Pregenerated sensors for L3MBTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035576Ensembl transcript IDs: ENSMUST00000035751.12, ENSMUST00000124264.3, ENSMUST00000156954.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TACGGGTTCGCTGCCAGCCACCCGCTCCAGGGCACCCACGTGGACTaGCTCCCGGGGATAGGGCACATCCAGGGCAGTGCTAGGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: YGFAASHPLQGTHVD*LPGIGHIQGSARQT Trigger: GGTCTGCCTAGCACTGCCCTGGATGTGCCCTATCCCCGGGAGCCAGTCCACGTGGGTGCCCTGGAGCGGGTGGCTGGCAGCGAACCCGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS GCA 90 bp | GGTAGGAATAATGAAGGCGGTTGTAGGCAGCTGAGGGTGGGGACCTaGGCTGTCTCTGGCCACCAGGTGCACGTTGACCTCCCCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRNNEGGCRQLRVGT*AVSGHQVHVDLPCG Trigger: TCCACAGGGGAGGTCAACGTGCACCTGGTGGCCAGAGACAGCGCAGGTCCCCACCCTCAGCTGCCTACAACCGCCTTCATTATTCCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS CCA 90 bp | AGCCCACAGGTGGAGTACTGTGGCTCTGGCTTACAAACAGGTGCTTaGGGGCTGCCTGAGCTTTCGTGCTGCGCAGGTACTGGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPQVEYCGSGLQTGA*GLPELSCCAGTGSS Trigger: GCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCACCTGTTTGTAAGCCAGAGCCACAGTACTCCACCTGTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 90 bp | GCTGAGGGTGGGGACCTGCGCTGTCTCTGGCCACCAGGTGCACGTTaGCCTCCCCTGTGGAAGACCCTTTCACTGTCCTTAGTATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AEGGDLRCLWPPGAR*PPLWKTLSLSLVSP Trigger: TGGAGATACTAAGGACAGTGAAAGGGTCTTCCACAGGGGAGGTCAACGTGCACCTGGTGGCCAGAGACAGCGCAGGTCCCCACCCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS TCA 90 bp | AGCACACAGAGAGTGGGCGATCAGCGTGGGTCGGCAAGGTGGACATaGAGAGGGACTGGTGTACCACACTGGGAGGGAGGGCTTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: STQRVGDQRGSARWT*RGTGVPHWEGGLGD Trigger: ATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTCTCTGTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 90 bp | GGAGTACTGTGGCTCTGGCTTACAAACAGGTGCTTGGGGGCTGCCTaGGCTTTCGTGCTGCGCAGGTACTGGCTCCAGCTGAACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVLWLWLTNRCLGAA*AFVLRRYWLQLNSS Trigger: AGAGGAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCACCTGTTTGTAAGCCAGAGCCACAGTACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 90 bp | AGGTGGAGTACTGTGGCTCTGGCTTACAAACAGGTGCTTGGGGGCTaGCTGAGCTTTCGTGCTGCGCAGGTACTGGCTCCAGCTGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RWSTVALAYKQVLGG*LSFRAAQVLAPAEL Trigger: GAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCACCTGTTTGTAAGCCAGAGCCACAGTACTCCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | AGTGGGCGATCAGCGTGGGTCGGCAAGGTGGACATGAAGAGGGACTaGTGTACCACACTGGGAGGGAGGGCTTGGAGATCTTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGRSAWVGKVDMKRD*CTTLGGRAWRSSSG Trigger: TCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | AGCTTGCAGTGTTGCTCCCAGCACACAGAGAGTGGGCGATCAGCGTaGGTCGGCAAGGTGGACATGAAGAGGGACTGGTGTACCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQCCSQHTESGRSA*VGKVDMKRDWCTTL Trigger: CAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTCTCTGTGTGCTGGGAGCAACACTGCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 90 bp | TGGGGGCTGCCTGAGCTTTCGTGCTGCGCAGGTACTGGCTCCAGCTaGACTCCTCTTCCTTGTAACCTTTGGGAAGCTGCAGCTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WGLPELSCCAGTGSS*TPLPCNLWEAAACV Trigger: GACACAAGCTGCAGCTTCCCAAAGGTTACAAGGAAGAGGAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | TTGTGGAGGGGTGAGCGGCTTTCCTTGCTTCTGGCACCAGCCTACTaGGTGGATGTAGGGGCTGCTGGGATCACACCAGTAGTCGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LWRGERLSLLLAPAY*VDVGAAGITPVVVS Trigger: ACTTACGACTACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAAAGCCGCTCACCCCTCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 90 bp | GGGATAGGGCACATCCAGGGCAGTGCTAGGCAGACCAAGCGTAGCTaGATTGGTAGGAATAATGAAGGCGGTTGTAGGCAGCTGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GIGHIQGSARQTKRS*IGRNNEGGCRQLRV Trigger: CACCCTCAGCTGCCTACAACCGCCTTCATTATTCCTACCAATGCAGCTACGCTTGGTCTGCCTAGCACTGCCCTGGATGTGCCCTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS GCA 90 bp | GTACCACACTGGGAGGGAGGGCTTGGAGATCTTCTTCTGGAATCTTaGGATACTTTGGAGGGCGTCCAATCCGGCCTTGATGGCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPHWEGGLGDLLLES*DTLEGVQSGLDGEA Trigger: AGCCTCGCCATCAAGGCCGGATTGGACGCCCTCCAAAGTATCGCAAGATTCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | CTTTGGAGGGCGTCCAATCCGGCCTTGATGGCGAGGCTTTTTCCTTaGGGACAAATTAGACGGGTTCTTCTTCCTGGCTGCGGTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LWRASNPALMARLFP*GQIRRVLLPGCGLR Trigger: TCGGAGACCGCAGCCAGGAAGAAGAACCCGTCTAATTTGTCCCCAAGGAAAAAGCCTCGCCATCAAGGCCGGATTGGACGCCCTCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 90 bp | GCTTTCCTTGCTTCTGGCACCAGCCTACTGGGTGGATGTAGGGGCTaGTGGGATCACACCAGTAGTCGTAAGTATCGCCCCAGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFLASGTSLLGGCRG*WDHTSSRKYRPSHQ Trigger: TTGATGACTGGGGCGATACTTACGACTACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 90 bp | AGGCTTTTTCCTTGGGGACAAATTAGACGGGTTCTTCTTCCTGGCTaGGGTCTCCGAGTCGGACAGTTCCGCTTTCAGCCGGCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLFPWGQIRRVLLPG*GLRVGQFRFQPALV Trigger: AACCAGAGCCGGCTGAAAGCGGAACTGTCCGACTCGGAGACCGCAGCCAGGAAGAAGAACCCGTCTAATTTGTCCCCAAGGAAAAAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | CATCAAAGTGGAGCTTTATCCGATGATCCTCCACATCTTCCACACTaGCTACCCGGATCAGTGCTGGGTTCCGGCGGTCTACAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HQSGALSDDPPHLPH*LPGSVLGSGGLQPP Trigger: TGGAGGCTGTAGACCGCCGGAACCCAGCACTGATCCGGGTAGCCAGTGTGGAAGATGTGGAGGATCATCGGATAAAGCTCCACTTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | GGACTGGTGTACCACACTGGGAGGGAGGGCTTGGAGATCTTCTTCTaGAATCTTGCGATACTTTGGAGGGCGTCCAATCCGGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLVYHTGREGLEIFF*NLAILWRASNPALM Trigger: CATCAAGGCCGGATTGGACGCCCTCCAAAGTATCGCAAGATTCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 90 bp | TTCCTTGCTTCTGGCACCAGCCTACTGGGTGGATGTAGGGGCTGCTaGGATCACACCAGTAGTCGTAAGTATCGCCCCAGTCATCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLASGTSLLGGCRGC*DHTSSRKYRPSHQS Trigger: ACTTTGATGACTGGGGCGATACTTACGACTACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 90 bp | TCGTCTTTGAAGAGGCGCGCTTGGTCCTCAGAGCCCGTCAAGGTCTaGACGAAGCCAAAGACCTCTTCAATGGTCCACTTAGAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLKRRAWSSEPVKV*TKPKTSSMVHLETV Trigger: CACAGTCTCTAAGTGGACCATTGAAGAGGTCTTTGGCTTCGTTCAGACCTTGACGGGCTCTGAGGACCAAGCGCGCCTCTTCAAAGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 90 bp | CTCCTATCATGTTCAGTGGCGCGTACTCATTTATCCGGAACCGCATaGCGCTACCAGGTAAAGGTGCAGAAACGCCAGTCCAATCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSCSVARTHLSGTA*RYQVKVQKRQSNPE Trigger: TTCTGGATTGGACTGGCGTTTCTGCACCTTTACCTGGTAGCGGCATGCGGTTCCGGATAAATGAGTACGCGCCACTGAACATGATAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS TCA 90 bp | TCTCCTTGCTTCACAGCCTCCGGCTCTGACTCCTCTGATGGGCTCTaGTACTCCTTATGTTTCCTCTTTTTCATGGGTTTCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCFTASGSDSSDGL*YSLCFLFFMGFRSS Trigger: TGAGCTCCTGAAACCCATGAAAAAGAGGAAACATAAGGAGTATCAGAGCCCATCAGAGGAGTCAGAGCCGGAGGCTGTGAAGCAAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000124264.3 |
||
| CDS CCA 72 bp | GCTGCCAGCCACCCGCTCCAGGGCACCCACGTGGACTaGCTCCCGGGGATAGGGCACATCCAGGGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASHPLQGTHVD*LPGIGHIQGSA Trigger: AGCACTGCCCTGGATGTGCCCTATCCCCGGGAGCCAGTCCACGTGGGTGCCCTGGAGCGGGTGGCTGGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS TCA 72 bp | AGAGTGGGCGATCAGCGTGGGTCGGCAAGGTGGACATaGAGAGGGACTGGTGTACCACACTGGGAGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVGDQRGSARWT*RGTGVPHWEGG Trigger: CCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 72 bp | AATGAAGGCGGTTGTAGGCAGCTGAGGGTGGGGACCTaGGCTGTCTCTGGCCACCAGGTGCACGTTGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: NEGGCRQLRVGT*AVSGHQVHVDL Trigger: GAGGTCAACGTGCACCTGGTGGCCAGAGACAGCGCAGGTCCCCACCCTCAGCTGCCTACAACCGCCTTCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS CCA 72 bp | GTCTCCGAGTCGGACAGTTCCGCTTTCAGCCGGCTCTaGTTTTTCTCGGCCAGCGGGCAGCCAGAGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VSESDSSAFSRL*FFSASGQPERQ Trigger: TTGCCTCTCTGGCTGCCCGCTGGCCGAGAAAAACCAGAGCCGGCTGAAAGCGGAACTGTCCGACTCGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | GGGGACCTGCGCTGTCTCTGGCCACCAGGTGCACGTTaGCCTCCCCTGTGGAAGACCCTTTCACTGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GDLRCLWPPGAR*PPLWKTLSLSL Trigger: TAAGGACAGTGAAAGGGTCTTCCACAGGGGAGGTCAACGTGCACCTGGTGGCCAGAGACAGCGCAGGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS TCA 72 bp | TTTTTCTCGGCCAGCGGGCAGCCAGAGAGGCAATGGTaGGCTGTGAACTTGCCAGTGACATGGCCGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FFSASGQPERQW*AVNLPVTWPEP Trigger: CGGCTCCGGCCATGTCACTGGCAAGTTCACAGCTCACCATTGCCTCTCTGGCTGCCCGCTGGCCGAGAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 72 bp | GGGGTGGGCTCTCGCTCTGCGTCTTTTCCTTCTCCTTaGTTCACAGCCTCCGGCTCTGACTCCTCTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVGSRSASFPSP*FTASGSDSSDG Trigger: CCCATCAGAGGAGTCAGAGCCGGAGGCTGTGAAGCAAGGAGAAGGAAAAGACGCAGAGCGAGAGCCCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000124264.3 |
||
| CDS CCA 72 bp | ATGGGTGACTGCCTGGGAGTCCTGGAAGAGGCTAACTaGGGCTGTGACGGCCTTCTGCTCCTCCAGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MGDCLGVLEEAN*GCDGLLLLQVG Trigger: TCCTACCTGGAGGAGCAGAAGGCCGTCACAGCCCCAGTTAGCCTCTTCCAGGACTCCCAGGCAGTCACCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CAA 72 bp | TGGGGACCTGCGCTGTCTCTGGCCACCAGGTGCACGTaGACCTCCCCTGTGGAAGACCCTTTCACTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WGPALSLATRCT*TSPVEDPFTVL Trigger: AAGGACAGTGAAAGGGTCTTCCACAGGGGAGGTCAACGTGCACCTGGTGGCCAGAGACAGCGCAGGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS TCA 72 bp | GCATTGGTAGGAATAATGAAGGCGGTTGTAGGCAGCTaGGGGTGGGGACCTGCGCTGTCTCTGGCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALVGIMKAVVGS*GWGPALSLATR Trigger: CCTGGTGGCCAGAGACAGCGCAGGTCCCCACCCTCAGCTGCCTACAACCGCCTTCATTATTCCTACCAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS GCA 72 bp | GCTTCTGGCACCAGCCTACTGGGTGGATGTAGGGGCTaGTGGGATCACACCAGTAGTCGTAAGTATCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGTSLLGGCRG*WDHTSSRKYRP Trigger: GGGGCGATACTTACGACTACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | GGTGAGCGGCTTTCCTTGCTTCTGGCACCAGCCTACTaGGTGGATGTAGGGGCTGCTGGGATCACACCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GERLSLLLAPAY*VDVGAAGITPV Trigger: TACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAAAGCCGCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | TCAGCGTGGGTCGGCAAGGTGGACATGAAGAGGGACTaGTGTACCACACTGGGAGGGAGGGCTTGGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SAWVGKVDMKRD*CTTLGGRAWRS Trigger: AGATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | TGTTGCTCCCAGCACACAGAGAGTGGGCGATCAGCGTaGGTCGGCAAGGTGGACATGAAGAGGGACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCSQHTESGRSA*VGKVDMKRDWC Trigger: ACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTCTCTGTGTGCTGGGAGCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 72 bp | CCTTGGGGACAAATTAGACGGGTTCTTCTTCCTGGCTaGGGTCTCCGAGTCGGACAGTTCCGCTTTCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PWGQIRRVLLPG*GLRVGQFRFQP Trigger: CGGCTGAAAGCGGAACTGTCCGACTCGGAGACCGCAGCCAGGAAGAAGAACCCGTCTAATTTGTCCCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | CGGGCTTCGTGGTCGCTCCACTCCTATCATGTTCAGTaGCGCGTACTCATTTATCCGGAACCGCATGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RASWSLHSYHVQ*RVLIYPEPHAA Trigger: AGCGGCATGCGGTTCCGGATAAATGAGTACGCGCCACTGAACATGATAGGAGTGGAGCGACCACGAAGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS CCA 72 bp | CAGGACCAGCCGTCCTTCTTCTCACTGGACACCAGCTaGCTTCTGCTCCACTCTTCATTCTCCGGGGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QDQPSFFSLDTS*LLLHSSFSGVL Trigger: TAGCACCCCGGAGAATGAAGAGTGGAGCAGAAGCCAGCTGGTGTCCAGTGAGAAGAAGGACGGCTGGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | GTGGAGTACTGTGGCTCTGGCTTACAAACAGGTGCTTaGGGGCTGCCTGAGCTTTCGTGCTGCGCAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: VEYCGSGLQTGA*GLPELSCCAGT Trigger: AGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCACCTGTTTGTAAGCCAGAGCCACAGTACTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | TCTGGCACCAGCCTACTGGGTGGATGTAGGGGCTGCTaGGATCACACCAGTAGTCGTAAGTATCGCCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGTSLLGGCRGC*DHTSSRKYRPS Trigger: ACTGGGGCGATACTTACGACTACTGGTGTGATCCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | CAACAGCTTGCAGTGTTGCTCCCAGCACACAGAGAGTaGGCGATCAGCGTGGGTCGGCAAGGTGGACATGAA | + |
|
Preference number: 6 (lower is better) Translates to: QQLAVLLPAHRE*AISVGRQGGHE Trigger: TTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTCTCTGTGTGCTGGGAGCAACACTGCAAGCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CAA 72 bp | CTCGCCGTCAATCATCTCGTCTTTGAAGAGGCGCGCTaGGTCCTCAGAGCCCGTCAAGGTCTGAACGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAVNHLVFEEAR*VLRARQGLNEA Trigger: GGCTTCGTTCAGACCTTGACGGGCTCTGAGGACCAAGCGCGCCTCTTCAAAGACGAGATGATTGACGGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | GACCTCTTCAATGGTCCACTTAGAGACTGTGGAGGCTaGGATGCCCGCCACTCCTGGCAACAGCTTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DLFNGPLRDCGG*DARHSWQQLAV Trigger: CACTGCAAGCTGTTGCCAGGAGTGGCGGGCATCTCAGCCTCCACAGTCTCTAAGTGGACCATTGAAGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | GGAGCTTTATCCGATGATCCTCCACATCTTCCACACTaGCTACCCGGATCAGTGCTGGGTTCCGGCGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GALSDDPPHLPH*LPGSVLGSGGL Trigger: TAGACCGCCGGAACCCAGCACTGATCCGGGTAGCCAGTGTGGAAGATGTGGAGGATCATCGGATAAAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | CCTGAGCTTTCGTGCTGCGCAGGTACTGGCTCCAGCTaGACTCCTCTTCCTTGTAACCTTTGGGAAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PELSCCAGTGSS*TPLPCNLWEAA Trigger: TGCAGCTTCCCAAAGGTTACAAGGAAGAGGAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 72 bp | TGTTCAGTGGCGCGTACTCATTTATCCGGAACCGCATaGCGCTACCAGGTAAAGGTGCAGAAACGCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSVARTHLSGTA*RYQVKVQKRQS Trigger: GGACTGGCGTTTCTGCACCTTTACCTGGTAGCGGCATGCGGTTCCGGATAAATGAGTACGCGCCACTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS CCA 72 bp | GCGTCCAATCCGGCCTTGATGGCGAGGCTTTTTCCTTaGGGACAAATTAGACGGGTTCTTCTTCCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASNPALMARLFP*GQIRRVLLPGC Trigger: GCAGCCAGGAAGAAGAACCCGTCTAATTTGTCCCCAAGGAAAAAGCCTCGCCATCAAGGCCGGATTGGACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | ACCAGCCAGCGGGATGAATATCAGGGGAGTTGGCATTaGCCCAGAAGTCGTGGCACTCAGAGTAGCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSQRDEYQGSWH*PRSRGTQSSHQ Trigger: TTGATGGCTACTCTGAGTGCCACGACTTCTGGGTCAATGCCAACTCCCCTGATATTCATCCCGCTGGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | AAGAGGCGCGCTTGGTCCTCAGAGCCCGTCAAGGTCTaGACGAAGCCAAAGACCTCTTCAATGGTCCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: KRRAWSSEPVKV*TKPKTSSMVHL Trigger: TAAGTGGACCATTGAAGAGGTCTTTGGCTTCGTTCAGACCTTGACGGGCTCTGAGGACCAAGCGCGCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS GCA 72 bp | CACATCCAGGGCAGTGCTAGGCAGACCAAGCGTAGCTaGATTGGTAGGAATAATGAAGGCGGTTGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HIQGSARQTKRS*IGRNNEGGCRQ Trigger: CTGCCTACAACCGCCTTCATTATTCCTACCAATGCAGCTACGCTTGGTCTGCCTAGCACTGCCCTGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000156954.8 |
||
| CDS CCA 72 bp | TACCACACTGGGAGGGAGGGCTTGGAGATCTTCTTCTaGAATCTTGCGATACTTTGGAGGGCGTCCAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: YHTGREGLEIFF*NLAILWRASNP Trigger: CGGATTGGACGCCCTCCAAAGTATCGCAAGATTCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | GAGTTCTCTACTATGACTGACCGCTTCTGGAAAGGCTaGGAGCATCGGTCTCCCGATGAACCAACGTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: EFSTMTDRFWKG*EHRSPDEPTSR Trigger: CCTAGACGTTGGTTCATCGGGAGACCGATGCTCTCAGCCTTTCCAGAAGCGGTCAGTCATAGTAGAGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035751.12 ENSMUST00000124264.3 ENSMUST00000156954.8 |
||
| CDS CCA 72 bp | TCAGCCACAGTGAGGATGAAGTACATTGACGGGTGTTaGGGGTCAATGCCTTCCAGCTTCATGCCCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SATVRMKYIDGC*GSMPSSFMPSL Trigger: CAAACTGGGCATGAAGCTGGAAGGCATTGACCCCCAACACCCGTCAATGTACTTCATCCTCACTGTGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CAA 72 bp | GAAGAGGGACTGGTGTACCACACTGGGAGGGAGGGCTaGGAGATCTTCTTCTGGAATCTTGCGATACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EEGLVYHTGREG*EIFFWNLAILW Trigger: CCAAAGTATCGCAAGATTCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS CCA 72 bp | AAGAGGGACTGGTGTACCACACTGGGAGGGAGGGCTTaGAGATCTTCTTCTGGAATCTTGCGATACTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRDWCTTLGGRA*RSSSGILRYFG Trigger: TCCAAAGTATCGCAAGATTCCAGAAGAAGATCTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035751.12 |
||
| CDS TCA 72 bp | TTCACAGCCTCCGGCTCTGACTCCTCTGATGGGCTCTaGTACTCCTTATGTTTCCTCTTTTTCATGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTASGSDSSDGL*YSLCFLFFMGF Trigger: GAAACCCATGAAAAAGAGGAAACATAAGGAGTATCAGAGCCCATCAGAGGAGTCAGAGCCGGAGGCTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035751.12 ENSMUST00000124264.3 |
||