Pregenerated sensors for LACTB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025937Ensembl transcript IDs: ENSMUST00000027071.7
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGGAAGTGTGTCGCTGTGGGCTTGGGAGAGCCTCCTCCAGGCTaGCTGCAGAAGACAGTCTTGTTCTGGCTGCCTTCAGATCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: WRKCVAVGLGEPPPG*LQKTVLFWLPSDQD Trigger: ATCTTGATCTGAAGGCAGCCAGAACAAGACTGTCTTCTGCAGGCAGCCTGGAGGAGGCTCTCCCAAGCCCACAGCGACACACTTCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR TCA 90 bp | ATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATTaGACTCAGGACCTCTGGAAGAGCAGTCATTGCTCTCAACCGCGG | + |
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Preference number: 1 (lower is better) Translates to: IPLQMVVSHHVVAGN*TQDLWKSSHCSQPR Trigger: CCGCGGTTGAGAGCAATGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 90 bp | GGTTTGAATAGAAACGGCCCCCATAGACTCATGTGTTTGAATGCTTaGCCCATAGGGAGTGGCACTATTAGGAGGTATGGCCTTGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: GLNRNGPHRLMCLNA*PIGSGTIRRYGLVG Trigger: TCCAACAAGGCCATACCTCCTAATAGTGCCACTCCCTATGGGCCAAGCATTCAAACACATGAGTCTATGGGGGCCGTTTCTATTCAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGAAATTGAACTCAGGACCTCTGGAAGAGCAGTCATTGCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPCGC*KLNSGPLEEQSLLS Trigger: TGAGAGCAATGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR TCA 90 bp | GTAGATACCTGCTTAAGTCAGGCTTTGGGAATGGTTCTCAGAAGCTaGACTGCTCAGACATACTGTGAGTTTGTTTTATCTTTCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: VDTCLSQALGMVLRS*TAQTYCEFVLSFRS Trigger: GCTTCTGAAAGATAAAACAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCTGACTTAAGCAGGTATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR TCA 90 bp | GTGGTCAGTGTCACCATTCATGCCCAGAACTTTTTACACTCTTACTaGAACTTGAGTAAGTCTGTCCCTTTTCCTCCAAATCATTCACAA | + |
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Preference number: 1 (lower is better) Translates to: VVSVTIHAQNFLHSY*NLSKSVPFPPNHSQ Trigger: TTGTGAATGATTTGGAGGAAAAGGGACAGACTTACTCAAGTTTCAGTAAGAGTGTAAAAAGTTCTGGGCATGAATGGTGACACTGACCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 90 bp | CCTTCTATACACTTTCCTGCTTCATGTAAGTGGAATCCTGATGTTTaGCTTTGGTGTCTTATCTCATGTAGCACTGTGTCTTTGGAATTC | + |
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Preference number: 1 (lower is better) Translates to: PSIHFPASCKWNPDV*LWCLISCSTVSLEF Trigger: GAATTCCAAAGACACAGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTATAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 90 bp | ATACACTTTCCTGCTTCATGTAAGTGGAATCCTGATGTTTGCCTTTaGTGTCTTATCTCATGTAGCACTGTGTCTTTGGAATTCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: IHFPASCKWNPDVCL*CLISCSTVSLEFMH Trigger: GTGCATGAATTCCAAAGACACAGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 90 bp | CATTCACAATTCTTTCCTTCTATACACTTTCCTGCTTCATGTAAGTaGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: HSQFFPSIHFPASCK*NPDVCLWCLISCST Trigger: AGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTATAGAAGGAAAGAATTGTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCCCCTTCTGGCCTCTGTaGACACTGCACACATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GKASSWSSPLLPVDSSGGPFWPL*TLHTWS Trigger: ACTCCATGTGTGCAGTGTGCACAGAGGCCAGAAGGG...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTTGTGTTTGGCTTGCGGGTGGGGTGGGGTaGGGAGGTGTTGCCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TVIQMGRKLEPVPICVWLAGGVG*GGVASG Trigger: TCCTGAGGCAACACCTCCCCACCCCACCCCACCCGC...AAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGGGAAGTGTGTCGCTGTaGGCTTGGGAGAGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SAVLSNGCSSRGPSLILWGSVSL*AWESLL Trigger: GAGGAGGCTCTCCCAAGCCCACAGCGACACACTTCC...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATaGAACTCAGGACCTCTGGAAGAGCAGTCATTGCTCTCAACCGCG | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWK*NSGPLEEQSLLSTA Trigger: CGCGGTTGAGAGCAATGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 90 bp | AACTGTGGTGGTTTGAATAGAAACGGCCCCCATAGACTCATGTGTTaGAATGCTTGGCCCATAGGGAGTGGCACTATTAGGAGGTATGGC | + |
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Preference number: 2 (lower is better) Translates to: NCGGLNRNGPHRLMC*NAWPIGSGTIRRYG Trigger: GCCATACCTCCTAATAGTGCCACTCCCTATGGGCCAAGCATTCAAACACATGAGTCTATGGGGGCCGTTTCTATTCAAACCACCACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | TCAAGTCCTGAAATTTGCTCTGTTGACCAGGCCTCTAACTCAAGAGATCCGCCTATTAAAGGCGTGTGCTaGCACCACCTGGCTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSPEICSVDQASNSRDPPIKGVC*HHLAFH Trigger: GTGAAAAGCCAGGTGGTGGCAGCACACGCCTTTAAT...AGGCGGATCTCTTGAGTTAGAGGCCTGGTCAACAGAGCAAATTTCAGGACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAAAGTCTCTTCTCTCCAGCAATCAGTATTGCCGAGATAACCTTGGGGAGGCTGGAGAGATGAGATaGCTCAGCAGTTCTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RLKSLLSSNQYCRDNLGEAGEMR*LSSSEQ Trigger: TTGCTCAGAACTGCTGAGCCATCTCATCTCTCCAGC...CTCCCCAAGGTTATCTCGGCAATACTGATTGCTGGAGAGAAGAGACTTTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGTGCACACTGCACACATaGAGTGCACAGATACTCATG | + |
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Preference number: 2 (lower is better) Translates to: SAVLSNGCSSRGPSLILWCTLHT*SAQILM Trigger: CATGAGTATCTGTGCACTCCATGTGTGCAGTGTGCA...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | CAACTGATTGTAAAGGTCCCAGTTTCTTTGTACCTCAGTGGCTGCTCTTTTTATATCCAGTGCCCCTTCTaGCCTCTGTGCACACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QLIVKVPVSLYLSGCSFYIQCPF*PLCTLH Trigger: GTGCAGTGTGCACAGAGGCCAGAAGGGGCACTGGAT...ATAAAAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGATAACTGTGGTGGTTTaGATAGAAACGGCCCCCATA | + |
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Preference number: 2 (lower is better) Translates to: SAVLSNGCSSRGPSLILWITVVV*IETAPI Trigger: TATGGGGGCCGTTTCTATTCAAACCACCACAGTTAT...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGACTAACACCTGTAACTaGAGTTCCAGGGAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SAVLSNGCSSRGPSLILWTNTCN*SSRESS Trigger: ACTGGATTCCCTGGAACTGCAGTTACAGGTGTTAGT...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGGAAGGCAGTTATTACTGATCACTTTAGGGACACCACTTGGCACTGACAAATGGGCAGGAAGCTaGAACCTGTTCCAATTTGTG | + |
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Preference number: 2 (lower is better) Translates to: HCGRQLLLITLGTPLGTDKWAGS*NLFQFV Trigger: CACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTT...GTCAGTGCCAAGTGGTGTCCCTAAAGTGATCAGTAATAACTGCCTTCCACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 90 bp | ATCTTGATAACAAGGACAAGAGCTCGATCAAGCCCTGATGTTGTTTaGCTCACCTTTGTTGCTGCAGTATCTGGCACAGTCCCCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: ILITRTRARSSPDVV*LTFVAAVSGTVPSK Trigger: TTTACTGGGGACTGTGCCAGATACTGCAGCAACAAAGGTGAGCAAAACAACATCAGGGCTTGATCGAGCTCTTGTCCTTGTTATCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTTGTGTTTGGCTTACTCATGTGTTTGAATaGTTGGCCCATAGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TVIQMGRKLEPVPICVWLTHVFE*LAHREW Trigger: CCACTCCCTATGGGCCAAGCATTCAAACACATGAGT...AAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | CAATTCTTTCCTTCTATACACTTTCCTGCTTCATGTAAGTGGAATCCTGATGTTGGGGTGGGGAGGTGTTaGCTCAGGAAAGGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: QFFPSIHFPASCKWNPDVGVGRC*LRKGIF Trigger: GAAGATGCCTTTCCTGAGGCAACACCTCCCCACCCC...AACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTATAGAAGGAAAGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTTGTGTTTGGCTTGGAAAGGCATCTTCCTaGAGCTCTCCTCTATTACCT | + |
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Preference number: 2 (lower is better) Translates to: TVIQMGRKLEPVPICVWLGKASS*SSPLLP Trigger: AGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC...AAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGTTGTATTCAACCCTCTaGGAAAGAGCAGCTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: YLQCALSEVCCGNVTTAWLYSTL*ERAAKR Trigger: CCTCTTAGCTGCTCTTTCCCAGAGGGTTGAATACAA...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 90 bp | CCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCACTGTGTCTTaGGAATTCATGCACCATGCAACATCTGTCAGGCATCTCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PDVCLWCLISCSTVS*EFMHHATSVRHLCF Trigger: AAAACAGAGATGCCTGACAGATGTTGCATGGTGCATGAATTCCAAAGACACAGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGTGTCTTTGGAATTCATaGACCATGCAACATCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: YLQCALSEVCCGNVTTAWCLWNS*TMQHLS Trigger: TGACAGATGTTGCATGGTGCATGAATTCCAAAGACA...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 90 bp | AATAGATTTAGTAGTTCCCCATCCTTCCCCTTTGAGAAGATCTACTaGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACT | + |
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Preference number: 2 (lower is better) Translates to: NRFSSSPSFPFEKIY*QCALSEVCCGNVTT Trigger: AGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTAGATCTTCTCAAAGGGGAAGGATGGGGAACTACTAAATCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR TCA 90 bp | TGGAATTCATGCACCATGCAACATCTGTCAGGCATCTCTGTTTTTAAGGTGTTTTTTGTTGTCCATTTGTaGGTTATCTGGGTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: WNSCTMQHLSGISVFKVFFVVHL*VIWVTG Trigger: GCCAGTGACCCAGATAACTCACAAATGGACAACAAA...AAACACCTTAAAAACAGAGATGCCTGACAGATGTTGCATGGTGCATGAATTCCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGTTTACAGTGTTTTTGTaGTCAGTGTCACCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: YLQCALSEVCCGNVTTAWFTVFL*SVSPFM Trigger: CATGAATGGTGACACTGACCACAAAAACACTGTAAA...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR GCA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGTTGTACCTCAGTGGCTaGTCTTTTTATTTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: YLQCALSEVCCGNVTTAWLYLSG*SFYFQK Trigger: TTTCTGAAAATAAAAAGAGCAGCCACTGAGGTACAA...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGGTAACAGGCATTTCACTGGTTCAGAAGGGATGATGATGGCTAGGACTTTCTTTGTACCTCAGTaGCTGCTCTTTTTATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TRGNRHFTGSEGMMMARTFFVPQ*LLFLFS Trigger: TGAAAATAAAAAGAGCAGCCACTGAGGTACAAAGAA...AGTCCTAGCCATCATCATCCCTTCTGAACCAGTGAAATGCCTGTTACCTCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | CAACTGATTGTAAAGGTCCCAGTTTCTTTGTACCTCAGTGGCTGCTCTTTTTATAGTTATCTGGGTCACTaGCTTTTAATTCTTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QLIVKVPVSLYLSGCSFYSYLGH*LLILEF Trigger: AAACTCAAGAATTAAAAGCCAGTGACCCAGATAACT...ATAAAAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTTGTTTTATCTTTCAGAAGCTGCTCTATCAACTGATTGTAAAGGTCCCCTTAGGCATCTTCTTTaGAGAAACATTTGTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSLFYLSEAALSTDCKGPLRHLL*RNICCP Trigger: TGGACAACAAATGTTTCTCCAAAGAAGATGCCTAAG...GGGACCTTTACAATCAGTTGATAGAGCAGCTTCTGAAAGATAAAACAAACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | AGGGAATCCAGTGCCCCTTCTGGCCTCTGTGCACACTaGACACATGGAGTGCACAGATACTCATGTAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RESSAPSGLCAH*THGVHRYSCRQ Trigger: TTGCCTACATGAGTATCTGTGCACTCCATGTGTGCAGTGTGCACAGAGGCCAGAAGGGGCACTGGATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | ATTCTGTGGACACACATGGTGACTAACACCTGTAACTaGAGTTCCAGGGAATCCAGTGCCCCTTCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ILWTHMVTNTCN*SSRESSAPSGL Trigger: GAGGCCAGAAGGGGCACTGGATTCCCTGGAACTGCAGTTACAGGTGTTAGTCACCATGTGTGTCCACAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCCTGCAGAAGACAGTCTaGTTCTGGCTGCCTTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: GKASSWSSPLLPVDSSGGLQKTV*FWLPSD Trigger: ATCTGAAGGCAGCCAGAACAAGACTGTCTTCTGCAG...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | CCTCAGCCTCTGAGTGCTGGGATTAAAGGCGTGTGCTaGCACCACCTGGCTTTTCACAGATTTTTAGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: PQPLSAGIKGVC*HHLAFHRFLAQ Trigger: TTGAGCTAAAAATCTGTGAAAAGCCAGGTGGTGGCAGCACACGCCTTTAATCCCAGCACTCAGAGGCTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 72 bp | AGAAACGGCCCCCATAGACTCATGTGTTTGAATGCTTaGCCCATAGGGAGTGGCACTATTAGGAGGTATGGC | + |
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Preference number: 3 (lower is better) Translates to: RNGPHRLMCLNA*PIGSGTIRRYG Trigger: GCCATACCTCCTAATAGTGCCACTCCCTATGGGCCAAGCATTCAAACACATGAGTCTATGGGGGCCGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGTTAGGAGGTATGGCCTaGTTGGAGGAAGTGTGTCGC | + |
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Preference number: 3 (lower is better) Translates to: SAVLSNGCSSRGPSLILWLGGMA*LEEVCR Trigger: GCGACACACTTCCTCCAACAAGGCCATACCTCCTAA...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATTaGACTCAGGACCTCTGGAAGAGCAGTCATTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGN*TQDLWKSSHCS Trigger: AGAGCAATGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | TCAGCTCCTTTTCCAGCACCATGTCTGTCTGCAGGCTaGCATACTTCCCACCATGATGATACTGGACTGAAT | + |
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Preference number: 3 (lower is better) Translates to: SAPFPAPCLSAG*HTSHHDDTGLN Trigger: ATTCAGTCCAGTATCATCATGGTGGGAAGTATGGCAGCCTGCAGACAGACATGGTGCTGGAAAAGGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGAAATTGAACTCAGGACCTCTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*KLNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | CCCCTTCTGGCCTCTGTGCACACTGCACACATGGAGTaGACAGATACTCATGTAGGCAAAATATTCATACAC | + |
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Preference number: 3 (lower is better) Translates to: PLLASVHTAHME*TDTHVGKIFIH Trigger: GTGTATGAATATTTTGCCTACATGAGTATCTGTGCACTCCATGTGTGCAGTGTGCACAGAGGCCAGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR GCA 72 bp | AGGAGGCTAAAGTCTCTTCTCTCCAGCAATCAGTATTaGCGAGATAACCTTGGGGAGGGACCTGCTGAATTA | + |
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Preference number: 3 (lower is better) Translates to: RRLKSLLSSNQY*RDNLGEGPAEL Trigger: TAATTCAGCAGGTCCCTCCCCAAGGTTATCTCGGCAATACTGATTGCTGGAGAGAAGAGACTTTAGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTTGGGAATGGTTCTCAGAAGCTGAACTGCTCAGACATACTGTGAGTTTGTCTAGAGGACCCAGTTaGATTCTGTGGACACACATG | + |
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Preference number: 3 (lower is better) Translates to: RLWEWFSEAELLRHTVSLSRGPS*ILWTHM Trigger: CATGTGTGTCCACAGAATCAAACTGGGTCCTCTAGA...CAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CCA 72 bp | GGGGTAATGAACTCTGGAGGTAGAATAGGGACCACTTaGACATGTGGGATGCACACAAACCAAGAAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVMNSGGRIGTT*TCGMHTNQEGF Trigger: AAATCCTTCTTGGTTTGTGTGCATCCCACATGTCCAAGTGGTCCCTATTCTACCTCCAGAGTTCATTACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR GCA 72 bp | GTAGTTCCCCATCCTTCCCCTTTGAGAAGATCTACTTaGAATGTGCACTATCTGAAGTATGCTGTGGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: VVPHPSPLRRST*NVHYLKYAVAM Trigger: CATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTAGATCTTCTCAAAGGGGAAGGATGGGGAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | GCCTTTGGTGTCTTATCTCATGTAGCACTGTGTCTTTaGAATTCATGCACCATGCAACATCTGTCAGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: AFGVLSHVALCL*NSCTMQHLSGI Trigger: GATGCCTGACAGATGTTGCATGGTGCATGAATTCCAAAGACACAGTGCTACATGAGATAAGACACCAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | CTATCAACTGATTGTAAAGGTCCCAGTTTCTTTGTACCTCAGTGGCTGCTCTTTCATAGACTCATGTGTTaGAATGCTTGGCCCATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSTDCKGPSFFVPQWLLFHRLMC*NAWPIG Trigger: CCCTATGGGCCAAGCATTCAAACACATGAGTCTATG...AAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTTGTGTTTGGCTTAATAACTGTGGTGGTTaGAATAGAAACGGCCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVIQMGRKLEPVPICVWLNNCGG*NRNGPH Trigger: ATGGGGGCCGTTTCTATTCAAACCACCACAGTTATT...AAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTTGGGAATGGTTCTCAGAAGCTGAACTGCTCAGACATACTGTGAGTTTGTATGTGAATCCATTGTaGCTCTCTTCAGACACACCA | + |
|
Preference number: 3 (lower is better) Translates to: RLWEWFSEAELLRHTVSLYVNPL*LSSDTP Trigger: TGGTGTGTCTGAAGAGAGCAACAATGGATTCACATA...CAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTTGGGAATGGTTCTCAGAAGCTGAACTGCTCAGACATACTGTGAGTTTGGGAACCTGTTCCAATTaGTGTTTGGCTTTGTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLWEWFSEAELLRHTVSLGTCSN*CLALYW Trigger: CCAATACAAAGCCAAACACAAATTGGAACAGGTTCC...CAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGTCAACTGAATGGTGTTaGTATTCAACCCTCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YLQCALSEVCCGNVTTAWSTEWC*YSTLWE Trigger: TTCCCAGAGGGTTGAATACAAACACCATTCAGTTGA...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR TCA 72 bp | CATCTTGATAACAAGGACAAGAGCTCGATCAAGCCCTaGTGTTGTTTTGCTCACCTTTGTTGCTGCAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: HLDNKDKSSIKP*CCFAHLCCCSI Trigger: GATACTGCAGCAACAAAGGTGAGCAAAACAACATCAGGGCTTGATCGAGCTCTTGTCCTTGTTATCAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTTGGGAATGGTTCTCAGAAGCTGAACTGCTCAGACATACTGTGAGTTTGATGTATGTGAATCCATaGTTGCTCTCTTCAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: RLWEWFSEAELLRHTVSLMYVNP*LLSSDT Trigger: TGTGTCTGAAGAGAGCAACAATGGATTCACATACAT...CAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR GCA 72 bp | CACTTTCCTGCTTCATGTAAGTGGAATCCTGATGTTTaGCTTTGGTGTCTTATCTCATGTAGCACTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HFPASCKWNPDV*LWCLISCSTVS Trigger: AGACACAGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGGAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | CCTGCTTCATGTAAGTGGAATCCTGATGTTTGCCTTTaGTGTCTTATCTCATGTAGCACTGTGTCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PASCKWNPDVCL*CLISCSTVSLE Trigger: TTCCAAAGACACAGTGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | GGCACTGACTATGCTTTCAGGTTTACAGTGTTTTTGTaGTCAGTGTCACCATTCATGCCCAGAACTTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GTDYAFRFTVFL*SVSPFMPRTFY Trigger: GTAAAAAGTTCTGGGCATGAATGGTGACACTGACCACAAAAACACTGTAAACCTGAAAGCATAGTCAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR TCA 72 bp | TGCTTAAGTCAGGCTTTGGGAATGGTTCTCAGAAGCTaGACTGCTCAGACATACTGTGAGTTTGTTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: CLSQALGMVLRS*TAQTYCEFVLS Trigger: AGATAAAACAAACTCACAGTATGTCTGAGCAGTTCAGCTTCTGAGAACCATTCCCAAAGCCTGACTTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR GCA 72 bp | GAGAAGATCTACTTGCAATGTGCACTATCTGAAGTATaGTGTGGCAATGTGACGACTGCATGGCTTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: EKIYLQCALSEV*CGNVTTAWLFI Trigger: AATAAAAAGCCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTAGATCTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | CTTAGGAGTCTCCCTCCAGGACGGAATGTTTTAATTTaGAGGAAATTACTATGCAGTACCACTATTCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: LRSLPPGRNVLI*RKLLCSTTILT Trigger: GGTTAGAATAGTGGTACTGCATAGTAATTTCCTCCAAATTAAAACATTCCGTCCTGGAGGGAGACTCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR TCA 72 bp | GTCACCATTCATGCCCAGAACTTTTTACACTCTTACTaGAACTTGAGTAAGTCTGTCCCTTTTCCTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VTIHAQNFLHSY*NLSKSVPFPPN Trigger: ATTTGGAGGAAAAGGGACAGACTTACTCAAGTTTCAGTAAGAGTGTAAAAAGTTCTGGGCATGAATGGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR GCA 72 bp | GGTTTACAGTGTTTTTGTGGTCAGTGTCACCATTCATaGCCAGAACTTTTTACACTCTTACTGAAACTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLQCFCGQCHHS*PELFTLLLKLE Trigger: CTCAAGTTTCAGTAAGAGTGTAAAAAGTTCTGGGCATGAATGGTGACACTGACCACAAAAACACTGTAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATTCATGCACCATGCAACATCTGTCAGGCATCTCTGTTTTTAAGGTGTTTGTGTTTGGCTTTGTATaGGTTAAAGATGAGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: WNSCTMQHLSGISVFKVFVFGFV*VKDEKQ Trigger: CTGTTTCTCATCTTTAACCAATACAAAGCCAAACAC...AAACACCTTAAAAACAGAGATGCCTGACAGATGTTGCATGGTGCATGAATTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR TCA 72 bp | TTCATGCCCAGAACTTTTTACACTCTTACTGAAACTTaGGTAAGTCTGTCCCTTTTCCTCCAAATCATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FMPRTFYTLTET*VSLSLFLQIIH Trigger: GTGAATGATTTGGAGGAAAAGGGACAGACTTACTCAAGTTTCAGTAAGAGTGTAAAAAGTTCTGGGCATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | AAAACAACAAAACAGTTATCCAAATGGGCAGGAAGCTaGAACCTGTTCCAATTTGTGTTTGGCTTTGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: KTTKQLSKWAGS*NLFQFVFGFVL Trigger: CAATACAAAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGTTTTGTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CCA 72 bp | TTCTTTCCTTCTATACACTTTCCTGCTTCATGTAAGTaGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FFPSIHFPASCK*NPDVCLWCLIS Trigger: TGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTATAGAAGGAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | GTATGGCCTTGTTGGAGGAAGTGTGTCGCTGTGGGCTaGGGAGAGCCTCCTCCAGGCTGCCTGCAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VWPCWRKCVAVG*GEPPPGCLQKT Trigger: TGTCTTCTGCAGGCAGCCTGGAGGAGGCTCTCCCAAGCCCACAGCGACACACTTCCTCCAACAAGGCCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | AGCATGCTGTCGTGGGCTGGAGAGATGAGATGGCTCAGCAGTTCTGAGCAATGGTCATGGGACCCGGGTTaGAGCCCAACACGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SMLSWAGEMRWLSSSEQWSWDPG*SPTRAP Trigger: TGGTGCGCGTGTTGGGCTGCAACCCGGGTCCCATGA...CCATTGCTCAGAACTGCTGAGCCATCTCATCTCTCCAGCCCACGACAGCATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCGAGTGTACAAAACTCTaGGAGTGGCTCCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKASSWSSPLLPVDSSGGECTKL*EWLPRS Trigger: AGACCGAGGGAGCCACTCTCAGAGTTTTGTACACTC...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | AGCATGCTGTCGTGGGCTGGAGAGATGAGATGGCTCAGCAGTTCTGAGCAATGGAGGAGTAAAGCCATGTaGTCATCAGTGTGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLSWAGEMRWLSSSEQWRSKAM*SSVWPG Trigger: TCCTGGCCACACTGATGATCACATGGCTTTACTCCT...CCATTGCTCAGAACTGCTGAGCCATCTCATCTCTCCAGCCCACGACAGCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | TCAAGTCCTGAAATTTGCTCTGTTGACCAGGCCTCTAACTCAAGAGATCCGCCTTACGTGTTGGTGCCTTaGAGGGTCATGGGACCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPEICSVDQASNSRDPPYVLVP*RVMGPG Trigger: CCCGGGTCCCATGACCCTGCAAGGCACCAACACGTA...AGGCGGATCTCTTGAGTTAGAGGCCTGGTCAACAGAGCAAATTTCAGGACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCTTAGCTTCAGCATTATaGATGACTGGGCCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKASSWSSPLLPVDSSGGLASAL*MTGPCP Trigger: AGGACATGGCCCAGTCATCCATAATGCTGAAGCTAA...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATaGAACTCAGGACCTCTGGAAGAGCAGTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWK*NSGPLEEQSLL Trigger: GAGCAATGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | GGTTTGAATAGAAACGGCCCCCATAGACTCATGTGTTaGAATGCTTGGCCCATAGGGAGTGGCACTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLNRNGPHRLMC*NAWPIGSGTIR Trigger: CCTAATAGTGCCACTCCCTATGGGCCAAGCATTCAAACACATGAGTCTATGGGGGCCGTTTCTATTCAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | GAGCTCGATCAAGCCCTGATGTTGTTTTGCTCACCTTaGTTGCTGCAGTATCTGGCACAGTCCCCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELDQALMLFCSP*LLQYLAQSPVK Trigger: TTTTACTGGGGACTGTGCCAGATACTGCAGCAACAAAGGTGAGCAAAACAACATCAGGGCTTGATCGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | ACAAGGACAAGAGCTCGATCAAGCCCTGATGTTGTTTaGCTCACCTTTGTTGCTGCAGTATCTGGCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRTRARSSPDVV*LTFVAAVSGTV Trigger: GACTGTGCCAGATACTGCAGCAACAAAGGTGAGCAAAACAACATCAGGGCTTGATCGAGCTCTTGTCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | CAACTGATTGTAAAGGTCCCAGTTTCTTTGTACCTCAGTGGCTGCTCTTTTTATGCTCACCAGTGTCAATaGGGATTCTCCTGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIVKVPVSLYLSGCSFYAHQCQ*GFSCCR Trigger: CCGGCAGCAGGAGAATCCTCATTGACACTGGTGAGC...ATAAAAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | CTTCATGTAAGTGGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCACCAGGTACGTGTTGGTaGCTTGCAGGGTCATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHVSGILMFAFGVLSHVAPGTCW*LAGSWD Trigger: GTCCCATGACCCTGCAAGGCACCAACACGTACCTGG...TGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTTGATTCTGTGGCGGCTTTCCATTTCTTaGCAGGAGTTGTTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVLSNGCSSRGPSLILWRLSIS*QELLCR Trigger: TCTACACAACAACTCCTGTCAAGAAATGGAAAGCCG...CCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAACTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | GTGCCCCTTCTGGCCTCTGTGCACACTGCACACATGGAGTGCACAGATACTCATTACAAATGTCTACAATaGCTCCAGAATGATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPLLASVHTAHMECTDTHYKCLQ*LQNDQN Trigger: ATTCTGATCATTCTGGAGGCATTGTAGACATTTGTA...ATGAGTATCTGTGCACTCCATGTGTGCAGTGTGCACAGAGGCCAGAAGGGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCATAATTTCTTCTCTCTaGGGATTCCGTCGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKASSWSSPLLPVDSSGGIISSL*GFRRSF Trigger: AAAACTTCGACGGAATCCCCAGAGAGAAGAAATTAT...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | GTTCTGAGCAATGGCTGTTCTTCTAGAGGACCCAGTTaGATTCTGTGGACACACATGGTGACTAACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSNGCSSRGPS*ILWTHMVTNTC Trigger: ACAGGTGTTAGTCACCATGTGTGTCCACAGAATCAAACTGGGTCCTCTAGAAGAACAGCCATTGCTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | CTTCATGTAAGTGGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCACTTCAGCATTATGGATaGCTGGGCCATGTCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHVSGILMFAFGVLSHVALQHYG*LGHVLD Trigger: ATCCAGGACATGGCCCAGTCATCCATAATGCTGAAG...TGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGCAGGATTTCCTGGATTaGTGTGTCAAACTCAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLQCALSEVCCGNVTTAWQDFLD*CVKLNQ Trigger: TTGGTTGAGTTTGACACAGCAATCCAGGAAATCCTG...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR GCA 90 bp | CAACTGATTGTAAAGGTCCCAGTTTCTTTGTACCTCAGTGGCTGCTCTTTTTATTCCCTTCTCCTAGGATaGAGTCCCCAGAAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLIVKVPVSLYLSGCSFYSLLLG*SPQKRW Trigger: CCATCTTTTCTGGGGACTGCATCCTAGGAGAAGGGA...ATAAAAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR CCA 90 bp | TCAAGTCCTGAAATTTGCTCTGTTGACCAGGCCTCTAACTCAAGAGATCCGCCTGACTGGGCCATGTCCTaGATATATAATGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPEICSVDQASNSRDPPDWAMS*IYNVSF Trigger: AAAGCTAACATTATATATCCAGGACATGGCCCAGTC...AGGCGGATCTCTTGAGTTAGAGGCCTGGTCAACAGAGCAAATTTCAGGACTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR CCA 90 bp | ACAAGAGGTAACAGGCATTTCACTGGTTCAGAAGGGATGATGATGGCTAGGACTAGCATTATGGATGACTaGGCCATGTCCTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TRGNRHFTGSEGMMMARTSIMDD*AMSWIY Trigger: ATATATCCAGGACATGGCCCAGTCATCCATAATGCT...AGTCCTAGCCATCATCATCCCTTCTGAACCAGTGAAATGCCTGTTACCTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | CTCTTCTCTCCAGCAATCAGTATTGCCGAGATAACCTaGGGGAGGGACCTGCTGAATTATTTAAGTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSPAISIAEIT*GRDLLNYLSFR Trigger: TCTGAAACTTAAATAATTCAGCAGGTCCCTCCCCAAGGTTATCTCGGCAATACTGATTGCTGGAGAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | AGTAGTTCCCCATCCTTCCCCTTTGAGAAGATCTACTaGCAATGTGCACTATCTGAAGTATGCTGTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSFPFEKIY*QCALSEVCCGN Trigger: ATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTAGATCTTCTCAAAGGGGAAGGATGGGGAACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTTGTTTTATCTTTCAGAAGCTGCTCTATCAACTGATTGTAAAGGTCCCACAATGCCTCCAGAATaGTCAGAATGCCAGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFYLSEAALSTDCKGPTMPPE*SECQCV Trigger: GACACACTGGCATTCTGATCATTCTGGAGGCATTGT...GGGACCTTTACAATCAGTTGATAGAGCAGCTTCTGAAAGATAAAACAAACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR CCA 90 bp | CTTCATGTAAGTGGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCAGTCACCAGGATTTCCTaGATTGCTGTGTCAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVSGILMFAFGVLSHVAVTRIS*IAVSNS Trigger: TGAGTTTGACACAGCAATCCAGGAAATCCTGGTGAC...TGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| CDS-3UTR TCA 90 bp | TGGAATTCATGCACCATGCAACATCTGTCAGGCATCTCTGTTTTTAAGGTGTTTGATATATTCTGGAACTaGTGGCTCACCAGTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNSCTMQHLSGISVFKVFDIFWN*WLTSVN Trigger: ATTGACACTGGTGAGCCATCAGTTCCAGAATATATC...AAACACCTTAAAAACAGAGATGCCTGACAGATGTTGCATGGTGCATGAATTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
||
| 3UTR CAA 72 bp | TATTACTGGCAAATGCTAACAAATAACTGTGGTGGTTaGAATAGAAACGGCCCCCATAGACTCATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YYWQMLTNNCGG*NRNGPHRLMCL Trigger: CAAACACATGAGTCTATGGGGGCCGTTTCTATTCAAACCACCACAGTTATTTGTTAGCATTTGCCAGTAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 72 bp | TATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTaGTGTTTGGCTTTGTATTGGTTAAAGATGAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: YPNGQEAGTCSN*CLALYWLKMRN Trigger: GTTTCTCATCTTTAACCAATACAAAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| 3UTR CAA 72 bp | CTGCTCTATCAACTGATTGTAAAGGTCCCAGTTTCTTaGTACCTCAGTGGCTGCTCTTTTTATTTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLYQLIVKVPVS*YLSGCSFYFQK Trigger: TTTCTGAAAATAAAAAGAGCAGCCACTGAGGTACAAAGAAACTGGGACCTTTACAATCAGTTGATAGAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS-3UTR TCA 90 bp | CAATTCTTTCCTTCTATACACTTTCCTGCTTCATGTAAGTGGAATCCTGATGTTTTCCGTTACGGTAAATaGTTTCTCAAAGTTATCACG | + |
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Preference number: 4 (lower is better) Translates to: QFFPSIHFPASCKWNPDVFRYGK*FLKVIT Trigger: CGTGATAACTTTGAGAAATCATTTACCGTAACGGAA...AACATCAGGATTCCACTTACATGAAGCAGGAAAGTGTATAGAAGGAAAGAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS GCA 90 bp | CCACCAGGTACGTGTTGGTGCCTTGCAGGGTCATGGGACCCGGGTTaGAGCCCAACACGCGCACCACCCGACTGGACAGCTGCTCGATGC | + |
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Preference number: 5 (lower is better) Translates to: PPGTCWCLAGSWDPG*SPTRAPPDWTAARC Trigger: GCATCGAGCAGCTGTCCAGTCGGGTGGTGCGCGTGTTGGGCTGCAACCCGGGTCCCATGACCCTGCAAGGCACCAACACGTACCTGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS GCA 90 bp | AGGATTCTCCTGCTGCCGGTCCCCACCAGGTACGTGTTGGTGCCTTaGAGGGTCATGGGACCCGGGTTGCAGCCCAACACGCGCACCACC | + |
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Preference number: 5 (lower is better) Translates to: RILLLPVPTRYVLVP*RVMGPGLQPNTRTT Trigger: GGTGGTGCGCGTGTTGGGCTGCAACCCGGGTCCCATGACCCTGCAAGGCACCAACACGTACCTGGTGGGGACCGGCAGCAGGAGAATCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS-3UTR CAA 90 bp | TACTTGCAATGTGCACTATCTGAAGTATGCTGTGGCAATGTGACGACTGCATGGGTACGTGTTGGTGCCTaGCAGGGTCATGGGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: YLQCALSEVCCGNVTTAWVRVGA*QGHGTR Trigger: CCGGGTCCCATGACCCTGCAAGGCACCAACACGTAC...CCATGCAGTCGTCACATTGCCACAGCATACTTCAGATAGTGCACATTGCAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS-3UTR CAA 90 bp | CTTCATGTAAGTGGAATCCTGATGTTTGCCTTTGGTGTCTTATCTCATGTAGCAGTCATGGGACCCGGGTaGCAGCCCAACACGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: LHVSGILMFAFGVLSHVAVMGPG*QPNTRT Trigger: GGTGCGCGTGTTGGGCTGCAACCCGGGTCCCATGAC...TGCTACATGAGATAAGACACCAAAGGCAAACATCAGGATTCCACTTACATGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS-3UTR CAA 90 bp | GGAAAGGCATCTTCCTGGAGCTCTCCTCTATTACCTGTAGACAGCTCAGGAGGCCCAGGATTTCCTGGATaGCTGTGTCAAACTCAACCA | + |
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Preference number: 5 (lower is better) Translates to: GKASSWSSPLLPVDSSGGPGFPG*LCQTQP Trigger: TGGTTGAGTTTGACACAGCAATCCAGGAAATCCTGG...GCCTCCTGAGCTGTCTACAGGTAATAGAGGAGAGCTCCAGGAAGATGCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS GCA 90 bp | TATAATCATAGAGGTCTTCAAATATTGTCGTCCCTTCTCCTAGGATaGAGTCCCCAGAAAAGATGGCATTCTCCTCCTCCAGGAGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: YNHRGLQILSSLLLG*SPQKRWHSPPPGVK Trigger: CTTTACTCCTGGAGGAGGAGAATGCCATCTTTTCTGGGGACTGCATCCTAGGAGAAGGGACGACAATATTTGAAGACCTCTATGATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS-3UTR CAA 90 bp | ACAGTTATCCAAATGGGCAGGAAGCTGGAACCTGTTCCAATTTGTGTTTGGCTTAGAGGTCTTCAAATATaGTCGTCCCTTCTCCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TVIQMGRKLEPVPICVWLRGLQI*SSLLLG Trigger: TCCTAGGAGAAGGGACGACAATATTTGAAGACCTCT...AAGCCAAACACAAATTGGAACAGGTTCCAGCTTCCTGCCCATTTGGATAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS CCA 72 bp | GACCCGGGTTGCAGCCCAACACGCGCACCACCCGACTaGACAGCTGCTCGATGCGCTGCAGAGCGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: DPGCSPTRAPPD*TAARCAAERQP Trigger: TGGCTGCCGCTCTGCAGCGCATCGAGCAGCTGTCCAGTCGGGTGGTGCGCGTGTTGGGCTGCAACCCGGGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS GCA 72 bp | CTGCTGCCGGTCCCCACCAGGTACGTGTTGGTGCCTTaGAGGGTCATGGGACCCGGGTTGCAGCCCAACACG | + |
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Preference number: 6 (lower is better) Translates to: LLPVPTRYVLVP*RVMGPGLQPNT Trigger: CGTGTTGGGCTGCAACCCGGGTCCCATGACCCTGCAAGGCACCAACACGTACCTGGTGGGGACCGGCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS GCA 72 bp | TTCTCCTGCTGCCGGTCCCCACCAGGTACGTGTTGGTaGCTTGCAGGGTCATGGGACCCGGGTTGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: FSCCRSPPGTCW*LAGSWDPGCSP Trigger: TGGGCTGCAACCCGGGTCCCATGACCCTGCAAGGCACCAACACGTACCTGGTGGGGACCGGCAGCAGGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS CAA 90 bp | GTGTCAATGAGGATTCTCCTGCTGCCGGTCCCCACCAGGTACGTGTaGGTGCCTTGCAGGGTCATGGGACCCGGGTTGCAGCCCAACACG | + |
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Preference number: 6 (lower is better) Translates to: VSMRILLLPVPTRYV*VPCRVMGPGLQPNT Trigger: CGTGTTGGGCTGCAACCCGGGTCCCATGACCCTGCAAGGCACCAACACGTACCTGGTGGGGACCGGCAGCAGGAGAATCCTCATTGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS CAA 90 bp | GGCTCCCTCGGTCTTAACCACGTCTCCGTTTTCTATATAAATAAATaGCTGTTCTCCATTTCCTATAATTTCTTCTCTCTGGGGATTCCG | + |
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Preference number: 6 (lower is better) Translates to: GSLGLNHVSVFYINK*LFSISYNFFSLGIP Trigger: CGGAATCCCCAGAGAGAAGAAATTATAGGAAATGGAGAACAGCAATTTATTTATATAGAAAACGGAGACGTGGTTAAGACCGAGGGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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| CDS CCA 72 bp | ATATTCCAGAATTTTAGCTTCAGCATTATGGATGACTaGGCCATGTCCTGGATATATAATGTTAGCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: IFQNFSFSIMDD*AMSWIYNVSFD Trigger: ATCAAAGCTAACATTATATATCCAGGACATGGCCCAGTCATCCATAATGCTGAAGCTAAAATTCTGGAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027071.7 |
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