Pregenerated sensors for L2HGDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020988Ensembl transcript IDs: ENSMUST00000021370.10, ENSMUST00000223387.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCTGAGAGAACGCTCGGGAGGACAGACAAAGGGTCTCCCGAAGTaGTGCCTGTTTCCATGGCCAGGCTGCCAGTTCTCCACTTATATT | + |
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Preference number: 1 (lower is better) Translates to: NLRERSGGQTKGLPK*CLFPWPGCQFSTYI Trigger: AATATAAGTGGAGAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTGTCCTCCCGAGCGTTCTCTCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 90 bp | GACGCTTGTGTCACTGACGTCTTAGAACAGAGACGTGCTCTGCAGTaGTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: DACVTDVLEQRRALQ*FFWNQLLWRTTRAW Trigger: CCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCACTGCAGAGCACGTCTCTGTTCTAAGACGTCAGTGACACAAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 90 bp | TCTCCTTTTCCACCACACCAATCGAAAGTCCAGGATGTTTCAGGATaGGCGTTCTGGCAGAGGCAAGGCCCACAATTCCACCTCCAACGA | + |
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Preference number: 1 (lower is better) Translates to: SPFPPHQSKVQDVSG*AFWQRQGPQFHLQR Trigger: TCGTTGGAGGTGGAATTGTGGGCCTTGCCTCTGCCAGAACGCTCATCCTGAAACATCCTGGACTTTCGATTGGTGTGGTGGAAAAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| 3UTR CCA 90 bp | GATGAGGGCTGCGCCTTCTACACACAATTTAGCCTTCAGAGATTCTaGTTTATAGTAAATACCACTGTGTATGACACCGCTGTTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: DEGCAFYTQFSLQRF*FIVNTTVYDTAVVS Trigger: GGACACAACAGCGGTGTCATACACAGTGGTATTTACTATAAACCAGAATCTCTGAAGGCTAAATTGTGTGTAGAAGGCGCAGCCCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| 3UTR GCA 90 bp | AGGTGGCTTGGGGAAAGCCTAATAAACCTGAAGTTTCAGGACAGGTaGCGATACACTTCGTTTCTTTGTTCACAAGAATATGGACCTGAA | + |
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Preference number: 1 (lower is better) Translates to: RWLGESLINLKFQDR*RYTSFLCSQEYGPE Trigger: TTCAGGTCCATATTCTTGTGAACAAAGAAACGAAGTGTATCGGCACCTGTCCTGAAACTTCAGGTTTATTAGGCTTTCCCCAAGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CCA 90 bp | AGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGTaGCAGGAAAAGGGTTCCCTATCAACATGCACCCCCTCTCATACA | + |
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Preference number: 1 (lower is better) Translates to: SLINVPVRAEVKRNK*QEKGSLSTCTPSHT Trigger: TGTATGAGAGGGGGTGCATGTTGATAGGGAACCCTTTTCCTGCCACTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 90 bp | TCACGTGGAGTGATGGTGCCACACTGCGGGGCTGCAGTAAAAGACTaGCTTTCTTCTATGCTACTTAGAAATGTGAAATTTCATTTATTT | + |
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Preference number: 1 (lower is better) Translates to: SRGVMVPHCGAAVKD*LSSMLLRNVKFHLF Trigger: AAATAAATGAAATTTCACATTTCTAAGTAGCATAGAAGAAAGTCAGTCTTTTACTGCAGCCCCGCAGTGTGGCACCATCACTCCACGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGACAGACAGGTCTCCCGAAGTGCTaGCTGTTTCCATGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLTRKTKINLRERSGGQTGLPKC*LFPWPG Trigger: GCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACC...TGTCTGTCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAACAGAGACGTGCTCTGCAGTGCTTCTTCTGGAATCAGCTGCTATGGAGGAGCCCTTCCCAGATTaGGGTGGCTTGGGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRTETCSAVLLLESAAMEEPFPD*GGLGKA Trigger: GGCTTTCCCCAAGCCACCTCAATCTGGGAAGGGCTC...CTCCATAGCAGCTGATTCCAGAAGAAGCACTGCAGAGCACGTCTCTGTTCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCGCTAGTCACGTGGAGTaGTGGTGCCACACTGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: ICPAQGLSNCLIYLPGICASHVE*WCHTAG Trigger: CCCCGCAGTGTGGCACCATCACTCCACGTGACTAGC...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CCA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCTGCTGCCTGTTTCCATaGCCAGGCTGCCAGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ICPAQGLSNCLIYLPGICCCLFP*PGCQFS Trigger: GGAGAACTGGCAGCCTGGCCATGGAAACAGGCAGCA...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CAA 90 bp | GGTTCCCTATCAACATGCACCCCCTCTCATACATCCATCACAGTGTaGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSLSTCTPSHTSITV*TRKTKINLRERSGG Trigger: TCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACACTGTGATGGATGTATGAGAGGGGGTGCATGTTGATAGGGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGTATGCTGCCTCTCCAACTaGAGCCCACAATATGTATCC | + |
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Preference number: 2 (lower is better) Translates to: ASSGISCYGGPRGLGFSVCCLSN*SPQYVS Trigger: GGATACATATTGTGGGCTTCAGTTGGAGAGGCAGCA...TACAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCACATTGCCTGTAGGGAATTCCCTTGAGGTTGCAGTACTCATAGATGAGTTGTGTCCAGTCTGGTaGAGAGCTAAATCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LATLPVGNSLEVAVLIDELCPVW*RAKSFS Trigger: GGAGAAAGATTTAGCTCTTCACCAGACTGGACACAA...CTCATCTATGAGTACTGCAACCTCAAGGGAATTCCCTACAGGCAATGTGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| 3UTR-3UTR GCA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCTTTCCATGGCCAGGCTaGCAGTTCTCCACTTATATT | + |
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Preference number: 2 (lower is better) Translates to: ICPAQGLSNCLIYLPGICFPWPG*QFSTYI Trigger: AATATAAGTGGAGAACTGGCAGCCTGGCCATGGAAA...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTAGATAGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGGTGATGGTGCCACACTaGGGGGCTGCAGTAAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLDSLINVPVRAEVKRNKVMVPH*GAAVKD Trigger: GTCTTTTACTGCAGCCCCGCAGTGTGGCACCATCAC...CTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCTATCTAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTAGATAGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGGCCACACTGCGGGGCTaGAGTAAAAGACTGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLDSLINVPVRAEVKRNKATLRG*SKRLTF Trigger: GAAAGTCAGTCTTTTACTGCAGCCCCGCAGTGTGGC...CTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCTATCTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR GCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCCCACACATGCGCACGTaGACACACAGTATGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: EDSHLIHKVTQPYYDACVPHMRT*THSMAL Trigger: AAGTGCCATACTGTGTGTGCACGTGCGCATGTGTGG...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGGATATGCTGCCTCTCCAACTGAAGCCCACAATATGTATCCTTTTAAATTATACACAGTAACAATGTaGTACTACCCACACATGCGC | + |
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Preference number: 2 (lower is better) Translates to: LGYAASPTEAHNMYPFKLYTVTM*YYPHMR Trigger: GCGCATGTGTGGGTAGTACCACATTGTTACTGTGTA...TAATTTAAAAGGATACATATTGTGGGCTTCAGTTGGAGAGGCAGCATATCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR GCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCAACAGAGACGTGCTCTaGAGTGCTTCTTCTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: EDSHLIHKVTQPYYDACVNRDVL*SASSGI Trigger: GATTCCAGAAGAAGCACTGCAGAGCACGTCTCTGTT...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCTGTACCAGTAAGGGCTaGAGTGAAGAGAAACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: EDSHLIHKVTQPYYDACVCTSKG*SEEKQV Trigger: CACTTGTTTCTCTTCACTTCAGCCCTTACTGGTACA...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CCA 90 bp | TACCACGTTAATGAAGTAAATAGGAAGGATATAAGGCACTTTCGCGGTTTACAACAGATTGAGGTGGCTTaGGGAAAGCCTAATAAACCT | + |
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Preference number: 2 (lower is better) Translates to: YHVNEVNRKDIRHFRGLQQIEVA*GKPNKP Trigger: AGGTTTATTAGGCTTTCCCCAAGCCACCTCAATCTG...TTGTAAACCGCGAAAGTGCCTTATATCCTTCCTATTTACTTCATTAACGTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR TCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCGCTGCAGTAAAAGACTaGCTTTCTTCTATGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: EDSHLIHKVTQPYYDACVAAVKD*LSSMLL Trigger: AAGTAGCATAGAAGAAAGTCAGTCTTTTACTGCAGC...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 72 bp | CGCTCGGGAGGACAGACAAAGGGTCTCCCGAAGTGCTaGCTGTTTCCATGGCCAGGCTGCCAGTTCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: RSGGQTKGLPKC*LFPWPGCQFST Trigger: AGTGGAGAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTGTCCTCCCGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 72 bp | GAACGCTCGGGAGGACAGACAAAGGGTCTCCCGAAGTaGTGCCTGTTTCCATGGCCAGGCTGCCAGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: ERSGGQTKGLPK*CLFPWPGCQFS Trigger: GGAGAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTGTCCTCCCGAGCGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 72 bp | CCACCACACCAATCGAAAGTCCAGGATGTTTCAGGATaGGCGTTCTGGCAGAGGCAAGGCCCACAATTCCAC | + |
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Preference number: 3 (lower is better) Translates to: PPHQSKVQDVSG*AFWQRQGPQFH Trigger: GTGGAATTGTGGGCCTTGCCTCTGCCAGAACGCTCATCCTGAAACATCCTGGACTTTCGATTGGTGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| 3UTR CCA 72 bp | GTCTTAGAACAGAGACGTGCTCTGCAGTGCTTCTTCTaGAATCAGCTGCTATGGAGGACCACGAGGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VLEQRRALQCFF*NQLLWRTTRAW Trigger: CCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCACTGCAGAGCACGTCTCTGTTCTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 72 bp | AGAGACGTGCTCTGCAGTGCTTCTTCTGGAATCAGCTaGTATGGAGGACCACGAGGGCTTGGTTTTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: RDVLCSASSGIS*YGGPRGLGFSV Trigger: TACAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCACTGCAGAGCACGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CAA 90 bp | CAGACAAAGGGTCTCCCGAAGTGCTGCCTGTTTCCATGGCCAGGCTGCCAGTTCATACACTTCGTTTCTTaGTTCACAAGAATATGGACC | + |
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Preference number: 3 (lower is better) Translates to: QTKGLPKCCLFPWPGCQFIHFVS*FTRIWT Trigger: GGTCCATATTCTTGTGAACAAAGAAACGAAGTGTAT...GAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CCA 72 bp | GCACTCTGTAAGAGCCCTTCCCAGATTGAGGTGGCTTaGGGAAAGCCTAATAAACCTGAAGTTTCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: ALCKSPSQIEVA*GKPNKPEVSGQ Trigger: CTGTCCTGAAACTTCAGGTTTATTAGGCTTTCCCCAAGCCACCTCAATCTGGGAAGGGCTCTTACAGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CCA 72 bp | CCCAAGCACTCTGTAAGAGCCCTTCCCAGATTGAGGTaGCTTGGGGAAAGCCTAATAAACCTGAAGTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PKHSVRALPRLR*LGESLINLKFQ Trigger: CTGAAACTTCAGGTTTATTAGGCTTTCCCCAAGCCACCTCAATCTGGGAAGGGCTCTTACAGAGTGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CCA 72 bp | CAGACAAAGGGTCTCCCGAAGTGCTGCCTGTTTCCATaGCCAGGCTGCCAGTTCTCCACTTATATTTCTATT | + |
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Preference number: 3 (lower is better) Translates to: QTKGLPKCCLFP*PGCQFSTYISI Trigger: AATAGAAATATAAGTGGAGAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 72 bp | AGAAACAAGTGGCAGGAAAAGGGTTCCCTATCAACATaGACCCCCTCTCATACATCCATCACAGTGTTGACG | + |
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Preference number: 3 (lower is better) Translates to: RNKWQEKGSLST*TPSHTSITVLT Trigger: CGTCAACACTGTGATGGATGTATGAGAGGGGGTGCATGTTGATAGGGAACCCTTTTCCTGCCACTTGTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR GCA 72 bp | AGTGTTTCAATATGCCCAGCCCAAGGGTTGAGTAACTaGCTCATCTATTTACCTGGGATATGCTGCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SVSICPAQGLSN*LIYLPGICCLS Trigger: GGAGAGGCAGCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATATTGAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR CCA 72 bp | AATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGTaGCAGGAAAAGGGTTCCCTATCAACATGCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: NVPVRAEVKRNK*QEKGSLSTCTP Trigger: GGGGGTGCATGTTGATAGGGAACCCTTTTCCTGCCACTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CAA 90 bp | CTGGGATATGCTGCCTCTCCAACTGAAGCCCACAATATGTATCCTTTTAAATTAAGAGCCCTTCCCAGATaGAGGTGGCTTGGGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LGYAASPTEAHNMYPFKLRALPR*RWLGES Trigger: GCTTTCCCCAAGCCACCTCAATCTGGGAAGGGCTCT...TAATTTAAAAGGATACATATTGTGGGCTTCAGTTGGAGAGGCAGCATATCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR-3UTR CAA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCACATCCATCACAGTGTaGACGAGGAAAACCAAGATC | + |
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Preference number: 3 (lower is better) Translates to: ICPAQGLSNCLIYLPGICTSITV*TRKTKI Trigger: GATCTTGGTTTTCCTCGTCAACACTGTGATGGATGT...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 72 bp | AAGGGACTGAGGTGTGAGACACATAAAATTACACAGTaGCGCACCCAGGGTCAGGATTTTAAACTGCACTTA | + |
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Preference number: 3 (lower is better) Translates to: KGLRCETHKITQ*RTQGQDFKLHL Trigger: TAAGTGCAGTTTAAAATCCTGACCCTGGGTGCGTCACTGTGTAATTTTATGTGTCTCACACCTCAGTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 72 bp | GTGATGGTGCCACACTGCGGGGCTGCAGTAAAAGACTaGCTTTCTTCTATGCTACTTAGAAATGTGAAATTT | + |
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Preference number: 3 (lower is better) Translates to: VMVPHCGAAVKD*LSSMLLRNVKF Trigger: AAATTTCACATTTCTAAGTAGCATAGAAGAAAGTCAGTCTTTTACTGCAGCCCCGCAGTGTGGCACCATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| 3UTR TCA 72 bp | TCAGAGATTCTGGTTTATAGTAAATACCACTGTGTATaGCACCGCTGTTGTGTCCAGTCTGGTGAAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: SEILVYSKYHCV*HRCCVQSGEEL Trigger: TAGCTCTTCACCAGACTGGACACAACAGCGGTGTCATACACAGTGGTATTTACTATAAACCAGAATCTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCAGTCCATCTTTTATGTaGTCTTCCCAAGCACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: EDSHLIHKVTQPYYDACVSPSFM*SSQALC Trigger: ACAGAGTGCTTGGGAAGACAACATAAAAGATGGACT...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS-3UTR GCA 90 bp | CAGACAAAGGGTCTCCCGAAGTGCTGCCTGTTTCCATGGCCAGGCTGCCAGTTCGGACGCCGGTCCACTTaGGCGGAGGAAGCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QTKGLPKCCLFPWPGCQFGRRST*AEEAPS Trigger: GCTGGGGGCTTCCTCCGCGCAAGTGGACCGGCGTCC...GAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGATGTTTCAGGATGAGCGTTCTGGCAGAGGCAAGGCCCACAATTCCAAAAGCAAGCTGGTGCTaGAGCTTCTGCGGCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: SPGCFRMSVLAEARPTIPKASWC*SFCGHP Trigger: GGGGTGGCCGCAGAAGCTCCAGCACCAGCTTGCTTT...TGGAATTGTGGGCCTTGCCTCTGCCAGAACGCTCATCCTGAAACATCCTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| CDS-3UTR CCA 90 bp | GTGTTGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGACAGACACAAAAGAGCTGGTGCTaGAGCTTCTGCGGCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: VLTRKTKINLRERSGGQTQKSWC*SFCGHP Trigger: GGGGTGGCCGCAGAAGCTCCAGCACCAGCTCTTTTG...TGTCTGTCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS-3UTR CCA 90 bp | CAGACAAAGGGTCTCCCGAAGTGCTGCCTGTTTCCATGGCCAGGCTGCCAGTTCCTATATCAAAAGAGCTaGTGCTGGAGCTTCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QTKGLPKCCLFPWPGCQFLYQKS*CWSFCG Trigger: GCCGCAGAAGCTCCAGCACCAGCTCTTTTGATATAG...GAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS-3UTR GCA 90 bp | CTAAATCTTTCTCCTTTTCCACCACACCAATCGAAAGTCCAGGATGTTTCAGGAGGACGCCGGTCCACTTaGGCGGAGGAAGCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LNLSPFPPHQSKVQDVSGGRRST*AEEAPS Trigger: GCTGGGGGCTTCCTCCGCGCAAGTGGACCGGCGTCC...TCCTGAAACATCCTGGACTTTCGATTGGTGTGGTGGAAAAGGAGAAAGATTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
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| CDS-3UTR TCA 90 bp | GTGCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGCGGAATGGGACAATTTaGGGGTCAGGATTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLLLESAAMEDHEGLVFLRNGTI*GSGLQP Trigger: TGGCTGCAATCCTGACCCTCAAATTGTCCCATTCCG...CAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS-3UTR TCA 90 bp | GTGTTGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGACAGACAAACCTGGGCGTAAAGTaGACTCCAAGGAAAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLTRKTKINLRERSGGQTNLGVK*TPRKGN Trigger: GTTTCCTTTCCTTGGAGTTCACTTTACGCCCAGGTT...TGTCTGTCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCTATCAAAAGAGCTGGTaGTGGAGCTTCTGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICPAQGLSNCLIYLPGICYQKSW*WSFCGH Trigger: GTGGCCGCAGAAGCTCCAGCACCAGCTCTTTTGATA...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGTATTTATATCCTCCTGCTaGATCAGCCTCAGGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGISCYGGPRGLGFSVFISSC*ISLRPS Trigger: CGAAGGCCTGAGGCTGATCCAGCAGGAGGATATAAA...TACAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGTAGAGCCACCTGCTTCTTaGAAATCCTGGGCAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGISCYGGPRGLGFSVEPPAS*KSWAND Trigger: GTCATTTGCCCAGGATTTCCAAGAAGCAGGTGGCTC...TACAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GTGTTGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGACAGACATTGTGTCCAGTCTGGTaGAGAGCTAAATCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTRKTKINLRERSGGQTLCPVW*RAKSFS Trigger: GGAGAAAGATTTAGCTCTTCACCAGACTGGACACAA...TGTCTGTCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGTAGCAGCCACTCAACTCTaGAATACGGTCAGAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGISCYGGPRGLGFSVAATQL*NTVRVK Trigger: CTTTACTCTGACCGTATTTCAGAGTTGAGTGGCTGC...TACAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| 3UTR CAA 72 bp | TCAACATGCACCCCCTCTCATACATCCATCACAGTGTaGACGAGGAAAACCAAGATCAACCTGAGAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: STCTPSHTSITV*TRKTKINLRER Trigger: GCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACACTGTGATGGATGTATGAGAGGGGGTGCATGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | CTTAGAACAGAGACGTGCTCTGCAGTGCTTCTTCTGGAATCAGCTGCTATGGAGCTCTCATACAAGGCCTaGAGTCTGGGAATTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTETCSAVLLLESAAMELSYKA*SLGISS Trigger: AGAAGAAATTCCCAGACTTCAGGCCTTGTATGAGAG...CTCCATAGCAGCTGATTCCAGAAGAAGCACTGCAGAGCACGTCTCTGTTCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | TACCACGTTAATGAAGTAAATAGGAAGGATATAAGGCACTTTCGCGGTTTACAATCTCTGTCCAGGGCCTaGGCCCGTACTCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YHVNEVNRKDIRHFRGLQSLSRA*ARTPAG Trigger: TCCTGCTGGAGTACGGGCCCAGGCCCTGGACAGAGA...TTGTAAACCGCGAAAGTGCCTTATATCCTTCCTATTTACTTCATTAACGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | ATATGCCCAGCCCAAGGGTTGAGTAACTGCCTCATCTATTTACCTGGGATATGCTTCCACCTCCAACGATaGCTATATCAAAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICPAQGLSNCLIYLPGICFHLQR*LYQKSW Trigger: CCAGCTCTTTTGATATAGTCATCGTTGGAGGTGGAA...GCATATCCCAGGTAAATAGATGAGGCAGTTACTCAACCCTTGGGCTGGGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGAAAGCCTAATAAACCTGAAGTTTCAGGACAGGTGCCGATACACTTCGAAATCCTGGGCAAATaGCAAAGCTACCTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWGKPNKPEVSGQVPIHFEILGK*QSYLLV Trigger: TACCAACAGGTAGCTTTGTCATTTGCCCAGGATTTC...GAAGTGTATCGGCACCTGTCCTGAAACTTCAGGTTTATTAGGCTTTCCCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GTGCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGGCTTCACTGTTTCACTaGGAAAACAGGCTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLESAAMEDHEGLVFLASLFH*ENRLYT Trigger: TGTATAAAGCCTGTTTTCTCAGTGAAACAGTGAAGC...CAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTTCTTCTGGAATCAGCTGCTATGGAGGACCACGAGGGCTTGGTTTTTCTGACAAGGCCTGAAGTCTaGGAATTTCTTCTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLESAAMEDHEGLVFLTRPEV*EFLLVQ Trigger: TTGAACAAGAAGAAATTCCCAGACTTCAGGCCTTGT...CAGAAAAACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACGAGGAAAACCAAGATCAACCTGAGAGAACGCTCGGGAGGACAGACAAGCCTTCAGAGATTCTaGTTTATAGTAAATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VLTRKTKINLRERSGGQTSLQRF*FIVNTT Trigger: AGTGGTATTTACTATAAACCAGAATCTCTGAAGGCT...TGTCTGTCCTCCCGAGCGTTCTCTCAGGTTGATCTTGGTTTTCCTCGTCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GGATTAGATAGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGTGCAGTACTCATAGATaGGGGCTGCGCCTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSLINVPVRAEVKRNKCSTHR*GLRLLH Trigger: GTGTAGAAGGCGCAGCCCTCATCTATGAGTACTGCA...CTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCTATCTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCCAAGATAGAGCCACCTaGTTCTTGGAAATCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDSHLIHKVTQPYYDACVQDRAT*FLEILG Trigger: GCCCAGGATTTCCAAGAAGCAGGTGGCTCTATCTTG...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGATATGCTGCCTCTCCAACTGAAGCCCACAATATGTATCCTTTTAAATTAGCTTCTTGGAAATCCTaGGCAAATGACAAAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LGYAASPTEAHNMYPFKLASWKS*ANDKAT Trigger: GGTAGCTTTGTCATTTGCCCAGGATTTCCAAGAAGC...TAATTTAAAAGGATACATATTGTGGGCTTCAGTTGGAGAGGCAGCATATCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCGTAATCTCCCCGGAATaGGACAATTTGAGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDSHLIHKVTQPYYDACVVISPE*DNLRVR Trigger: CCTGACCCTCAAATTGTCCCATTCCGGGGAGATTAC...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | TACCACGTTAATGAAGTAAATAGGAAGGATATAAGGCACTTTCGCGGTTTACAATGTAGGGAATTCCCTTaGGGTTGCAGTACTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YHVNEVNRKDIRHFRGLQCREFP*GCSTHR Trigger: TCTATGAGTACTGCAACCTCAAGGGAATTCCCTACA...TTGTAAACCGCGAAAGTGCCTTATATCCTTCCTATTTACTTCATTAACGTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | GGATTAGATAGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGCAGCTACTATTAGCTTaGCACATTGCCTGTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLDSLINVPVRAEVKRNKQLLLA*HIACRE Trigger: TTCCCTACAGGCAATGTGGCAAGCTAATAGTAGCTG...CTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCTATCTAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCTTTGAGGGTCAGGATTaGAGCCACTCAACTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EDSHLIHKVTQPYYDACVFEGQD*SHSTLK Trigger: TTTCAGAGTTGAGTGGCTGCAATCCTGACCCTCAAA...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCTATCATTCTAGAAATTaGCAGGGAGGAAGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDSHLIHKVTQPYYDACVYHSRN*QGGSGS Trigger: GCTGCCACTTCCTCCCTGGCAATTTCTAGAATGATA...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGATATGCTGCCTCTCCAACTGAAGCCCACAATATGTATCCTTTTAAATTAGTTCTTGACAGCGATTaGATAGTTCATGCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGYAASPTEAHNMYPFKLVLDSD*IVHAIF Trigger: AAAGATGGCATGAACTATCCAATCGCTGTCAAGAAC...TAATTTAAAAGGATACATATTGTGGGCTTCAGTTGGAGAGGCAGCATATCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | TATAAGGCACTTTCGCGGTTTACAAAAGTGAATGCCTCCAAGTTAGATATTAACCTTAAACCTTTGCTGTaGTTCCTCTGCTATCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKALSRFTKVNASKLDINLKPLL*FLCYHS Trigger: AGAATGATAGCAGAGGAAGCACAGCAAAGGTTTAAG...GTTAATATCTAACTTGGAGGCATTCACTTTTGTAAACCGCGAAAGTGCCTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR GCA 90 bp | GGATTAGATAGCTTAATAAATGTACCAGTAAGGGCTGAAGTGAAGAGAAACAAGCATAACTTAAACCTTTaGTGTGCTTCCTCTGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSLINVPVRAEVKRNKHNLNL*CASSAI Trigger: GATAGCAGAGGAAGCACAGCAAAGGTTTAAGTTATG...CTTGTTTCTCTTCACTTCAGCCCTTACTGGTACATTTATTAAGCTATCTAATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR TCA 90 bp | GAAGACTCTCATCTTATTCATAAAGTAACACAACCTTACTATGACGCTTGTGTCTCAGGAATGAACTTTTaGAGATGCTTCACTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EDSHLIHKVTQPYYDACVSGMNF*RCFTVS Trigger: TGAAACAGTGAAGCATCTTCAAAAGTTCATTCCTGA...GACACAAGCGTCATAGTAAGGTTGTGTTACTTTATGAATAAGATGAGAGTCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CAA 90 bp | CAGACAAAGGGTCTCCCGAAGTGCTGCCTGTTTCCATGGCCAGGCTGCCAGTTCCGGACGCCGGTCCACTaGCGCGGAGGAAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTKGLPKCCLFPWPGCQFRTPVH*RGGSPQ Trigger: CTGGGGGCTTCCTCCGCGCAAGTGGACCGGCGTCCG...GAACTGGCAGCCTGGCCATGGAAACAGGCAGCACTTCGGGAGACCCTTTGTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGATGTTTCAGGATGAGCGTTCTGGCAGAGGCAAGGCCCACAATTCCACGGACGCCGGTCCACTaGCGCGGAGGAAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGCFRMSVLAEARPTIPRTPVH*RGGSPQ Trigger: CTGGGGGCTTCCTCCGCGCAAGTGGACCGGCGTCCG...TGGAATTGTGGGCCTTGCCTCTGCCAGAACGCTCATCCTGAAACATCCTGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223387.2 |
||
| CDS TCA 90 bp | ATTGCCAGGGAGGAAGTGGCAGCAGGCGAAGGCGCATTTCTCACATaGAGGACGCGGTCTGCAATCTCGCCAGTCCCTCCGTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: IAREEVAAGEGAFLT*RTRSAISPVPPSNT Trigger: TGTGTTTGACGGAGGGACTGGCGAGATTGCAGACCGCGTCCTTCATGTGAGAAATGCGCCTTCGCCTGCTGCCACTTCCTCCCTGGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS GCA 90 bp | AGTGGCAGCAGGCGAAGGCGCATTTCTCACATGAAGGACGCGGTCTaGAATCTCGCCAGTCCCTCCGTCAAACACAAAATCCTCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSRRRRISHMKDAV*NLASPSVKHKILYQ Trigger: CTGGTAGAGGATTTTGTGTTTGACGGAGGGACTGGCGAGATTGCAGACCGCGTCCTTCATGTGAGAAATGCGCCTTCGCCTGCTGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS CCA 90 bp | TCAAACACAAAATCCTCTACCAGATTTCCATCTCTGTCCAGGGCCTaGGCCCGTACTCCAGCAGGACCTCGAAGGACATCGCTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNTKSSTRFPSLSRA*ARTPAGPRRTSLMV Trigger: CACCATCAGCGATGTCCTTCGAGGTCCTGCTGGAGTACGGGCCCAGGCCCTGGACAGAGATGGAAATCTGGTAGAGGATTTTGTGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS GCA 90 bp | AGACCAGGTAATCTCCCCGGAATGGGACAATTTGAGGGTCAGGATTaGAGCCACTCAACTCTGAAATACGGTCAGAGTAAAGACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPGNLPGMGQFEGQD*SHSTLKYGQSKDQH Trigger: GTGCTGGTCTTTACTCTGACCGTATTTCAGAGTTGAGTGGCTGCAATCCTGACCCTCAAATTGTCCCATTCCGGGGAGATTACCTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 90 bp | CTCAGGCCTTCGACTCCATTCTGCAGGCCTCTCTCATACAAGGCCTaGAGTCTGGGAATTTCTTCTTGTTCAACAGCTACTATTAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRPSTPFCRPLSYKA*SLGISSCSTATISL Trigger: CAAGCTAATAGTAGCTGTTGAACAAGAAGAAATTCCCAGACTTCAGGCCTTGTATGAGAGAGGCCTGCAGAATGGAGTCGAAGGCCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 90 bp | CCGGAATGGGACAATTTGAGGGTCAGGATTGCAGCCACTCAACTCTaGAATACGGTCAGAGTAAAGACCAGCACATGTGACAACATATCG | + |
|
Preference number: 5 (lower is better) Translates to: PEWDNLRVRIAATQL*NTVRVKTSTCDNIS Trigger: CGATATGTTGTCACATGTGCTGGTCTTTACTCTGACCGTATTTCAGAGTTGAGTGGCTGCAATCCTGACCCTCAAATTGTCCCATTCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGGGAAAGCCTAATAAACCTGAAGTTTCAGGACAGGTGCCGATACACTTCCGAATCTCCTTTCCCTaGCTGTTCTTGACAGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: AWGKPNKPEVSGQVPIHFRISFP*LFLTAI Trigger: AATCGCTGTCAAGAACAGCAAGGGAAAGGAGATTCG...GAAGTGTATCGGCACCTGTCCTGAAACTTCAGGTTTATTAGGCTTTCCCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 90 bp | ATCTCTCAAGATAGAGCCACCTGCTTCTTGGAAATCCTGGGCAAATaGCAAAGCTACCTGTTGGTAGTTCACAATGCCGGTGTATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ISQDRATCFLEILGK*QSYLLVVHNAGVWT Trigger: TGTCCATACACCGGCATTGTGAACTACCAACAGGTAGCTTTGTCATTTGCCCAGGATTTCCAAGAAGCAGGTGGCTCTATCTTGAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS CCA 90 bp | CTTCGACTCCATTCTGCAGGCCTCTCTCATACAAGGCCTGAAGTCTaGGAATTTCTTCTTGTTCAACAGCTACTATTAGCTTGCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: LRLHSAGLSHTRPEV*EFLLVQQLLLACHI Trigger: AATGTGGCAAGCTAATAGTAGCTGTTGAACAAGAAGAAATTCCCAGACTTCAGGCCTTGTATGAGAGAGGCCTGCAGAATGGAGTCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | GAGGAAGTGGCAGCAGGCGAAGGCGCATTTCTCACATaGAGGACGCGGTCTGCAATCTCGCCAGTCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: EEVAAGEGAFLT*RTRSAISPVPP Trigger: CGGAGGGACTGGCGAGATTGCAGACCGCGTCCTTCATGTGAGAAATGCGCCTTCGCCTGCTGCCACTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS CCA 72 bp | AAATCCTCTACCAGATTTCCATCTCTGTCCAGGGCCTaGGCCCGTACTCCAGCAGGACCTCGAAGGACATCG | + |
|
Preference number: 6 (lower is better) Translates to: KSSTRFPSLSRA*ARTPAGPRRTS Trigger: CGATGTCCTTCGAGGTCCTGCTGGAGTACGGGCCCAGGCCCTGGACAGAGATGGAAATCTGGTAGAGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | CCTAGCCAAATAGTGCCATCCAACCTGGGCGTAAAGTaGACTCCAAGGAAAGGAAACCGGCTGTCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PSQIVPSNLGVK*TPRKGNRLSGT Trigger: GGTCCCAGACAGCCGGTTTCCTTTCCTTGGAGTTCACTTTACGCCCAGGTTGGATGGCACTATTTGGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS GCA 72 bp | AGGCGAAGGCGCATTTCTCACATGAAGGACGCGGTCTaGAATCTCGCCAGTCCCTCCGTCAAACACAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRISHMKDAV*NLASPSVKHKI Trigger: GATTTTGTGTTTGACGGAGGGACTGGCGAGATTGCAGACCGCGTCCTTCATGTGAGAAATGCGCCTTCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | TGGCAGAGGCAAGGCCCACAATTCCACCTCCAACGATaGCTATATCAAAAGAGCTGGTGCTGGAGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WQRQGPQFHLQR*LYQKSWCWSFC Trigger: GCAGAAGCTCCAGCACCAGCTCTTTTGATATAGTCATCGTTGGAGGTGGAATTGTGGGCCTTGCCTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | TCGACTCCATTCTGCAGGCCTCTCTCATACAAGGCCTaGAGTCTGGGAATTTCTTCTTGTTCAACAGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: STPFCRPLSYKA*SLGISSCSTAT Trigger: AGTAGCTGTTGAACAAGAAGAAATTCCCAGACTTCAGGCCTTGTATGAGAGAGGCCTGCAGAATGGAGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | GACAATTTGAGGGTCAGGATTGCAGCCACTCAACTCTaGAATACGGTCAGAGTAAAGACCAGCACATGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DNLRVRIAATQL*NTVRVKTSTCD Trigger: GTCACATGTGCTGGTCTTTACTCTGACCGTATTTCAGAGTTGAGTGGCTGCAATCCTGACCCTCAAATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS GCA 72 bp | AATCTCCCCGGAATGGGACAATTTGAGGGTCAGGATTaGAGCCACTCAACTCTGAAATACGGTCAGAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: NLPGMGQFEGQD*SHSTLKYGQSK Trigger: TTTACTCTGACCGTATTTCAGAGTTGAGTGGCTGCAATCCTGACCCTCAAATTGTCCCATTCCGGGGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS TCA 72 bp | ACTCTGAAATACGGTCAGAGTAAAGACCAGCACATGTaGCAACATATCGACACCGAATCTCCTTTCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLKYGQSKDQHM*QHIDTESPFPC Trigger: GCAAGGGAAAGGAGATTCGGTGTCGATATGTTGTCACATGTGCTGGTCTTTACTCTGACCGTATTTCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
||
| CDS CCA 72 bp | ACCTCAAAATCTCTCAAGATAGAGCCACCTGCTTCTTaGAAATCCTGGGCAAATGACAAAGCTACCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TSKSLKIEPPAS*KSWANDKATCW Trigger: CCAACAGGTAGCTTTGTCATTTGCCCAGGATTTCCAAGAAGCAGGTGGCTCTATCTTGAGAGATTTTGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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| CDS CAA 72 bp | AAGGACATCGCTGATGGTGATTTCAGGAATGAACTTTaGAAGATGCTTCACTGTTTCACTGAGAAAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: KDIADGDFRNEL*KMLHCFTEKTG Trigger: GCCTGTTTTCTCAGTGAAACAGTGAAGCATCTTCAAAAGTTCATTCCTGAAATCACCATCAGCGATGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021370.10 |
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