Pregenerated sensors for LACTBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070683Ensembl transcript IDs: ENSMUST00000178843.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGCTGCAGGTGGGCATGGGAAGGCTGGAGGCCCGCATAGGGGTTaGAAGCATGGGCAATGCAAAGGCATGTGTGGGCGCATGCACGTA | + |
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Preference number: 1 (lower is better) Translates to: KAAGGHGKAGGPHRG*KHGQCKGMCGRMHV Trigger: TACGTGCATGCGCCCACACATGCCTTTGCATTGCCCATGCTTGCAACCCCTATGCGGGCCTCCAGCCTTCCCATGCCCACCTGCAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR GCA 90 bp | GAAGACTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTaGCAAGCCCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: EDSTLPTTVSSGWSP*QAPVGSWRKGTAGV Trigger: CACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 90 bp | GTGGTCCAAGAAGACTCCACTTTGCCAACTACTGTGTCCTCTGGTTaGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGAAGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: VVQEDSTLPTTVSSG*SPCQAPVGSWRKGT Trigger: GGTCCCCTTCCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAGTCTTCTTGGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 90 bp | GAGGAGCAGAGGGAGGGGAGTGACCACAAAGGAAGAATAGGCGGGTaGATTAGGAATGGCGGGACTCTTCTGTATCTTGATAGCCCGGAT | + |
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Preference number: 1 (lower is better) Translates to: EEQREGSDHKGRIGG*IRNGGTLLYLDSPD Trigger: ATCCGGGCTATCAAGATACAGAAGAGTCCCGCCATTCCTAATCCACCCGCCTATTCTTCCTTTGTGGTCACTCCCCTCCCTCTGCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 90 bp | TGTGACCTGAAACTTCTGATTCACCCACCTCCTCCTCTCCAATCGTaGAGTCGCAGGTGGGAACCACCTCACTGTGTTTATAGGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CDLKLLIHPPPPLQS*SRRWEPPHCVYRVL Trigger: CAGGACCCTATAAACACAGTGAGGTGGTTCCCACCTGCGACTCCACGATTGGAGAGGAGGAGGTGGGTGAATCAGAAGTTTCAGGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR TCA 90 bp | CTGTATTATCGGGTCTGGACAACACCTAAATGTTTAAATGCTTACTaGAATTCCTGTATAACTAACTCTTCCTCTCAGGTGAGTAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LYYRVWTTPKCLNAY*NSCITNSSSQVSKG Trigger: CCCCTTACTCACCTGAGAGGAAGAGTTAGTTATACAGGAATTTCAGTAAGCATTTAAACATTTAGGTGTTGTCCAGACCCGATAATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGCTGCAGGTGGGCATaGGAAGGCTGGAGGCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: EAKGRGGCHGDGGEQEVVSCRWA*EGWRPA Trigger: TGCGGGCCTCCAGCCTTCCCATGCCCACCTGCAGCT...GACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAAAGGCAGAGGAGGTTaGCACGGGGATGGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LHFANYCVLWLVSLPSPGKGRGG*HGDGGE Trigger: CTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTT...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAAGGAAAGCTGCAGGTaGGCATGGGAAGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LHFANYCVLWLVSLPSPGKESCR*AWEGWR Trigger: CCTCCAGCCTTCCCATGCCCACCTGCAGCTTTCCTT...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CAA 90 bp | TGTGGTCCAAGAAGACTCCACTTTGCCAACTACTGTGTCCTCTGGTaGGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGAAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CGPRRLHFANYCVLW*VSLPSPGRKLEEGD Trigger: GTCCCCTTCCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAGTCTTCTTGGACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTGGCCCGCATAGGGGTTaGAAGCATGGGCAATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LHFANYCVLWLVSLPSPGGPHRG*KHGQCK Trigger: TTTGCATTGCCCATGCTTGCAACCCCTATGCGGGCC...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR GCA 90 bp | ACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGTGGGGAAAGAGAGGCTaGAAGCATGAGAAGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: TTVSSGWSPCQAPVGSWRWGKRG*KHEKLW Trigger: CCATAGCTTCTCATGCTTGCAGCCTCTCTTTCCCCA...CCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCCATACAAGGGAGGTTaGGGGTATGAAGAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: FANYCVLWLVSLPSPGRKPYKGG*GYEEAQ Trigger: TTGAGCCTCTTCATACCCGCAACCTCCCTTGTATGG...CTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACCCACGGGGATGGGGGTaGGCAAGAGGTTGTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLLNKCLNKPDGAFSFRHPRGWG*ARGCQA Trigger: TGCCTGACAACCTCTTGCTCACCCCCATCCCCGTGG...GTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACGAGGCTCAAGTGGGGTaGGGCCAAAGGCAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLLNKCLNKPDGAFSFRHEAQVG*GQRQRR Trigger: CCTCCTCTGCCTTTGGCCTCACCCCACTTGAGCCTC...GTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR GCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTTCTGGTTGGTCTCCCTaGCAAGCCCCGGTAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFSGWSP*QAPVGS Trigger: GCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGA...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACGAGGAAGGGGACCGCTaGAGTGGGATAGATCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GLLNKCLNKPDGAFSFRHEEGDR*SGIDPH Trigger: ATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTC...GTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACATGAAGAGGCTCAAGTaGGGTGAGGCCAAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GLLNKCLNKPDGAFSFRHMKRLK*GEAKGR Trigger: TCTGCCTTTGGCCTCACCCCACTTGAGCCTCTTCAT...GTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR GCA 72 bp | GGTGGGCATGGGAAGGCTGGAGGCCCGCATAGGGGTTaGAAGCATGGGCAATGCAAAGGCATGTGTGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: GGHGKAGGPHRG*KHGQCKGMCGR Trigger: GCGCCCACACATGCCTTTGCATTGCCCATGCTTGCAACCCCTATGCGGGCCTCCAGCCTTCCCATGCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR TCA 72 bp | AAGGGAGGTTGCGGGTATGAAGAGGCTCAAGTGGGGTaGGGCCAAAGGCAGAGGAGGTTGCCACGGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: KGGCGYEEAQVG*GQRQRRLPRGW Trigger: CCATCCCCGTGGCAACCTCCTCTGCCTTTGGCCTCACCCCACTTGAGCCTCTTCATACCCGCAACCTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR GCA 72 bp | GCTGGAGGCCCGCATAGGGGTTGCAAGCATGGGCAATaGAAAGGCATGTGTGGGCGCATGCACGTAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: AGGPHRGCKHGQ*KGMCGRMHVGM Trigger: CATCCCTACGTGCATGCGCCCACACATGCCTTTGCATTGCCCATGCTTGCAACCCCTATGCGGGCCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR GCA 72 bp | ACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTaGCAAGCCCCGGTAGGAAGCTGGAGGAAGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: TLPTTVSSGWSP*QAPVGSWRKGT Trigger: GGTCCCCTTCCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 72 bp | GAAGACTCCACTTTGCCAACTACTGTGTCCTCTGGTTaGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: EDSTLPTTVSSG*SPCQAPVGSWR Trigger: CCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 72 bp | CACCCACCTCCTCCTCTCCAATCGTGGAGTCGCAGGTaGGAACCACCTCACTGTGTTTATAGGGTCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: HPPPPLQSWSRR*EPPHCVYRVLH Trigger: GTGCAGGACCCTATAAACACAGTGAGGTGGTTCCCACCTGCGACTCCACGATTGGAGAGGAGGAGGTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CCA 72 bp | AAACTTCTGATTCACCCACCTCCTCCTCTCCAATCGTaGAGTCGCAGGTGGGAACCACCTCACTGTGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: KLLIHPPPPLQS*SRRWEPPHCVY Trigger: ATAAACACAGTGAGGTGGTTCCCACCTGCGACTCCACGATTGGAGAGGAGGAGGTGGGTGAATCAGAAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACTACTGTGTCCTCTGGTaGGTCTCCCTGCCAAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GLLNKCLNKPDGAFSFRHYCVLW*VSLPSP Trigger: GGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTA...GTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR-3UTR CAA 90 bp | CTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACATTGGGGTGAGCAAGAGGTaGTCAGGCAGTGTGGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LLNKCLNKPDGAFSFRHIGVSKR*SGSVGK Trigger: TTTCCCCACACTGCCTGACAACCTCTTGCTCACCCC...AATGTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR GCA 72 bp | GTGCCCTGGGTTCTATATGCGGGCCTACTAAATAAATaGCTAAACAAACCTGATGGTGCCTTTAGTTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: VPWVLYAGLLNK*LNKPDGAFSFR Trigger: CCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATATAGAACCCAGGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCCCCCGTTGGGCCCTGTaGTCCAGGGCCTTGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EAKGRGGCHGDGGEQEVVPRWAL*SRALGC Trigger: ACAGCCCAAGGCCCTGGAGCACAGGGCCCAACGGGG...GACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGGCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCACGCGCGGCCCAAACTaGCGCAAGCGCAGCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGTRGPN*RKRSSP Trigger: TGGCGAGCTGCGCTTGCGCCAGTTTGGGCCGCGCGT...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTGGGATAGATCCCCATACACGCGCCACGTGCAACTaGAAGACGCGGCCGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: PGRKLEEGDRWSGIDPHTRATCN*KTRPRT Trigger: CGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCG...TGTATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCGCCCCTCCACAGCAGTaGAGTGCCCCGGAGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGAPPQQ*SAPESS Trigger: CGAAGACTCCGGGGCACTTCACTGCTGTGGAGGGGC...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | ACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGGCGCAGCCGCAAGCCTaGCCAGGTCTGCAGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TTVSSGWSPCQAPVGSWRAQPQA*PGLQLS Trigger: CGACAGCTGCAGACCTGGCCAGGCTTGCGGCTGCGC...CCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCGGCACAAGCTCAGGGTaGCGGGGACACATCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGGTSSG*RGHIFT Trigger: GGTGAAGATGTGTCCCCGGCACCCTGAGCTTGTGCC...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCTTCCCTTTCAGAAGATaGGGCTGCTGGCGGGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGFPFRR*GCWRAR Trigger: TCGGGCCCGCCAGCAGCCCCATCTTCTGAAAGGGAA...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGCTCAGAGCCTCCTaGGTGCTGCCCCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LHFANYCVLWLVSLPSPGRLRAS*VLPLHS Trigger: GCTGTGGAGGGGCAGCACCCAGGAGGCTCTGAGCCT...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTCCAGGGAGTCCACGATaGCCTCCTCCCACAGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: LHFANYCVLWLVSLPSPGPGSPR*PPPTGD Trigger: ATCGCCTGTGGGAGGAGGGCATCGTGGACTCCCTGG...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTGACAGGGGACGGCCTTaGGAGGGAGCCCATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LHFANYCVLWLVSLPSPGDRGRP*EGAHLF Trigger: GAAGAGATGGGCTCCCTCCCAAGGCCGTCCCCTGTC...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCGAGAGAAGGCCAGCGTaGTGTAGTGGCATCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGERRPA*CSGIWF Trigger: GAACCAGATGCCACTACAGCACGCTGGCCTTCTCTC...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | GAGGCCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAACCAGTCTGCAGCTTaGGGAGGTAGAGCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: EAKGRGGCHGDGGEQEVVNQSAA*GGRAAT Trigger: TGTGGCAGCTCTACCTCCCCAAGCTGCAGACTGGTT...GACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CTCCACTTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTACCAGCTGGCCGTGCTaGGACTCCAGAGACAACCAG | + |
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Preference number: 4 (lower is better) Translates to: LHFANYCVLWLVSLPSPGTSWPC*DSRDNQ Trigger: CTGGTTGTCTCTGGAGTCCCAGCACGGCCAGCTGGT...ACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAAGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCTGCCCAGAGGGTTGTTaGTGGAGAATGTGCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGCPEGC*WRMCWH Trigger: ATGCCAGCACATTCTCCATCAACAACCCTCTGGGCA...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | ACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGAAGCCTGGCCAGGTCTaGAGCTGTCGAGTACATCTG | + |
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Preference number: 4 (lower is better) Translates to: TTVSSGWSPCQAPVGSWRKPGQV*SCRVHL Trigger: CAGATGTACTCGACAGCTGCAGACCTGGCCAGGCTT...CCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCAGGCGCACAGGGAAGATCTTaGAGATGCTGGCAATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PKAEEVATGMGVSKRLSGAQGRS*RCWQSG Trigger: ACCGGATTGCCAGCATCTCCAAGATCTTCCCTGTGC...GCCTGACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | TTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGGCTGTCGAGTACATCTaGCCCGATGGCCGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: FANYCVLWLVSLPSPGRKAVEYI*PDGRYQ Trigger: CTGGTACCGGCCATCGGGCCAGATGTACTCGACAGC...CTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | CCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTGGGATAGATCCCCATACAGGAAGAGGAAGCCACTaGGGGCCCACAAAAACCATT | + |
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Preference number: 4 (lower is better) Translates to: PGRKLEEGDRWSGIDPHTGRGSH*GPTKTI Trigger: AATGGTTTTTGTGGGCCCTCAGTGGCTTCCTCTTCC...TGTATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | CCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTGGGATAGATCCCCATACACAGTGTCATTATGGATaGCGAGGGCAGACATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGRKLEEGDRWSGIDPHTQCHYG*RGQTWQ Trigger: CTGCCATGTCTGCCCTCGTCATCCATAATGACACTG...TGTATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | TTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGTCCACAGCAGTGAAGTaGCCCGGAGTCTTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FANYCVLWLVSLPSPGRKSTAVK*PGVFGE Trigger: TTCCCCGAAGACTCCGGGGCACTTCACTGCTGTGGA...CTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | TTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGGGCTGGAGGCACCTCTaGCTTCAAGGAACCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FANYCVLWLVSLPSPGRKGWRHL*LQGTSL Trigger: CAGACTGGTTCCTTGAAGCCAGAGGTGCCTCCAGCC...CTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | TTTGCCAACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCATCTTCACCGGGGCTaGAGGCACCTCTGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FANYCVLWLVSLPSPGRKHLHRG*RHLWLQ Trigger: TTGAAGCCAGAGGTGCCTCCAGCCCCGGTGAAGATG...CTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGTTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAACTCGCGCGCCACGTaGAACTGGAAGACGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFNSRAT*NWKTRP Trigger: CGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTT...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGCGGTTCCAGCACCTaGTCAGACACCCAGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFSGSST*SDTQRS Trigger: TGAGCGCTGGGTGTCTGAGCAGGTGCTGGAACCGCT...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTGCCAGCAGCCAGACGTaGACGCACTGTTCCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFASSQT*THCSCQ Trigger: CTGACAGGAACAGTGCGTGCACGTCTGGCTGCTGGC...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTCCAGGACATCATCCTTaGGCAGGCTCAGAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFPGHHP*AGSEPP Trigger: AGGAGGCTCTGAGCCTGCTCAAGGATGATGTCCTGG...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | CTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACATTGCCAGTCATGGTCGCTaGGAGCAGGAAGAGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNKCLNKPDGAFSFRHIASHGR*EQEEEA Trigger: GGCTTCCTCTTCCTGCTCTCAGCGACCATGACTGGC...AATGTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | CTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACATTGTACATCTGGCCCGATaGCCGGTACCAGCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLNKCLNKPDGAFSFRHIVHLAR*PVPAQI Trigger: GATCTGGGCTGGTACCGGCCATCGGGCCAGATGTAC...AATGTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| 3UTR CAA 72 bp | ATAACTAACTCTTCCTCTCAGGTGAGTAAGGGGAGTTaGAAACCAGCTGTGGTCCAAGAAGACTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITNSSSQVSKGS*KPAVVQEDSTL Trigger: CAAAGTGGAGTCTTCTTGGACCACAGCTGGTTTCAAACTCCCCTTACTCACCTGAGAGGAAGAGTTAGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR GCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTGGAAGATCTTGGAGATaGTGGCAATCCGGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFGRSWR*WQSGTW Trigger: CCATGTACCGGATTGCCAGCATCTCCAAGATCTTCC...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
||
| CDS-3UTR CCA 90 bp | CTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGGCACATTGGAAGCAGCCAGTCATaGTCGCTGAGAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNKCLNKPDGAFSFRHIGSSQS*SLRAGR Trigger: TCTTCCTGCTCTCAGCGACCATGACTGGCTGCTTCC...AATGTGCCTAAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR TCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTTCCAGAATTTGGATCTaGGCCATTCTTCCTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFSRIWI*AILPPE Trigger: TTCGGGAGGAAGAATGGCTCAGATCCAAATTCTGGA...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CCA 90 bp | TATGCGGGCCTACTAAATAAATGCCTAAACAAACCTGATGGTGCCTTTAGTTTTAGCACAGTGTCATTATaGATGACGAGGGCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: YAGLLNKCLNKPDGAFSFSTVSL*MTRADM Trigger: CATGTCTGCCCTCGTCATCCATAATGACACTGTGCT...AAAACTAAAGGCACCATCAGGTTTGTTTAGGCATTTATTTAGTAGGCCCGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | GATCGGAAGGCGGCGGGCACGAGCGCCTCCACGCGCGGCCCAAACTaGCGCAAGCGCAGCTCGCCACGCGGCCCGGCGGCGCGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DRKAAGTSASTRGPN*RKRSSPRGPAARTS Trigger: CGAGGTGCGCGCCGCCGGGCCGCGTGGCGAGCTGCGCTTGCGCCAGTTTGGGCCGCGCGTGGAGGCGCTCGTGCCCGCCGCCTTCCGATC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | CAGGCGTCGGCGAGCGGCAGCGCGCACGGGAACTCGCGCGCCACGTaGAACTGGAAGACGCGGCCGCGCACGTGGCGCAGGGCGAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: QASASGSAHGNSRAT*NWKTRPRTWRRASD Trigger: ATCGCTCGCCCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTTCCCGTGCGCGCTGCCGCTCGCCGACGCCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | GGGAACTCGCGCGCCACGTGCAACTGGAAGACGCGGCCGCGCACGTaGCGCAGGGCGAGCGATCGGAAGGCGGCGGGCACGAGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSRATCNWKTRPRT*RRASDRKAAGTSAS Trigger: GGAGGCGCTCGTGCCCGCCGCCTTCCGATCGCTCGCCCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTTCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | TCGGCGAGCGGCAGCGCGCACGGGAACTCGCGCGCCACGTGCAACTaGAAGACGCGGCCGCGCACGTGGCGCAGGGCGAGCGATCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SASGSAHGNSRATCN*KTRPRTWRRASDRK Trigger: CTTCCGATCGCTCGCCCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTTCCCGTGCGCGCTGCCGCTCGCCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | GGGCGCGGGGGCAAGCTCAGCCTCTCGCAATGCGCGCTCCAGGGCTaGCAGCAGCGTATCCAGGGCGTCAGCCACCAGGTCGCGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGGKLSLSQCALQG*QQRIQGVSHQVARG Trigger: CCCACGCGCGACCTGGTGGCTGACGCCCTGGATACGCTGCTGCCAGCCCTGGAGCGCGCATTGCGAGAGGCTGAGCTTGCCCCCGCGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | TCGGGGACCTGCACCCAGGAGCGCAGCCGCAAGCCTGGCCAGGTCTaGAGCTGTCGAGTACATCTGGCCCGATGGCCGGTACCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGTCTQERSRKPGQV*SCRVHLARWPVPAQ Trigger: CTGGGCTGGTACCGGCCATCGGGCCAGATGTACTCGACAGCTGCAGACCTGGCCAGGCTTGCGGCTGCGCTCCTGGGTGCAGGTCCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | GCACGAGCGCCAGGCTGGCGGCATAGCCGTCCAAGTCGCCATCCTTaGGCGCCACGCGGTATCCACGCCTCTCGTGGAACTCCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARAPGWRHSRPSRHP*APRGIHASRGTPRV Trigger: CACCCTGGGAGTTCCACGAGAGGCGTGGATACCGCGTGGCGCGCAAGGATGGCGACTTGGACGGCTATGCCGCCAGCCTGGCGCTCGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | GGCCCGATGGCCGGTACCAGCCCAGATCGTAGAGCGGGGCGGACCTaGCGCTGCCATAGAAGCCAGCAGCCAGACGTGCACGCACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPMAGTSPDRRAGRT*RCHRSQQPDVHALF Trigger: GAACAGTGCGTGCACGTCTGGCTGCTGGCTTCTATGGCAGCGGCAGGTCCGCCCCGCTCTACGATCTGGGCTGGTACCGGCCATCGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | CGCAAGCCTGGCCAGGTCTGCAGCTGTCGAGTACATCTGGCCCGATaGCCGGTACCAGCCCAGATCGTAGAGCGGGGCGGACCTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKPGQVCSCRVHLAR*PVPAQIVERGGPAA Trigger: AGCGGCAGGTCCGCCCCGCTCTACGATCTGGGCTGGTACCGGCCATCGGGCCAGATGTACTCGACAGCTGCAGACCTGGCCAGGCTTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | GAGGCCCGGTACGTCGAAGCCCGGCGCCAACCCGTGGCGATCCAGTaGGTAGAACCGCACCAGCTGGCCGTGCTGGGACTCCAGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: EARYVEARRQPVAIQ*VEPHQLAVLGLQRQ Trigger: TTGTCTCTGGAGTCCCAGCACGGCCAGCTGGTGCGGTTCTACCCACTGGATCGCCACGGGTTGGCGCCGGGCTTCGACGTACCGGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | AGGGGACGGCCTTGGGAGGGAGCCCATCTCTTCAGATTCCCCCGTTaGGCCCTGTGCTCCAGGGCCTTGGGCTGTGCCCAGAGGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGRPWEGAHLFRFPR*ALCSRALGCAQRVV Trigger: AACAACCCTCTGGGCACAGCCCAAGGCCCTGGAGCACAGGGCCCAACGGGGGAATCTGAAGAGATGGGCTCCCTCCCAAGGCCGTCCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | GCAGGCTCAGAGCCTCCTGGGTGCTGCCCCTCCACAGCAGTGAAGTaGCCCGGAGTCTTCGGGGAAGTCCTGACAACTGACTGGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSEPPGCCPSTAVK*PGVFGEVLTTDWPS Trigger: GGATGGCCAGTCAGTTGTCAGGACTTCCCCGAAGACTCCGGGGCACTTCACTGCTGTGGAGGGGCAGCACCCAGGAGGCTCTGAGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | ATGGCCGGTACCAGCCCAGATCGTAGAGCGGGGCGGACCTGCCGCTaGCATAGAAGCCAGCAGCCAGACGTGCACGCACTGTTCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MAGTSPDRRAGRTCR*HRSQQPDVHALFLS Trigger: TGACAGGAACAGTGCGTGCACGTCTGGCTGCTGGCTTCTATGGCAGCGGCAGGTCCGCCCCGCTCTACGATCTGGGCTGGTACCGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CAA 90 bp | CCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTGGGATAGATCCCCATACACTGTGCTCCAGGGCCTaGGGCTGTGCCCAGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGRKLEEGDRWSGIDPHTLCSRA*GCAQRV Trigger: AACCCTCTGGGCACAGCCCAAGGCCCTGGAGCACAG...TGTATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS TCA 90 bp | ATCCCATCCACCTTCTCCAAGGCCTCCTTCAGCACCGGCAGGGGGTaGGCAAGAGGCACAAGCTCAGGGTGCCGGGGACACATCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: IPSTFSKASFSTGRG*ARGTSSGCRGHIFT Trigger: GGTGAAGATGTGTCCCCGGCACCCTGAGCTTGTGCCTCTTGCTCACCCCCTGCCGGTGCTGAAGGAGGCCTTGGAGAAGGTGGATGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS TCA 90 bp | TGTAGTGGCATCTGGTTCCTGGGTCAGCCACCAGGACATCATCCTTaGGCAGGCTCAGAGCCTCCTGGGTGCTGCCCCTCCACAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSGIWFLGQPPGHHP*AGSEPPGCCPSTAV Trigger: CACTGCTGTGGAGGGGCAGCACCCAGGAGGCTCTGAGCCTGCTCAAGGATGATGTCCTGGTGGCTGACCCAGGAACCAGATGCCACTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | CCCTGTGCGCAGCCAGCACATGGGCTAGGAGAGAGAAGGCCAGCGTaGTGTAGTGGCATCTGGTTCCTGGGTCAGCCACCAGGACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCAQPAHGLGERRPA*CSGIWFLGQPPGHH Trigger: ATGATGTCCTGGTGGCTGACCCAGGAACCAGATGCCACTACAGCACGCTGGCCTTCTCTCTCCTAGCCCATGTGCTGGCTGCGCACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 90 bp | ATGTGCTGGCATAGCGCTCCAGAGGGTCGTCCAGGGAGTCCACGATaGCCTCCTCCCACAGGCGATACAGCATCAGCACAGGGAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: MCWHSAPEGRPGSPR*PPPTGDTASAQGRS Trigger: AGATCTTCCCTGTGCTGATGCTGTATCGCCTGTGGGAGGAGGGCATCGTGGACTCCCTGGACGACCCTCTGGAGCGCTATGCCAGCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAAAGGCAGAGGAGGTTGCCACGGGGATGGGGGTGAGCAAGAGGTTGTCGTGCCCAGAGGGTTGTaGATGGAGAATGTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAKGRGGCHGDGGEQEVVVPRGL*MENVLA Trigger: TGCCAGCACATTCTCCATCAACAACCCTCTGGGCAC...GACAACCTCTTGCTCACCCCCATCCCCGTGGCAACCTCCTCTGCCTTTGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CAA 90 bp | ACTACTGTGTCCTCTGGTTGGTCTCCCTGCCAAGCCCCGGTAGGAAGCTGGAGGAGCACAGGGAAGATCTaGGAGATGCTGGCAATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTVSSGWSPCQAPVGSWRSTGKI*EMLAIR Trigger: CCGGATTGCCAGCATCTCCAAGATCTTCCCTGTGCT...CCTCCAGCTTCCTACCGGGGCTTGGCAGGGAGACCAACCAGAGGACACAGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS-3UTR CAA 90 bp | CCCGGTAGGAAGCTGGAGGAAGGGGACCGCTGGAGTGGGATAGATCCCCATACAGCTGTGCCCAGAGGGTaGTTGATGGAGAATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRKLEEGDRWSGIDPHTAVPRG*LMENVL Trigger: CAGCACATTCTCCATCAACAACCCTCTGGGCACAGC...TGTATGGGGATCTATCCCACTCCAGCGGTCCCCTTCCTCCAGCTTCCTACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 90 bp | CCATTCTTCCTCCCGAAGTTCCCAGTCCAGAGCACAGTGTCATTATaGATGACGAGGGCAGACATGGCAGCCAGGCCTGGGGCCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PFFLPKFPVQSTVSL*MTRADMAARPGANI Trigger: GATGTTGGCCCCAGGCCTGGCTGCCATGTCTGCCCTCGTCATCCATAATGACACTGTGCTCTGGACTGGGAACTTCGGGAGGAAGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS TCA 90 bp | GGAAGCAGCCAGTCATGGTCGCTGAGAGCAGGAAGAGGAAGCCACTaGGGGCCCACAAAAACCATTTCTTCTTCCCTTTCAGAAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSQSWSLRAGRGSH*GPTKTISSSLSEDG Trigger: CCCATCTTCTGAAAGGGAAGAAGAAATGGTTTTTGTGGGCCCTCAGTGGCTTCCTCTTCCTGCTCTCAGCGACCATGACTGGCTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 72 bp | GCGAGCGGCAGCGCGCACGGGAACTCGCGCGCCACGTaGAACTGGAAGACGCGGCCGCGCACGTGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASGSAHGNSRAT*NWKTRPRTWRR Trigger: CCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTTCCCGTGCGCGCTGCCGCTCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | CGCGCCACGTGCAACTGGAAGACGCGGCCGCGCACGTaGCGCAGGGCGAGCGATCGGAAGGCGGCGGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RATCNWKTRPRT*RRASDRKAAGT Trigger: CGTGCCCGCCGCCTTCCGATCGCTCGCCCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | GGCAGCGCGCACGGGAACTCGCGCGCCACGTGCAACTaGAAGACGCGGCCGCGCACGTGGCGCAGGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSAHGNSRATCN*KTRPRTWRRAS Trigger: GCTCGCCCTGCGCCACGTGCGCGGCCGCGTCTTCCAGTTGCACGTGGCGCGCGAGTTCCCGTGCGCGCTGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS TCA 72 bp | CGGCGCGCACCTCGTAGAAGGTGCGGTTGGCGAAGGTaGAAAAGCCAGCGAACGGGCGCGCGCGGGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRAPRRRCGWRR*KSQRTGARGAG Trigger: CCCCGCCCCGCGCGCGCCCGTTCGCTGGCTTTTTCACCTTCGCCAACCGCACCTTCTACGAGGTGCGCGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
||
| CDS TCA 72 bp | CTGGCCTGCGTGGCAAGCGCAGCACTCCGTAGGTGTTaGGGCCCGGTACGTCGAAGCCCGGCGCCAACCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LACVASAALRRC*GPVRRSPAPTR Trigger: ACGGGTTGGCGCCGGGCTTCGACGTACCGGGCCTCAACACCTACGGAGTGCTGCGCTTGCCACGCAGGCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
||
| CDS GCA 72 bp | GCCGGTACCAGCCCAGATCGTAGAGCGGGGCGGACCTaGCGCTGCCATAGAAGCCAGCAGCCAGACGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGTSPDRRAGRT*RCHRSQQPDVH Trigger: GTGCACGTCTGGCTGCTGGCTTCTATGGCAGCGGCAGGTCCGCCCCGCTCTACGATCTGGGCTGGTACCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | GGCAAGCTCAGCCTCTCGCAATGCGCGCTCCAGGGCTaGCAGCAGCGTATCCAGGGCGTCAGCCACCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GKLSLSQCALQG*QQRIQGVSHQV Trigger: GACCTGGTGGCTGACGCCCTGGATACGCTGCTGCCAGCCCTGGAGCGCGCATTGCGAGAGGCTGAGCTTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | TACGTCGAAGCCCGGCGCCAACCCGTGGCGATCCAGTaGGTAGAACCGCACCAGCTGGCCGTGCTGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: YVEARRQPVAIQ*VEPHQLAVLGL Trigger: GAGTCCCAGCACGGCCAGCTGGTGCGGTTCTACCCACTGGATCGCCACGGGTTGGCGCCGGGCTTCGACGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
||
| CDS CAA 90 bp | CAGGGGACGGCCTTGGGAGGGAGCCCATCTCTTCAGATTCCCCCGTaGGGCCCTGTGCTCCAGGGCCTTGGGCTGTGCCCAGAGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QGTALGGSPSLQIPP*GPVLQGLGLCPEGC Trigger: ACAACCCTCTGGGCACAGCCCAAGGCCCTGGAGCACAGGGCCCAACGGGGGAATCTGAAGAGATGGGCTCCCTCCCAAGGCCGTCCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 72 bp | TGCACCCAGGAGCGCAGCCGCAAGCCTGGCCAGGTCTaGAGCTGTCGAGTACATCTGGCCCGATGGCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: CTQERSRKPGQV*SCRVHLARWPV Trigger: TACCGGCCATCGGGCCAGATGTACTCGACAGCTGCAGACCTGGCCAGGCTTGCGGCTGCGCTCCTGGGTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | CCTTGGGAGGGAGCCCATCTCTTCAGATTCCCCCGTTaGGCCCTGTGCTCCAGGGCCTTGGGCTGTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PWEGAHLFRFPR*ALCSRALGCAQ Trigger: CTGGGCACAGCCCAAGGCCCTGGAGCACAGGGCCCAACGGGGGAATCTGAAGAGATGGGCTCCCTCCCAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | GGCCAGGTCTGCAGCTGTCGAGTACATCTGGCCCGATaGCCGGTACCAGCCCAGATCGTAGAGCGGGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: GQVCSCRVHLAR*PVPAQIVERGG Trigger: TCCGCCCCGCTCTACGATCTGGGCTGGTACCGGCCATCGGGCCAGATGTACTCGACAGCTGCAGACCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 72 bp | CATAGCGCTCCAGAGGGTCGTCCAGGGAGTCCACGATaGCCTCCTCCCACAGGCGATACAGCATCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: HSAPEGRPGSPR*PPPTGDTASAQ Trigger: CTGTGCTGATGCTGTATCGCCTGTGGGAGGAGGGCATCGTGGACTCCCTGGACGACCCTCTGGAGCGCTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | AAGCTCAGGGTGCCGGGGACACATCTTCACCGGGGCTaGAGGCACCTCTGGCTTCAAGGAACCAGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KLRVPGTHLHRG*RHLWLQGTSLQ Trigger: CTGCAGACTGGTTCCTTGAAGCCAGAGGTGCCTCCAGCCCCGGTGAAGATGTGTCCCCGGCACCCTGAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS GCA 72 bp | CAGCCAGCACATGGGCTAGGAGAGAGAAGGCCAGCGTaGTGTAGTGGCATCTGGTTCCTGGGTCAGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: QPAHGLGERRPA*CSGIWFLGQPP Trigger: TGGTGGCTGACCCAGGAACCAGATGCCACTACAGCACGCTGGCCTTCTCTCTCCTAGCCCATGTGCTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS CCA 72 bp | CCCACAGGCGATACAGCATCAGCACAGGGAAGATCTTaGAGATGCTGGCAATCCGGTACATGGTATACTCAT | + |
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Preference number: 6 (lower is better) Translates to: PTGDTASAQGRS*RCWQSGTWYTH Trigger: ATGAGTATACCATGTACCGGATTGCCAGCATCTCCAAGATCTTCCCTGTGCTGATGCTGTATCGCCTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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| CDS TCA 72 bp | CATGGTATACTCATTAGGGGTTCCAGAATTTGGATCTaGGCCATTCTTCCTCCCGAAGTTCCCAGTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HGILIRGSRIWI*AILPPEVPSPE Trigger: CTCTGGACTGGGAACTTCGGGAGGAAGAATGGCTCAGATCCAAATTCTGGAACCCCTAATGAGTATACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178843.3 |
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