGCTaGTGTGCTCTGCTCTGCAGAAGAAGGTGGGCTCTTGTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LECDGWETRGFGRRG*CALLCRRRWALVRE Trigger: CTCCCTGACAAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCACCCATCACACTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | TTTTCTCCTTCCGCAAGCTCTCTGTTCTTTAGGCGTTCTTCGTCCTaGGCCCAAGGGCCTCTCTGCTCCCGACTCAGTCTCCGGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSPSASSLFFRRSSS*AQGPLCSRLSLRRG Trigger: GCCTCGCCGGAGACTGAGTCGGGAGCAGAGAGGCCCTTGGGCCCAGGACGAAGAACGCCTAAAGAACAGAGAGCTTGCGGAAGGAGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | AGGAGAGGGGCCGGCATGATGAAGGGCCCTTGGGATGCAGGTTTTCAGGTCCGTTCAAAGAGGTGTCGCTaGCTGGCTACACCGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAGMMKGPWDAGFQVRSKRCR*LATPAG Trigger: ACCTGCCGGTGTAGCCAGCAAGCGACACCTCTTTGA...ACGGACCTGAAAACCTGCATCCCAAGGGCCCTTCATCATGCCGGCCCCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | GAGATTCATCATCTGTGGTTGAACTCAGGTTGCGGTGCCTCCGCCTaGGTTCCCGCTCCTGCTCCTCTTCGTCCTCCAAAGTCCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EIHHLWLNSGCGASA*VPAPAPLRPPKSAV Trigger: GACAGCGGACTTTGGAGGACGAAGAGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | GAGGAGCCTGGAGACCTGACGGATTCTGACCTCTGGATGGCTGTGTaGTATCTCTCCAGTTTCTCCCCTAGCTTGACGGTGCTAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEPGDLTDSDLWMAV*YLSSFSPSLTVLAG Trigger: GCCGGCTAGCACCGTCAAGCTAGGGGAGAAACTGGAGAGATACCACACAGCCATCCAGAGGTCAGAATCCGTCAGGTCTCCAGGCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 90 bp | CTGAGCTCCATTCTGGGTGAGTTTTGGAGATTCATCATCTGTGGTTaGACTCAGGTTGCGGTGCCTCCGCCTGCGTTCCCGCTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSILGEFWRFIICG*TQVAVPPPAFPLLL Trigger: GAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAACTCACCCAGAATGGAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | CCCCTGACAGACGCAGATTCTCCTTTCGGATGGAGGTTGGTTCTGTaGGGTTCTGGCCTGACAGCTCCTTCTCAAAGAGGTGTCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLTDADSPFGWRLVL*GSGLTAPSQRGVAC Trigger: GCAAGCGACACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAATCTGCGTCTGTCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 90 bp | GTGAGTTTTGGAGATTCATCATCTGTGGTTGAACTCAGGTTGCGGTaGCTCCGCCTGCGTTCCCGCTCCTGCTCCTCTTCGTCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSFGDSSSVVELRLR*LRLRSRSCSSSSSK Trigger: TTTGGAGGACGAAGAGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | ACTTCAGTACGGGAGGAGCCTGGAGACCTGACGGATTCTGACCTCTaGATGGCTGTGTGGTATCTCTCCAGTTTCTCCCCTAGCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: TSVREEPGDLTDSDL*MAVWYLSSFSPSLT Trigger: CGTCAAGCTAGGGGAGAAACTGGAGAGATACCACACAGCCATCCAGAGGTCAGAATCCGTCAGGTCTCCAGGCTCCTCCCGTACTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | CTTTCTCCGACACCAGCTTCCTCTCCTGCATCTTCTCTGAGACGATaGCTTTTTCTAGAACTGGAGGGGACCTTCTCTCTGGTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSPTPASSPASSLRR*LFLELEGTFSLVLP Trigger: CGGCAGCACCAGAGAGAAGGTCCCCTCCAGTTCTAGAAAAAGCCATCGTCTCAGAGAAGATGCAGGAGAGGAAGCTGGTGTCGGAGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | AGACGCAGATTCTCCTTTCGGATGGAGGTTGGTTCTGTGCGGTTCTaGCCTGACAGCTCCTTCTCAAAGAGGTGTCGCTTGCTGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: RRRFSFRMEVGSVRF*PDSSFSKRCRLLAT Trigger: TGTAGCCAGCAAGCGACACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAATCTGCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 90 bp | GTCTTGATGTCACGACCCCTGACAGACGCAGATTCTCCTTTCGGATaGAGGTTGGTTCTGTGCGGTTCTGGCCTGACAGCTCCTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLMSRPLTDADSPFG*RLVLCGSGLTAPSQ Trigger: TTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAATCTGCGTCTGTCAGGGGTCGTGACATCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 90 bp | GTCTTCTCTGAGACAGGCGTTTTCTCAGAGACCAAGGTCTTCTGCTaGGCCACCGTCTCTTCTGGAAGCCTCTTTTCTCCTTCCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFSETGVFSETKVFC*ATVSSGSLFSPSAS Trigger: GCTTGCGGAAGGAGAAAAGAGGCTTCCAGAAGAGACGGTGGCTCAGCAGAAGACCTTGGTCTCTGAGAAAACGCCTGTCTCAGAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | ATAGGTCTAGCACTCAGTGTGGAGATATCACAGGCACACCGAGTGCCTGCTGGGATTCATCATCTGTGGTaGAACTCAGGTTGCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IGLALSVEISQAHRVPAGIHHLW*NSGCGA Trigger: GGCACCGCAACCTGAGTTCAACCACAGATGATGAAT...CCCAGCAGGCACTCGGTGTGCCTGTGATATCTCCACACTGAGTGCTAGACCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | TTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTCCAGAGAACACCTGCCGAAGAAGGTGGGCTCTaGTCAGGGAGGGCCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FRIHCTFSGTRKFQRTPAEEGGL*SGRALP Trigger: AGGAAGGGCCCTCCCTGACAAGAGCCCACCTTCTTC...GGCAGGTGTTCTCTGGAACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 90 bp | CCACACTGGGCAGCCTCTCCACAGATCTCTGAGCTCCATTCTGGGTaGGTTTTGGAGATTCATCATCTGTGGTTGAACTCAGGTTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PHWAASPQISELHSG*VLEIHHLWLNSGCG Trigger: ACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAACTCACCCAGAATGGAGCTCAGAGATCTGTGGAGAGGCTGCCCAGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 90 bp | GAGACCTCTGCTTCCTCCACACTGGGCAGCCTCTCCACAGATCTCTaGGCTCCATTCTGGGTGAGTTTTGGAGATTCATCATCTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETSASSTLGSLSTDL*APFWVSFGDSSSVV Trigger: AACCACAGATGATGAATCTCCAAAACTCACCCAGAATGGAGCTCAGAGATCTGTGGAGAGGCTGCCCAGTGTGGAGGAAGCAGAGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTTCTTCATCTTCATCTTaGGAGGCTGGGGGCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVSSSSS*EAGGDG Trigger: GCCATCGCCCCCAGCCTCCAAAGATGAAGATGAAGA...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTACACTGCTGCCTTCTTaGGCGTCAGCTTTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVTLLPS*ASALPL Trigger: CAGAGGCAAAGCTGACGCCAAAGAAGGCAGCAGTGT...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS-3UTR CAA 90 bp | TCTGGCACTTTCCGGGTTCAGGATACATTGTACCTTCAGCGGGACAAGAAAGTTAAGGGTGTTTCTGAGTaGTCTTTCCTGGGGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SGTFRVQDTLYLQRDKKVKGVSE*SFLGLI Trigger: GATGAGCCCCAGGAAAGACAACTCAGAAACACCCTT...AACTTTCTTGTCCCGCTGAAGGTACAATGTATCCTGAACCCGGAAAGTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
||
| CDS CCA 72 bp | GGGAGGGCCCTTCCTCTGGGCTCCCTCGTGGTGGCCTaGCTTCCCCCAGTGGTCTGGGGCTGCTCTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: GRALPLGSLVVA*LPPVVWGCSDT Trigger: AGTGTCAGAGCAGCCCCAGACCACTGGGGGAAGCCAGGCCACCACGAGGGAGCCCAGAGGAAGGGCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
||
| CDS GCA 72 bp | CTCAGGTTGCGGTGCCTCCGCCTGCGTTCCCGCTCCTaGTCCTCTTCGTCCTCCAAAGTCCGCTGTCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRLRCLRLRSRS*SSSSSKVRCRA Trigger: TGCCCGACAGCGGACTTTGGAGGACGAAGAGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | AGAGGCTTTGGTCGGCGGGGCTGGTGTGCTCTGCTCTaGAGAAGAAGGTGGGCTCTTGTCAGGGAGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RGFGRRGWCALL*RRRWALVREGP Trigger: AGGGCCCTCCCTGACAAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | CTCGTGGTGGCCTGGCTTCCCCCAGTGGTCTGGGGCTaGTCTGACACTGCTGCCTTCTTTGGCGTCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVVAWLPPVVWG*SDTAAFFGVSF Trigger: AAAGCTGACGCCAAAGAAGGCAGCAGTGTCAGAGCAGCCCCAGACCACTGGGGGAAGCCAGGCCACCACGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | CATCTGTGGTTGAACTCAGGTTGCGGTGCCTCCGCCTaGGTTCCCGCTCCTGCTCCTCTTCGTCCTCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLWLNSGCGASA*VPAPAPLRPPK Trigger: CTTTGGAGGACGAAGAGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | GTGGGAAACGAGAGGCTTTGGTCGGCGGGGCTGGTGTaGTCTGCTCTGCAGAAGAAGGTGGGCTCTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VGNERLWSAGLV*SALQKKVGSCQ Trigger: CTGACAAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | GATGGGTGGGAAACGAGAGGCTTTGGTCGGCGGGGCTaGTGTGCTCTGCTCTGCAGAAGAAGGTGGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: DGWETRGFGRRG*CALLCRRRWAL Trigger: AAGAGCCCACCTTCTTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCACCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | CAAAGAGGTGTCGCTTGCTGGCTACACCGGCAGGTGTaGCAAGGACTTCAGTACGGGAGGAGCCTGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: QRGVACWLHRQV*QGLQYGRSLET Trigger: GGTCTCCAGGCTCCTCCCGTACTGAAGTCCTTGTCACACCTGCCGGTGTAGCCAGCAAGCGACACCTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | GGAGATTCATCATCTGTGGTTGAACTCAGGTTGCGGTaGCTCCGCCTGCGTTCCCGCTCCTGCTCCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: GDSSSVVELRLR*LRLRSRSCSSS Trigger: CGAAGAGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | TTCACCTGGAGTGTGATGGGTGGGAAACGAGAGGCTTaGGTCGGCGGGGCTGGTGTGCTCTGCTCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FTWSVMGGKREA*VGGAGVLCSAE Trigger: TTCTGCAGAGCAGAGCACACCAGCCCCGCCGACCAAAGCCTCTCGTTTCCCACCCATCACACTCCAGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | ATGGCTGTGTGGTATCTCTCCAGTTTCTCCCCTAGCTaGACGGTGCTAGCCGGCAGCCTCACGCTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: MAVWYLSSFSPS*TVLAGSLTLAL Trigger: CAGTGCCAGCGTGAGGCTGCCGGCTAGCACCGTCAAGCTAGGGGAGAAACTGGAGAGATACCACACAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 90 bp | TCTGTGCGGTTCTGGCCTGACAGCTCCTTCTCAAAGAGGTGTCGCTaGCTGGCTACACCGGCAGGTGTGACAAGGACTTCAGTACGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SVRFWPDSSFSKRCR*LATPAGVTRTSVRE Trigger: CTCCCGTACTGAAGTCCTTGTCACACCTGCCGGTGTAGCCAGCAAGCGACACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | ACTTTCTTCTTAGGCACAAGGGGCTGTGACGAGGTCTaGTCAGGGCCCAGGCTGTCTCTTTCCTCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TFFLGTRGCDEV*SGPRLSLSSSA Trigger: GGCAGAGGAGGAAAGAGACAGCCTGGGCCCTGAGCAGACCTCGTCACAGCCCCTTGTGCCTAAGAAGAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | CGGGAGGAGCCTGGAGACCTGACGGATTCTGACCTCTaGATGGCTGTGTGGTATCTCTCCAGTTTCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: REEPGDLTDSDL*MAVWYLSSFSP Trigger: AGGGGAGAAACTGGAGAGATACCACACAGCCATCCAGAGGTCAGAATCCGTCAGGTCTCCAGGCTCCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | GTTTTGGAGATTCATCATCTGTGGTTGAACTCAGGTTaGGGTGCCTCCGCCTGCGTTCCCGCTCCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLEIHHLWLNSG*GASACVPAPAP Trigger: AGGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | AGTTTTGGAGATTCATCATCTGTGGTTGAACTCAGGTaGCGGTGCCTCCGCCTGCGTTCCCGCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFGDSSSVVELR*RCLRLRSRSCS Trigger: GGAGCAGGAGCGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | CTCACGCTGGCACTGCGGGTTAAGGGTGTTTCTGAGTaGTCTTTCCTGGGGCTCATCCGGAAGGAGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: LTLALRVKGVSE*SFLGLIRKEMV Trigger: GACCATCTCCTTCCGGATGAGCCCCAGGAAAGACAACTCAGAAACACCCTTAACCCGCAGTGCCAGCGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | ATGTGGACGGCTTGCTTCCCCATTGAGCCCTCTTGGTaGCTGATGCCTCTTTCCGTACCTCCTGAGAACCGT | + |
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Preference number: 6 (lower is better) Translates to: MWTACFPIEPSW*LMPLSVPPENR Trigger: ACGGTTCTCAGGAGGTACGGAAAGAGGCATCAGTCACCAAGAGGGCTCAATGGGGAAGCAAGCCGTCCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | GGAGACCTGACGGATTCTGACCTCTGGATGGCTGTGTaGTATCTCTCCAGTTTCTCCCCTAGCTTGACGGTG | + |
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Preference number: 6 (lower is better) Translates to: GDLTDSDLWMAV*YLSSFSPSLTV Trigger: CACCGTCAAGCTAGGGGAGAAACTGGAGAGATACCACACAGCCATCCAGAGGTCAGAATCCGTCAGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | TTCTGGCCTGACAGCTCCTTCTCAAAGAGGTGTCGCTaGCTGGCTACACCGGCAGGTGTGACAAGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: FWPDSSFSKRCR*LATPAGVTRTS Trigger: TGAAGTCCTTGTCACACCTGCCGGTGTAGCCAGCAAGCGACACCTCTTTGAGAAGGAGCTGTCAGGCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 90 bp | ATGTCACGACCCCTGACAGACGCAGATTCTCCTTTCGGATGGAGGTaGGTTCTGTGCGGTTCTGGCCTGACAGCTCCTTCTCAAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: MSRPLTDADSPFGWR*VLCGSGLTAPSQRG Trigger: ACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAATCTGCGTCTGTCAGGGGTCGTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | ATTCTGGGTGAGTTTTGGAGATTCATCATCTGTGGTTaGACTCAGGTTGCGGTGCCTCCGCCTGCGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ILGEFWRFIICG*TQVAVPPPAFP Trigger: CGGGAACGCAGGCGGAGGCACCGCAACCTGAGTTCAACCACAGATGATGAATCTCCAAAACTCACCCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | TTCAGTACGGGAGGAGCCTGGAGACCTGACGGATTCTaGCCTCTGGATGGCTGTGTGGTATCTCTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FSTGGAWRPDGF*PLDGCVVSLQF Trigger: AAACTGGAGAGATACCACACAGCCATCCAGAGGTCAGAATCCGTCAGGTCTCCAGGCTCCTCCCGTACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS GCA 72 bp | GACGCAGATTCTCCTTTCGGATGGAGGTTGGTTCTGTaGGGTTCTGGCCTGACAGCTCCTTCTCAAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: DADSPFGWRLVL*GSGLTAPSQRG Trigger: ACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAATCTGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | TTCTCCTTTCGGATGGAGGTTGGTTCTGTGCGGTTCTaGCCTGACAGCTCCTTCTCAAAGAGGTGTCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSFRMEVGSVRF*PDSSFSKRCRL Trigger: CAAGCGACACCTCTTTGAGAAGGAGCTGTCAGGCCAGAACCGCACAGAACCAACCTCCATCCGAAAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CAA 72 bp | TTCTCTGAGGGGCAGGCTTTCTCAGAAACCAGTCTTTaGGCAGGCACTGGGGTCTTCTCTGAGACAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: FSEGQAFSETSL*AGTGVFSETGV Trigger: AACGCCTGTCTCAGAGAAGACCCCAGTGCCTGCCAAAAGACTGGTTTCTGAGAAAGCCTGCCCCTCAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | GCTTCCTCCACACTGGGCAGCCTCTCCACAGATCTCTaGGCTCCATTCTGGGTGAGTTTTGGAGATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: ASSTLGSLSTDL*APFWVSFGDSS Trigger: TGATGAATCTCCAAAACTCACCCAGAATGGAGCTCAGAGATCTGTGGAGAGGCTGCCCAGTGTGGAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | GAGACAGGCGTTTTCTCAGAGACCAAGGTCTTCTGCTaGGCCACCGTCTCTTCTGGAAGCCTCTTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ETGVFSETKVFC*ATVSSGSLFSP Trigger: AGGAGAAAAGAGGCTTCCAGAAGAGACGGTGGCTCAGCAGAAGACCTTGGTCTCTGAGAAAACGCCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | AGAGACCAAGGTCTTCTGCTGAGCCACCGTCTCTTCTaGAAGCCTCTTTTCTCCTTCCGCAAGCTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RDQGLLLSHRLF*KPLFSFRKLSV Trigger: AACAGAGAGCTTGCGGAAGGAGAAAAGAGGCTTCCAGAAGAGACGGTGGCTCAGCAGAAGACCTTGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS CCA 72 bp | ACACCAGCTTCCTCTCCTGCATCTTCTCTGAGACGATaGCTTTTTCTAGAACTGGAGGGGACCTTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TPASSPASSLRR*LFLELEGTFSL Trigger: CAGAGAGAAGGTCCCCTCCAGTTCTAGAAAAAGCCATCGTCTCAGAGAAGATGCAGGAGAGGAAGCTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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| CDS TCA 72 bp | GCAGCCTCTCCACAGATCTCTGAGCTCCATTCTGGGTaGGTTTTGGAGATTCATCATCTGTGGTTGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: AASPQISELHSG*VLEIHHLWLNS Trigger: TGAGTTCAACCACAGATGATGAATCTCCAAAACTCACCCAGAATGGAGCTCAGAGATCTGTGGAGAGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038760.10 |
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