Pregenerated sensors for KYAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040213Ensembl transcript IDs: ENSMUST00000044392.11, ENSMUST00000106218.8, ENSMUST00000129775.8, ENSMUST00000199519.5
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCTAAGCTGGTCCTATTGCTGAGTCCCCTGTCAGCCTCCTCCTaGGGCAGATTGAAGACCGTGGACACCAGCCCTTCCCCTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: EPKLVLLLSPLSASS*GRLKTVDTSPSPDL Trigger: CAGGTCAGGGGAAGGGCTGGTGTCCACGGTCTTCAATCTGCCTCAGGAGGAGGCTGACAGGGGACTCAGCAATAGGACCAGCTTAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CCA 90 bp | GCAGAGGTAACAAGGTCAGGGGGTGGAAAACACAGGCTGCCCACGTaGACCGTGAGGCCACCCAAGTCACAGCAGCCCTTGGAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: AEVTRSGGGKHRLPT*TVRPPKSQQPLEEK Trigger: TTTCTCTTCCAAGGGCTGCTGTGACTTGGGTGGCCTCACGGTCCACGTGGGCAGCCTGTGTTTTCCACCCCCTGACCTTGTTACCTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR TCA 90 bp | TTTTGTGTCTCCCACAAGCAGGTGGACCCTGCTGTGACTTGGTTGTaGTGCTGGCAGTGGGCTGTGACCCGGGATGAGAAGGGGGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: FCVSHKQVDPAVTWL*CWQWAVTRDEKGVD Trigger: ATCCACCCCCTTCTCATCCCGGGTCACAGCCCACTGCCAGCATCACAACCAAGTCACAGCAGGGTCCACCTGCTTGTGGGAGACACAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR GCA 90 bp | GTGGATGACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTaGAGGCCATGCTGCACTTGGTGCAGTAACGGCGATTTCCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VDDLELLPPPPKCWV*RPCCTWCSNGDFRF Trigger: GAAACGGAAATCGCCGTTACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGTCATCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| 3UTR TCA 90 bp | GTCAGGACTGGAACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTaGTGCAGAGGCCAAGAAGAGGTGCTGCTTTCTGGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VRTGTQAGQESEGRS*CRGQEEVLLSGLLS Trigger: GCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTTCCAGTCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR GCA 90 bp | TATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCCCAAGTaGTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTAACGGCGAT | + |
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Preference number: 1 (lower is better) Translates to: YVTVDDLELLPPPPK*WVCRPCCTWCSNGD Trigger: ATCGCCGTTACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| 3UTR GCA 90 bp | TTGCTGCTCGACCCTCTGGTTCTGGTTTCCCGCTGTCTATCCTCATaGAGCCTTTCCCATAAGCTGACACCCAGCACACACCCCTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LLLDPLVLVSRCLSS*SLSHKLTPSTHPFG Trigger: ACCAAAGGGGTGTGTGCTGGGTGTCAGCTTATGGGAAAGGCTGCATGAGGATAGACAGCGGGAAACCAGAACCAGAGGGTCGAGCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCAAGAAGAGGTGCTGCTTTCTGGCTTaGTCAGCTTGCTTTCTCATAGAACTCAGGACTACCAGCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AGADAEAKKRCCFLA*SACFLIELRTTSPG Trigger: CCCTGGGCTGGTAGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGCCTCTGCATCAGCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CCA 90 bp | TGCCCACGAGGTGGCAGCACTGAGCAGCAAGTCCTTGCAGGAAGATaGAACCAGTCAAGACTTCTGGCTGTTCCAGGCCCTGAAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: CPRGGSTEQQVLAGR*NQSRLLAVPGPEDF Trigger: GAAATCTTCAGGGCCTGGAACAGCCAGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAGTGCTGCCACCTCGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR GCA 90 bp | CTGATGCACAGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTTaGAGCTCCTGTCTGGTATACACCTTGCCGAGGGGGTTGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LMHRVSCLTQRSAMT*SSCLVYTLPRGLCG Trigger: TCCACACAACCCCCTCGGCAAGGTGTATACCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTGTGCATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR TCA 90 bp | GGTGAGCAGGGCCAATGCTCCAGCCGAGCTTCCAGCCAGTCACACTaGATGTCTTGCCAGCACTTCCTATTGTTATTGTTCTCTCCCACA | + |
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Preference number: 1 (lower is better) Translates to: GEQGQCSSRASSQSH*MSCQHFLLLLFSPT Trigger: TGTGGGAGAGAACAATAACAATAGGAAGTGCTGGCAAGACATTCAGTGTGACTGGCTGGAAGCTCGGCTGGAGCATTGGCCCTGCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR GCA 90 bp | GGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGAGGTaGTGCTTTCTGGCTTGCTCAGCTTGCTTTCTCATAGAACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GKNPKAGADAEAKKR*CFLACSACFLIELR Trigger: CCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CCA 90 bp | CTGAGCAGCAAGTCCTTGCAGGAAGATGGAACCAGTCAAGACTTCTaGCTGTTCCAGGCCCTGAAGATTTCTTCGGCAGCATCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSSKSLQEDGTSQDF*LFQALKISSAASSV Trigger: CACACTGGATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCCAGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR TCA 90 bp | TGCTGTGACTTGGTTGTGATGCTGGCAGTGGGCTGTGACCCGGGATaGGAAGGGGGTGGATTTTCTTTCTTATCACAGAGCATGCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: CCDLVVMLAVGCDPG*EGGGFSFLSQSMLA Trigger: TGCTAGCATGCTCTGTGATAAGAAAGAAAATCCACCCCCTTCTCATCCCGGGTCACAGCCCACTGCCAGCATCACAACCAAGTCACAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR TCA 90 bp | GCTGTGGTAGCAGGCAGAGAAGGCTCACTGGGGAATGGATCACAGTaGTGTCTATCAAAGGTGAAGGATGAGTTCATAGCTGCTAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: AVVAGREGSLGNGSQ*CLSKVKDEFIAASA Trigger: AGCGCTAGCAGCTATGAACTCATCCTTCACCTTTGATAGACATCACTGTGATCCATTCCCCAGTGAGCCTTCTCTGCCTGCTACCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR TCA 90 bp | CAGCAGAAAATAAAGACACAGCAGATGGACTTAGGTCTGAGCATGTaGGGAGAGATACGATCAGAGCCTGGGTGGATTCAGGAGCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: QQKIKTQQMDLGLSM*GEIRSEPGWIQEPW Trigger: CCACGGCTCCTGAATCCACCCAGGCTCTGATCGTATCTCTCCTCACATGCTCAGACCTAAGTCCATCTGCTGTGTCTTTATTTTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR TCA 90 bp | TGTCCTGAACCGTGTTTCTTTATAGTGCCCACGAGGTGGCAGCACTaGGCAGCAAGTCCTTGCAGGAAGATGGAACCAGTCAAGACTTCT | + |
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Preference number: 1 (lower is better) Translates to: CPEPCFFIVPTRWQH*AASPCRKMEPVKTS Trigger: AGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAGTGCTGCCACCTCGTGGGCACTATAAAGAAACACGGTTCAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR GCA 90 bp | AAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGAGGTGCTaGTTTCTGGCTTGCTCAGCTTGCTTTCTCATAGAACTCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: KNPKAGADAEAKKRC*FLACSACFLIELRT Trigger: AGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CCA 90 bp | AACTGCAGCAGAGATGATCAAACTGTAGGCTGTGTGAACATCACCTaGGAGGGCCAGGTCCGGAGGCTCTTAGTTGATGCTGACCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: NCSRDDQTVGCVNIT*EGQVRRLLVDADLK Trigger: TTTTAGGTCAGCATCAACTAAGAGCCTCCGGACCTGGCCCTCCCAGGTGATGTTCACACAGCCTACAGTTTGATCATCTCTGCTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR TCA 90 bp | TTCTGGTTTCCCGCTGTCTATCCTCATGCAGCCTTTCCCATAAGCTaGCACCCAGCACACACCCCTTTGGTTGGTATTTTAGTCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: FWFPAVYPHAAFPIS*HPAHTPLVGILVSP Trigger: AGGAGAGACTAAAATACCAACCAAAGGGGTGTGTGCTGGGTGTCAGCTTATGGGAAAGGCTGCATGAGGATAGACAGCGGGAAACCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR GCA 90 bp | TCCTGGGTCCACCAATCCTTGGATGGAGTTAAAGAGAGATCCATATaGCCCCACGGCCACAAGGATTTCTTCGTTTGGATCAATTTGACG | + |
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Preference number: 1 (lower is better) Translates to: SWVHQSLDGVKERSI*PHGHKDFFVWINLT Trigger: CGTCAAATTGATCCAAACGAAGAAATCCTTGTGGCCGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR CCA 90 bp | AAAGGCACCATAATTATCACTTCATCTCCTGGGTCCACCAATCCTTaGATGGAGTTAAAGAGAGATCCATATGCCCCCACGGCCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: KGTIIITSSPGSTNP*MELKRDPYAPTATR Trigger: CCTTGTGGCCGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATAATTATGGTGCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR CCA 90 bp | TGTCTTGCCAGCACTTCCTATTGTTATTGTTCTCTCCCACATACCTaGAAGAGTGGCTATTTTTACGTGCGTATGTCCAGTATAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: CLASTSYCYCSLPHT*KSGYFYVRMSSIDK Trigger: CTTGTCTATACTGGACATACGCACGTAAAAATAGCCACTCTTCCAGGTATGTGGGAGAGAACAATAACAATAGGAAGTGCTGGCAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR TCA 90 bp | GGGGGTTGTGTGGAGTATTTAATATTATGGCTTTCGTTTTGGAACTaGATTTACTTTCCAGTTCTCGAGGATCGAATGTCCAGTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GGCVEYLILWLSFWN*IYFPVLEDRMSSQS Trigger: GCTCTGACTGGACATTCGATCCTCGAGAACTGGAAAGTAAATTCAGTTCCAAAACGAAAGCCATAATATTAAATACTCCACACAACCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR GCA 90 bp | AACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGATGTCCCCTCCCCCTCCCAAGTaGTGGGTTTGCAGGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: NLPHAIPNLCGPEGSGMSPPPPK*WVCRPC Trigger: GCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGG...GGACATCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACAAGCAGGTGGACCCTGCTGTGACTTGGTTGTGATGCTGGCAGTGGGCCAGGTGGAGCAGGGGTaGACATTGGCAGAGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: LPQAGGPCCDLVVMLAVGQVEQG*TLAEVT Trigger: TGTTACCTCTGCCAATGTTCACCCCTGCTCCACCTG...GCCCACTGCCAGCATCACAACCAAGTCACAGCAGGGTCCACCTGCTTGTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR TCA 90 bp | CCAACAACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGAAGGTGGACCCTGCTGTaGCTTGGTTGTGATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PTTFPTPSPTCVAQKVQGRWTLL*LGCDAG Trigger: GCCAGCATCACAACCAAGTCACAGCAGGGTCCACCT...TCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTTGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CAA 90 bp | GGACCGAGAGGTGAACCTGGCCAACCTCCTGTGAGGGCTTGTAGGTaGCCAGACTTTACACTGAATGAGCCTGCAGTCCTCACAGACGAG | + |
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Preference number: 2 (lower is better) Translates to: GPRGEPGQPPVRACR*PDFTLNEPAVLTDE Trigger: CTCGTCTGTGAGGACTGCAGGCTCATTCAGTGTAAAGTCTGGCAACCTACAAGCCCTCACAGGAGGTTGGCCAGGTTCACCTCTCGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CAA 90 bp | GCTGATGCACAGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTaGCAGCTCCTGTCTGGTATACACCTTGCCGAGGGGGTTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ADAQSVVLDAKVSND*QLLSGIHLAEGVVW Trigger: CCACACAACCCCCTCGGCAAGGTGTATACCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTGTGCATCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGAGGCTGTGACCCGGGATaGGAAGGGGGTGGATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: NSSRARIRRQELMQRPRRGCDPG*EGGGFS Trigger: AGAAAATCCACCCCCTTCTCATCCCGGGTCACAGCC...TCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR TCA 90 bp | ATCGCTGATGCACAGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTTGCAGACTCATCCTCAGAGGTaGGAGCCATGGGCTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: IADAQSVVLDAKVSNDLQTHPQR*EPWAPE Trigger: CTCTGGAGCCCATGGCTCTCACCTCTGAGGATGAGT...CTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTGTGCATCAGCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR CAA 90 bp | TTTCTTTATAGTGCCCACGAGGTGGCAGCACTGAGCAGCAAGTCCTaGCAGGAAGATGGAACCAGTCAAGACTTCTGGCTGTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: FLYSAHEVAALSSKS*QEDGTSQDFWLFQA Trigger: GGCCTGGAACAGCCAGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAGTGCTGCCACCTCGTGGGCACTATAAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTTTCTGGCTTGCTCAGCTTGCTTTCTCATAGAACTCAGGACTACCAGCAGCTGGTCCTATTGCTaGGTCCCCTGTCAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CCFLACSACFLIELRTTSSWSYC*VPCQPP Trigger: AGGAGGCTGACAGGGGACTCAGCAATAGGACCAGCT...GCTGGTAGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGTTCCAGGCCCTGAAGATTTCTTCGGCAGCATCCAGTGTGCTGTCTTTTCCAGCCAGTCACACTaGATGTCTTGCCAGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: LAVPGPEDFFGSIQCAVFSSQSH*MSCQHF Trigger: GAAGTGCTGGCAAGACATTCAGTGTGACTGGCTGGA...AAAGACAGCACACTGGATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGTTCCAGGCCCTGAAGATTTCTTCGGCAGCATCCAGTGTGCTGTCTTTCATAAACCTCATCGCTaGTGCACAGAGTGTCGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LAVPGPEDFFGSIQCAVFHKPHR*CTECRA Trigger: AGCACGACACTCTGTGCATCAGCGATGAGGTTTATG...AAAGACAGCACACTGGATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCAGCACTGAGCAGCAAGTCCTTGCAGGAAGATGGAACCAGTCAAGACTTAAATGCTTTATCAGGTaGGCAGGGCCAATGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GGSTEQQVLAGRWNQSRLKCFIR*AGPMLQ Trigger: CTGGAGCATTGGCCCTGCTCACCTGATAAAGCATTT...AAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAGTGCTGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGTTCCAGGCCCTGAAGATTTCTTCGGCAGCATCCAGTGTGCTGTCTTTGGTCATCCATGCGCTTaGTATCGATCCAAAACGCCT | + |
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Preference number: 2 (lower is better) Translates to: LAVPGPEDFFGSIQCAVFGHPCA*YRSKTP Trigger: AGGCGTTTTGGATCGATATCAAGCGCATGGATGACC...AAAGACAGCACACTGGATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAATAGGAATCATACTGAGAGCTCTGGGAACTGCAGCAGAGATGATCAAACTGGCCAAGGGAGTGGGTaGTTCAGGTGGAGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PNRNHTESSGNCSRDDQTGQGSG*FRWSRG Trigger: ACCCCTGCTCCACCTGAACCACCCACTCCCTTGGCC...AGTTTGATCATCTCTGCTGCAGTTCCCAGAGCTCTCAGTATGATTCCTATTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGACTATAGCTTGTGTCAAGTTGACATAAAACCAACCAGCACAGGCACGTGTGTGAACATCACCTaGGAGGGCCAGGTCCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TGDYSLCQVDIKPTSTGTCVNIT*EGQVRR Trigger: CCTCCGGACCTGGCCCTCCCAGGTGATGTTCACACA...CGTGCCTGTGCTGGTTGGTTTTATGTCAACTTGACACAAGCTATAGTCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | CCAACAACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGAGGGATGAGAAGGGGGTaGATTTTCTTTCTTATCACA | + |
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Preference number: 2 (lower is better) Translates to: PTTFPTPSPTCVAQKVQGGMRRG*IFFLIT Trigger: TGTGATAAGAAAGAAAATCCACCCCCTTCTCATCCC...TCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGATGTCCTTTGTCAAGAAAGGATaGACAAATGCTGAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: NLPHAIPNLCGPEGSGMSFVKKG*TNAEPE Trigger: CTCTGGCTCAGCATTTGTCCATCCTTTCTTGACAAA...GGACATCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGAGACTCAGTCAGAGCCTAAGCTGGTCCTATTGCTGAGTCCCCTGTCAGCCCTTCCCCTGACCTaGAACATTCTTAAGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: KLETQSEPKLVLLLSPLSALPLT*NILKIS Trigger: GGAGATCTTAAGAATGTTCCAGGTCAGGGGAAGGGC...TGACAGGGGACTCAGCAATAGGACCAGCTTAGGCTCTGACTGAGTCTCCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR TCA 90 bp | ATCACAGAGCATGCTAGCAATTGCTGCTGTGGTAGCAGGCAGAGAAGGCTCACTAGGGCCACAAAAGCATaGGCCAGAAGACAGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: ITEHASNCCCGSRQRRLTRATKA*ARRQLV Trigger: AACCAACTGTCTTCTGGCTCATGCTTTTGTGGCCCT...AGTGAGCCTTCTCTGCCTGCTACCACAGCAGCAATTGCTAGCATGCTCTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | CCTAATAGGAATCATACTGAGAGCTCTGGGAACTGCAGCAGAGATGATCAAACTGTGTGGCCAAGGGAGTaGGTGGTTCAGGTGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PNRNHTESSGNCSRDDQTVWPRE*VVQVEQ Trigger: CTGCTCCACCTGAACCACCCACTCCCTTGGCCACAC...AGTTTGATCATCTCTGCTGCAGTTCCCAGAGCTCTCAGTATGATTCCTATTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | ATCACAGAGCATGCTAGCAATTGCTGCTGTGGTAGCAGGCAGAGAAGGCTCACTGATAGTTTCAAGGTGTaGCCAAGGGAGTGGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: ITEHASNCCCGSRQRRLTDSFKV*PREWVV Trigger: AACCACCCACTCCCTTGGCCACACCTTGAAACTATC...AGTGAGCCTTCTCTGCCTGCTACCACAGCAGCAATTGCTAGCATGCTCTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGATGTCCCTATGGACCAGTTTCTaGGAAATATTGGGTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: NLPHAIPNLCGPEGSGMSLWTSF*EILGLE Trigger: TTCCAAACCCAATATTTCCCAGAAACTGGTCCATAG...GGACATCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTTTCTGGCTTGCTCAGCTTGCTTTCTCATAGAACTCAGGACTACCAGCTCGACCCTCTGGTTCTaGTTTCCCGCTGTCTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: CCFLACSACFLIELRTTSSTLWF*FPAVYP Trigger: AGGATAGACAGCGGGAAACCAGAACCAGAGGGTCGA...GCTGGTAGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR-3UTR GCA 90 bp | ATCGCTGATGCACAGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTTGCAGCAGAGCTTTCACAAGTaGTGGATGACCCTTGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: IADAQSVVLDAKVSNDLQQSFHK*WMTLDV Trigger: GACATCAAGGGTCATCCAGCACTTGTGAAAGCTCTG...CTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTGTGCATCAGCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACGGTCTGTAAATGCTTTATCAGGTGAGCAGGGCCAATGCTCCAGCCGAGCTTATCACTTCATCTCCTaGGTCCACCAATCCTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ERSVNALSGEQGQCSSRAYHFIS*VHQSLD Trigger: ATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATA...AGCTCGGCTGGAGCATTGGCCCTGCTCACCTGATAAAGCATTTACAGACCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGAACAGGGCCACAAAAGCATGAGCCAGAAGACAGTTGGTTATATATAGAGTGGGTTTGCAGGCCATaGTGCACTTGGTGCAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: EGTGPQKHEPEDSWLYIEWVCRP*CTWCSN Trigger: GTTACTGCACCAAGTGCAGCATGGCCTGCAAACCCA...CTCTATATATAACCAACTGTCTTCTGGCTCATGCTTTTGTGGCCCTGTTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR-3UTR GCA 90 bp | CCTAATAGGAATCATACTGAGAGCTCTGGGAACTGCAGCAGAGATGATCAAACTATGACCTTGAACTCCTaGCTCCCCCTCCCAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PNRNHTESSGNCSRDDQTMTLNS*LPLPSA Trigger: AGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGTCAT...AGTTTGATCATCTCTGCTGCAGTTCCCAGAGCTCTCAGTATGATTCCTATTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 90 bp | AAAAGGCACCATAATTATCACTTCATCTCCTGGGTCCACCAATCCTaGGATGGAGTTAAAGAGAGATCCATATGCCCCCACGGCCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KRHHNYHFISWVHQS*DGVKERSICPHGHK Trigger: CTTGTGGCCGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATAATTATGGTGCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR CAA 90 bp | GCAATGACTTGCAGCTCCTGTCTGGTATACACCTTGCCGAGGGGGTaGTGTGGAGTATTTAATATTATGGCTTTCGTTTTGGAACTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: AMTCSSCLVYTLPRG*CGVFNIMAFVLELN Trigger: ATTCAGTTCCAAAACGAAAGCCATAATATTAAATACTCCACACAACCCCCTCGGCAAGGTGTATACCAGACAGGAGCTGCAAGTCATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCAGAAACAGGAATGGCTGTCAGTTTCTTATGTTTCGTCATCCACTTCACGGCCATTCTCACCATaGGCTCATAACAGTCGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RRQKQEWLSVSYVSSSTSRPFSP*AHNSRK Trigger: TTTACGACTGTTATGAGCCCATGGTGAGAATGGCCG...TGAAGTGGATGACGAAACATAAGAAACTGACAGCCATTCCTGTTTCTGCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGCTATTTTTACGTGCGTATGTCCAGTATAGACAAGCCATTCATAAACCTCTGGAACAGTAGTCAATaGACAGCCAAAACGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: SGYFYVRMSSIDKPFINLWNSSQ*TAKTGL Trigger: CAGTCCCGTTTTGGCTGTTCATTGACTACTGTTCCA...GAGGTTTATGAATGGCTTGTCTATACTGGACATACGCACGTAAAAATAGCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR CAA 90 bp | TTGCCGAGGGGGTTGTGTGGAGTATTTAATATTATGGCTTTCGTTTaGGAACTGAATTTACTTTCCAGTTCTCGAGGATCGAATGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPRGLCGVFNIMAFV*ELNLLSSSRGSNVQ Trigger: CTGGACATTCGATCCTCGAGAACTGGAAAGTAAATTCAGTTCCAAAACGAAAGCCATAATATTAAATACTCCACACAACCCCCTCGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGTGGCTATTTTTACGTGCGTATGTCCAGTATAGACAAGCCATTCATAAACAATAAACACAGGCACTaGTCCGGCCATTCTCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSGYFYVRMSSIDKPFINNKHRH*SGHSHH Trigger: ATGGTGAGAATGGCCGGAGCAGTGCCTGTGTTTATT...GTTTATGAATGGCTTGTCTATACTGGACATACGCACGTAAAAATAGCCACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGAGATCCATATGCCCCCACGGCCACAAGGATTTCTTCGTTTGGATCAATGGACTGAAAAATTCCTaGAAATTAGAGAAGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KERSICPHGHKDFFVWINGLKNS*KLEKTH Trigger: ATGAGTCTTCTCTAATTTCCAGGAATTTTTCAGTCC...ATTGATCCAAACGAAGAAATCCTTGTGGCCGTGGGGGCATATGGATCTCTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR TCA 72 bp | CAGGGGGTGGAAAACACAGGCTGCCCACGTGGACCGTaGGGCCACCCAAGTCACAGCAGCCCTTGGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGVENTGCPRGP*GHPSHSSPWKR Trigger: TCTCTTCCAAGGGCTGCTGTGACTTGGGTGGCCTCACGGTCCACGTGGGCAGCCTGTGTTTTCCACCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | TCCCACAAGCAGGTGGACCCTGCTGTGACTTGGTTGTaGTGCTGGCAGTGGGCTGTGACCCGGGATGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHKQVDPAVTWL*CWQWAVTRDEK Trigger: CTTCTCATCCCGGGTCACAGCCCACTGCCAGCATCACAACCAAGTCACAGCAGGGTCCACCTGCTTGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | CTGGTCCTATTGCTGAGTCCCCTGTCAGCCTCCTCCTaGGGCAGATTGAAGACCGTGGACACCAGCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLLLSPLSASS*GRLKTVDTSPS Trigger: GGAAGGGCTGGTGTCCACGGTCTTCAATCTGCCTCAGGAGGAGGCTGACAGGGGACTCAGCAATAGGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | CTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTaGAGGCCATGCTGCACTTGGTGCAGTAACGGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: LELLPPPPKCWV*RPCCTWCSNGD Trigger: ATCGCCGTTACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR GCA 72 bp | GTGGATGACCTTGAACTCCTGCCTCCCCCTCCCAAGTaGTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VDDLELLPPPPK*WVCRPCCTWCS Trigger: ACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGTCATCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR CCA 72 bp | GGTGAAACGGCCCCGACTGATGATAGTTTCAAGGTGTaGCCAAGGGAGTGGGTGGTTCAGGTGGAGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GETAPTDDSFKV*PREWVVQVEQG Trigger: CCCCTGCTCCACCTGAACCACCCACTCCCTTGGCCACACCTTGAAACTATCATCAGTCGGGGCCGTTTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | GAGATACGATCAGAGCCTGGGTGGATTCAGGAGCCGTaGCAAATCCAGGGCTGTAGAGAGCAGGCTCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EIRSEPGWIQEP*QIQGCREQAQD Trigger: GTCTTGAGCCTGCTCTCTACAGCCCTGGATTTGCCACGGCTCCTGAATCCACCCAGGCTCTGATCGTATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | AGGTCTGAGCATGTGAGGAGAGATACGATCAGAGCCTaGGTGGATTCAGGAGCCGTGGCAAATCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSEHVRRDTIRA*VDSGAVANPGL Trigger: CAGCCCTGGATTTGCCACGGCTCCTGAATCCACCCAGGCTCTGATCGTATCTCTCCTCACATGCTCAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | GACCCTCTGGTTCTGGTTTCCCGCTGTCTATCCTCATaGAGCCTTTCCCATAAGCTGACACCCAGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: DPLVLVSRCLSS*SLSHKLTPSTH Trigger: GTGTGTGCTGGGTGTCAGCTTATGGGAAAGGCTGCATGAGGATAGACAGCGGGAAACCAGAACCAGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | AGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTTaGAGCTCCTGTCTGGTATACACCTTGCCGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RVSCLTQRSAMT*SSCLVYTLPRG Trigger: CCCCCTCGGCAAGGTGTATACCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR TCA 72 bp | AGGCAGATTGAAGACCGTGGACACCAGCCCTTCCCCTaGCCTGGAACATTCTTAAGATCTCCACAAGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: RQIEDRGHQPFP*PGTFLRSPQAR Trigger: GCGAGCTTGTGGAGATCTTAAGAATGTTCCAGGTCAGGGGAAGGGCTGGTGTCCACGGTCTTCAATCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | GCCAAGAAGAGGTGCTGCTTTCTGGCTTGCTCAGCTTaGTTTCTCATAGAACTCAGGACTACCAGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AKKRCCFLACSA*FLIELRTTSPG Trigger: CCCTGGGCTGGTAGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | TTGGTTGTGATGCTGGCAGTGGGCTGTGACCCGGGATaGGAAGGGGGTGGATTTTCTTTCTTATCACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVVMLAVGCDPG*EGGGFSFLSQS Trigger: GCTCTGTGATAAGAAAGAAAATCCACCCCCTTCTCATCCCGGGTCACAGCCCACTGCCAGCATCACAACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | AGAGATGATCAAACTGTAGGCTGTGTGAACATCACCTaGGAGGGCCAGGTCCGGAGGCTCTTAGTTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: RDDQTVGCVNIT*EGQVRRLLVDA Trigger: AGCATCAACTAAGAGCCTCCGGACCTGGCCCTCCCAGGTGATGTTCACACAGCCTACAGTTTGATCATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | AACCAACAACCTTCCCCACGCCATCCCCAACTTGTGTaGCCCAGAAGGTTCAGGGATGTCCTTTGTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NQQPSPRHPQLV*PRRFRDVLCQE Trigger: TTCTTGACAAAGGACATCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTTGTTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGACTATAGCTTGTGTCAAGTTGACATAAAACCAACCAGCACAGGCACGTCACTGTGGATGACCTaGAACTCCTGCCTCCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGDYSLCQVDIKPTSTGTSLWMT*NSCLPL Trigger: GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGA...CGTGCCTGTGCTGGTTGGTTTTATGTCAACTTGACACAAGCTATAGTCACCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTCATCCATGCGCTTGATATCGATCCAAAACGCCTCGGCCAAGGCTGCCTGCACTTCCTATTGTTATaGTTCTCTCCCACATACCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVIHALDIDPKRLGQGCLHFLLL*FSPTYL Trigger: CAGGTATGTGGGAGAGAACAATAACAATAGGAAGTG...CAGGCAGCCTTGGCCGAGGCGTTTTGGATCGATATCAAGCGCATGGATGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR TCA 72 bp | CCCGCTGTCTATCCTCATGCAGCCTTTCCCATAAGCTaGCACCCAGCACACACCCCTTTGGTTGGTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PAVYPHAAFPIS*HPAHTPLVGIL Trigger: TAAAATACCAACCAAAGGGGTGTGTGCTGGGTGTCAGCTTATGGGAAAGGCTGCATGAGGATAGACAGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | GGCCAATGCTCCAGCCGAGCTTCCAGCCAGTCACACTaGATGTCTTGCCAGCACTTCCTATTGTTATTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GQCSSRASSQSH*MSCQHFLLLLF Trigger: GAACAATAACAATAGGAAGTGCTGGCAAGACATTCAGTGTGACTGGCTGGAAGCTCGGCTGGAGCATTGGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR CCA 72 bp | AAGTCCTTGCAGGAAGATGGAACCAGTCAAGACTTCTaGCTGTTCCAGGCCCTGAAGATTTCTTCGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSLQEDGTSQDF*LFQALKISSAA Trigger: TGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCCAGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGATTTATTTCCGTCCTTTaGTGTCTCCCACAAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSSRARIRRQELMQRPRRFISVL*CLPQAG Trigger: ACCTGCTTGTGGGAGACACAAAAGGACGGAAATAAA...TCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | ACTACCAGCCCAGGGATGGCACCACCCACAATGGACTaGGTCCTTTCTCATCAATCACTAAGAAAATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TTSPGMAPPTMD*VLSHQSLRKCS Trigger: GGAACATTTTCTTAGTGATTGATGAGAAAGGACGCAGTCCATTGTGGGTGGTGCCATCCCTGGGCTGGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | TCCCATAAGCTGACACCCAGCACACACCCCTTTGGTTaGTATTTTAGTCTCTCCTGGCCAAGGAAGGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: SHKLTPSTHPFG*YFSLSWPRKGY Trigger: ATATCCCTTCCTTGGCCAGGAGAGACTAAAATACCAACCAAAGGGGTGTGTGCTGGGTGTCAGCTTATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | GCAGGCAGAGAAGGCTCACTGGGGAATGGATCACAGTaGTGTCTATCAAAGGTGAAGGATGAGTTCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGREGSLGNGSQ*CLSKVKDEFIA Trigger: AGCTATGAACTCATCCTTCACCTTTGATAGACATCACTGTGATCCATTCCCCAGTGAGCCTTCTCTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | ATAAAGACACAGCAGATGGACTTAGGTCTGAGCATGTaGGGAGAGATACGATCAGAGCCTGGGTGGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IKTQQMDLGLSM*GEIRSEPGWIQ Trigger: CTGAATCCACCCAGGCTCTGATCGTATCTCTCCTCACATGCTCAGACCTAAGTCCATCTGCTGTGTCTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | TGGATTTTCTTTCTTATCACAGAGCATGCTAGCAATTaGTGCTGTGGTAGCAGGCAGAGAAGGCTCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WIFFLITEHASN*CCGSRQRRLTG Trigger: CCCAGTGAGCCTTCTCTGCCTGCTACCACAGCAGCAATTGCTAGCATGCTCTGTGATAAGAAAGAAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR GCA 72 bp | CACCAATCCTTGGATGGAGTTAAAGAGAGATCCATATaGCCCCACGGCCACAAGGATTTCTTCGTTTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: HQSLDGVKERSI*PHGHKDFFVWI Trigger: GATCCAAACGAAGAAATCCTTGTGGCCGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR TCA 72 bp | AGCAGGACAGAGCTTTCACAAGTGCTGGATGACCCTTaGTGTCCTGAGAGCTCATTTTGGAACAGTAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRTELSQVLDDP*CPESSFWNSSQ Trigger: TTGACTACTGTTCCAAAATGAGCTCTCAGGACATCAAGGGTCATCCAGCACTTGTGAAAGCTCTGTCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR GCA 72 bp | ATTTTCTTTCTTATCACAGAGCATGCTAGCAATTGCTaGTGTGGTAGCAGGCAGAGAAGGCTCACTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IFFLITEHASNC*CGSRQRRLTGE Trigger: TTCCCCAGTGAGCCTTCTCTGCCTGCTACCACAGCAGCAATTGCTAGCATGCTCTGTGATAAGAAAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR TCA 72 bp | TTATTTGGCTTACACTTCCACATAGCTGTTCATCACTaGAGGAAGTCAGGACTGGAACTCAAGCAGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFGLHFHIAVHH*RKSGLELKQGK Trigger: CTTGCCCTGCTTGAGTTCCAGTCCTGACTTCCTTCAGTGATGAACAGCTATGTGGAAGTGTAAGCCAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | CGGAGGCTCTTAGTTGATGCTGACCTAAAAGAGCTATaGACCAGTTTCTGGGAAATATTGGGTTTGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RRLLVDADLKEL*TSFWEILGLEL Trigger: CAGTTCCAAACCCAATATTTCCCAGAAACTGGTCCATAGCTCTTTTAGGTCAGCATCAACTAAGAGCCTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | AGCACACACCCCTTTGGTTGGTATTTTAGTCTCTCCTaGCCAAGGAAGGGATATAAACAAGTACAAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: STHPFGWYFSLS*PRKGYKQVQGP Trigger: AGGACCTTGTACTTGTTTATATCCCTTCCTTGGCCAGGAGAGACTAAAATACCAACCAAAGGGGTGTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | ATAATTATCACTTCATCTCCTGGGTCCACCAATCCTTaGATGGAGTTAAAGAGAGATCCATATGCCCCCACG | + |
|
Preference number: 3 (lower is better) Translates to: IIITSSPGSTNP*MELKRDPYAPT Trigger: CGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATAATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR CCA 72 bp | TTTAATAAAGCAAAACCGCACCAGCTTCTCAAAGTGTaGTTTAGACTTGGAGTCGCAGAAGGCAGAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FNKAKPHQLLKV*FRLGVAEGRNR Trigger: CCTGTTTCTGCCTTCTGCGACTCCAAGTCTAAACCACACTTTGAGAAGCTGGTGCGGTTTTGCTTTATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR TCA 72 bp | AGGGATGTCCTTTGTCAAGAAAGGATGGACAAATGCTaGGCCAGAGACATATATCACAGGCGATTTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RDVLCQERMDKC*ARDIYHRRFIS Trigger: GGAAATAAATCGCCTGTGATATATGTCTCTGGCTCAGCATTTGTCCATCCTTTCTTGACAAAGGACATCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CCA 72 bp | GTCGTAAAAAGGCACCATAATTATCACTTCATCTCCTaGGTCCACCAATCCTTGGATGGAGTTAAAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VVKRHHNYHFIS*VHQSLDGVKER Trigger: TCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATAATTATGGTGCCTTTTTACGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| 3UTR CCA 72 bp | GGAACAGGGCCACAAAAGCATGAGCCAGAAGACAGTTaGTTATATATAGAGAGGATGTGTTTACTATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGPQKHEPEDS*LYIERMCLLSQ Trigger: TTGAGATAGTAAACACATCCTCTCTATATATAACCAACTGTCTTCTGGCTCATGCTTTTGTGGCCCTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAACGGACCATCCGATCTCTCTTTACTTCTAATTCCTTTGGCAGAGAATTATGCCAGCACTTCCTATaGTTATTGTTCTCTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SKRTIRSLFTSNSFGRELCQHFL*LLFSPT Trigger: TGTGGGAGAGAACAATAACAATAGGAAGTGCTGGCA...TAATTCTCTGCCAAAGGAATTAGAAGTAAAGAGAGATCGGATGGTCCGTTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTTGCAGCCAAGGGAGATaGGTCTCCTCTGGGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPPKCWVCRPCCTWCSCSQGR*VSSGPK Trigger: TTTTGGCCCAGAGGAGACTCATCTCCCTTGGCTGCA...ACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
||
| 3UTR CAA 72 bp | TTGTGTCTCCCACAAGCAGGTGGACCCTGCTGTGACTaGGTTGTGATGCTGGCAGTGGGCTGTGACCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCLPQAGGPCCD*VVMLAVGCDPG Trigger: TCCCGGGTCACAGCCCACTGCCAGCATCACAACCAAGTCACAGCAGGGTCCACCTGCTTGTGGGAGACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR TCA 90 bp | AACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTCGCAAAGGTCAGCAATaGCTTGCAGCTCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSCLPLPSAGFAGHAALGRKGQQ*LAAPVW Trigger: CCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCG...ACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTATCCAGCCAGTCACACTaGATGTCTTGCCAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLPSAGFAGHAALGAVSSQSH*MSCQHF Trigger: GAAGTGCTGGCAAGACATTCAGTGTGACTGGCTGGA...TACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCAAAATGCTTTATCAGGTaGGCAGGGCCAATGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLNSCLPLPSAGFAGHAAKCFIR*AGPMLQ Trigger: CTGGAGCATTGGCCCTGCTCACCTGATAAAGCATTT...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCAGGTCATCCATGCGCTTaGTATCGATCCAAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSCLPLPSAGFAGHAAGHPCA*YRSKTP Trigger: AGGCGTTTTGGATCGATATCAAGCGCATGGATGACC...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTAATAAACACAGGCACTaGTCCGGCCATTCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPPKCWVCRPCCTWCSNKHRH*SGHSHH Trigger: ATGGTGAGAATGGCCGGAGCAGTGCCTGTGTTTATT...ACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTAGGTCAGCAATGACTTaGAGCTCCTGTCTGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPPKCWVCRPCCTWCSRSAMT*SSCLVY Trigger: GTATACCAGACAGGAGCTGCAAGTCATTGCTGACCT...ACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCAGCAGCCCAGGTGCAGGCCTAGAACTTCAACCCCAGGGTGGAGTCCTATGCACAGAGTGTCGTaGTTGACGCAAAGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAQQPRCRPRTSTPGWSPMHRVS*LTQRSA Trigger: TGCTGACCTTTGCGTCAAGCACGACACTCTGTGCAT...AGGACTCCACCCTGGGGTTGAAGTTCTAGGCCTGCACCTGGGCTGCTGAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | AGTGCCCACGAGGTGGCAGCACTGAGCAGCAAGTCCTaGCAGGAAGATGGAACCAGTCAAGACTTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAHEVAALSSKS*QEDGTSQDFWL Trigger: CAGCCAGAAGTCTTGACTGGTTCCATCTTCCTGCAAGGACTTGCTGCTCAGTGCTGCCACCTCGTGGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCATGTCTTTATGGGCTTTaGTCTGCAGCCAAGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSCLPLPSAGFAGHAACLYGL*SAAKGD Trigger: ATCTCCCTTGGCTGCAGATCAAAGCCCATAAAGACA...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACGGCCATTCTCACCATaGGCTCATAACAGTCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLNSCLPLPSAGFAGHAARPFSP*AHNSRK Trigger: TTTACGACTGTTATGAGCCCATGGTGAGAATGGCCG...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR CAA 72 bp | CATGACCCCCAGCTTACTATGTCACTGTGGATGACCTaGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HDPQLTMSLWMT*NSCLPLPSAGF Trigger: AAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR CAA 72 bp | GGTGAACCTGGCCAACCTCCTGTGAGGGCTTGTAGGTaGCCAGACTTTACACTGAATGAGCCTGCAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEPGQPPVRACR*PDFTLNEPAVL Trigger: GAGGACTGCAGGCTCATTCAGTGTAAAGTCTGGCAACCTACAAGCCCTCACAGGAGGTTGGCCAGGTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | CAGAGTGTCGTGCTTGACGCAAAGGTCAGCAATGACTaGCAGCTCCTGTCTGGTATACACCTTGCCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVLDAKVSND*QLLSGIHLAEG Trigger: CCCCTCGGCAAGGTGTATACCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCCATAAACCTCATCGCTaGTGCACAGAGTGTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLHKPHR*CTECRA Trigger: AGCACGACACTCTGTGCATCAGCGATGAGGTTTATG...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGATGTCCCAGAGCTTTCACAAGTaGTGGATGACCAAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLPHAIPNLCGPEGSGMSQSFHK*WMTKAS Trigger: AGAGGCTTTGGTCATCCAGCACTTGTGAAAGCTCTG...GGACATCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCCCATTTTGGCAGAAGTaGAGAGTCCGAGGACTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLPFWQK*RVRGLS Trigger: CGAAAGTCCTCGGACTCTGCACTTCTGCCAAAATGG...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACAGCTTCTCAAAGTGTaGTTTAGACTTGGAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNSCLPLPSAGFAGHAAQLLKV*FRLGVA Trigger: TGCGACTCCAAGTCTAAACCACACTTTGAGAAGCTG...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR CAA 72 bp | GGCCAAGAAGAGGTGCTGCTTTCTGGCTTGCTCAGCTaGCTTTCTCATAGAACTCAGGACTACCAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQEEVLLSGLLS*LSHRTQDYQPR Trigger: CCTGGGCTGGTAGTCCTGAGTTCTATGAGAAAGCAAGCTGAGCAAGCCAGAAAGCAGCACCTCTTCTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCAGCAGCCCAGGTGCAGGCCTAGAACTTCAACCCCAGGGTGGAGTCCTCTCTTCTTTTACGTATaGAGGAGGGGATATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CAQQPRCRPRTSTPGWSPLFFYV*RRGYIW Trigger: CCAGATATATCCCCTCCTTCATACGTAAAAGAAGAG...AGGACTCCACCCTGGGGTTGAAGTTCTAGGCCTGCACCTGGGCTGCTGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR TCA 90 bp | GAACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGAAATGCTTTATCAGGTaGGCAGGGCCAATGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELKQGKNPKAGADAEAKKKCFIR*AGPMLQ Trigger: CTGGAGCATTGGCCCTGCTCACCTGATAAAGCATTT...CTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | AACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTTCTCTCCCACATACCTaGAAGAGTGGCTATTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSCLPLPSAGFAGHAALGSLPHT*KSGYFY Trigger: GTAAAAATAGCCACTCTTCCAGGTATGTGGGAGAGA...ACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGTTCATAGCTGCTAGCGCTTACCTGAGTGTGCTCAGCAGCCCAGGTGCAAATAAACACAGGCACTaGTCCGGCCATTCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DEFIAASAYLSVLSSPGANKHRH*SGHSHH Trigger: ATGGTGAGAATGGCCGGAGCAGTGCCTGTGTTTATT...TGCACCTGGGCTGCTGAGCACACTCAGGTAAGCGCTAGCAGCTATGAACTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCAGCTTTCACAAGTGCTaGATGACCAAAGCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLSFHKC*MTKASC Trigger: ACAAGAGGCTTTGGTCATCCAGCACTTGTGAAAGCT...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGTCCTCACAGACGAGCTGCAGATGAGGTATGTGTTGGTTTTGTTTCTTGGCTGTTCCAGGCCCTaGAGATTTCTTCGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVLTDELQMRYVLVLFLGCSRP*RFLRQH Trigger: ATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCC...AAGAAACAAAACCAACACATACCTCATCTGCAGCTCGTCTGTGAGGACTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | CCAACTTGTGTGGCCCAGAAGGTTCAGGGATGTCCTTaGTCAAGAAAGGATGGACAAATGCTGAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTCVAQKVQGCP*SRKDGQMLSQR Trigger: TCTCTGGCTCAGCATTTGTCCATCCTTTCTTGACAAAGGACATCCCTGAACCTTCTGGGCCACACAAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | CAAAACCGCACCAGCTTCTCAAAGTGTGGTTTAGACTaGGAGTCGCAGAAGGCAGAAACAGGAATGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNRTSFSKCGLD*ESQKAETGMAV Trigger: GACAGCCATTCCTGTTTCTGCCTTCTGCGACTCCAAGTCTAAACCACACTTTGAGAAGCTGGTGCGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCACAAAAGCATGAGCCAGAAGACAGTTGGTTATATATAGAGAGGATGCGCAAAGGTCAGCAATaGCTTGCAGCTCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPQKHEPEDSWLYIERMRKGQQ*LAAPVW Trigger: CCAGACAGGAGCTGCAAGTCATTGCTGACCTTTGCG...CATCCTCTCTATATATAACCAACTGTCTTCTGGCTCATGCTTTTGTGGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGCACACACCCCTTTGGTTGGTATTTTAGTCTCTCCTGGCCAAGGAAGAGCTTTCACAAGTGCTaGATGACCAAAGCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSTHPFGWYFSLSWPRKSFHKC*MTKASC Trigger: ACAAGAGGCTTTGGTCATCCAGCACTTGTGAAAGCT...CTTCCTTGGCCAGGAGAGACTAAAATACCAACCAAAGGGGTGTGTGCTGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGGAACAGGGCCACAAAAGCATGAGCCAGAAGACAGTTGGTTATATTATCACTTCATCTCCTaGGTCCACCAATCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GREGTGPQKHEPEDSWLYYHFIS*VHQSLD Trigger: ATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATA...ATATAACCAACTGTCTTCTGGCTCATGCTTTTGTGGCCCTGTTCCCTCCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGAACTTCAACCCCAGGGTGGAGTCCTTATTTTTGACCAGCTAGGCAAGCAGCTTCTCAAAGTGTaGTTTAGACTTGGAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLELQPQGGVLIFDQLGKQLLKV*FRLGVA Trigger: TGCGACTCCAAGTCTAAACCACACTTTGAGAAGCTG...CTTGCCTAGCTGGTCAAAAATAAGGACTCCACCCTGGGGTTGAAGTTCTAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | AGAGACATATATCACAGGCGATTTATTTCCGTCCTTTaGTGTCTCCCACAAGCAGGTGGACCCTGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDIYHRRFISVL*CLPQAGGPCCD Trigger: GTCACAGCAGGGTCCACCTGCTTGTGGGAGACACAAAAGGACGGAAATAAATCGCCTGTGATATATGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR TCA 90 bp | GAACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGCTTTCGTTTTGGAACTaGATTTACTTTCCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELKQGKNPKAGADAEAKKLSFWN*IYFPVL Trigger: GAGAACTGGAAAGTAAATTCAGTTCCAAAACGAAAG...CTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGAGACTCAGTCAGAGCCTAAGCTGGTCCTATTGCTGAGTCCCCTGTCAAGGCAGAAACAGGAATaGCTGTCAGTTTCTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLETQSEPKLVLLLSPLSRQKQE*LSVSYV Trigger: AACATAAGAAACTGACAGCCATTCCTGTTTCTGCCT...TGACAGGGGACTCAGCAATAGGACCAGCTTAGGCTCTGACTGAGTCTCCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR TCA 90 bp | CAATCCTTGGATGGAGTTAAAGAGAGATCCATATGCCCCCACGGCCACAAGGATCTCTTCTTTTACGTATaGAGGAGGGGATATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLDGVKERSICPHGHKDLFFYV*RRGYIW Trigger: CCAGATATATCCCCTCCTTCATACGTAAAAGAAGAG...ATCCTTGTGGCCGTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAAGGCTGTTCCAGGCCCTaGAGATTTCTTCGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTEGCSRP*RFLRQH Trigger: ATGCTGCCGAAGAAATCTTCAGGGCCTGGAACAGCC...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | CCTAATAGGAATCATACTGAGAGCTCTGGGAACTGCAGCAGAGATGATCAAACTAGGTCAGCAATGACTTaGAGCTCCTGTCTGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PNRNHTESSGNCSRDDQTRSAMT*SSCLVY Trigger: GTATACCAGACAGGAGCTGCAAGTCATTGCTGACCT...AGTTTGATCATCTCTGCTGCAGTTCCCAGAGCTCTCAGTATGATTCCTATTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| 3UTR CAA 72 bp | CATAATTATCACTTCATCTCCTGGGTCCACCAATCCTaGGATGGAGTTAAAGAGAGATCCATATGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HNYHFISWVHQS*DGVKERSICPH Trigger: GTGGGGGCATATGGATCTCTCTTTAACTCCATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATAATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAATCCAGCCAGTCACACTaGATGTCTTGCCAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTESSQSH*MSCQHF Trigger: GAAGTGCTGGCAAGACATTCAGTGTGACTGGCTGGA...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR TCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATGGTCATCCATGCGCTTaGTATCGATCCAAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYGHPCA*YRSKTP Trigger: AGGCGTTTTGGATCGATATCAAGCGCATGGATGACC...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATATTCAACCCACACATTaGTGTCCAGGCCTTCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYIQPTH*CPGLRF Trigger: GAATCGAAGGCCTGGACAGCAATGTGTGGGTTGAAT...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 ENSMUST00000129775.8 |
||
| CDS-3UTR GCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATCAGAGCTTTCACAAGTaGTGGATGACCAAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYQSFHK*WMTKAS Trigger: AGAGGCTTTGGTCATCCAGCACTTGTGAAAGCTCTG...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAAATGCACAGAGTGTCGTaGTTGACGCAAAGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTEMHRVS*LTQRSA Trigger: TGCTGACCTTTGCGTCAAGCACGACACTCTGTGCAT...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
||
| 3UTR CAA 72 bp | GGAGGCATTTTCTCAATTGATACAGGTGACTATAGCTaGTGTCAAGTTGACATAAAACCAACCAGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGIFSIDTGDYS*CQVDIKPTSTG Trigger: GCCTGTGCTGGTTGGTTTTATGTCAACTTGACACAAGCTATAGTCACCTGTATCAATTGAGAAAATGCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAAATTCAACCCACACATTaGTGTCCAGGCCTTCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTEIQPTH*CPGLRF Trigger: GAATCGAAGGCCTGGACAGCAATGTGTGGGTTGAAT...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 ENSMUST00000129775.8 |
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| CDS-3UTR GCA 90 bp | AGTAAACGGACCATCCGATCTCTCTTTACTTCTAATTCCTTTGGCAGAGAATTAATTCAACCCACACATTaGTGTCCAGGCCTTCGATTC | + |
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Preference number: 4 (lower is better) Translates to: SKRTIRSLFTSNSFGRELIQPTH*CPGLRF Trigger: GAATCGAAGGCCTGGACAGCAATGTGTGGGTTGAAT...TAATTCTCTGCCAAAGGAATTAGAAGTAAAGAGAGATCGGATGGTCCGTTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| CDS-3UTR CCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATTATCACTTCATCTCCTaGGTCCACCAATCCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYYHFIS*VHQSLD Trigger: ATCCAAGGATTGGTGGACCCAGGAGATGAAGTGATA...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| 3UTR CAA 72 bp | TGCCTACAGTCCAATCTTACGGAGGCATTTTCTCAATaGATACAGGTGACTATAGCTTGTGTCAAGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: CLQSNLTEAFSQ*IQVTIACVKLT Trigger: TGTCAACTTGACACAAGCTATAGTCACCTGTATCAATTGAGAAAATGCCTCCGTAAGATTGGACTGTAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| 3UTR CAA 72 bp | CTTTCTCATCAATCACTAAGAAAATGTTCCACAGGCTaGCCTACAGTCCAATCTTACGGAGGCATTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSHQSLRKCSTG*PTVQSYGGIFS Trigger: TGAGAAAATGCCTCCGTAAGATTGGACTGTAGGCAAGCCTGTGGAACATTTTCTTAGTGATTGATGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATATTTCAAAGCCATTTTaGCAGAAGTGCAGAGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYISKPF*QKCRVR Trigger: TCGGACTCTGCACTTCTGCCAAAATGGCTTTGAAAT...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS-3UTR TCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAACTCTTCTTTTACGTATaGAGGAGGGGATATATCTGG | + |
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Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTELFFYV*RRGYIW Trigger: CCAGATATATCCCCTCCTTCATACGTAAAAGAAGAG...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 ENSMUST00000129775.8 |
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| CDS-3UTR CCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAATCTCTCCCACATACCTaGAAGAGTGGCTATTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTESLPHT*KSGYFY Trigger: GTAAAAATAGCCACTCTTCCAGGTATGTGGGAGAGA...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| 3UTR CAA 72 bp | ATCCATATGCCCCCACGGCCACAAGGATTTCTTCGTTaGGATCAATTTGACGTTGATAAATCTTTCCATATA | + |
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Preference number: 4 (lower is better) Translates to: IHMPPRPQGFLR*DQFDVDKSFHI Trigger: TATATGGAAAGATTTATCAACGTCAAATTGATCCAAACGAAGAAATCCTTGTGGCCGTGGGGGCATATGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| CDS-3UTR TCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATTTCGTTTGGCGTTTTTaGATTTCAAAGCCATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYFVWRF*ISKPFW Trigger: CCAAAATGGCTTTGAAATTCAAAAACGCCAAACGAA...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS-3UTR CCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAAAGGCAGAAACAGGAATaGCTGTCAGTTTCTTATGTT | + |
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Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTERQKQE*LSVSYV Trigger: AACATAAGAAACTGACAGCCATTCCTGTTTCTGCCT...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CCA 90 bp | GTACCGAACATGGTTAGGAACGGGGTTAACTTTGTAGACAATGGAAGTACTTATAGTAAATTGTCTTTATaGGCTTTGATCTGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VPNMVRNGVNFVDNGSTYSKLSL*ALICSQ Trigger: TTGGCTGCAGATCAAAGCCCATAAAGACAATTTACT...ATAAGTACTTCCATTGTCTACAAAGTTAACCCCGTTCCTAACCATGTTCGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS-3UTR TCA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAACTTTCGTTTTGGAACTaGATTTACTTTCCAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVEGTLMYSKRIKPECTELSFWN*IYFPVL Trigger: GAGAACTGGAAAGTAAATTCAGTTCCAAAACGAAAG...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | AACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGGGTCATCCATGCGCTaGATATCGATCCAAAACGCC | + |
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Preference number: 5 (lower is better) Translates to: NSCLPLPSAGFAGHAALGGSSMR*ISIQNA Trigger: GGCGTTTTGGATCGATATCAAGCGCATGGATGACCC...ACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | CTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTAAGGTCAGCAATGACTaGCAGCTCCTGTCTGGTATA | + |
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Preference number: 5 (lower is better) Translates to: LPPPPKCWVCRPCCTWCSKVSND*QLLSGI Trigger: TATACCAGACAGGAGCTGCAAGTCATTGCTGACCTT...ACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | CCAACAACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGAGGGTCATCCATGCGCTaGATATCGATCCAAAACGCC | + |
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Preference number: 5 (lower is better) Translates to: PTTFPTPSPTCVAQKVQGGSSMR*ISIQNA Trigger: GGCGTTTTGGATCGATATCAAGCGCATGGATGACCC...TCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | TGTGCTCAGCAGCCCAGGTGCAGGCCTAGAACTTCAACCCCAGGGTGGAGTCCTTATATCTGGAAAGCCTaGTCCAAGGTTCACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: CAQQPRCRPRTSTPGWSPYIWKA*SKVHHR Trigger: TCTGTGGTGAACCTTGGACAAGGCTTTCCAGATATA...AGGACTCCACCCTGGGGTTGAAGTTCTAGGCCTGCACCTGGGCTGCTGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCACTTGGTGCAGTATGCCAGCACTTCCTATaGTTATTGTTCTCTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: CLPLPSAGFAGHAALGAVCQHFL*LLFSPT Trigger: TGTGGGAGAGAACAATAACAATAGGAAGTGCTGGCA...TACTGCACCAAGTGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | ACCTTGAACTCCTGCCTCCCCCTCCCAAGTGCTGGGTTTGCAGGCCATGCTGCAAATTTCAAAGCCATTTaGGCAGAAGTGCAGAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: TLNSCLPLPSAGFAGHAANFKAI*AEVQSP Trigger: CGGACTCTGCACTTCTGCCAAAATGGCTTTGAAATT...TGCAGCATGGCCTGCAAACCCAGCACTTGGGAGGGGGAGGCAGGAGTTCAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | CCAACAACCTTCCCCACGCCATCCCCAACTTGTGTGGCCCAGAAGGTTCAGGGAACCTTGCCGAGGGGGTaGTGTGGAGTATTTAATATT | + |
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Preference number: 5 (lower is better) Translates to: PTTFPTPSPTCVAQKVQGTLPRG*CGVFNI Trigger: AATATTAAATACTCCACACAACCCCCTCGGCAAGGT...TCCCTGAACCTTCTGGGCCACACAAGTTGGGGATGGCGTGGGGAAGGTTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCAAGGTCAGCAATGACTaGCAGCTCCTGTCTGGTATA | + |
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Preference number: 5 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLKVSND*QLLSGI Trigger: TATACCAGACAGGAGCTGCAAGTCATTGCTGACCTT...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCGTCACACTGAATGTCTaGCCAGCACTTCCTATTGTT | + |
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Preference number: 5 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLVTLNV*PALPIV Trigger: AACAATAGGAAGTGCTGGCAAGACATTCAGTGTGAC...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | AACTCAAGCAGGGCAAGAATCCGAAGGCAGGAGCTGATGCAGAGGCCAAGAAGAGTCACACTGAATGTCTaGCCAGCACTTCCTATTGTT | + |
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Preference number: 5 (lower is better) Translates to: NSSRARIRRQELMQRPRRVTLNV*PALPIV Trigger: AACAATAGGAAGTGCTGGCAAGACATTCAGTGTGAC...TCTTCTTGGCCTCTGCATCAGCTCCTGCCTTCGGATTCTTGCCCTGCTTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCGATGACCAAAGCCTCTaGTGTATTGATTCATGTTAT | + |
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Preference number: 5 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLDDQSL*CIDSCY Trigger: ATAACATGAATCAATACACAAGAGGCTTTGGTCATC...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGCTTACTATGTCACTGTGGATGACCTTGAACTCCTGCCTCCCCCTCTCGAAGAAGAGTAAATaGTCTTTATGGGCTTTGATC | + |
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Preference number: 5 (lower is better) Translates to: DPQLTMSLWMTLNSCLPLSKKSK*SLWALI Trigger: GATCAAAGCCCATAAAGACAATTTACTCTTCTTCGA...GAGGGGGAGGCAGGAGTTCAAGGTCATCCACAGTGACATAGTAAGCTGGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS TCA 90 bp | GAGTCCGAGGACTTTCGAAGAAGAGTAAATTGTCTTTATGGGCTTTaGTCTGCAGCCAAGGGAGATGAGTCTCCTCTGGGCCAAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ESEDFRRRVNCLYGL*SAAKGDESPLGQKH Trigger: ATGCTTTTGGCCCAGAGGAGACTCATCTCCCTTGGCTGCAGATCAAAGCCCATAAAGACAATTTACTCTTCTTCGAAAGTCCTCGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | GGCCTAGAACTTCAACCCCAGGGTGGAGTCCTTATTTTTGACCAGCTAGGCAAGCACTTCCTATTGTTATaGTTCTCTCCCACATACCTG | + |
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Preference number: 5 (lower is better) Translates to: GLELQPQGGVLIFDQLGKHFLLL*FSPTYL Trigger: CAGGTATGTGGGAGAGAACAATAACAATAGGAAGTG...CTTGCCTAGCTGGTCAAAAATAAGGACTCCACCCTGGGGTTGAAGTTCTAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | AGTCCACTTCATCCCGTCAGTAGGTTTAGATCTCAGGGGAATAAACACAGGCACTATATCTGGAAAGCCTaGTCCAAGGTTCACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: SPLHPVSRFRSQGNKHRHYIWKA*SKVHHR Trigger: TCTGTGGTGAACCTTGGACAAGGCTTTCCAGATATA...GTGCCTGTGTTTATTCCCCTGAGATCTAAACCTACTGACGGGATGAAGTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129775.8 |
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| CDS-3UTR CAA 90 bp | ACACCCAGCACACACCCCTTTGGTTGGTATTTTAGTCTCTCCTGGCCAAGGAAGGATGACCAAAGCCTCTaGTGTATTGATTCATGTTAT | + |
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Preference number: 5 (lower is better) Translates to: TPSTHPFGWYFSLSWPRKDDQSL*CIDSCY Trigger: ATAACATGAATCAATACACAAGAGGCTTTGGTCATC...CTTCCTTGGCCAGGAGAGACTAAAATACCAACCAAAGGGGTGTGTGCTGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044392.11 |
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| CDS-3UTR CAA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAATATATCTGGAAAGCCTaGTCCAAGGTTCACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: TVEGTLMYSKRIKPECTEYIWKA*SKVHHR Trigger: TCTGTGGTGAACCTTGGACAAGGCTTTCCAGATATA...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 ENSMUST00000129775.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAAACCTTGCCGAGGGGGTaGTGTGGAGTATTTAATATT | + |
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Preference number: 5 (lower is better) Translates to: TVEGTLMYSKRIKPECTETLPRG*CGVFNI Trigger: AATATTAAATACTCCACACAACCCCCTCGGCAAGGT...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGGAAGGCACCTTAATGTATTCCAAACGAATAAAACCTGAATGTACCGAACACTTCCTATTGTTATaGTTCTCTCCCACATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVEGTLMYSKRIKPECTEHFLLL*FSPTYL Trigger: CAGGTATGTGGGAGAGAACAATAACAATAGGAAGTG...TTCGGTACATTCAGGTTTTATTCGTTTGGAATACATTAAGGTGCCTTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 |
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| CDS CAA 72 bp | GGATCCGCAGCCAACTTAGTAAATTCAACCCACACATaGCTGTCCAGGCCTTCGATTCGTTTGGCGTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GSAANLVNSTHT*LSRPSIRLAFL Trigger: CAAAAACGCCAAACGAATCGAAGGCCTGGACAGCAATGTGTGGGTTGAATTTACTAAGTTGGCTGCGGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044392.11 ENSMUST00000106218.8 ENSMUST00000129775.8 ENSMUST00000199519.5 |
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| CDS CAA 90 bp | TCAACCCACACATTGCTGTCCAGGCCTTCGATTCGTTTGGCGTTTTaGAATTTCAAAGCCATTTTGGCAGAAGTGCAGAGTCCGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: STHTLLSRPSIRLAF*NFKAILAEVQSPRT Trigger: AGTCCTCGGACTCTGCACTTCTGCCAAAATGGCTTTGAAATTCAAAAACGCCAAACGAATCGAAGGCCTGGACAGCAATGTGTGGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS CAA 72 bp | AAGTGCAGAGTCCGAGGACTTTCGAAGAAGAGTAAATaGTCTTTATGGGCTTTGATCTGCAGCCAAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: KCRVRGLSKKSK*SLWALICSQGR Trigger: TCTCCCTTGGCTGCAGATCAAAGCCCATAAAGACAATTTACTCTTCTTCGAAAGTCCTCGGACTCTGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS CAA 72 bp | ACATTGCTGTCCAGGCCTTCGATTCGTTTGGCGTTTTaGAATTTCAAAGCCATTTTGGCAGAAGTGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TLLSRPSIRLAF*NFKAILAEVQS Trigger: ACTCTGCACTTCTGCCAAAATGGCTTTGAAATTCAAAAACGCCAAACGAATCGAAGGCCTGGACAGCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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| CDS CAA 90 bp | TTAGTAAATTCAACCCACACATTGCTGTCCAGGCCTTCGATTCGTTaGGCGTTTTTGAATTTCAAAGCCATTTTGGCAGAAGTGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LVNSTHTLLSRPSIR*AFLNFKAILAEVQS Trigger: ACTCTGCACTTCTGCCAAAATGGCTTTGAAATTCAAAAACGCCAAACGAATCGAAGGCCTGGACAGCAATGTGTGGGTTGAATTTACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106218.8 |
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