Pregenerated sensors for L3MBTL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041565Ensembl transcript IDs: ENSMUST00000093007.6, ENSMUST00000124543.8, ENSMUST00000139383.8, ENSMUST00000233625.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTaGAGCCCCATGGAGGGAGCAACAGTGTCAACAGGACAGACTCCC | + |
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Preference number: 1 (lower is better) Translates to: PDEGVGEGNEGPEGV*SPMEGATVSTGQTP Trigger: GGGAGTCTGTCCTGTTGACACTGTTGCTCCCTCCATGGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 90 bp | TGTACATCAGTGGGAGGAGAGGCCCTTGGTCCTGAGAGTTTTCAATaGCTCAGTGTAAAGGAGTGCCAGGGCAGGAAGGTGGGAGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: CTSVGGEALGPESFQ*LSVKECQGRKVGVD Trigger: ATCCACTCCCACCTTCCTGCCCTGGCACTCCTTTACACTGAGGCATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCACTGATGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 90 bp | GCTCTGGCCACATATGTGGCAGAGGATGGCCTTGTTGTACATCAGTaGGAGGAGAGGCCCTTGGTCCTGAGAGTTTTCAATGCCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ALATYVAEDGLVVHQ*EERPLVLRVFNASV Trigger: CACTGAGGCATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 90 bp | CCAAAGAATACACATGGAGGCTCTGGCCACATATGTGGCAGAGGATaGCCTTGTTGTACATCAGTGGGAGGAGAGGCCCTTGGTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PKNTHGGSGHICGRG*PCCTSVGGEALGPE Trigger: CTCAGGACCAAGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR TCA 90 bp | TCTCAGGCGATCCTGAAGGGCTGCCTCTCTTTTCAAGTTCACATCTaGGTACGGGCACCCAAAAGCACATATGGCACTTCCAGCGGATGC | + |
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Preference number: 1 (lower is better) Translates to: SQAILKGCLSFQVHI*VRAPKSTYGTSSGC Trigger: GCATCCGCTGGAAGTGCCATATGTGCTTTTGGGTGCCCGTACTCAGATGTGAACTTGAAAAGAGAGGCAGCCCTTCAGGATCGCCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR GCA 90 bp | GCACCAGCACCCCAGCTCTTCCACTCAAGGCACCCAGACAACAGATaGAAGCTGTGCTCAGTAGTTCTGGTGAACGTGTTAACAATGCAC | + |
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Preference number: 1 (lower is better) Translates to: APAPQLFHSRHPDNR*KLCSVVLVNVLTMH Trigger: GTGCATTGTTAACACGTTCACCAGAACTACTGAGCACAGCTTGCATCTGTTGTCTGGGTGCCTTGAGTGGAAGAGCTGGGGTGCTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 90 bp | GACTGGATCACCAAAGAATACACATGGAGGCTCTGGCCACATATGTaGCAGAGGATGGCCTTGTTGTACATCAGTGGGAGGAGAGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: DWITKEYTWRLWPHM*QRMALLYISGRRGP Trigger: AGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGATCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 90 bp | GGAGTTCCTAGGGACTGGATCACCAAAGAATACACATGGAGGCTCTaGCCACATATGTGGCAGAGGATGGCCTTGTTGTACATCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GVPRDWITKEYTWRL*PHMWQRMALLYISG Trigger: CCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGATCCAGTCCCTAGGAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 90 bp | ACACAGACAACTAACAAGTGGGTGGGGGATGAGGGGATCCTAGTGTaGCTCAGCAGATGTAAATTCTCAGCTCTTGCCAGAAGACCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TQTTNKWVGDEGILV*LSRCKFSALARRPH Trigger: GTGAGGTCTTCTGGCAAGAGCTGAGAATTTACATCTGCTGAGGCACACTAGGATCCCCTCATCCCCCACCCACTTGTTAGTTGTCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR TCA 90 bp | GGATCAAGTTCCAAATTTGCCTGTGTTTGTTCTCTCAGGCGATCCTaGAGGGCTGCCTCTCTTTTCAAGTTCACATCTGAGTACGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GSSSKFACVCSLRRS*RAASLFKFTSEYGH Trigger: GTGCCCGTACTCAGATGTGAACTTGAAAAGAGAGGCAGCCCTTCAGGATCGCCTGAGAGAACAAACACAGGCAAATTTGGAACTTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR GCA 90 bp | CTTCTAGGCACACTCCTTGCAGTAGGCTCCAGGGTACCTTGGAACTaGAACCAAGGCATGGTAAGGAATAAAAATGAGGATTTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LLGTLLAVGSRVPWN*NQGMVRNKNEDLWS Trigger: GCTCCACAAATCCTCATTTTTATTCCTTACCATGCCTTGGTTGCAGTTCCAAGGTACCCTGGAGCCTACTGCAAGGAGTGTGCCTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 90 bp | GACCATACCTGGGGATCCATCCCATTTACAGCCACTAAACCTGGATaGTATTTTGGATGCTGGGAAGTGCTTGCTGATAAGCCCGATAAG | + |
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Preference number: 1 (lower is better) Translates to: DHTWGSIPFTATKPG*YFGCWEVLADKPDK Trigger: CTTATCGGGCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAATGGGATGGATCCCCAGGTATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 90 bp | AAAGATAAAAGGATAAAGAGTTGTAGACTTGGAGTTCTAATCATTTaGAACTCTGAAGTGGCCTTCCCACAACTTGAATGTCAGACACAC | + |
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Preference number: 1 (lower is better) Translates to: KDKRIKSCRLGVLII*NSEVAFPQLECQTH Trigger: GTGTGTCTGACATTCAAGTTGTGGGAAGGCCACTTCAGAGTTGCAAATGATTAGAACTCCAAGTCTACAACTCTTTATCCTTTTATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGACACTCAACAGATCCTaGGCTGCTCTCTGGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGTLNRS*AALWRS Trigger: AGACCTCCAGAGAGCAGCTCAGGATCTGTTGAGTGT...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCCCCGGAGGTCTTCTGTCCTaGTGCCATGCCTCTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PDEGVGEGNEGPEGVCSPGGLLS*CHASVE Trigger: CTCTACAGAGGCATGGCAGCAGGACAGAAGACCTCC...GGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCAGGAAGGTGGGAGTaGATGCATGGAGGAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: KSPMKELEKGMKDLRGFAAGRWE*MHGGAP Trigger: GGGTGCTCCTCCATGCATCCACTCCCACCTTCCTGC...TGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGGGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCCCCCTTGTTGTACATCAGTaGGAGGAGAGGCCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PDEGVGEGNEGPEGVCSPLVVHQ*EERPLV Trigger: GACCAAGGGCCTCTCCTCCCACTGATGTACAACAAG...GGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCCCCTACACATGGAGGCTCTaGCCACATATGTGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PDEGVGEGNEGPEGVCSPYTWRL*PHMWQR Trigger: CCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTA...GGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGCACCCAGACAACAGATaGAAGCTGTGCTCAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGHPDNR*KLCSVV Trigger: AACTACTGAGCACAGCTTGCATCTGTTGTCTGGGTG...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACCAAAGAATACACATGGAGGCTCTGGCCACATATGTGGCAGAGGATGGCCGTCCCAGCAGGTTCCTaGGATGGCCTCCAAACACTC | + |
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Preference number: 2 (lower is better) Translates to: ITKEYTWRLWPHMWQRMAVPAGS*DGLQTL Trigger: GAGTGTTTGGAGGCCATCCCAGGAACCTGCTGGGAC...GGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTTGCAGCCCCATGGAGGGAGCAACAGTGTCAACAGGACAGACTCCCCCGACATTAAATTCAAATaGATGGCTGCCAACCATGTC | + |
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Preference number: 2 (lower is better) Translates to: GGLQPHGGSNSVNRTDSPDIKFK*MAANHV Trigger: GACATGGTTGGCAGCCATCCATTTGAATTTAATGTC...GGGGGAGTCTGTCCTGTTGACACTGTTGCTCCCTCCATGGGGCTGCAAACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGTGGGAGGAGAGGCCCTTGGTCCTGAGAGTTTTCAATGCCTCAGTGTATCTGTCCTGCTGCCATaGCTCTGTAGAGGTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: TSVGGEALGPESFQCLSVSVLLP*LCRGET Trigger: GGTTTCACCTCTACAGAGGCATGGCAGCAGGACAGA...TACACTGAGGCATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCACTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACCAAAGAATACACATGGAGGCTCTGGCCACATATGTGGCAGAGGATGGCCTTAGAACAAGTGCCCTaGCTGTGGGTCATCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: ITKEYTWRLWPHMWQRMALEQVP*LWVIRS Trigger: ACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAA...GGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATAAGCGAAGGTTCGTCAGGGTaGGAGCTGGAGGAATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QPLNLDAILDAGKCLLISEGSSG*ELEEFQ Trigger: CTGAAATTCCTCCAGCTCCCACCCTGACGAACCTTC...GCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTATTAGAACTCCCTAGGGTTCACTTTCTGGTTCAAGTTTCTACAGTTTCTCACCACCCGATGGGGTaGATGTCCTGGCTGTCGGCA | + |
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Preference number: 2 (lower is better) Translates to: VLLELPRVHFLVQVSTVSHHPMG*MSWLSA Trigger: TGCCGACAGCCAGGACATCCACCCCATCGGGTGGTG...AGAAACTGTAGAAACTTGAACCAGAAAGTGAACCCTAGGGAGTTCTAATAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGAACAAGTGCCCTGACTGTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGGACACACTTGCGGAATaGGAAGTGTTTTCTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VRTSALTVGHQECPSRFLDTLAE*EVFSFR Trigger: TCTAAAAGAAAACACTTCCCATTCCGCAAGTGTGTC...CAGGAACCTGCTGGGACACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATGGCTCCAGGGTACCTTaGAACTGCAACCAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: FTATKPGCYFGCWEVLADGSRVP*NCNQGM Trigger: CATGCCTTGGTTGCAGTTCCAAGGTACCCTGGAGCC...ATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CAA 90 bp | AGCAGGGAGATACTGTCACGTCTGCTTCTTTCTTGTGGCTTCCATTaGGGTTCCCACACCCGATGGATGAGTCAGATGACTCTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SREILSRLLLSCGFH*GSHTRWMSQMTLCF Trigger: AAAACAAAGAGTCATCTGACTCATCCATCGGGTGTGGGAACCCAAATGGAAGCCACAAGAAAGAAGCAGACGTGACAGTATCTCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCACAACTTGAATGTCAGACACACTCAACAGATCCTGAGCTGCTCTCTGAACAGATGCAAGCTGTaGTCAGTAGTTCTGGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PSHNLNVRHTQQILSCSLNRCKL*SVVLVN Trigger: GTTCACCAGAACTACTGAGCACAGCTTGCATCTGTT...CAGAGAGCAGCTCAGGATCTGTTGAGTGTGTCTGACATTCAAGTTGTGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCATTAAATTCAAATGGATaGCTGCCAACCATGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: KSPMKELEKGMKDLRGFALNSNG*LPTMSS Trigger: TGAGGACATGGTTGGCAGCCATCCATTTGAATTTAA...TGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CAA 90 bp | TACAGGGGTTTTCTGATTTGGAATGTGAAGGATCAAGTTCCAAATTaGCCTGTGTTTGTTCTCTCAGGCGATCCTGAAGGGCTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: YRGFLIWNVKDQVPN*PVFVLSGDPEGLPL Trigger: GAGAGGCAGCCCTTCAGGATCGCCTGAGAGAACAAACACAGGCAAATTTGGAACTTGATCCTTCACATTCCAAATCAGAAAACCCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCAAGTTTCTACAGTTTCTTACCTGCACTGACTGTTTGCATTTTCACATTTGGCACTTCCAGCGGATaGCCTGTCACATCGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: GSSFYSFLPALTVCIFTFGTSSG*PVTSHH Trigger: GTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCC...AAATGTGAAAATGCAAACAGTCAGTGCAGGTAAGAAACTGTAGAAACTTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACCAAAGAATACACATGGAGGCTCTGGCCACATATGTGGCAGAGGATGGCCGTCCTGATTAAATATTaGTACACTAATGGGGACATT | + |
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Preference number: 2 (lower is better) Translates to: ITKEYTWRLWPHMWQRMAVLIKY*YTNGDI Trigger: AATGTCCCCATTAGTGTACCAATATTTAATCAGGAC...GGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAATTACAGGGGTTTTCTGATTTGGAATGTGAAGGATCAAGTTCCAAATACCCAAAAGCACATATaGCACTTCCAGCGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: HSNYRGFLIWNVKDQVPNTQKHI*HFQRMP Trigger: GGGCATCCGCTGGAAGTGCCATATGTGCTTTTGGGT...ATTTGGAACTTGATCCTTCACATTCCAAATCAGAAAACCCCTGTAATTTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATAAGCAAGCATCTAAGTCATTaGCACTTGGTCATTTATCAA | + |
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Preference number: 2 (lower is better) Translates to: QPLNLDAILDAGKCLLISKHLSH*HLVIYQ Trigger: TTGATAAATGACCAAGTGCCAATGACTTAGATGCTT...GCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGTTAGCATTTGAAAAAGATTCATACTTTCCTGAGTTAAGGGTCCAGAAACACTTGAGACACACTTaGGGAATGGGAAGTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: CLLAFEKDSYFPELRVQKHLRHT*GMGSVF Trigger: GAAAACACTTCCCATTCCGCAAGTGTGTCTCAAGTG...TTTCTGGACCCTTAACTCAGGAAAGTATGAATCTTTTTCAAATGCTAACAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 72 bp | CGGGCACCCAAAAGCACATATGGCACTTCCAGCGGATaGCCTGTCACATCGCACCACCCGATGGGGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: RAPKSTYGTSSG*PVTSHHPMGWM Trigger: CATCCACCCCATCGGGTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGTGCTTTTGGGTGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGAAGGGGAGAGTCCATTaGAAGGTTCGTCAGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGKGRVH*KVRQGG Trigger: CCCACCCTGACGAACCTTCAAATGGACTCTCCCCTT...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 72 bp | GTGGGAGGAGAGGCCCTTGGTCCTGAGAGTTTTCAATaGCTCAGTGTAAAGGAGTGCCAGGGCAGGAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: VGGEALGPESFQ*LSVKECQGRKV Trigger: CACCTTCCTGCCCTGGCACTCCTTTACACTGAGGCATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 72 bp | GGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTaGAGCCCCATGGAGGGAGCAACAGTGTCAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: GVGEGNEGPEGV*SPMEGATVSTG Trigger: TCCTGTTGACACTGTTGCTCCCTCCATGGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 72 bp | GTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGGGATaGCCTCCAAACACTCACTCCTCTGTTACTTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: VGHQECPSRFLG*PPNTHSSVTSR Trigger: CCTAGAAGTAACAGAGGAGTGAGTGTTTGGAGGCCATCCCAGGAACCTGCTGGGACACTCCTGATGACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 72 bp | ACACATGGAGGCTCTGGCCACATATGTGGCAGAGGATaGCCTTGTTGTACATCAGTGGGAGGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: THGGSGHICGRG*PCCTSVGGEAL Trigger: AAGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR-3UTR CAA 90 bp | GCACCAGCACCCCAGCTCTTCCACTCAAGGCACCCAGACAACAGATGCAAGCTGCTGGCATTTTACCACTaGAGACACACTTGCGGAATG | + |
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Preference number: 3 (lower is better) Translates to: APAPQLFHSRHPDNRCKLLAFYH*RHTCGM Trigger: CATTCCGCAAGTGTGTCTCAAGTGGTAAAATGCCAG...CAGCTTGCATCTGTTGTCTGGGTGCCTTGAGTGGAAGAGCTGGGGTGCTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR TCA 72 bp | GAAGTGCTTGCTGATAAGCCCGATAAGGCTGTCTCCTaGGAGGCTCTGCCAGAGCCTGACAAATACCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EVLADKPDKAVS*EALPEPDKYQG Trigger: GCCTTGGTATTTGTCAGGCTCTGGCAGAGCCTCTCAGGAGACAGCCTTATCGGGCTTATCAGCAAGCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR CCA 72 bp | GGAGTTCCTAGGGACTGGATCACCAAAGAATACACATaGAGGCTCTGGCCACATATGTGGCAGAGGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: GVPRDWITKEYT*RLWPHMWQRMA Trigger: GGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGATCCAGTCCCTAGGAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 72 bp | CCCCAGCTCTTCCACTCAAGGCACCCAGACAACAGATaGAAGCTGTGCTCAGTAGTTCTGGTGAACGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: PQLFHSRHPDNR*KLCSVVLVNVL Trigger: TAACACGTTCACCAGAACTACTGAGCACAGCTTGCATCTGTTGTCTGGGTGCCTTGAGTGGAAGAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
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| 3UTR GCA 72 bp | ACTAACAAGTGGGTGGGGGATGAGGGGATCCTAGTGTaGCTCAGCAGATGTAAATTCTCAGCTCTTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TNKWVGDEGILV*LSRCKFSALAR Trigger: TCTGGCAAGAGCTGAGAATTTACATCTGCTGAGGCACACTAGGATCCCCTCATCCCCCACCCACTTGTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR GCA 72 bp | AACTTGAATGTCAGACACACTCAACAGATCCTGAGCTaGTCTCTGGAGGTCTTCTGTCCTGCTGCCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NLNVRHTQQILS*SLEVFCPAAMP Trigger: AGGCATGGCAGCAGGACAGAAGACCTCCAGAGAGCAGCTCAGGATCTGTTGAGTGTGTCTGACATTCAAGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | ACCAAAGAATACACATGGAGGCTCTGGCCACATATGTaGCAGAGGATGGCCTTGTTGTACATCAGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKEYTWRLWPHM*QRMALLYISGR Trigger: CCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | AGGGACTGGATCACCAAAGAATACACATGGAGGCTCTaGCCACATATGTGGCAGAGGATGGCCTTGTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RDWITKEYTWRL*PHMWQRMALLY Trigger: GTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCATGTGTATTCTTTGGTGATCCAGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR TCA 72 bp | ATCCTGAAGGGCTGCCTCTCTTTTCAAGTTCACATCTaGGTACGGGCACCCAAAAGCACATATGGCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILKGCLSFQVHI*VRAPKSTYGTS Trigger: GGAAGTGCCATATGTGCTTTTGGGTGCCCGTACTCAGATGTGAACTTGAAAAGAGAGGCAGCCCTTCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR TCA 72 bp | TTGTTGTACATCAGTGGGAGGAGAGGCCCTTGGTCCTaGGAGTTTTCAATGCCTCAGTGTAAAGGAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLYISGRRGPWS*EFSMPQCKGVP Trigger: TGGCACTCCTTTACACTGAGGCATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCACTGATGTACAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | CCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTaGTTGCTGATAAGCCCGATAAGGCTGTCTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLNLDAILDAGK*LLISPIRLSPE Trigger: CTCAGGAGACAGCCTTATCGGGCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | ACATATGTGGCAGAGGATGGCCTTGTTGTACATCAGTaGGAGGAGAGGCCCTTGGTCCTGAGAGTTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TYVAEDGLVVHQ*EERPLVLRVFN Trigger: ATTGAAAACTCTCAGGACCAAGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | CTAGGCACACTCCTTGCAGTAGGCTCCAGGGTACCTTaGAACTGCAACCAAGGCATGGTAAGGAATAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGTLLAVGSRVP*NCNQGMVRNKN Trigger: ATTTTTATTCCTTACCATGCCTTGGTTGCAGTTCCAAGGTACCCTGGAGCCTACTGCAAGGAGTGTGCCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCTGGGATGGCCTCCAAACACTCACTCCTCTGTTACTTCTAGGCACACTCCAATGCACTAGTGAATaGATTTTCTGGCATTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: GSWDGLQTLTPLLLLGTLQCTSE*IFWHFT Trigger: GGTAAAATGCCAGAAAATCAATTCACTAGTGCATTG...GAGTGTGCCTAGAAGTAACAGAGGAGTGAGTGTTTGGAGGCCATCCCAGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATCAGGCAGGTAGGTCTTaGACCAATGCCACTGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FTATKPGCYFGCWEVLADQAGRS*TNATVR Trigger: TCTAACAGTGGCATTGGTCAAAGACCTACCTGCCTG...ATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR TCA 72 bp | TCCAAATTTGCCTGTGTTTGTTCTCTCAGGCGATCCTaGAGGGCTGCCTCTCTTTTCAAGTTCACATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKFACVCSLRRS*RAASLFKFTSE Trigger: CTCAGATGTGAACTTGAAAAGAGAGGCAGCCCTTCAGGATCGCCTGAGAGAACAAACACAGGCAAATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR GCA 72 bp | ACACTCCTTGCAGTAGGCTCCAGGGTACCTTGGAACTaGAACCAAGGCATGGTAAGGAATAAAAATGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TLLAVGSRVPWN*NQGMVRNKNED Trigger: ATCCTCATTTTTATTCCTTACCATGCCTTGGTTGCAGTTCCAAGGTACCCTGGAGCCTACTGCAAGGAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | CCATTTACAGCCACTAAACCTGGATGCTATTTTGGATaGTGGGAAGTGCTTGCTGATAAGCCCGATAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PFTATKPGCYFG*WEVLADKPDKA Trigger: AGCCTTATCGGGCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | TGGGGATCCATCCCATTTACAGCCACTAAACCTGGATaGTATTTTGGATGCTGGGAAGTGCTTGCTGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: WGSIPFTATKPG*YFGCWEVLADK Trigger: CTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAATGGGATGGATCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | TTGCTACTACATGGAAAAGGACAAAGAGACCATACCTaGGGATCCATCCCATTTACAGCCACTAAACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLHGKGQRDHT*GSIPFTATKPG Trigger: TCCAGGTTTAGTGGCTGTAAATGGGATGGATCCCCAGGTATGGTCTCTTTGTCCTTTTCCATGTAGTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATAAGCCTAAGTCATTGGCACTaGGTCATTTATCAAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QPLNLDAILDAGKCLLISLSHWH*VIYQSP Trigger: TGGACTTTGATAAATGACCAAGTGCCAATGACTTAG...GCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | AACATTCTTAATGTAGCAGGGAGATACTGTCACGTCTaGTTCTTTCTTGTGGCTTCCATTTGGGTTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: NILNVAGRYCHV*FFLVASIWVPT Trigger: TGTGGGAACCCAAATGGAAGCCACAAGAAAGAAGCAGACGTGACAGTATCTCCCTGCTACATTAAGAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | AACCCACACCTGGACCAAACTAAGCATCTAAGTCATTaGCACTTGGTCATTTATCAAAGTCCACCATATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NPHLDQTKHLSH*HLVIYQSPPYA Trigger: GGCATATGGTGGACTTTGATAAATGACCAAGTGCCAATGACTTAGATGCTTAGTTTGGTCCAGGTGTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | AGGATAAAGAGTTGTAGACTTGGAGTTCTAATCATTTaGAACTCTGAAGTGGCCTTCCCACAACTTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: RIKSCRLGVLII*NSEVAFPQLEC Trigger: ACATTCAAGTTGTGGGAAGGCCACTTCAGAGTTGCAAATGATTAGAACTCCAAGTCTACAACTCTTTATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR GCA 72 bp | CAGATGACTCTTTGTTTTCAGGAGGATAGCTTTCATTaGTACTACATGGAAAAGGACAAAGAGACCATACCT | + |
|
Preference number: 3 (lower is better) Translates to: QMTLCFQEDSFH*YYMEKDKETIP Trigger: AGGTATGGTCTCTTTGTCCTTTTCCATGTAGTAGCAATGAAAGCTATCCTCCTGAAAACAAAGAGTCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CCA 72 bp | AAATATTGGTACACTAATGGGGACATTAAATTCAAATaGATGGCTGCCAACCATGTCCTCAAACGTGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KYWYTNGDIKFK*MAANHVLKRAS Trigger: ACTTGCACGTTTGAGGACATGGTTGGCAGCCATCCATTTGAATTTAATGTCCCCATTAGTGTACCAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCAAGTTTCTACAGTTTCTTACCTGCACTGACTGTTTGCATTTTCACATTTCAGGGGTTTTCTGATTaGGAATGTGAAGGATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSFYSFLPALTVCIFTFQGFSD*ECEGSS Trigger: ACTTGATCCTTCACATTCCAAATCAGAAAACCCCTG...AAATGTGAAAATGCAAACAGTCAGTGCAGGTAAGAAACTGTAGAAACTTGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR GCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCCCCGGAAGCAGCTTGCAGTaGTGCTCCCTGCTGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDEGVGEGNEGPEGVCSPGSSLQ*CSLLRG Trigger: CCCCCTCAGCAGGGAGCAGCACTGCAAGCTGCTTCC...GGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | GAGCACCAGCACCCCAGCTCTTCCACTCAAGGCACCCAGACAACAGATGCAAGCAGCAGCTTGCAGTGCTaGTCCCTGCTGAGGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EHQHPSSSTQGTQTTDASSSLQC*SLLRGM Trigger: CATCCCCCTCAGCAGGGAGCAGCACTGCAAGCTGCT...GCTTGCATCTGTTGTCTGGGTGCCTTGAGTGGAAGAGCTGGGGTGCTGGTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGCAGCCCAGAAGAGACTaGACAAACTCAGCCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGQPRRD*TNSATS Trigger: TGAGGTGGCTGAGTTTGTGCAGTCTCTTCTGGGCTG...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | GCACTTCCAGCGGATGCCCTGTCACATCGCACCACCCGATGGGGTGGATGTCCTCCGGGGAACCAGCATTaGTCCAAAAATCATAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPADALSHRTTRWGGCPPGNQH*SKNHSS Trigger: GCTGCTATGATTTTTGGACCAATGCTGGTTCCCCGG...AGGACATCCACCCCATCGGGTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGCATCCACTGTCCATCTaGCCACTTGACTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGHPLSI*PLDWLG Trigger: TCCAAGCCAGTCAAGTGGCCAGATGGACAGTGGATG...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| 3UTR CAA 72 bp | TGGAGGCTCTGGCCACATATGTGGCAGAGGATGGCCTaGTTGTACATCAGTGGGAGGAGAGGCCCTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRLWPHMWQRMA*LYISGRRGPWS Trigger: GGACCAAGGGCCTCTCCTCCCACTGATGTACAACAAGGCCATCCTCTGCCACATATGTGGCCAGAGCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGAACAAGTGCCCTGACTGTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGATGGAGAGCGGCTGGTaGAGCATCTGCTGCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSALTVGHQECPSRFLMESGW*SICCTC Trigger: ACAGGTGCAGCAGATGCTTCACCAGCCGCTCTCCAT...CAGGAACCTGCTGGGACACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATGTTCTTCCGTTCTCCTaGCACCAACCAACCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGCRHPPNSRTYGPSHRNVLPFS*HQPTGW Trigger: CCAGCCGGTTGGTTGGTGTCAGGAGAACGGAAGAAC...ATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGACAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCCTGGGATGGCCTCCAAACACTCACTCCTCTGTTACTTCTAGGCACACTCGTCCATCTGGCCACTTaGCTGGCTTGGATGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSWDGLQTLTPLLLLGTLVHLAT*LAWMSA Trigger: GGCTGACATCCAAGCCAGTCAAGTGGCCAGATGGAC...GAGTGTGCCTAGAAGTAACAGAGGAGTGAGTGTTTGGAGGCCATCCCAGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | GCACTTCCAGCGGATGCCCTGTCACATCGCACCACCCGATGGGGTGGATGTCCTGTCTTCCACAATGTCTaGAATGGTTGCCACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPADALSHRTTRWGGCPVFHNV*NGCHTH Trigger: ATGTGTGTGGCAACCATTGCAGACATTGTGGAAGAC...AGGACATCCACCCCATCGGGTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGAACAAGTGCCCTGACTGTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGATCTGGCCACTTGACTaGCTTGGATGTCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VRTSALTVGHQECPSRFLIWPLD*LGCQPH Trigger: GTGTGGCTGACATCCAAGCCAGTCAAGTGGCCAGAT...CAGGAACCTGCTGGGACACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | CCCGATGAAGGAGTTGGAGAAGGGAATGAAGGACCTGAGGGGGTTTGCAGCCCCTCTTCAGTGACATCCTaGGAGTTCCTGAACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDEGVGEGNEGPEGVCSPSSVTS*EFLNIR Trigger: CCTGATGTTCAGGAACTCCCAGGATGTCACTGAAGA...GGGGCTGCAAACCCCCTCAGGTCCTTCATTCCCTTCTCCAACTCCTTCATCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR TCA 90 bp | GATGGGGTGGATGTCCTGGCTGTCGGCATCCACCCAATAGTCGTACTTATGGTCAGCTTCATCCCAACTTaGAACTCCCTTGGCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGVDVLAVGIHPIVVLMVSFIPT*NSLGTG Trigger: TCCAGTGCCAAGGGAGTTTCAAGTTGGGATGAAGCT...GACCATAAGTACGACTATTGGGTGGATGCCGACAGCCAGGACATCCACCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CCA 90 bp | GGCACCCAAAAGCACATATGGCACTTCCAGCGGATGCCCTGTCACATCGCACCAGCAACACGAATCAACTaGGGGTTCCTTTTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GTQKHIWHFQRMPCHIAPATRIN*GFLLST Trigger: TGTGGACAAAAGGAACCCCCAGTTGATTCGTGTTGC...TGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGTGCTTTTGGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR CAA 72 bp | GGGTGGGAGCTGGAGGAATTTCAGGCAGGTAGGTCTTaGACCAATGCCACTGTTAGAACAAGTGCCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GWELEEFQAGRS*TNATVRTSALT Trigger: AGTCAGGGCACTTGTTCTAACAGTGGCATTGGTCAAAGACCTACCTGCCTGAAATTCCTCCAGCTCCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGAACAAGTGCCCTGACTGTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGCTATCTGCTCCTTCTTaGAGCACTTGGCGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSALTVGHQECPSRFLLSAPS*STWRVL Trigger: AAGAACACGCCAAGTGCTTCAAGAAGGAGCAGATAG...CAGGAACCTGCTGGGACACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | CCAAATTTGCCTGTGTTTGTTCTCTCAGGCGATCCTGAAGGGCTGCCTCTCTTTCCTTCTCTCAGGTACTaGTCCCAGGACCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNLPVFVLSGDPEGLPLFPSLRY*SQDQVS Trigger: GGAAACCTGGTCCTGGGAGCAGTACCTGAGAGAAGG...AAAGAGAGGCAGCCCTTCAGGATCGCCTGAGAGAACAAACACAGGCAAATTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGAACAAGTGCCCTGACTGTGGGTCATCAGGAGTGTCCCAGCAGGTTCCTGGTTGTAGATCTTCAGTaGTGGGCCCAGCTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSALTVGHQECPSRFLVVDLQ*WAQLDS Trigger: AGAATCAAGCTGGGCCCAGCACTGAAGATCTACAAC...CAGGAACCTGCTGGGACACTCCTGATGACCCACAGTCAGGGCACTTGTTCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTTTTCAAGTTCACATCTGAGTACGGGCACCCAAAAGCACATATGGCACCTCGCTTTGAAGGTGTaGTCACCTCTCCCGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFSSSHLSTGTQKHIWHLALKV*SPLPAS Trigger: AGAAGCCGGGAGAGGTGACCACACCTTCAAAGCGAG...GTGCCATATGTGCTTTTGGGTGCCCGTACTCAGATGTGAACTTGAAAAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCCTGGGATGGCCTCCAAACACTCACTCCTCTGTTACTTCTAGGCACACTCGCTTTGCCATCTATCTaGTCCTTCTTGAAGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSWDGLQTLTPLLLLGTLALPSI*SFLKHL Trigger: CAAGTGCTTCAAGAAGGAGCAGATAGATGGCAAAGC...GAGTGTGCCTAGAAGTAACAGAGGAGTGAGTGTTTGGAGGCCATCCCAGGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATTGCTCCGGAAAGGATTaGTCCTTGGAAAACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCRHPPNSRTYGPSHRNCSGKD*SLENSS Trigger: AGAACTGTTTTCCAAGGACCAATCCTTTCCGGAGCA...ATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGACAGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR CAA 72 bp | CTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTaGCTGATAAGCCCGATAAGGCTGTCTCCTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLDAILDAGKC*LISPIRLSPER Trigger: CCTCTCAGGAGACAGCCTTATCGGGCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTGTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATTATGCAGTTCATGCTTaGTCTTTTGACACCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGCRHPPNSRTYGPSHRNYAVHA*SFDTIP Trigger: TGGGATGGTGTCAAAAGACCAAGCATGAACTGCATA...ATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGACAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR CAA 72 bp | ATACTGTCACGTCTGCTTCTTTCTTGTGGCTTCCATTaGGGTTCCCACACCCGATGGATGAGTCAGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSRLLLSCGFH*GSHTRWMSQMT Trigger: AGTCATCTGACTCATCCATCGGGTGTGGGAACCCAAATGGAAGCCACAAGAAAGAAGCAGACGTGACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | GTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATGAATCTTGTAGCCACACACCTCTaGTACAGAAAGCACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGIHPIVVLMVPAIEMNLVATHL*YRKHTE Trigger: TTCTGTGTGCTTTCTGTAGCAGAGGTGTGTGGCTAC...AAGATTCATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR CAA 72 bp | CCATCCCATTTACAGCCACTAAACCTGGATGCTATTTaGGATGCTGGGAAGTGCTTGCTGATAAGCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSHLQPLNLDAI*DAGKCLLISPI Trigger: TATCGGGCTTATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAATGGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CCA 90 bp | GTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATGAATCTTGAAAGGATTGGTCCTTaGAAAACAGTTCTACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGIHPIVVLMVPAIEMNLERIGP*KTVLLV Trigger: CACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTC...AAGATTCATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTGGAGTTCTAATCATTTGCAACTCTGAAGTGGCCTTCCCACAACTTGAAGAAGCAGGAAGGCTTTaGCATCTATCTGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGVLIICNSEVAFPQLEEAGRL*HLSAPS Trigger: AGAAGGAGCAGATAGATGGCAAAGCCTTCCTGCTTC...TTCAAGTTGTGGGAAGGCCACTTCAGAGTTGCAAATGATTAGAACTCCAAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR GCA 90 bp | TTTACAGCCACTAAACCTGGATGCTATTTTGGATGCTGGGAAGTGCTTGCTGATCACTTTGACAATATCTaGCTGGGTCAGAAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTATKPGCYFGCWEVLADHFDNI*LGQKQE Trigger: TTCCTGCTTCTGACCCAGGCAGATATTGTCAAAGTG...ATCAGCAAGCACTTCCCAGCATCCAAAATAGCATCCAGGTTTAGTGGCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR TCA 90 bp | CCAATAGTCGTACTTATGGTCCCAGCCATCGAAATGAATCTTTACTCTGTAGTCAACCTCATTCCAACCTaGAAGCCATTTTCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIVVLMVPAIEMNLYSVVNLIPT*KPFSCS Trigger: GGAGCATGAAAATGGCTTTCAGGTTGGAATGAGGTT...GACTACAGAGTAAAGATTCATTTCGATGGCTGGGACCATAAGTACGACTATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| 3UTR CAA 72 bp | TTTCTGATTTGGAATGTGAAGGATCAAGTTCCAAATTaGCCTGTGTTTGTTCTCTCAGGCGATCCTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIWNVKDQVPN*PVFVLSGDPEG Trigger: CCCTTCAGGATCGCCTGAGAGAACAAACACAGGCAAATTTGGAACTTGATCCTTCACATTCCAAATCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCAAGTTTCTACAGTTTCTTACCTGCACTGACTGTTTGCATTTTCACATTTCCACAATGTCTGCAATaGTTGCCACACACATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSFYSFLPALTVCIFTFPQCLQ*LPHTSS Trigger: GCTTGATGTGTGTGGCAACCATTGCAGACATTGTGG...AAATGTGAAAATGCAAACAGTCAGTGCAGGTAAGAAACTGTAGAAACTTGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCAAGTTTCTACAGTTTCTTACCTGCACTGACTGTTTGCATTTTCACATTTTTCTTAGGAGCATTTTaGAATCTACAGGCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSFYSFLPALTVCIFTFFLGAF*NLQAFK Trigger: CTTGAAGGCCTGTAGATTGCAAAATGCTCCTAAGAA...AAATGTGAAAATGCAAACAGTCAGTGCAGGTAAGAAACTGTAGAAACTTGAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS TCA 90 bp | TCTCGGAAAGGGTGGGCAGACGTGGATGTCATGGAGAGCGGCTGGTaGAGCATCTGCTGCACCTGTGCAGCTGAGTACTCACCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRKGWADVDVMESGW*SICCTCAAEYSPLQ Trigger: CTGCAGAGGTGAGTACTCAGCTGCACAGGTGCAGCAGATGCTTCACCAGCCGCTCTCCATGACATCCACGTCTGCCCACCCTTTCCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093007.6 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAAAAGCACATATGGCACTTCCAGCGGATGCCCTGTCACATCGCACCACCATGTGGAGTCCTCTaGGGGAGCGACCAGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTQKHIWHFQRMPCHIAPPCGVL*GSDQSS Trigger: AGAACTCTGGTCGCTCCCCAAGAGGACTCCACATGG...TGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGTGCTTTTGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS GCA 90 bp | GGAAGGATTTTCACATGCTTTGACCCATATGGCACTTCCAGCGGATaGCCTGTCACATCGCACCACCCGATGGGGTGGATGTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRIFTCFDPYGTSSG*PVTSHHPMGWMSWL Trigger: CAGCCAGGACATCCACCCCATCGGGTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGGGTCAAAGCATGTGAAAATCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS-3UTR CAA 90 bp | GAGCACCAGCACCCCAGCTCTTCCACTCAAGGCACCCAGACAACAGATGCAAGCTCCTTCTTGAAGCACTaGGCGTGTTCTTCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EHQHPSSSTQGTQTTDASSFLKH*ACSSQP Trigger: GGGCTGTGAAGAACACGCCAAGTGCTTCAAGAAGGA...GCTTGCATCTGTTGTCTGGGTGCCTTGAGTGGAAGAGCTGGGGTGCTGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS GCA 90 bp | GTCAAAATGCACCCGGACTCGGTCTTCCACAATGTCTGCAATGGTTaGCACACACATCAAGCAAGGGTTCCTCCTGTCCACAGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKMHPDSVFHNVCNG*HTHQARVPPVHSLQ Trigger: CTGGAGGCTGTGGACAGGAGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTGCATTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS GCA 90 bp | AACAGTTCTACTGGTGCAGCTACAGCGTTCCCTTCTCTCAGGTACTaGTCCCAGGACCAGGTTTCCGCTGTAGTCACAGAAGATTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSTGAATAFPSLRY*SQDQVSAVVTEDSR Trigger: GCGAGAATCTTCTGTGACTACAGCGGAAACCTGGTCCTGGGAGCAGTACCTGAGAGAAGGGAACGCTGTAGCTGCACCAGTAGAACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CCA 90 bp | AGCTGTCAAAATGCACCCGGACTCGGTCTTCCACAATGTCTGCAATaGTTGCCACACACATCAAGCAAGGGTTCCTCCTGTCCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCQNAPGLGLPQCLQ*LPHTSSKGSSCPQP Trigger: AGGCTGTGGACAGGAGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTGCATTTTGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGAGTGGATGCATGGAGGAGCACCCTCACAGAGGCAGAGGAAGCAGGGTTATCTCTTGTCTTCTaGGCTAGAGGCATCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVGVDAWRSTLTEAEEAGLSLVF*ARGIFS Trigger: ACTGAAGATGCCTCTAGCCAAGAAGACAAGAGATAA...CCCTGCTTCCTCTGCCTCTGTGAGGGTGCTCCTCCATGCATCCACTCCCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS GCA 90 bp | TTCATGCTCCGGAAAGGATTGGTCCTTGGAAAACAGTTCTACTGGTaGAGCTACAGCGTTCCCTTCTCTCAGGTACTGCTCCCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: FMLRKGLVLGKQFYW*SYSVPFSQVLLPGP Trigger: TGGTCCTGGGAGCAGTACCTGAGAGAAGGGAACGCTGTAGCTGCACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCCGGAGCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS GCA 90 bp | ATCCAAGCTGTCAAAATGCACCCGGACTCGGTCTTCCACAATGTCTaGAATGGTTGCCACACACATCAAGCAAGGGTTCCTCCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IQAVKMHPDSVFHNV*NGCHTHQARVPPVH Trigger: GTGGACAGGAGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTGCATTTTGACAGCTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CCA 90 bp | CCGGTAGCCACACACCTCTGCTACAGAAAGCACACAGAACACAGATaGACGTCGGGCATCAATGCCTTCCAACCTCATTCCAACCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVATHLCYRKHTEHR*TSGINAFQPHSNLK Trigger: TTTCAGGTTGGAATGAGGTTGGAAGGCATTGATGCCCGACGTCCATCTGTGTTCTGTGTGCTTTCTGTAGCAGAGGTGTGTGGCTACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGTGGATGTCCTGGCTGTCGGCATCCACCCAATAGTCGTACTTATGGTCATGCTCCGGAAAGGATaGGTCCTTGGAAAACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGVDVLAVGIHPIVVLMVMLRKG*VLGKQF Trigger: GAACTGTTTTCCAAGGACCAATCCTTTCCGGAGCAT...GACCATAAGTACGACTATTGGGTGGATGCCGACAGCCAGGACATCCACCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTCTGTCCTGCTGCCATGCCTCTGTAGAGGTGAAACCAGACCTGATTGCTCTATCTGCTCCTTCTaGAAGCACTTGGCGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSVLLPCLCRGETRPDCSICSF*KHLACS Trigger: AGAACACGCCAAGTGCTTCAAGAAGGAGCAGATAGA...GCAATCAGGTCTGGTTTCACCTCTACAGAGGCATGGCAGCAGGACAGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAAAAGCACATATGGCACTTCCAGCGGATGCCCTGTCACATCGCACCATTTCTTAGGAGCATTTaGCAATCTACAGGCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTQKHIWHFQRMPCHIAPFLRSI*QSTGLQ Trigger: TTGAAGGCCTGTAGATTGCAAAATGCTCCTAAGAAA...TGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGTGCTTTTGGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | GTCGGCATCCACCCAATAGTCGTACTTATGGTCCCAGCCATCGAAATGAATCTTCAGCTTCATCCCAACTaGAAACTCCCTTGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGIHPIVVLMVPAIEMNLQLHPN*KLPWHW Trigger: CCAGTGCCAAGGGAGTTTCAAGTTGGGATGAAGCTG...AAGATTCATTTCGATGGCTGGGACCATAAGTACGACTATTGGGTGGATGCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCACAACTTGAATGTCAGACACACTCAACAGATCCTGAGCTGCTCTCTGAGAAGCAGGAAGGCTTaGCCATCTATCTGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLNVRHTQQILSCSLRSRKA*PSICSF Trigger: GAAGGAGCAGATAGATGGCAAAGCCTTCCTGCTTCT...CAGAGAGCAGCTCAGGATCTGTTGAGTGTGTCTGACATTCAAGTTGTGGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS CCA 90 bp | AGCATCTGCTGCACCTGTGCAGCTGAGTACTCACCTCTGCAGCTATaGGTCACCATGGCTCTGAAGAGATTATCCAAGTCAATATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SICCTCAAEYSPLQL*VTMALKRLSKSISS Trigger: AGAAGATATTGACTTGGATAATCTCTTCAGAGCCATGGTGACCCATAGCTGCAGAGGTGAGTACTCAGCTGCACAGGTGCAGCAGATGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093007.6 |
||
| CDS CCA 90 bp | TTCCAACCTGAAAGCCATTTTCATGCTCCGGAAAGGATTGGTCCTTaGAAAACAGTTCTACTGGTGCAGCTACAGCGTTCCCTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQPESHFHAPERIGP*KTVLLVQLQRSLLS Trigger: TGAGAGAAGGGAACGCTGTAGCTGCACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCCGGAGCATGAAAATGGCTTTCAGGTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTTAGCATTTGAAAAAGATTCATACTTTCCTGAGTTAAGGGTCCAGAAAGGCCACTTGACTGGCTaGGATGTCAGCCACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLLAFEKDSYFPELRVQKGHLTG*DVSHTW Trigger: CCAGGTGTGGCTGACATCCAAGCCAGTCAAGTGGCC...TTTCTGGACCCTTAACTCAGGAAAGTATGAATCTTTTTCAAATGCTAACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233625.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTATTAGAACTCCCTAGGGTTCACTTTCTGGTTCAAGTTTCTACAGTTTCTAACTGGGGGTTCCTTTaGTCCACAGCTTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLELPRVHFLVQVSTVSNWGFL*STASNF Trigger: GAAGTTGGAAGCTGTGGACAAAAGGAACCCCCAGTT...AGAAACTGTAGAAACTTGAACCAGAAAGTGAACCCTAGGGAGTTCTAATAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATTAGAACTCCCTAGGGTTCACTTTCTGGTTCAAGTTTCTACAGTTTCTGGAAAGGATTGGTCCTaGGAAAACAGTTCTACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLELPRVHFLVQVSTVSGKDWS*ENSSTG Trigger: ACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCC...AGAAACTGTAGAAACTTGAACCAGAAAGTGAACCCTAGGGAGTTCTAATAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139383.8 |
||
| CDS CCA 72 bp | CGGGCACCCAAAAGCACTGTGGTGTCCTGCATAACGTaGGCCACGGATATGACCTATGCCTCGGCACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAPKSTVVSCIT*ATDMTYASAPR Trigger: CCTGGGTGCCGAGGCATAGGTCATATCCGTGGCCCACGTTATGCAGGACACCACAGTGCTTTTGGGTGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS TCA 72 bp | GGGTGGGCAGACGTGGATGTCATGGAGAGCGGCTGGTaGAGCATCTGCTGCACCTGTGCAGCTGAGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GWADVDVMESGW*SICCTCAAEYS Trigger: TGAGTACTCAGCTGCACAGGTGCAGCAGATGCTTCACCAGCCGCTCTCCATGACATCCACGTCTGCCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093007.6 |
||
| CDS CCA 72 bp | GGATGTCTCGGAAAGGGTGGGCAGACGTGGATGTCATaGAGAGCGGCTGGTGAAGCATCTGCTGCACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCLGKGGQTWMS*RAAGEASAAPV Trigger: CACAGGTGCAGCAGATGCTTCACCAGCCGCTCTCCATGACATCCACGTCTGCCCACCCTTTCCGAGACATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000233625.2 |
||
| CDS GCA 72 bp | TTCACATGCTTTGACCCATATGGCACTTCCAGCGGATaGCCTGTCACATCGCACCACCCGATGGGGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: FTCFDPYGTSSG*PVTSHHPMGWM Trigger: CATCCACCCCATCGGGTGGTGCGATGTGACAGGGCATCCGCTGGAAGTGCCATATGGGTCAAAGCATGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS GCA 72 bp | ACTGGTGCAGCTACAGCGTTCCCTTCTCTCAGGTACTaGTCCCAGGACCAGGTTTCCGCTGTAGTCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TGAATAFPSLRY*SQDQVSAVVTE Trigger: TTCTGTGACTACAGCGGAAACCTGGTCCTGGGAGCAGTACCTGAGAGAAGGGAACGCTGTAGCTGCACCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS GCA 72 bp | CACCCGGACTCGGTCTTCCACAATGTCTGCAATGGTTaGCACACACATCAAGCAAGGGTTCCTCCTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HPDSVFHNVCNG*HTHQARVPPVH Trigger: GTGGACAGGAGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CCA 72 bp | ACTGCACAAACTCAGCCACCTCATCCACTGTCCATCTaGCCACTTGACTGGCTTGGATGTCAGCCACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAQTQPPHPLSI*PLDWLGCQPHL Trigger: CAGGTGTGGCTGACATCCAAGCCAGTCAAGTGGCCAGATGGACAGTGGATGAGGTGGCTGAGTTTGTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000233625.2 |
||
| CDS CAA 72 bp | CCTCATGCCAAAGGCCTTGGCGGGCACTGCCTTCGATaGAGAAGCTCGCAGGTAGTCTGTCCAGGAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PHAKGLGGHCLR*RSSQVVCPGKL Trigger: AAGTTTTCCTGGACAGACTACCTGCGAGCTTCTCAATCGAAGGCAGTGCCCGCCAAGGCCTTTGGCATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS CAA 72 bp | TGTGGTCACCTCTCCCGGCTTCTTTTCTTCCTCAGTTaGCCCCGTGCATCTGTCCTGATTCATGCGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGHLSRLLFFLS*PRASVLIHALC Trigger: ACAGAGCGCATGAATCAGGACAGATGCACGGGGCAAACTGAGGAAGAAAAGAAGCCGGGAGAGGTGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CAA 90 bp | TGTCAAAATGCACCCGGACTCGGTCTTCCACAATGTCTGCAATGGTaGCCACACACATCAAGCAAGGGTTCCTCCTGTCCACAGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQNAPGLGLPQCLQW*PHTSSKGSSCPQPP Trigger: TGGAGGCTGTGGACAGGAGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTGCATTTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CAA 90 bp | ATGTGGAGTCCTCATGCCAAAGGCCTTGGCGGGCACTGCCTTCGATaGAGAAGCTCGCAGGTAGTCTGTCCAGGAAAACTTATCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MWSPHAKGLGGHCLR*RSSQVVCPGKLIWM Trigger: CATCCAGATAAGTTTTCCTGGACAGACTACCTGCGAGCTTCTCAATCGAAGGCAGTGCCCGCCAAGGCCTTTGGCATGAGGACTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS GCA 72 bp | AAGCACTTGGCGTGTTCTTCACAGCCCAGAAGAGACTaGACAAACTCAGCCACCTCATCCACTGTCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: KHLACSSQPRRD*TNSATSSTVHL Trigger: CAGATGGACAGTGGATGAGGTGGCTGAGTTTGTGCAGTCTCTTCTGGGCTGTGAAGAACACGCCAAGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000233625.2 |
||
| CDS TCA 72 bp | CCAGGTTTCCGCTGTAGTCACAGAAGATTCTCGCTTTaGAGGTGTGGTCACCTCTCCCGGCTTCTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGFRCSHRRFSL*RCGHLSRLLFF Trigger: GAAGAAAAGAAGCCGGGAGAGGTGACCACACCTTCAAAGCGAGAATCTTCTGTGACTACAGCGGAAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS TCA 72 bp | CCTATGCCTCGGCACCCAGGAGTAGGACATGCAGGTTaGCCTGGAAGGATTTTCACATGCTTTGACCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: PMPRHPGVGHAG*PGRIFTCFDPY Trigger: ATATGGGTCAAAGCATGTGAAAATCCTTCCAGGTCAACCTGCATGTCCTACTCCTGGGTGCCGAGGCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
||
| CDS GCA 72 bp | CGGAAAGGATTGGTCCTTGGAAAACAGTTCTACTGGTaGAGCTACAGCGTTCCCTTCTCTCAGGTACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKGLVLGKQFYW*SYSVPFSQVLL Trigger: GAGCAGTACCTGAGAGAAGGGAACGCTGTAGCTGCACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS GCA 72 bp | GTCAAAATGCACCCGGACTCGGTCTTCCACAATGTCTaGAATGGTTGCCACACACATCAAGCAAGGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VKMHPDSVFHNV*NGCHTHQARVP Trigger: AGGAACCCTTGCTTGATGTGTGTGGCAACCATTGCAGACATTGTGGAAGACCGAGTCCGGGTGCATTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CCA 72 bp | CTCCGGAAAGGATTGGTCCTTGGAAAACAGTTCTACTaGTGCAGCTACAGCGTTCCCTTCTCTCAGGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: LRKGLVLGKQFY*CSYSVPFSQVL Trigger: CAGTACCTGAGAGAAGGGAACGCTGTAGCTGCACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
||
| CDS CCA 72 bp | TGCACCTGTGCAGCTGAGTACTCACCTCTGCAGCTATaGGTCACCATGGCTCTGAAGAGATTATCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: CTCAAEYSPLQL*VTMALKRLSKS Trigger: TGACTTGGATAATCTCTTCAGAGCCATGGTGACCCATAGCTGCAGAGGTGAGTACTCAGCTGCACAGGTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093007.6 |
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| CDS CAA 72 bp | ATAATCCCGAGGGATATGCAGTTCATGCTTGGTCTTTaGACACCATCCCACTGGGTGAATGTCCGGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: IIPRDMQFMLGL*TPSHWVNVRGT Trigger: GGTTCCCCGGACATTCACCCAGTGGGATGGTGTCAAAAGACCAAGCATGAACTGCATATCCCTCGGGATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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| CDS CAA 72 bp | GACATGCAGGTTGACCTGGAAGGATTTTCACATGCTTaGACCCATATGGCACTTCCAGCGGATGCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DMQVDLEGFSHA*THMALPADALS Trigger: TGACAGGGCATCCGCTGGAAGTGCCATATGGGTCAAAGCATGTGAAAATCCTTCCAGGTCAACCTGCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
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| CDS CCA 72 bp | ATGCAGTTCATGCTTGGTCTTTTGACACCATCCCACTaGGTGAATGTCCGGGGAACCAGCATTGGTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MQFMLGLLTPSH*VNVRGTSIGPK Trigger: TTTTGGACCAATGCTGGTTCCCCGGACATTCACCCAGTGGGATGGTGTCAAAAGACCAAGCATGAACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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| CDS CCA 72 bp | AGAAGCTCGCAGGTAGTCTGTCCAGGAAAACTTATCTaGATGAGGATAACCTTGGGGAGCGACCAGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSSQVVCPGKLI*MRITLGSDQSS Trigger: AGAACTCTGGTCGCTCCCCAAGGTTATCCTCATCCAGATAAGTTTTCCTGGACAGACTACCTGCGAGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 |
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| CDS CCA 72 bp | GAAAGCCATTTTCATGCTCCGGAAAGGATTGGTCCTTaGAAAACAGTTCTACTGGTGCAGCTACAGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ESHFHAPERIGP*KTVLLVQLQRS Trigger: GGAACGCTGTAGCTGCACCAGTAGAACTGTTTTCCAAGGACCAATCCTTTCCGGAGCATGAAAATGGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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| CDS CAA 90 bp | ATCTTTTCTATAATCCCGAGGGATATGCAGTTCATGCTTGGTCTTTaGACACCATCCCACTGGGTGAATGTCCGGGGAACCAGCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: IFSIIPRDMQFMLGL*TPSHWVNVRGTSIG Trigger: ACCAATGCTGGTTCCCCGGACATTCACCCAGTGGGATGGTGTCAAAAGACCAAGCATGAACTGCATATCCCTCGGGATTATAGAAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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| CDS GCA 72 bp | AAAGCACACAGAACACAGATGGACGTCGGGCATCAATaGCTTCCAACCTCATTCCAACCTGAAAGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: KAHRTQMDVGHQ*LPTSFQPESHF Trigger: AAAATGGCTTTCAGGTTGGAATGAGGTTGGAAGGCATTGATGCCCGACGTCCATCTGTGTTCTGTGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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| CDS CCA 72 bp | CTTTTCTATAATCCCGAGGGATATGCAGTTCATGCTTaGTCTTTTGACACCATCCCACTGGGTGAATGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LFYNPEGYAVHA*SFDTIPLGECP Trigger: CGGACATTCACCCAGTGGGATGGTGTCAAAAGACCAAGCATGAACTGCATATCCCTCGGGATTATAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093007.6 ENSMUST00000124543.8 ENSMUST00000139383.8 |
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