Pregenerated sensors for KYNU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026866Ensembl transcript IDs: ENSMUST00000028223.9, ENSMUST00000050511.7, ENSMUST00000112826.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACTAAGTCTTTCCTGTTCCTCGTGTGCTGCAAGAGAAATCACGTaGAGCCCACCTCTGCTGGCAGGTCAGAGCTTAACTCCTGGCATG | + |
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Preference number: 1 (lower is better) Translates to: ILSLSCSSCAAREIT*SPPLLAGQSLTPGM Trigger: CATGCCAGGAGTTAAGCTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAGGAACAGGAAAGACTTAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR GCA 90 bp | GGATTCCACAGAACGAAGCATACTAAGTCTTTCCTGTTCCTCGTGTaGTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: GFHRTKHTKSFLFLV*CKRNHVQPTSAGRS Trigger: TGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAGGAACAGGAAAGACTTAGTATGCTTCGTTCTGTGGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 90 bp | ACCCCTCGCCTACAGAGCTCAAAGTCCCTAACACAAATTAACTCATaGTCCGGGGTTTGGAGGAGGGAATTAAGCCTAGAAACGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: TPRLQSSKSLTQINS*SGVWRRELSLETGS Trigger: GCTTCCCGTTTCTAGGCTTAATTCCCTCCTCCAAACCCCGGATCATGAGTTAATTTGTGTTAGGGACTTTGAGCTCTGTAGGCGAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 90 bp | GCTACATGTTCACTGGGAGTCAGCTCTGCACCCATCCAGGAAGGATaGGAGAATGTCTTAATGACAGTTTTAGAAATGCCACCCAATGTT | + |
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Preference number: 1 (lower is better) Translates to: ATCSLGVSSAPIQEG*ENVLMTVLEMPPNV Trigger: AACATTGGGTGGCATTTCTAAAACTGTCATTAAGACATTCTCTCATCCTTCCTGGATGGGTGCAGAGCTGACTCCCAGTGAACATGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR CCA 90 bp | GGTGTTCAGAGACTGAGGCAGAATACTCTGACTTCCAAACCAGCCTaGGTTACACAATCTCCCTTGAAAATCTATAAAAGAAAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GVQRLRQNTLTSKPA*VTQSPLKIYKRKEG Trigger: TCCTTCCTTTCTTTTATAGATTTTCAAGGGAGATTGTGTAACCCAGGCTGGTTTGGAAGTCAGAGTATTCTGCCTCAGTCTCTGAACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR CCA 90 bp | TGTATGCAACAGAGGCTGACATTATTTCCTTTAGGGGAAGTACATTaGATGTGTGGAAATATTGTTGACATTGCACACCAGCAAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: CMQQRLTLFPLGEVH*MCGNIVDIAHQQET Trigger: AGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACACATCCAATGTACTTCCCCTAAAGGAAATAATGTCAGCCTCTGTTGCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 90 bp | ATTATTTCCTTTAGGGGAAGTACATTGGATGTGTGGAAATATTGTTaGCATTGCACACCAGCAAGAAACTGTGATTTACGGATTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: IISFRGSTLDVWKYC*HCTPARNCDLRIPQ Trigger: CTGTGGAATCCGTAAATCACAGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACACATCCAATGTACTTCCCCTAAAGGAAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCAGAATACTCTGACTTCCAAACCAGCCTGGGTTACACAATCTCCCTTGACTGGGAGTCAGCTCTaGACCCATCCAGGAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LRQNTLTSKPAWVTQSPLTGSQL*THPGRM Trigger: CATCCTTCCTGGATGGGTGCAGAGCTGACTCCCAGT...CAAGGGAGATTGTGTAACCCAGGCTGGTTTGGAAGTCAGAGTATTCTGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR CAA 90 bp | AGACTCACTGGCCAGCCACACGAGCTGAAGGAGCAAGTTCCAGGTTaGGGGAGAAATCATGTATTGAAATATGAAGTGGAAAGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RLTGQPHELKEQVPG*GRNHVLKYEVERLE Trigger: CTCCAGCCTTTCCACTTCATATTTCAATACATGATTTCTCCCCAAACCTGGAACTTGCTCCTTCAGCTCGTGTGGCTGGCCAGTGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR-3UTR TCA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTAAGTGAGCATGAAATGTaGCAACTGATCAAGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLSEHEM*QLIKTV Trigger: GACTGTCTTGATCAGTTGTCACATTTCATGCTCACT...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR-3UTR TCA 90 bp | ACGGGAAGCCCTGGAGTCAGTCATTCTGACATCACATTGAGAGAAGCTTTAAGACAGCCAAAAATGATTTaGTGCCCTAGAATGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TGSPGVSHSDITLREALRQPKMI*CPRMSE Trigger: TTCTGACATTCTAGGGCATCAAATCATTTTTGGCTG...TCTTAAAGCTTCTCTCAATGTGATGTCAGAATGACTGACTCCAGGGCTTCCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | CGTGAAACTTCTAGCAAAGCACTAAGCTTTGAATCACAAACAAGCAGAGATCATATGCTACATGTTCACTaGGAGTCAGCTCTGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: RETSSKALSFESQTSRDHMLHVH*ESALHP Trigger: TGGGTGCAGAGCTGACTCCCAGTGAACATGTAGCAT...ATGATCTCTGCTTGTTTGTGATTCAAAGCTTAGTGCTTTGCTAGAAGTTTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAAATATTGTTGACATTGCACACCAGCAAGAAACTGTGATTTACGGATTCTTCCTGTTCCTCGTGTaGTGCAAGAGAAATCACGTG | + |
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Preference number: 2 (lower is better) Translates to: CGNIVDIAHQQETVIYGFFLFLV*CKRNHV Trigger: CACGTGATTTCTCTTGCAGCACACGAGGAACAGGAA...GAATCCGTAAATCACAGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | CATTGGATGTGTGGAAATATTGTTGACATTGCACACCAGCAAGAAACTGTGATTTCAGAGCTTAACTCCTaGCATGGCCTGAAGCATCTA | + |
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Preference number: 2 (lower is better) Translates to: HWMCGNIVDIAHQQETVISELNS*HGLKHL Trigger: TAGATGCTTCAGGCCATGCCAGGAGTTAAGCTCTGA...AATCACAGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACACATCCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAAGCAAGATTTGCTATTTATTCCCTTTGATCAGAAATGACCATGGGCTCAGACTCATCCCAACCTaGAACCCAGAGAGAAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: FKSKICYLFPLIRNDHGLRLIPT*NPERKR Trigger: ACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT...GAGCCCATGGTCATTTCTGATCAAAGGGAATAAATAGCAAATCTTGCTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGAGAAGGAAAACACACTaGAGAGCACAACGTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: PLDVSLFKQQSLLPILSMRRKTH*RAQRET Trigger: AGTTTCACGTTGTGCTCTGCAGTGTGTTTTCCTTCT...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGTTCTGTAATGCAGCTTaGCTGGTTAAGCCTGATTTA | + |
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Preference number: 2 (lower is better) Translates to: PLDVSLFKQQSLLPILSMFCNAA*LVKPDL Trigger: TAAATCAGGCTTAACCAGCCAAGCTGCATTACAGAA...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGAGAAACCATAAACTTTaGGGTTACCATTTGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PLDVSLFKQQSLLPILSMRNHKL*GYHLWL Trigger: CAACCACAAATGGTAACCCCAAAGTTTATGGTTTCT...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CCA 90 bp | CGTGAAACTTCTAGCAAAGCACTAAGCTTTGAATCACAAACAAGCAGAGATCATTTAGGGGAAGTACATTaGATGTGTGGAAATATTGTT | + |
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Preference number: 2 (lower is better) Translates to: RETSSKALSFESQTSRDHLGEVH*MCGNIV Trigger: AACAATATTTCCACACATCCAATGTACTTCCCCTAA...ATGATCTCTGCTTGTTTGTGATTCAAAGCTTAGTGCTTTGCTAGAAGTTTCACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 72 bp | ACCCGCATTCATTGTAGGGCAGAGACAGAGAAACGCTaGAGACTCACTGGCCAGCCACACGAGCTGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TRIHCRAETEKR*RLTGQPHELKE Trigger: CTCCTTCAGCTCGTGTGGCTGGCCAGTGAGTCTTCAGCGTTTCTCTGTCTCTGCCCTACAATGAATGCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR GCA 72 bp | CTTTCCTGTTCCTCGTGTGCTGCAAGAGAAATCACGTaGAGCCCACCTCTGCTGGCAGGTCAGAGCTTAACT | + |
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Preference number: 3 (lower is better) Translates to: LSCSSCAAREIT*SPPLLAGQSLT Trigger: AGTTAAGCTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAGGAACAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR GCA 72 bp | ACGAAGCATACTAAGTCTTTCCTGTTCCTCGTGTGCTaGAAGAGAAATCACGTGCAGCCCACCTCTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TKHTKSFLFLVC*KRNHVQPTSAG Trigger: GCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAGGAACAGGAAAGACTTAGTATGCTTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR GCA 72 bp | AGAACGAAGCATACTAAGTCTTTCCTGTTCCTCGTGTaGTGCAAGAGAAATCACGTGCAGCCCACCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RTKHTKSFLFLV*CKRNHVQPTSA Trigger: AGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAGGAACAGGAAAGACTTAGTATGCTTCGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CAA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTAGGAAGATGTCCAGTGTaGACCTCTGGCCTCACAAGA | + |
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Preference number: 3 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLGRCPV*TSGLTR Trigger: TCTTGTGAGGCCAGAGGTCAACACTGGACATCTTCC...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR-3UTR CAA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGCTCATGATCCGGGGTTaGGAGGAGGGAATTAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: PLDVSLFKQQSLLPILSMLMIRG*EEGIKP Trigger: AGGCTTAATTCCCTCCTCCAAACCCCGGATCATGAG...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CAA 90 bp | TCAGAAATGACCATGGGCTCTTGTAGCCATCCATCAGGGCTAACGCTGAGTGCTACTTGTCTTGATTGGTaGACTAGAAGGATATGCAAT | + |
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Preference number: 3 (lower is better) Translates to: SEMTMGSCSHPSGLTLSATCLDW*TRRICN Trigger: ATTGCATATCCTTCTAGTCAACCAATCAAGACAAGT...AGCACTCAGCGTTAGCCCTGATGGATGGCTACAAGAGCCCATGGTCATTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| 3UTR TCA 72 bp | TGGGGGATTGCTTGGTCGATGAAGTGGTTGCTGAACTaGTATAAGGACTGTGTTCAGATCACAGTAGACATG | + |
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Preference number: 3 (lower is better) Translates to: WGIAWSMKWLLN*YKDCVQITVDM Trigger: CATGTCTACTGTGATCTGAACACAGTCCTTATATCAGTTCAGCAACCACTTCATCGACCAAGCAATCCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR CCA 72 bp | ACAGAGAAGGAAAAGCCAGTCTTCTGTAATGCAGCTTaGCTGGTTAAGCCTGATTTAAGCCCATCCATATGC | + |
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Preference number: 3 (lower is better) Translates to: TEKEKPVFCNAA*LVKPDLSPSIC Trigger: GCATATGGATGGGCTTAAATCAGGCTTAACCAGCCAAGCTGCATTACAGAAGACTGGCTTTTCCTTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 72 bp | GTATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTaGTCTGATGTATCTTCTAGTTTCTGTAATCATGGC | + |
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Preference number: 3 (lower is better) Translates to: VSTQQLCNSSLR*SDVSSSFCNHG Trigger: GCCATGATTACAGAAACTAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR TCA 72 bp | CTACAGAGCTCAAAGTCCCTAACACAAATTAACTCATaGTCCGGGGTTTGGAGGAGGGAATTAAGCCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: LQSSKSLTQINS*SGVWRRELSLE Trigger: TTCTAGGCTTAATTCCCTCCTCCAAACCCCGGATCATGAGTTAATTTGTGTTAGGGACTTTGAGCTCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR CCA 72 bp | AAGGATAAGTTTAGTAACCTAAGACTCATCCCAACCTaGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: KDKFSNLRLIPT*NPERKRGEMQD Trigger: GTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCTTAGGTTACTAAACTTATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| 3UTR-3UTR CAA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGGGATGTGTGGAAATATaGTTGACATTGCACACCAGC | + |
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Preference number: 3 (lower is better) Translates to: PLDVSLFKQQSLLPILSMGCVEI*LTLHTS Trigger: GCTGGTGTGCAATGTCAACAATATTTCCACACATCC...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CAA 90 bp | ACGGGAAGCCCTGGAGTCAGTCATTCTGACATCACATTGAGAGAAGCTTTAAGATTTAGGGGAAGTACATaGGATGTGTGGAAATATTGT | + |
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Preference number: 3 (lower is better) Translates to: TGSPGVSHSDITLREALRFRGST*DVWKYC Trigger: ACAATATTTCCACACATCCAATGTACTTCCCCTAAA...TCTTAAAGCTTCTCTCAATGTGATGTCAGAATGACTGACTCCAGGGCTTCCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR CCA 72 bp | CAGAGGCTGACATTATTTCCTTTAGGGGAAGTACATTaGATGTGTGGAAATATTGTTGACATTGCACACCAG | + |
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Preference number: 3 (lower is better) Translates to: QRLTLFPLGEVH*MCGNIVDIAHQ Trigger: CTGGTGTGCAATGTCAACAATATTTCCACACATCCAATGTACTTCCCCTAAAGGAAATAATGTCAGCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR-3UTR CAA 90 bp | CCACTAGATGTCAGCCTTTTCAAGCAACAAAGCTTACTGCCAATTTTGTCAATGTGTGTGGAAATATTGTaGACATTGCACACCAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: PLDVSLFKQQSLLPILSMCVEIL*TLHTSK Trigger: CTTGCTGGTGTGCAATGTCAACAATATTTCCACACA...CATTGACAAAATTGGCAGTAAGCTTTGTTGCTTGAAAAGGCTGACATCTAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 72 bp | TTTAGGGGAAGTACATTGGATGTGTGGAAATATTGTTaGCATTGCACACCAGCAAGAAACTGTGATTTACGG | + |
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Preference number: 3 (lower is better) Translates to: FRGSTLDVWKYC*HCTPARNCDLR Trigger: CCGTAAATCACAGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACACATCCAATGTACTTCCCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| 3UTR TCA 72 bp | ATGTATCTTCTAGTTTCTGTAATCATGGCATGCACATaGGGTACAGACATAAATGCAGTCAAAATACCCATA | + |
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Preference number: 3 (lower is better) Translates to: MYLLVSVIMACT*GTDINAVKIPI Trigger: TATGGGTATTTTGACTGCATTTATGTCTGTACCTCATGTGCATGCCATGATTACAGAAACTAGAAGATACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| 3UTR TCA 72 bp | ACTGAGCATCACTACTGTTTATGGAACCAGTCTAGTTaGATGTCGTATTTTGACATTTTCAATCTTCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: TEHHYCLWNQSS*MSYFDIFNLPL Trigger: TAGAGGAAGATTGAAAATGTCAAAATACGACATTCAACTAGACTGGTTCCATAAACAGTAGTGATGCTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CCA 90 bp | CTCGTGTGCTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCAGAGCTCTTCCCCCTCTCGTaGCTTTACCATCCGCATACT | + |
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Preference number: 4 (lower is better) Translates to: LVCCKRNHVQPTSAGRSELFPLS*LYHPHT Trigger: AGTATGCGGATGGTAAAGCCACGAGAGGGGGAAGAG...CTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CCA 90 bp | CTCGTGTGCTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCAGAGAACCCTCTCATCTGTTaGGTCACAATTGAGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVCCKRNHVQPTSAGRSENPLIC*VTIEFS Trigger: GCTGAACTCAATTGTGACCCAACAGATGAGAGGGTT...CTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR TCA 90 bp | TCAGAAATGACCATGGGCTCTTGTAGCCATCCATCAGGGCTAACGCTGAGTGCTTGGGAATGGAAAAGGTaGGTGTTAACTGGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SEMTMGSCSHPSGLTLSAWEWKR*VLTGSH Trigger: GTGGCTGCCAGTTAACACTCACCTTTTCCATTCCCA...AGCACTCAGCGTTAGCCCTGATGGATGGCTACAAGAGCCCATGGTCATTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| CDS-3UTR GCA 90 bp | TCAGAAATGACCATGGGCTCTTGTAGCCATCCATCAGGGCTAACGCTGAGTGCTACCTCTAAACTGGCGTaGAAGGAGCAGACCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: SEMTMGSCSHPSGLTLSATSKLA*KEQTNK Trigger: TTTGTTGGTCTGCTCCTTGCACGCCAGTTTAGAGGT...AGCACTCAGCGTTAGCCCTGATGGATGGCTACAAGAGCCCATGGTCATTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| 3UTR CAA 72 bp | GCTTTGAATCACAAACAAGCAGAGATCATGAGGCTCTaGTGCAAGTCTACAACACCCCTCGCCTACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALNHKQAEIMRL*CKSTTPLAYRA Trigger: AGCTCTGTAGGCGAGGGGTGTTGTAGACTTGCACAAGAGCCTCATGATCTCTGCTTGTTTGTGATTCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGCTCTTCCCCCTCTCGTaGCTTTACCATCCGCATACT | + |
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Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMLFPLS*LYHPHT Trigger: AGTATGCGGATGGTAAAGCCACGAGAGGGGGAAGAG...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR TCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGTGGGAATGGAAAAGGTaGGTGTTAACTGGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMWEWKR*VLTGSH Trigger: GTGGCTGCCAGTTAACACTCACCTTTTCCATTCCCA...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAAGGAAAACACACTGCAGAGCACAACGTGAAACTTCTAGCAAAGCACTAGGTTGCCTTTCAGCTTaGTATCACACTGCAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: QRRKTHCRAQRETSSKALGCLSA*YHTAGR Trigger: ACGACCTGCAGTGTGATATCAAGCTGAAAGGCAACC...TAGTGCTTTGCTAGAAGTTTCACGTTGTGCTCTGCAGTGTGTTTTCCTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CCA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATAAACCCTCTCATCTGTTaGGTCACAATTGAGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RLIPTWNPERKRGEMQDINPLIC*VTIEFS Trigger: GCTGAACTCAATTGTGACCCAACAGATGAGAGGGTT...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| CDS-3UTR CCA 90 bp | AGACTGAGGCAGAATACTCTGACTTCCAAACCAGCCTGGGTTACACAATCTCCCGCAGGTCCCGCATTTTaGGAATATAAAAACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQNTLTSKPAWVTQSPAGPAF*EYKNSS Trigger: GGAACTGTTTTTATATTCCCAAAATGCGGGACCTGC...GGGAGATTGTGTAACCCAGGCTGGTTTGGAAGTCAGAGTATTCTGCCTCAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR CCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGGAAAGACCTCTAAACTaGCGTGCAAGGAGCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMERPLN*RARSRP Trigger: TGGTCTGCTCCTTGCACGCCAGTTTAGAGGTCTTTC...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CCA 90 bp | GATAAGTTTAGTAACCTAAGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGAAAGACCTCTAAACTaGCGTGCAAGGAGCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DKFSNLRLIPTWNPERKRERPLN*RARSRP Trigger: TGGTCTGCTCCTTGCACGCCAGTTTAGAGGTCTTTC...ACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCTTAGGTTACTAAACTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATAAACCTGTCAGCAGAATaGATTTTCTTCTCAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWNPERKRGEMQDINLSAE*IFFSAQ Trigger: CTGCGCTGAGAAGAAAATCCATTCTGCTGACAGGTT...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| 3UTR CAA 72 bp | GGCCAGCCACACGAGCTGAAGGAGCAAGTTCCAGGTTaGGGGAGAAATCATGTATTGAAATATGAAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQPHELKEQVPG*GRNHVLKYEVE Trigger: TTCCACTTCATATTTCAATACATGATTTCTCCCCAAACCTGGAACTTGCTCCTTCAGCTCGTGTGGCTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR GCA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTAACCTCTAAACTGGCGTaGAAGGAGCAGACCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLTSKLA*KEQTNK Trigger: TTTGTTGGTCTGCTCCTTGCACGCCAGTTTAGAGGT...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CCA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATAAAATTCGGAATCCATTaGCCCCGGGGATTAATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWNPERKRGEMQDIKFGIH*PRGLIV Trigger: TACAATTAATCCCCGGGGCCAATGGATTCCGAATTT...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTAGTCATGTAAAGTGTGACTTCATAATTCACAGGACACCACGTTCCCCAAACCTGTCAGCAGAATaGATTTTCTTCTCAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSHVKCDFIIHRTPRSPNLSAE*IFFSAQ Trigger: CTGCGCTGAGAAGAAAATCCATTCTGCTGACAGGTT...TGGGGAACGTGGTGTCCTGTGAATTATGAAGTCACACTTTACATGACTACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| 3UTR CAA 72 bp | GGAAAGGCTGGAGAGATGTGTCAAAGAATAAGAGCGTaGGCTATTCTTCCAAACGACCTGGGTTCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKAGEMCQRIRA*AILPNDLGSIP Trigger: AGGAATTGAACCCAGGTCGTTTGGAAGAATAGCCAACGCTCTTATTCTTTGACACATCTCTCCAGCCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR TCA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATATGCTGTGGTAATGTTTaGGCATGTATTCCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWNPERKRGEMQDICCGNV*ACIPDN Trigger: GTTATCTGGAATACATGCTCAAACATTACCACAGCA...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGAGGCAGAATACTCTGACTTCCAAACCAGCCTGGGTTACACAATCTCCCAACAAAACAGCCCTTTaGATGTCCAGCTTTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRQNTLTSKPAWVTQSPNKTAL*MSSFCY Trigger: ATAACAAAAGCTGGACATGCAAAGGGCTGTTTTGTT...GGGAGATTGTGTAACCCAGGCTGGTTTGGAAGTCAGAGTATTCTGCCTCAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR CCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGAACCCTCTCATCTGTTaGGTCACAATTGAGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMNPLIC*VTIEFS Trigger: GCTGAACTCAATTGTGACCCAACAGATGAGAGGGTT...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGTAGTCATGTAAAGTGTGACTTCATAATTCACAGGACACCACGTTCCCCATTATGGCAGGAATGTTaGACAGCTGTCCAGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSHVKCDFIIHRTPRSPLWQEC*TAVQYK Trigger: TTTATACTGGACAGCTGTTCAACATTCCTGCCATAA...TGGGGAACGTGGTGTCCTGTGAATTATGAAGTCACACTTTACATGACTACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR GCA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATAAACAAAACAGCCCTTTaGATGTCCAGCTTTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWNPERKRGEMQDINKTAL*MSSFCY Trigger: ATAACAAAAGCTGGACATGCAAAGGGCTGTTTTGTT...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGGCAGGTCCCGCATTTTaGGAATATAAAAACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMAGPAF*EYKNSS Trigger: GGAACTGTTTTTATATTCCCAAAATGCGGGACCTGC...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGTAGTCATGTAAAGTGTGACTTCATAATTCACAGGACACCACGTTCCCCACAGAAGGGAAGGCTTTaGCTTCTAGAAGAATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSHVKCDFIIHRTPRSPQKGRL*LLEEFC Trigger: ACAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTG...TGGGGAACGTGGTGTCCTGTGAATTATGAAGTCACACTTTACATGACTACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAAAGCAAGATTTGCTATTTATTCCCTTTGATCAGAAATGACCATGGGCTCCTCTTCCCCCTCTCGTaGCTTTACCATCCGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: FKSKICYLFPLIRNDHGLLFPLS*LYHPHT Trigger: AGTATGCGGATGGTAAAGCCACGAGAGGGGGAAGAG...GAGCCCATGGTCATTTCTGATCAAAGGGAATAAATAGCAAATCTTGCTTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGAAATTCGGAATCCATTaGCCCCGGGGATTAATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMKFGIH*PRGLIV Trigger: TACAATTAATCCCCGGGGCCAATGGATTCCGAATTT...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAGGAAAACACACTGCAGAGCACAACGTGAAACTTCTAGCAAAGCACTATTATGGCAGGAATGTTaGACAGCTGTCCAGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRRKTHCRAQRETSSKALLWQEC*TAVQYK Trigger: TTTATACTGGACAGCTGTTCAACATTCCTGCCATAA...TAGTGCTTTGCTAGAAGTTTCACGTTGTGCTCTGCAGTGTGTTTTCCTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR TCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGTGCTGTGGTAATGTTTaGGCATGTATTCCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMCCGNV*ACIPDN Trigger: GTTATCTGGAATACATGCTCAAACATTACCACAGCA...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGGAAAACACACTGCAGAGCACAACGTGAAACTTCTAGCAAAGCACTACAGAAGGGAAGGCTTTaGCTTCTAGAAGAATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRKTHCRAQRETSSKALQKGRL*LLEEFC Trigger: ACAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTG...TAGTGCTTTGCTAGAAGTTTCACGTTGTGCTCTGCAGTGTGTTTTCCTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR TCA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTAGTGAAGTTGAATCTGTaGCTCAATAGCATAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLVKLNL*LNSIMI Trigger: GATCATTATGCTATTGAGTCACAGATTCAACTTCAC...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR TCA 90 bp | GATAAGTTTAGTAACCTAAGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGTGAAGTTGAATCTGTaGCTCAATAGCATAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: DKFSNLRLIPTWNPERKRVKLNL*LNSIMI Trigger: GATCATTATGCTATTGAGTCACAGATTCAACTTCAC...ACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCTTAGGTTACTAAACTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| CDS-3UTR GCA 90 bp | AGGACACCACGTTCCCCAGAAACACAGATATTAAAGCATGCACCAGGTTTTATGAACAAAACAGCCCTTTaGATGTCCAGCTTTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPRSPETQILKHAPGFMNKTAL*MSSFCY Trigger: ATAACAAAAGCTGGACATGCAAAGGGCTGTTTTGTT...CATAAAACCTGGTGCATGCTTTAATATCTGTGTTTCTGGGGAACGTGGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR TCA 90 bp | CGTGAAACTTCTAGCAAAGCACTAAGCTTTGAATCACAAACAAGCAGAGATCATGTGAAGTTGAATCTGTaGCTCAATAGCATAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: RETSSKALSFESQTSRDHVKLNL*LNSIMI Trigger: GATCATTATGCTATTGAGTCACAGATTCAACTTCAC...ATGATCTCTGCTTGTTTGTGATTCAAAGCTTAGTGCTTTGCTAGAAGTTTCACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAAGATTTGCTATTTATTCCCTTTGATCAGAAATGACCATGGGCTCTTGCAGAAGGGAAGGCTTTaGCTTCTAGAAGAATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKICYLFPLIRNDHGLLQKGRL*LLEEFC Trigger: ACAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTG...CAAGAGCCCATGGTCATTTCTGATCAAAGGGAATAAATAGCAAATCTTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
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| CDS-3UTR CAA 90 bp | CTCGTGTGCTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCAGAGAGGTTGCCTTTCAGCTaGATATCACACTGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVCCKRNHVQPTSAGRSERLPFS*ISHCRS Trigger: CGACCTGCAGTGTGATATCAAGCTGAAAGGCAACCT...CTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CAA 90 bp | CTCGTGTGCTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCAGAGCTAAAGATAGATCAATaGAAGGCAGGTCCCGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LVCCKRNHVQPTSAGRSELKIDQ*KAGPAF Trigger: AAATGCGGGACCTGCCTTCAATTGATCTATCTTTAG...CTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
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| CDS-3UTR CAA 90 bp | CTCGTGTGCTGCAAGAGAAATCACGTGCAGCCCACCTCTGCTGGCAGGTCAGAGTCAGAAGGGAAGGCTTaGGCTTCTAGAAGAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVCCKRNHVQPTSAGRSESEGKA*ASRRIL Trigger: CAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTGA...CTCTGACCTGCCAGCAGAGGTGGGCTGCACGTGATTTCTCTTGCAGCACACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR CAA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATATCTGTTGGGTCACAATaGAGTTCAGCCGCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLIPTWNPERKRGEMQDISVGSQ*SSAAMR Trigger: GCGCATCGCGGCTGAACTCAATTGTGACCCAACAGA...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CAA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTATCTGTTGGGTCACAATaGAGTTCAGCCGCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLSVGSQ*SSAAMR Trigger: GCGCATCGCGGCTGAACTCAATTGTGACCCAACAGA...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR CAA 90 bp | TCAGAAATGACCATGGGCTCTTGTAGCCATCCATCAGGGCTAACGCTGAGTGCTTCAGAAGGGAAGGCTTaGGCTTCTAGAAGAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEMTMGSCSHPSGLTLSASEGKA*ASRRIL Trigger: CAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTGA...AGCACTCAGCGTTAGCCCTGATGGATGGCTACAAGAGCCCATGGTCATTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CAA 90 bp | AGACTCATCCCAACCTGGAACCCAGAGAGAAAGCGTGGTGAAATGCAAGACATAGAAATTCGGAATCCATaGGCCCCGGGGATTAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLIPTWNPERKRGEMQDIEIRNP*APGINC Trigger: ACAATTAATCCCCGGGGCCAATGGATTCCGAATTTC...TATGTCTTGCATTTCACCACGCTTTCTCTCTGGGTTCCAGGTTGGGATGAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112826.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTAGTCATGTAAAGTGTGACTTCATAATTCACAGGACACCACGTTCCCCACCATCTGGTTCTCGCTaGTCACAAACGACTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCSHVKCDFIIHRTPRSPPSGSR*SQTTPL Trigger: AAGAGGAGTCGTTTGTGACAAGCGAGAACCAGATGG...TGGGGAACGTGGTGTCCTGTGAATTATGAAGTCACACTTTACATGACTACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
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| CDS-3UTR CAA 90 bp | CATTGGATGTGTGGAAATATTGTTGACATTGCACACCAGCAAGAAACTGTGATTTCTGTTGGGTCACAATaGAGTTCAGCCGCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HWMCGNIVDIAHQQETVISVGSQ*SSAAMR Trigger: GCGCATCGCGGCTGAACTCAATTGTGACCCAACAGA...AATCACAGTTTCTTGCTGGTGTGCAATGTCAACAATATTTCCACACATCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS-3UTR CAA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTAGAAATTCGGAATCCATaGGCCCCGGGGATTAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLEIRNP*APGINC Trigger: ACAATTAATCCCCGGGGCCAATGGATTCCGAATTTC...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CAA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTACTAAAGATAGATCAATaGAAGGCAGGTCCCGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLLKIDQ*KAGPAF Trigger: AAATGCGGGACCTGCCTTCAATTGATCTATCTTTAG...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS-3UTR CAA 90 bp | TATCCACACAGCAGCTCTGTAACTCCAGTCTCAGGTGATCTGATGTATCTTCTATCAGAAGGGAAGGCTTaGGCTTCTAGAAGAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YPHSSSVTPVSGDLMYLLSEGKA*ASRRIL Trigger: CAAAATTCTTCTAGAAGCCAAAGCCTTCCCTTCTGA...TAGAAGATACATCAGATCACCTGAGACTGGAGTTACAGAGCTGCTGTGTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS GCA 72 bp | TGGGTCACAATTGAGTTCAGCCGCGATGCGCCGCACTaGATCAACTGGAAGCTCAAGAGGCGAAGGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WVTIEFSRDAPH*INWKLKRRRLH Trigger: ATGGAGCCTTCGCCTCTTGAGCTTCCAGTTGATGCAGTGCGGCGCATCGCGGCTGAACTCAATTGTGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028223.9 ENSMUST00000050511.7 ENSMUST00000112826.8 |
||
| CDS CCA 72 bp | TTCCTCATCCAAGCGGAGAGCAACCCTCTCATCTGTTaGGTCACAATTGAGTTCAGCCGCGATGCGCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLIQAESNPLIC*VTIEFSRDAPH Trigger: GTGCGGCGCATCGCGGCTGAACTCAATTGTGACCCAACAGATGAGAGGGTTGCTCTCCGCTTGGATGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028223.9 ENSMUST00000050511.7 ENSMUST00000112826.8 |
||
| CDS CAA 90 bp | TCCTCATCCAAGCGGAGAGCAACCCTCTCATCTGTTGGGTCACAATaGAGTTCAGCCGCGATGCGCCGCACTGCATCAACTGGAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSKRRATLSSVGSQ*SSAAMRRTASTGSS Trigger: TGAGCTTCCAGTTGATGCAGTGCGGCGCATCGCGGCTGAACTCAATTGTGACCCAACAGATGAGAGGGTTGCTCTCCGCTTGGATGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028223.9 ENSMUST00000050511.7 ENSMUST00000112826.8 |
||
| CDS CAA 72 bp | AAGCGGAGAGCAACCCTCTCATCTGTTGGGTCACAATaGAGTTCAGCCGCGATGCGCCGCACTGCATCAACT | + |
|
Preference number: 6 (lower is better) Translates to: KRRATLSSVGSQ*SSAAMRRTAST Trigger: AGTTGATGCAGTGCGGCGCATCGCGGCTGAACTCAATTGTGACCCAACAGATGAGAGGGTTGCTCTCCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028223.9 ENSMUST00000050511.7 ENSMUST00000112826.8 |
||
| CDS TCA 72 bp | TGGCCGAACCATCCCACTAACGCAGGCTTGACAGTATaGGCATGTTTCTCGTGGACAAAGGCACCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WPNHPTNAGLTV*ACFSWTKAPAR Trigger: TCTGGCTGGTGCCTTTGTCCACGAGAAACATGCTCATACTGTCAAGCCTGCGTTAGTGGGATGGTTCGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028223.9 ENSMUST00000112826.8 |
||
| CDS TCA 72 bp | TCACACTGCAGGTCGTCCATCGCAGGCTTGACAGTATaGGCATGTTTCTCGTGGACAAAGGCACCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHCRSSIAGLTV*ACFSWTKAPAR Trigger: TCTGGCTGGTGCCTTTGTCCACGAGAAACATGCTCATACTGTCAAGCCTGCGATGGACGACCTGCAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS GCA 72 bp | GGAAAGAATTATAGAGAGGAACAGGGGCCACGCGGATaGCATCTGGTTCTCGCTTGTCACAAACGACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKNYREEQGPRG*HLVLACHKRLL Trigger: GAGGAGTCGTTTGTGACAAGCGAGAACCAGATGGCATCCGCGTGGCCCCTGTTCCTCTCTATAATTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028223.9 |
||
| CDS CAA 72 bp | CTCCTCTGTCCATATGCAAACAGGTTGCCTTTCAGCTaGATATCACACTGCAGGTCGTCCATCGCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLCPYANRLPFS*ISHCRSSIAGL Trigger: CAAGCCTGCGATGGACGACCTGCAGTGTGATATCAAGCTGAAAGGCAACCTGTTTGCATATGGACAGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050511.7 |
||
| CDS TCA 72 bp | ATGGATTTTCTTCTCAGCGCAGTCATAGTTGCTTGCTaGAAGACCTCTAAACTGGCGTGCAAGGAGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: MDFLLSAVIVAC*KTSKLACKEQT Trigger: GGTCTGCTCCTTGCACGCCAGTTTAGAGGTCTTTCAGCAAGCAACTATGACTGCGCTGAGAAGAAAATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028223.9 ENSMUST00000112826.8 |
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| CDS CCA 72 bp | AGTTTGTTATCCATGTTAAACCTTGTACTGAGGTCATaGCCGAACCATCCCACTAACGCAGGCTTGACAGTA | + |
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Preference number: 6 (lower is better) Translates to: SLLSMLNLVLRS*PNHPTNAGLTV Trigger: TACTGTCAAGCCTGCGTTAGTGGGATGGTTCGGCCATGACCTCAGTACAAGGTTTAACATGGATAACAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028223.9 ENSMUST00000112826.8 |
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| CDS TCA 72 bp | ACTTTTCTCAACATCAAGTCCGTGAAGTTGAATCTGTaGCTCAATAGCATAATGATCAGAAGGGAAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: TFLNIKSVKLNL*LNSIMIRREGF Trigger: AAAGCCTTCCCTTCTGATCATTATGCTATTGAGTCACAGATTCAACTTCACGGACTTGATGTTGAGAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028223.9 ENSMUST00000050511.7 ENSMUST00000112826.8 |
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