Pregenerated sensors for LACTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032370Ensembl transcript IDs: ENSMUST00000034929.7, ENSMUST00000215172.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCCTCTGAGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTaGCACCCACAGCACCTCCAGTATGTGAGGCGTAGTGCCGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RPLSPVLQEGPAGHY*HPQHLQYVRRSAAA Trigger: AGCAGCGGCACTACGCCTCACATACTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR GCA 90 bp | CACCCACAGCACCTCCAGTATGTGAGGCGTAGTGCCGCTGCTTCCTaGAGGATCCGTACGTTTGCTTCTTCTCTACCACACCCCACGCCA | + |
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Preference number: 1 (lower is better) Translates to: HPQHLQYVRRSAAAS*RIRTFASSLPHPTP Trigger: TGGCGTGGGGTGTGGTAGAGAAGAAGCAAACGTACGGATCCTGCAGGAAGCAGCGGCACTACGCCTCACATACTGGAGGTGCTGTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR TCA 90 bp | AAGGACCAGCAGGACACTACTGGCACCCACAGCACCTCCAGTATGTaGGGCGTAGTGCCGCTGCTTCCTGCAGGATCCGTACGTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: KDQQDTTGTHSTSSM*GVVPLLPAGSVRLL Trigger: AAGCAAACGTACGGATCCTGCAGGAAGCAGCGGCACTACGCCTCACATACTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR TCA 90 bp | AGAGACGATTATTCCTCGTGGGGGAACCTTGTTATTTACGGCCTCTaGGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTGGCACC | + |
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Preference number: 1 (lower is better) Translates to: RDDYSSWGNLVIYGL*VQFFRKDQQDTTGT Trigger: GGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGCCGTAAATAACAAGGTTCCCCCACGAGGAATAATCGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR GCA 90 bp | GCAGGATCCGTACGTTTGCTTCTTCTCTACCACACCCCACGCCATTaGATATTTCCCCTCTTTATCCCAGGACATCTCTGTGTTAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: AGSVRLLLLYHTPRH*IFPLFIPGHLCVRD Trigger: GTCCCTAACACAGAGATGTCCTGGGATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTGGTAGAGAAGAAGCAAACGTACGGATCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR GCA 90 bp | AATTCCAGAGCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTaGATGTTGCATATGATAGAGACGATTATTCCTCGTGGGGGAACC | + |
|
Preference number: 1 (lower is better) Translates to: NSRAIFKAVLLSPTD*MLHMIETIIPRGGT Trigger: GGTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCTGGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CCA 90 bp | TGCATATTTCCCCTCTTTATCCCAGGACATCTCTGTGTTAGGGACTaGGGTCCACATCATCACCATTGTTTCTGGCTTGAGATATCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: CIFPLFIPGHLCVRD*GPHHHHCFWLEISR Trigger: CCTGGATATCTCAAGCCAGAAACAATGGTGATGATGTGGACCCCAGTCCCTAACACAGAGATGTCCTGGGATAAAGAGGGGAAATATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CCA 90 bp | TTATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTaGGAACGTCAACATTTCAAAGAATGGAAGGCTCACTGTGGACCT | + |
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Preference number: 1 (lower is better) Translates to: LCIWERNVSLKGLCI*ERQHFKEWKAHCGP Trigger: AGGTCCACAGTGAGCCTTCCATTCTTTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACAGACTGCATGTTGCATATGATAGAGACGATTATTCCTCGTGGGGGAACCAGGATCCGTACGTTTaGTTCTTCTCTACCACACCC | + |
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Preference number: 2 (lower is better) Translates to: PHRLHVAYDRDDYSSWGNQDPYV*FFSTTP Trigger: GGGTGTGGTAGAGAAGAAGCAAACGTACGGATCCTG...GTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGCCCCACAGACTGCATGTTGCATATGATAGAGACGATTATTCCTCGTGGGCTCTGTGTTAGGGACTaGGGTCCACATCATCACCAT | + |
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Preference number: 2 (lower is better) Translates to: LSPTDCMLHMIETIIPRGLCVRD*GPHHHH Trigger: ATGGTGATGATGTGGACCCCAGTCCCTAACACAGAG...CCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTGCATGTTGCATATGCACACCCCACGCCATTaGATATTTCCCCTCTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: RAIFKAVLLSPTDCMLHMHTPRH*IFPLFI Trigger: GATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTG...CATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CAA 90 bp | AGAGCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTGCATGTaGCATATGATAGAGACGATTATTCCTCGTGGGGGAACCTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RAIFKAVLLSPTDCM*HMIETIIPRGGTLL Trigger: TAACAAGGTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGACCTGTGCTGCCATTAGGATTAGTCAGCTCTGTCTTTATCAAATTCCAGGTTATTTACGGCCTCTaGGTCCAGTTCTTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CGPVLPLGLVSSVFIKFQVIYGL*VQFFRK Trigger: CTTCCTGAAGAACTGGACTCAGAGGCCGTAAATAAC...CTGGAATTTGATAAAGACAGAGCTGACTAATCCTAATGGCAGCACAGGTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGCATATGATAGAGACGATTATTCCTCGTGGGGGAACCTTGTTATTTACGATGGAAGGCTCACTGTaGACCTGTGCTGCCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: MLHMIETIIPRGGTLLFTMEGSL*TCAAIR Trigger: CCTAATGGCAGCACAGGTCCACAGTGAGCCTTCCAT...CGTAAATAACAAGGTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCCAGAGCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTGCATGTTGCAACATTTCAAAGAATaGAAGGCTCACTGTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: NSRAIFKAVLLSPTDCMLQHFKE*KAHCGP Trigger: AGGTCCACAGTGAGCCTTCCATTCTTTGAAATGTTG...CAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCTGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CAA 90 bp | TCTGTGTTAGGGACTGGGGTCCACATCATCACCATTGTTTCTGGCTaGAGATATCCAGGCAAGAGATTTTCATTTGAGTTCTTAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: SVLGTGVHIITIVSG*RYPGKRFSFEFLNC Trigger: GCAGTTTAAGAACTCAAATGAAAATCTCTTGCCTGGATATCTCAAGCCAGAAACAATGGTGATGATGTGGACCCCAGTCCCTAACACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CAA 90 bp | GCTCTGTCTTTATCAAATTCCAGAGCGATCTTCAAAGCAGTGCTATaGAGCCCCACAGACTGCATGTTGCATATGATAGAGACGATTATT | + |
|
Preference number: 2 (lower is better) Translates to: ALSLSNSRAIFKAVL*SPTDCMLHMIETII Trigger: AATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCTGGAATTTGATAAAGACAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAAATGGAAGGCTCACTGTaGACCTGTGCTGCCATTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GTKCILKGFMYLGTSTFQMEGSL*TCAAIR Trigger: CCTAATGGCAGCACAGGTCCACAGTGAGCCTTCCAT...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| 3UTR CAA 90 bp | TTTATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTaGGGAACGTCAACATTTCAAAGAATGGAAGGCTCACTGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: FMYLGTKCILKGFMY*GTSTFQRMEGSLWT Trigger: GGTCCACAGTGAGCCTTCCATTCTTTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| 3UTR GCA 72 bp | CACCTCCAGTATGTGAGGCGTAGTGCCGCTGCTTCCTaGAGGATCCGTACGTTTGCTTCTTCTCTACCACAC | + |
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Preference number: 3 (lower is better) Translates to: HLQYVRRSAAAS*RIRTFASSLPH Trigger: GTGTGGTAGAGAAGAAGCAAACGTACGGATCCTGCAGGAAGCAGCGGCACTACGCCTCACATACTGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CCA 72 bp | AGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTaGCACCCACAGCACCTCCAGTATGTGAGGCGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPVLQEGPAGHY*HPQHLQYVRRS Trigger: ACTACGCCTCACATACTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR TCA 72 bp | TATTCCTCGTGGGGGAACCTTGTTATTTACGGCCTCTaGGTCCAGTTCTTCAGGAAGGACCAGCAGGACACT | + |
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Preference number: 3 (lower is better) Translates to: YSSWGNLVIYGL*VQFFRKDQQDT Trigger: AGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGCCGTAAATAACAAGGTTCCCCCACGAGGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CCA 72 bp | CCCCTCTTTATCCCAGGACATCTCTGTGTTAGGGACTaGGGTCCACATCATCACCATTGTTTCTGGCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PLFIPGHLCVRD*GPHHHHCFWLE Trigger: CTCAAGCCAGAAACAATGGTGATGATGTGGACCCCAGTCCCTAACACAGAGATGTCCTGGGATAAAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR GCA 72 bp | GTACGTTTGCTTCTTCTCTACCACACCCCACGCCATTaGATATTTCCCCTCTTTATCCCAGGACATCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VRLLLLYHTPRH*IFPLFIPGHLC Trigger: ACAGAGATGTCCTGGGATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTGGTAGAGAAGAAGCAAACGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CCA 72 bp | GGAACGTCAACATTTCAAAGAATGGAAGGCTCACTGTaGACCTGTGCTGCCATTAGGATTAGTCAGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GTSTFQRMEGSL*TCAAIRISQLC Trigger: ACAGAGCTGACTAATCCTAATGGCAGCACAGGTCCACAGTGAGCCTTCCATTCTTTGAAATGTTGACGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR GCA 72 bp | GCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTaGATGTTGCATATGATAGAGACGATTATTCCTCGT | + |
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Preference number: 3 (lower is better) Translates to: AIFKAVLLSPTD*MLHMIETIIPR Trigger: ACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCTACCACACCCCACGCCATTGCATATTTCCCCTCTTTATCCCAGGACAGGCTGGGCCTGCGGTaGCCGCAGCCCGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: FFSTTPHAIAYFPSLSQDRLGLR*PQPELS Trigger: TGACAGCTCGGGCTGCGGCCACCGCAGGCCCAGCCT...GTCCTGGGATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTGGTAGAGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTGAGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTGGCACCCACAAGTCATTCTTTTTCTTaGCTGGCTTCGCGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ASESSSSGRTSRTLLAPTSHSFS*LASRCG Trigger: GCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACT...TGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTAGGCTGGGCCTGCGGTaGCCGCAGCCCGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFRLGLR*PQPELS Trigger: TGACAGCTCGGGCTGCGGCCACCGCAGGCCCAGCCT...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAACTCTGGAGAAGCCCCTaGCTGCTGGCGGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQLWRSP*LLAAQA Trigger: CGCCTGCGCCGCCAGCAGCCAGGGGCTTCTCCAGAG...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCTCTGGAGAAGCCCCTaGCTGCTGGCGGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFLWRSP*LLAAQA Trigger: CGCCTGCGCCGCCAGCAGCCAGGGGCTTCTCCAGAG...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | AATTCCAGAGCGATCTTCAAAGCAGTGCTATTGAGCCCCACAGACTGCATGTTGTCTCATGACCGTTTCTaGCTTACAGGGTACGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: NSRAIFKAVLLSPTDCMLSHDRF*LTGYAV Trigger: AACCGCGTACCCTGTAAGCCAGAAACGGTCATGAGA...CAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCTGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCTCTACCACACCCCACGCCATTGCATATTTCCCCTCTTTATCCCAGGACGCTTTTGCTGATGCTTaGGATTCTCATGACCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FFSTTPHAIAYFPSLSQDAFADA*DSHDRF Trigger: GAAACGGTCATGAGAATCGCAAGCATCAGCAAAAGC...GTCCTGGGATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTGGTAGAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR TCA 90 bp | TGTGGACCTGTGCTGCCATTAGGATTAGTCAGCTCTGTCTTTATCAAATTCCAGTGCTTGCGATTCTCATaGCCGTTTCTGGCTTACAGG | + |
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Preference number: 4 (lower is better) Translates to: CGPVLPLGLVSSVFIKFQCLRFS*PFLAYR Trigger: CCTGTAAGCCAGAAACGGTCATGAGAATCGCAAGCA...CTGGAATTTGATAAAGACAGAGCTGACTAATCCTAATGGCAGCACAGGTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR GCA 90 bp | ATTAGTCAGCTCTGTCTTTATCAAATTCCAGAGCGATCTTCAAAGCAGTGCTATGTAGCAGATCGCGGCTaGTCTCGATGGCTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ISQLCLYQIPERSSKQCYVADRG*SRWLWR Trigger: TCTCCAGAGCCATCGAGAGCAGCCGCGATCTGCTAC...ATAGCACTGCTTTGAAGATCGCTCTGGAATTTGATAAAGACAGAGCTGACTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCCAGCAGGACACTACTaGCACCCACAGCACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFPAGHY*HPQHLQ Trigger: CTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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| 3UTR CAA 72 bp | TTCAAAGCAGTGCTATTGAGCCCCACAGACTGCATGTaGCATATGATAGAGACGATTATTCCTCGTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FKAVLLSPTDCM*HMIETIIPRGG Trigger: TCCCCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCATGCTCTCGATGGCTCTaGAGAAGCCCCTGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSCSRWL*RSPWLL Trigger: CAGCAGCCAGGGGCTTCTCCAGAGCCATCGAGAGCA...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | CACATCATCACCATTGTTTCTGGCTTGAGATATCCAGGCAAGAGATTTTCATTTGGAGGTCACCCACTGTaGACAGAAATCCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: HIITIVSGLRYPGKRFSFGGHPL*TEIHHQ Trigger: CTGGTGGTGGATTTCTGTCCACAGTGGGTGACCTCC...AAATGAAAATCTCTTGCCTGGATATCTCAAGCCAGAAACAATGGTGATGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| 3UTR CAA 72 bp | GGGACTGGGGTCCACATCATCACCATTGTTTCTGGCTaGAGATATCCAGGCAAGAGATTTTCATTTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GTGVHIITIVSG*RYPGKRFSFEF Trigger: GAACTCAAATGAAAATCTCTTGCCTGGATATCTCAAGCCAGAAACAATGGTGATGATGTGGACCCCAGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCGTGGGGGAACCTTGTTATTTACGGCCTCTGAGTCCAGTTCTTCAGGAATTAGTAATCTTGTTGTaGCAGAAACCTTTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: FLVGEPCYLRPLSPVLQELVILL*QKPFHP Trigger: AGGGTGAAAAGGTTTCTGTCACAACAAGATTACTAA...TTCCTGAAGAACTGGACTCAGAGGCCGTAAATAACAAGGTTCCCCCACGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR GCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTGTAGCAGATCGCGGCTaGTCTCGATGGCTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFVADRG*SRWLWR Trigger: TCTCCAGAGCCATCGAGAGCAGCCGCGATCTGCTAC...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGCATATGATAGAGACGATTATTCCTCGTGGGGGAACCTTGTTATTTACGATTCTTTTTCTTGCCTaGCTTCGCGCTGCGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: MLHMIETIIPRGGTLLFTILFLA*LRAAAS Trigger: AGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAAT...CGTAAATAACAAGGTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TGTGGACCTGTGCTGCCATTAGGATTAGTCAGCTCTGTCTTTATCAAATTCCAGCTCGTATTCTTTTTCTaGGAACTCGGGAACATAGTG | + |
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Preference number: 4 (lower is better) Translates to: CGPVLPLGLVSSVFIKFQLVFFF*ELGNIV Trigger: CACTATGTTCCCGAGTTCCCAGAAAAAGAATACGAG...CTGGAATTTGATAAAGACAGAGCTGACTAATCCTAATGGCAGCACAGGTCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGATTAGTCAGCTCTGTCTTTATCAAATTCCAGAGCGATCTTCAAAGCAGTTTTTCTTGGTCAGATaGTGGCGGGGTCCCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: IRISQLCLYQIPERSSKQFFLVR*WRGPFH Trigger: GTGAAAGGGACCCCGCCACCATCTGACCAAGAAAAA...CTGCTTTGAAGATCGCTCTGGAATTTGATAAAGACAGAGCTGACTAATCCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS-3UTR CCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAAGGAGGTCACCCACTGTaGACAGAAATCCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQGGHPL*TEIHHQ Trigger: CTGGTGGTGGATTTCTGTCCACAGTGGGTGACCTCC...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS-3UTR TCA 90 bp | TGGACCTGTGCTGCCATTAGGATTAGTCAGCTCTGTCTTTATCAAATTCCAGAGCCACGTAAGGTGTGTTaGCAAGACGTTTCTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WTCAAIRISQLCLYQIPEPRKVC*QDVSFY Trigger: ATAAAAAGAAACGTCTTGTCAACACACCTTACGTGG...CTCTGGAATTTGATAAAGACAGAGCTGACTAATCCTAATGGCAGCACAGGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCTCAAAGCAGTGCTATTaGGCCCCACAGACTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFSKQCY*APQTAC Trigger: ACATGCAGTCTGTGGGGCTCAATAGCACTGCTTTGA...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR GCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAACAGATCCAGCTTCCCTaGTTCCCACAGTTTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQQIQLP*FPQFSQ Trigger: CTGGCTAAACTGTGGGAAGCAGGGAAGCTGGATCTG...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR GCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAAGTCATTCTTTTTCTTaGCTGGCTTCGCGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSSHSFS*LASRCG Trigger: GCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACT...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCAGGATCCGTACGTTTaGTTCTTCTCTACCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFQDPYV*FFSTTP Trigger: GGGTGTGGTAGAGAAGAAGCAAACGTACGGATCCTG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCTCTCATGACCGTTTCTaGCTTACAGGGTACGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFSHDRF*LTGYAV Trigger: AACCGCGTACCCTGTAAGCCAGAAACGGTCATGAGA...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTGGCTCGTTTTCCTCCTaGACAGTTGTCAGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFGSFSS*TVVSMS Trigger: GGACATGCTGACAACTGTCCAGGAGGAAAACGAGCC...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR TCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCATGCTTGCGATTCTCATaGCCGTTTCTGGCTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSCLRFS*PFLAYR Trigger: CCTGTAAGCCAGAAACGGTCATGAGAATCGCAAGCA...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCATTTTTCTTGGTCAGATaGTGGCGGGGTCCCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSFFLVR*WRGPFH Trigger: GTGAAAGGGACCCCGCCACCATCTGACCAAGAAAAA...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAATTCTTTTTCTTGCCTaGCTTCGCGCTGCGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSILFLA*LRAAAS Trigger: AGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAAT...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACTCTGTGTTAGGGACTaGGGTCCACATCATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQLCVRD*GPHHHH Trigger: ATGGTGATGATGTGGACCCCAGTCCCTAACACAGAG...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR TCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAAGTTATTTACGGCCTCTaGGTCCAGTTCTTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQVIYGL*VQFFRK Trigger: CTTCCTGAAGAACTGGACTCAGAGGCCGTAAATAAC...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR GCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCGCTTTTGCTGATGCTTaGGATTCTCATGACCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFAFADA*DSHDRF Trigger: GAAACGGTCATGAGAATCGCAAGCATCAGCAAAAGC...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACACACCCCACGCCATTaGATATTTCCCCTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQHTPRH*IFPLFI Trigger: GATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTG...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAAGCTCTTTCTACTATaGCTGCCAGCAGAGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFKLFLL*LPAEYS Trigger: GCTATACTCTGCTGGCAGCCATAGTAGAAAGAGCTT...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR GCA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCATTGAGCCCCACAGACTaGATGTTGCATATGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MYLGTKCILKGFMYLGTSLSPTD*MLHMIE Trigger: CTCTATCATATGCAACATGCAGTCTGTGGGGCTCAA...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAATCTGTTGTAAATCACTaGCTCGTTTTCCTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQSVVNH*LVFLLD Trigger: GTCCAGGAGGAAAACGAGCCAGTGATTTACAACAGA...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR TCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCCACGTAAGGTGTGTTaGCAAGACGTTTCTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFPRKVC*QDVSFY Trigger: ATAAAAAGAAACGTCTTGTCAACACACCTTACGTGG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR GCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAAGTAGCCATACAGCATTaGGTTTCCAAATTTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQVAIQH*VSKFQE Trigger: CTCCTGAAATTTGGAAACGCAATGCTGTATGGCTAC...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAACTCGTATTCTTTTTCTaGGAACTCGGGAACATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQLVFFF*ELGNIV Trigger: CACTATGTTCCCGAGTTCCCAGAAAAAGAATACGAG...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCATCACCATTGTTTCTaGCTTGAGATATCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFHHHCF*LEISRQ Trigger: TTGCCTGGATATCTCAAGCCAGAAACAATGGTGATG...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CCA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAAGACGATTATTCCTCGTaGGGGAACCTTGTTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTKCILKGFMYLGTSTFQDDYSS*GNLVIY Trigger: GTAAATAACAAGGTTCCCCCACGAGGAATAATCGTC...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| 3UTR CAA 72 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTaGGGAACGTCAACATTTCAAAGAATGGAAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTKCILKGFMY*GTSTFQRMEGS Trigger: TGAGCCTTCCATTCTTTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAGTATAGCCAAACGTTaGATACAAAAACTGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: WERNVSLKGLCIWERQHFSIAKR*IQKLTT Trigger: GGTAGTCAGTTTTTGTATTCAACGTTTGGCTATACT...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR TCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAATTAGTAATCTTGTTGTaGCAGAAACCTTTTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQLVILL*QKPFHP Trigger: AGGGTGAAAAGGTTTCTGTCACAACAAGATTACTAA...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACAAGAGATTTTCATTTaGGTTCTTAAACTGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CIWERNVSLKGLCIWERQQEIFI*VLKLPN Trigger: GTTGGGCAGTTTAAGAACTCAAATGAAAATCTCTTG...TTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTGTACACGTAAAATCTTaGTCTGTTGTAAATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTKCILKGFMYLGTSTFVHVKS*SVVNHW Trigger: CCAGTGATTTACAACAGAGCAAGATTTTACGTGTAC...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS CCA 90 bp | GTTCGAAGTCATTCTTTTTCTTGCCTGGCTTCGCGCTGCGGCATCTaGCTTCGCTGTCCTGCTCGACTTTGGCTTTCGGTGCGTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRSHSFSCLASRCGI*LRCPARLWLSVRRS Trigger: AGAGCGACGCACCGAAAGCCAAAGTCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CAA 90 bp | CGGCCTCTGAGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTGGCACCCAACCATGGTGAGGCTTTaGCTGATGCTTGCGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSPVLQEGPAGHYWHPTMVRL*LMLAIL Trigger: GAGAATCGCAAGCATCAGCAAAAGCCTCACCATGGT...TGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
||
| CDS GCA 90 bp | ATTCGCCTTGTTCGAAGTCATTCTTTTTCTTGCCTGGCTTCGCGCTaGGGCATCTGGCTTCGCTGTCCTGCTCGACTTTGGCTTTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRLVRSHSFSCLASR*GIWLRCPARLWLSV Trigger: CACCGAAAGCCAAAGTCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGAGTCCAGTTCTTCAGGAAGGACCAGCAGGACACTACTGGCACCCACATTTCAGTTCTTTTTCTaGGTCAGATGGTGGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASESSSSGRTSRTLLAPTFQFFF*VRWWRG Trigger: ACCCCGCCACCATCTGACCAAGAAAAAGAACTGAAA...TGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAAGAACTGGACTCAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
||
| CDS GCA 90 bp | TTTCTTTCAAATACAATTCGCCTTGTTCGAAGTCATTCTTTTTCTTaGCTGGCTTCGCGCTGCGGCATCTGGCTTCGCTGTCCTGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSNTIRLVRSHSFS*LASRCGIWLRCPAR Trigger: TCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTATTTGAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS CCA 90 bp | TTTCAAATACAATTCGCCTTGTTCGAAGTCATTCTTTTTCTTGCCTaGCTTCGCGCTGCGGCATCTGGCTTCGCTGTCCTGCTCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FQIQFALFEVILFLA*LRAAASGFAVLLDF Trigger: AAAGTCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTATTTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCCTCGTGGGGGAACCTaGTTATTTACGGCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WERNVSLKGLCIWERQHFPRGGT*LFTASE Trigger: CTCAGAGGCCGTAAATAACAAGGTTCCCCCACGAGG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCACCATGGTGAGGCTTTaGCTGATGCTTGCGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WERNVSLKGLCIWERQHFTMVRL*LMLAIL Trigger: GAGAATCGCAAGCATCAGCAAAAGCCTCACCATGGT...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCCACACCCCACGCCATaGCATATTTCCCCTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WERNVSLKGLCIWERQHFPHPTP*HISPLY Trigger: ATAAAGAGGGGAAATATGCAATGGCGTGGGGTGTGG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS TCA 90 bp | ATCCACCACCAGCCCATTTATAGGAGTTATCCACGTAAGGTGTGTTaGCAAGACGTTTCTTTTTATTGTACACGTAAAATCTTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IHHQPIYRSYPRKVC*QDVSFYCTRKILLC Trigger: ACAGAGCAAGATTTTACGTGTACAATAAAAAGAAACGTCTTGTCAACACACCTTACGTGGATAACTCCTATAAATGGGCTGGTGGTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTTTTCAGTTCTTTTTCTaGGTCAGATGGTGGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGTKCILKGFMYLGTSTFFQFFF*VRWWRG Trigger: ACCCCGCCACCATCTGACCAAGAAAAAGAACTGAAA...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCGGTAGCCATACAGCATaGCGTTTCCAAATTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WERNVSLKGLCIWERQHFGSHTA*RFQISG Trigger: TCCTGAAATTTGGAAACGCAATGCTGTATGGCTACC...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAACTTAAACTGCCCAACTaGGTAGCCATACAGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTKCILKGFMYLGTSTFQLKLPN*VAIQHC Trigger: GCAATGCTGTATGGCTACCAAGTTGGGCAGTTTAAG...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCCCCACAGACTGCATGTaGCATATGATAGAGACGATT | + |
|
Preference number: 5 (lower is better) Translates to: WERNVSLKGLCIWERQHFPTDCM*HMIETI Trigger: AATCGTCTCTATCATATGCAACATGCAGTCTGTGGG...GAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAATTTCCTCCTGGACAGTaGTCAGCATGTCCAAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTKCILKGFMYLGTSTFQFPPGQ*SACPNH Trigger: ATGATTTGGACATGCTGACAACTGTCCAGGAGGAAA...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS-3UTR CAA 90 bp | ATGTATTTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACCATTGTTTCTGGCTaGAGATATCCAGGCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MYLGTKCILKGFMYLGTSTIVSG*RYPGKR Trigger: TCTCTTGCCTGGATATCTCAAGCCAGAAACAATGGT...TGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAAATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
||
| CDS TCA 90 bp | ATCCACCACCAGCCCATTTATAGGAGTTATCCACGTAAGGTGTGTTaGCAAGACGTTTCTTTTTATTGTACACGTAAAATCAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHHQPIYRSYPRKVC*QDVSFYCTRKIRFK Trigger: TTTAAACCTGATTTTACGTGTACAATAAAAAGAAACGTCTTGTCAACACACCTTACGTGGATAACTCCTATAAATGGGCTGGTGGTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215172.2 |
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| CDS CCA 90 bp | TCTGCATATAATCCAAATATTTATATCCTGAAGCTCTTTCTACTATaGCTGCCAGCAGAGTATAGCCAAACGTTGAATACAAAAACTGAC | + |
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Preference number: 5 (lower is better) Translates to: SAYNPNIYILKLFLL*LPAEYSQTLNTKTD Trigger: GTCAGTTTTTGTATTCAACGTTTGGCTATACTCTGCTGGCAGCCATAGTAGAAAGAGCTTCAGGATATAAATATTTGGATTATATGCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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| CDS-3UTR CAA 90 bp | TTGGGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTGAGTATAGCCAAACGTaGAATACAAAAACTGACTAC | + |
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Preference number: 5 (lower is better) Translates to: LGTKCILKGFMYLGTSTFEYSQT*NTKTDY Trigger: GTAGTCAGTTTTTGTATTCAACGTTTGGCTATACTC...AAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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| CDS-3UTR CAA 90 bp | GGAACGAAATGTATCCTTAAAGGGTTTATGTATTTGGGAACGTCAACATTTCAATGTACACGTAAAATCTaGCTCTGTTGTAAATCACTG | + |
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Preference number: 5 (lower is better) Translates to: GTKCILKGFMYLGTSTFQCTRKI*LCCKSL Trigger: CAGTGATTTACAACAGAGCAAGATTTTACGTGTACA...TTGAAATGTTGACGTTCCCAAATACATAAACCCTTTAAGGATACATTTCGTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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| CDS GCA 72 bp | GGCGTGTGCGGGCTCCCCGGGCTCAGGGCCTGCTCGTaGGATAACTCGGTAGTGCCGGACGCCTCGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GVCGLPGLRACS*DNSVVPDASGS Trigger: GGACCCCGAGGCGTCCGGCACTACCGAGTTATCGCACGAGCAGGCCCTGAGCCCGGGGAGCCCGCACACGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS GCA 72 bp | GGCGCAGGCGTGTGCGGGCTCCCCGGGCTCAGGGCCTaGTCGTGCGATAACTCGGTAGTGCCGGACGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GAGVCGLPGLRA*SCDNSVVPDAS Trigger: CGAGGCGTCCGGCACTACCGAGTTATCGCACGAGCAGGCCCTGAGCCCGGGGAGCCCGCACACGCCTGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CCA 72 bp | TCCGGTGTAGCAGATCGCGGCTGCTCTCGATGGCTCTaGAGAAGCCCCTGGCTGCTGGCGGCGCAGGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: SGVADRGCSRWL*RSPWLLAAQAC Trigger: ACACGCCTGCGCCGCCAGCAGCCAGGGGCTTCTCCAGAGCCATCGAGAGCAGCCGCGATCTGCTACACCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS TCA 72 bp | CTCCAACCACGATGCCGGGGGCACCAACCTCATCCTTaGTCCGGTGTAGCAGATCGCGGCTGCTCTCGATGG | + |
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Preference number: 6 (lower is better) Translates to: LQPRCRGHQPHP*SGVADRGCSRW Trigger: CCATCGAGAGCAGCCGCGATCTGCTACACCGGATCAAGGATGAGGTTGGTGCCCCCGGCATCGTGGTTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CCA 72 bp | CATTCTTTTTCTTGCCTGGCTTCGCGCTGCGGCATCTaGCTTCGCTGTCCTGCTCGACTTTGGCTTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: HSFSCLASRCGI*LRCPARLWLSV Trigger: CACCGAAAGCCAAAGTCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS GCA 72 bp | GTTCGAAGTCATTCTTTTTCTTGCCTGGCTTCGCGCTaGGGCATCTGGCTTCGCTGTCCTGCTCGACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRSHSFSCLASR*GIWLRCPARLW Trigger: CCAAAGTCGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CCA 72 bp | CAATTCGCCTTGTTCGAAGTCATTCTTTTTCTTGCCTaGCTTCGCGCTGCGGCATCTGGCTTCGCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QFALFEVILFLA*LRAAASGFAVL Trigger: CAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CAA 72 bp | TCCCACAGTTTAGCCAGAGCCACCATGGTGAGGCTTTaGCTGATGCTTGCGATTCTCATGACCGTTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SHSLARATMVRL*LMLAILMTVSG Trigger: GCCAGAAACGGTCATGAGAATCGCAAGCATCAGCAAAAGCCTCACCATGGTGGCTCTGGCTAAACTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CAA 90 bp | TTCCCTGCTTCCCACAGTTTAGCCAGAGCCACCATGGTGAGGCTTTaGCTGATGCTTGCGATTCTCATGACCGTTTCTGGCTTACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: FPASHSLARATMVRL*LMLAILMTVSGLQG Trigger: ACCCTGTAAGCCAGAAACGGTCATGAGAATCGCAAGCATCAGCAAAAGCCTCACCATGGTGGCTCTGGCTAAACTGTGGGAAGCAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS GCA 72 bp | AATACAATTCGCCTTGTTCGAAGTCATTCTTTTTCTTaGCTGGCTTCGCGCTGCGGCATCTGGCTTCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NTIRLVRSHSFS*LASRCGIWLRC Trigger: ACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CAA 72 bp | AAATACAATTCGCCTTGTTCGAAGTCATTCTTTTTCTaGCCTGGCTTCGCGCTGCGGCATCTGGCTTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: KYNSPCSKSFFF*PGFALRHLASL Trigger: CAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CAA 90 bp | TTTTCTTTCAAATACAATTCGCCTTGTTCGAAGTCATTCTTTTTCTaGCCTGGCTTCGCGCTGCGGCATCTGGCTTCGCTGTCCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: FSFKYNSPCSKSFFF*PGFALRHLASLSCS Trigger: CGAGCAGGACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTATTTGAAAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS GCA 72 bp | GTTCTTAAACTGCCCAACTTGGTAGCCATACAGCATTaGGTTTCCAAATTTCAGGAGGTCACCCACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLKLPNLVAIQH*VSKFQEVTHCG Trigger: TCCACAGTGGGTGACCTCCTGAAATTTGGAAACGCAATGCTGTATGGCTACCAAGTTGGGCAGTTTAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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| CDS CCA 72 bp | TGTGACAGAAACCTTTTCACCCTCGTATTCTTTTTCTaGGAACTCGGGAACATAGTGCTGCACAGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CDRNLFTLVFFF*ELGNIVLHRKV Trigger: GACCTTCCTGTGCAGCACTATGTTCCCGAGTTCCCAGAAAAAGAATACGAGGGTGAAAAGGTTTCTGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034929.7 ENSMUST00000215172.2 |
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| CDS CCA 72 bp | AATCCAAATATTTATATCCTGAAGCTCTTTCTACTATaGCTGCCAGCAGAGTATAGCCAAACGTTGAATACA | + |
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Preference number: 6 (lower is better) Translates to: NPNIYILKLFLL*LPAEYSQTLNT Trigger: TGTATTCAACGTTTGGCTATACTCTGCTGGCAGCCATAGTAGAAAGAGCTTCAGGATATAAATATTTGGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034929.7 |
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